Metagenome / Metatranscriptome Family F089142

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F089142
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	106 residues
Representative Sequence	MQFTTFVRKPFVVDAVEVTTENIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFRVYPGFFMTKMGENVRCYSRKIFKEQFMVQTDEIKPWVDFMAKSGDSQ
Number of Associated Samples	87
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.04 %
% of genes near scaffold ends (potentially truncated)	33.03 %
% of genes from short scaffolds (< 2000 bps)	71.56 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (74.312 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (18.349 % of family members)
Environment Ontology (ENVO)	Unclassified (27.523 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (32.110 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.23% β-sheet: 27.69% Coil/Unstructured: 53.08%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF11753	DUF3310	2.75
PF10926	DUF2800	2.75
PF05065	Phage_capsid	2.75
PF01464	SLT	1.83
PF01510	Amidase_2	1.83
PF03965	Penicillinase_R	0.92
PF05738	Cna_B	0.92
PF01391	Collagen	0.92
PF02371	Transposase_20	0.92
PF04860	Phage_portal	0.92
PF06737	Transglycosylas	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	2.75
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.92
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.92
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.16 %
Unclassified	root	N/A	12.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.31 %
Viruses	superkingdom	All Organisms → Viruses	12.84 %
Unclassified	root	N/A	12.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.31 %
Unclassified	root	N/A	12.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.01 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.83 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	66.97 %
Unclassified	root	N/A	12.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.01 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.83 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	66.97 %
Unclassified	root	N/A	12.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.01 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %

Name	Rank	Taxonomy	Distribution
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	66.06 %
Unclassified	root	N/A	12.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.01 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.83 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Patescibacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group	66.06 %
Unclassified	root	N/A	12.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.01 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.92 %

Name	Rank	Taxonomy	Distribution
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	66.06 %
Unclassified	root	N/A	12.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.01 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.83 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	66.06 %
Unclassified	root	N/A	12.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.01 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.83 %
Pedococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus	0.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	66.06 %
Unclassified	root	N/A	12.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.01 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.83 %
Pedococcus cremeus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus cremeus	0.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104523162	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	664	Open in IMG/M
3300004463\|Ga0063356_100922198	All Organisms → Viruses → Predicted Viral	1237	Open in IMG/M
3300004633\|Ga0066395_10000058	All Organisms → cellular organisms → Bacteria	37293	Open in IMG/M
3300004643\|Ga0062591_101437323	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	686	Open in IMG/M
3300005276\|Ga0065717_1003598	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1226	Open in IMG/M
3300005338\|Ga0068868_100003625	All Organisms → cellular organisms → Bacteria	10777	Open in IMG/M
3300005364\|Ga0070673_100279338	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1464	Open in IMG/M
3300005526\|Ga0073909_10000088	All Organisms → cellular organisms → Bacteria	34498	Open in IMG/M
3300005618\|Ga0068864_101423100	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	695	Open in IMG/M
3300005937\|Ga0081455_10228354	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1375	Open in IMG/M
3300005937\|Ga0081455_10611949	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	708	Open in IMG/M
3300005937\|Ga0081455_10805736	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	589	Open in IMG/M
3300006194\|Ga0075427_10115867	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	507	Open in IMG/M
3300006845\|Ga0075421_100261851	All Organisms → Viruses → Predicted Viral	2116	Open in IMG/M
3300009081\|Ga0105098_10048596	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1724	Open in IMG/M
3300009094\|Ga0111539_10597013	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1286	Open in IMG/M
3300009094\|Ga0111539_11594662	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	757	Open in IMG/M
3300009094\|Ga0111539_11959817	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	679	Open in IMG/M
3300009095\|Ga0079224_100823786	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1328	Open in IMG/M
3300009124\|Ga0118687_10219388	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	697	Open in IMG/M
3300009146\|Ga0105091_10352866	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	726	Open in IMG/M
3300009146\|Ga0105091_10474913	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	632	Open in IMG/M
3300009148\|Ga0105243_11166335	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	782	Open in IMG/M
3300009156\|Ga0111538_13726296	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	528	Open in IMG/M
3300009157\|Ga0105092_10000815	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	16568	Open in IMG/M
3300009157\|Ga0105092_10497903	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	698	Open in IMG/M
3300009168\|Ga0105104_10000222	All Organisms → cellular organisms → Bacteria	43289	Open in IMG/M
3300009168\|Ga0105104_10256266	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	956	Open in IMG/M
3300009609\|Ga0105347_1000345	Not Available	22754	Open in IMG/M
3300009609\|Ga0105347_1029351	All Organisms → Viruses → Predicted Viral	1913	Open in IMG/M
3300010154\|Ga0127503_10513436	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1629	Open in IMG/M
3300010154\|Ga0127503_10776515	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	647	Open in IMG/M
3300010354\|Ga0129333_10039654	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	4437	Open in IMG/M
3300011403\|Ga0137313_1003072	All Organisms → Viruses → Predicted Viral	3373	Open in IMG/M
3300011403\|Ga0137313_1038169	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	812	Open in IMG/M
3300011413\|Ga0137333_1004904	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	2962	Open in IMG/M
3300011415\|Ga0137325_1075970	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	741	Open in IMG/M
3300011417\|Ga0137326_1028721	All Organisms → Viruses → Predicted Viral	1191	Open in IMG/M
3300011432\|Ga0137428_1129394	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	733	Open in IMG/M
3300011445\|Ga0137427_10312728	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	661	Open in IMG/M
3300012142\|Ga0137343_1038560	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	676	Open in IMG/M
3300012212\|Ga0150985_103898325	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	762	Open in IMG/M
3300012212\|Ga0150985_112890047	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	743	Open in IMG/M
3300012469\|Ga0150984_103462605	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	632	Open in IMG/M
3300012469\|Ga0150984_105409980	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	2847	Open in IMG/M
3300012681\|Ga0136613_10652243	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	564	Open in IMG/M
3300012900\|Ga0157292_10056349	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1072	Open in IMG/M
3300012955\|Ga0164298_10652890	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	731	Open in IMG/M
3300012961\|Ga0164302_10302572	All Organisms → Viruses → Predicted Viral	1045	Open in IMG/M
3300012971\|Ga0126369_10000135	Not Available	44032	Open in IMG/M
3300012984\|Ga0164309_10160758	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1505	Open in IMG/M
3300012987\|Ga0164307_10081794	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1965	Open in IMG/M
3300014871\|Ga0180095_1000184	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	4867	Open in IMG/M
3300014880\|Ga0180082_1050500	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	886	Open in IMG/M
3300014880\|Ga0180082_1097705	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	663	Open in IMG/M
3300015077\|Ga0173483_10251007	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	842	Open in IMG/M
3300015200\|Ga0173480_10149983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1190	Open in IMG/M
3300015200\|Ga0173480_10449251	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	760	Open in IMG/M
3300015201\|Ga0173478_10767843	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	525	Open in IMG/M
3300015371\|Ga0132258_10679751	All Organisms → Viruses → Predicted Viral	2590	Open in IMG/M
3300015371\|Ga0132258_12588551	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1268	Open in IMG/M
3300018032\|Ga0187788_10052630	All Organisms → Viruses → Predicted Viral	1386	Open in IMG/M
3300018055\|Ga0184616_10000008	Not Available	45948	Open in IMG/M
3300018072\|Ga0184635_10000724	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	8824	Open in IMG/M
3300018074\|Ga0184640_10356443	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	663	Open in IMG/M
3300018083\|Ga0184628_10057056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1976	Open in IMG/M
3300018083\|Ga0184628_10132929	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1290	Open in IMG/M
3300018481\|Ga0190271_10025772	All Organisms → cellular organisms → Bacteria	4643	Open in IMG/M
3300019889\|Ga0193743_1027042	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	2819	Open in IMG/M
3300021082\|Ga0210380_10084922	All Organisms → Viruses → Predicted Viral	1391	Open in IMG/M
3300021437\|Ga0213917_1028709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	624	Open in IMG/M
3300022908\|Ga0247779_1045262	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300022917\|Ga0247777_1172181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	706	Open in IMG/M
3300023169\|Ga0247762_1094802	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	828	Open in IMG/M
3300024287\|Ga0247690_1003485	All Organisms → Viruses → Predicted Viral	1942	Open in IMG/M
3300025927\|Ga0207687_10240434	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1434	Open in IMG/M
3300025935\|Ga0207709_11604673	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	540	Open in IMG/M
3300026643\|Ga0207923_100076	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	939	Open in IMG/M
3300027362\|Ga0208320_1024373	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	699	Open in IMG/M
3300027513\|Ga0208685_1005602	All Organisms → Viruses → Predicted Viral	3365	Open in IMG/M
3300027513\|Ga0208685_1121496	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	560	Open in IMG/M
3300027573\|Ga0208454_1090840	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	712	Open in IMG/M
3300027675\|Ga0209077_1000016	Not Available	43659	Open in IMG/M
3300027675\|Ga0209077_1027257	Not Available	1543	Open in IMG/M
3300027743\|Ga0209593_10000102	Not Available	43290	Open in IMG/M
3300027743\|Ga0209593_10000107	Not Available	42993	Open in IMG/M
3300027821\|Ga0209811_10000094	Not Available	39563	Open in IMG/M
3300027874\|Ga0209465_10000075	Not Available	43923	Open in IMG/M
3300027874\|Ga0209465_10001028	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12627	Open in IMG/M
3300027907\|Ga0207428_10904506	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	623	Open in IMG/M
3300027909\|Ga0209382_10293777	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1834	Open in IMG/M
3300027991\|Ga0247683_1005153	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1143	Open in IMG/M
3300028009\|Ga0265348_100016	Not Available	3574	Open in IMG/M
3300028035\|Ga0265347_102551	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	592	Open in IMG/M
3300028646\|Ga0302159_10111747	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	618	Open in IMG/M
3300028676\|Ga0302167_10078455	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	962	Open in IMG/M
3300028772\|Ga0302209_10191237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	577	Open in IMG/M
3300028868\|Ga0302163_10213188	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	538	Open in IMG/M
3300030019\|Ga0311348_10124356	All Organisms → Viruses → Predicted Viral	1912	Open in IMG/M
3300031057\|Ga0170834_104799663	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1020	Open in IMG/M
3300034113\|Ga0364937_023863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus cremeus	1030	Open in IMG/M
3300034115\|Ga0364945_0045653	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1213	Open in IMG/M
3300034147\|Ga0364925_0000190	Not Available	19242	Open in IMG/M
3300034149\|Ga0364929_0000825	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	6696	Open in IMG/M
3300034149\|Ga0364929_0107072	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	884	Open in IMG/M
3300034690\|Ga0364923_0138289	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	630	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.06%
Host-Associated	Host-Associated	22.94%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	39.45%
Terrestrial	Environmental → Terrestrial	37.61%
Plants	Host-Associated → Plants	22.94%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Sediment	23.85%
Soil	Environmental → Terrestrial → Soil	22.94%
Freshwater	Environmental → Aquatic → Freshwater	14.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.09%
Floodplain	Environmental → Terrestrial → Floodplain	5.50%
Peat	Environmental → Terrestrial → Peat	4.59%
Plant Litter	Environmental → Terrestrial → Plant Litter	4.59%
Marine	Environmental → Aquatic → Marine	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	23.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.35%
Sediment	Environmental → Aquatic → Freshwater → Sediment	11.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.09%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	5.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.59%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	4.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.59%
Loam	Environmental → Terrestrial → Soil → Loam	3.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.83%
Ice	Environmental → Aquatic → Freshwater → Ice	0.92%
Creek	Environmental → Aquatic → Freshwater → Creek	0.92%
Coastal	Environmental → Aquatic → Marine → Coastal	0.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	23.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	11.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.09%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	5.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.59%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	4.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	18.35%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	10.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.34%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	5.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.59%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.59%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	4.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.75%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.75%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.92%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.92%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.92%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011413	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012134	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT142_2	Environmental	Open in IMG/M
3300012142	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT499_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014871	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1Da	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015255	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021437	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 1-17 MG	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026643	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN338 (SPAdes)	Environmental	Open in IMG/M
3300027362	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027991	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK24	Environmental	Open in IMG/M
3300028009	Plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE6	Environmental	Open in IMG/M
3300028035	Plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE5	Environmental	Open in IMG/M
3300028646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_2	Environmental	Open in IMG/M
3300028676	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_1	Environmental	Open in IMG/M
3300028772	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_1	Environmental	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1045231621	3300000364	Soil	MQFTTFVRKPFVVEAVEVTKDNISEVAKYVGDLRQKEDGTPYILVDPRLVPNVPDIFRVYPGFFMTKMGENVRCYSRKIFTEQFMAPGD
Ga0063356_1009221981	3300004463	Arabidopsis Thaliana Rhizosphere	MEFKPFVRKPFVVEAVEVTKENIAEIAKYVGELREKDDGTPFIYVDRRLVPNIFRVYPGFFMTRMGDHIRCYSQKVFFEQFTESDDKIQEWVDFLNAGGLPNSRTKTG*
Ga0066395_1000005848	3300004633	Tropical Forest Soil	MDFTNFVRKPFVVEAVEVTIDNIGEVAKYVGDLREEEDGTKYILVDHRLVPNVMRVYPGFYMTKMGKKVRCYSRKIFREQFVEEDENIRPWVEFMEANSV*
Ga0062591_1014373232	3300004643	Soil	MEFTQYVRKPFIVEAVEVTVENMAEVAKYVGEMRHKDDGMPFIYVDRRLVPNVFRVYPGFYMTRMGNHIRCYSRKVFLEQFVPSHPDIVTWVDFLNNGGVENSRTKTTEGATT*
Ga0065717_10035982	3300005276	Arabidopsis Rhizosphere	MQFTTFVRKPFVVEAVEVTKDNISEVAKYVGDLRQKEDGTPYILVDPRLVPNVPDIFRVYPGFFMTKMGENVRCYSRKIFTEQFMAPGDVKPWVDEMVNDFAAGGVGINIYDDKDVNVRK
Ga0068868_1000036256	3300005338	Miscanthus Rhizosphere	MKIRQLLTRSKKKSPPFIRKIGNMEFTTYVRKPFVVEAVEITKENIAEVAKFVGDLREKEDGTPYILVDRRLVPNVFRVYPEFFMTKMGENVRCYSRKIFHDQFTEQTEDIEPWVKFINSDKSEAPSS*
Ga0070673_1002793382	3300005364	Switchgrass Rhizosphere	MEFTTYVRKPFVVEAVEITKENIAEVAKFVGDLREKEDGTPYILVDRRLVPNVFRVYPEFFMTKMGENVRCYSRKIFHDQFTEQTEDIEPWVKFINSDKSEAPSS*
Ga0073909_1000008844	3300005526	Surface Soil	MEFATFVRKPFVVEAVEVTAANIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFRVYPGFFMTKMGENVRCYSRKIFKEQFTETTDKINAWVEFMSSPEPKEAQ*
Ga0068864_1014231001	3300005618	Switchgrass Rhizosphere	NMEFTTYVRKPFVVEAVEITKENIAEVAKFVGDLREKEDGTPYILVDRRLVPNVFRVYPEFFMTKMGENVRCYSRKIFHDQFTEQTEDIEPWVKFINSDKSEAPSS*
Ga0081455_102283542	3300005937	Tabebuia Heterophylla Rhizosphere	MEFTTFVRKPFVVEAVEVTAENIAEVAKYVGDLREKEDGTQYILVDRRLVPNVFRVYPGFYMTKMGENVRCYSRKIFREQFVEEDDNIRPWLEFMEKQAV*
Ga0081455_106119491	3300005937	Tabebuia Heterophylla Rhizosphere	MNFSTFVRKPFAVEAIEVTTENIAEVAKYVGDLREKEDGTPYVLVDQRLVPNVDRVYPGFYMTRMGENVRCYSKKIFREQFIEQDDKVKQWVDFVNGKEKNG*
Ga0081455_108057362	3300005937	Tabebuia Heterophylla Rhizosphere	MQFTTFVRKPFVVEAVEVTKDNISEVAKYVGDLRQKEDGTPYILVDPRLVPNVPDIFRVYPGFFMTKMGENVRCYSRKIFTEQFMEPQEVKPWVDEMINDFSVDADVGINIYDDSDVNARR*
Ga0075427_101158671	3300006194	Populus Rhizosphere	MDFDTFVRKPFVVQAVEITKENIEEVAQFVGTLRKKEDGTPYILVDQRLVPNVFRVYPGFFMTKMGENFRCYSRRIFLDQFIPKDDSTQQWLDYLNGDSDEIEVEPI
Ga0075421_1002618513	3300006845	Populus Rhizosphere	MDFDTFVRKPFVVQAVEITKENIEEVAQFVGTLRKKEDGTPYILVDQRLVPNVFRVYPGFFMTKMGENFRCYSRRIFLDQFIPKDDSTQQWLDYLNGDSDEIEVEPISAPT*
Ga0105098_100485963	3300009081	Freshwater Sediment	METDIPISSNPTNEKRNPMEFATFVRKPFVVEAIEITAENIGEVAKYVGDLREKEDGTPYILVDRRLVPNVFKVYPGFYMTKMGENIRCYSRKIFREQFMEQTDEIKPWVDYMTGNTEPVAS*
Ga0111539_105970131	3300009094	Populus Rhizosphere	HPPDVPEPDPTPEIGKPKAMNFTTFVRKPFVVDAVEITPENIEEVAKYVGDLREKEDGTKYILVDRRLVPNVFRVYTGFYMTKMGENIRCYSRKIFKEQFTEHNDSVQPWLDFMESQDAATPVG*
Ga0111539_115946622	3300009094	Populus Rhizosphere	MEFATFVRKPFVVDAVEITTENIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFKVYPGFYMTKMGENIRCYSRKIFREQFMEQTEEIKPWIDYMTGNTETVSS*
Ga0111539_119598171	3300009094	Populus Rhizosphere	LPLPNKENQMDFDTFVRKPFVVQAVEITKENIEEVAQFVGTLRKKEDGTPYILVDQRLVPNVFRVYPGFFMTKMGENFRCYSRRIFLDQFIPKDDSTQQWLDYLNGDSDEIQVEPISAPT
Ga0079224_1008237861	3300009095	Agricultural Soil	MNFNQYVRKPFVVEAVEVTEENLEEVAKFVGEVREKQGSGRYIQVDRRIVPNVYRVYPGFFMTRMGDHIRCYNPKIFHEQFVEGNPEIIAWVDFMHGKKVEEIAE*
Ga0118687_102193882	3300009124	Sediment	MEEANKTSLGFSNHVRKPFIVEAVEITAANIHEVAKFVGDVEEKEDGTPFIKVDRRLVPNVYRVYVGFYMTRMGDHIRCYSRKVFNEQFTVLTPDIKTWVDFMNETKDV*
Ga0105091_103528661	3300009146	Freshwater Sediment	MHFTTFVRKPFSVKAVEVTTENIAEIAKYVGDLKEKEDGTPYILVDQRMVPNVERVYPGFYMTKMGENVRCYSRRIFREQF
Ga0105091_104749131	3300009146	Freshwater Sediment	KPFVVEAVEITNENIEQVAKHVGDLRDGDDGSKYILVDLRLVPNVDRVYPGFFMTKMGKNVRCYSRRVFREQFIENDDTVKPWVDFMEQKAGA*
Ga0105243_111663351	3300009148	Miscanthus Rhizosphere	IRQLLTRSKKKSPPFIRKIGNMEFTTYVRKPFVVEAVEITKENIAEVAKFVGDLREKEDGTPYILVDRRLVPNVFRVYPEFFMTKMGENVRCYSRKIFHDQFTEQTEDIEPWVKFINSDKSEAPSS*
Ga0111538_137262961	3300009156	Populus Rhizosphere	NKENQMDFDTFVRKPFVVQAVEITKENIEEVAQFVGTLRKKEDGTPYILVDQRLVPNVFRVYPGFFMTKMGENFRCYSRRIFLDQFIPKDDSTQQWLDYLNGDSDEIQVEPISAPT*
Ga0105092_1000081512	3300009157	Freshwater Sediment	MEFTTFVRKPFTVKGVEITAQNIEEVSKYIGELRDVGDGTKYILVDPRVVPNLEKVYTGFYMTKMGQNVRCYSRRVFREQFIEEDDSIRPWLEFMDKKGQ*
Ga0105092_104979031	3300009157	Freshwater Sediment	METDIPISSNQTNEKRNPMEFATFVRKPFVVEAIEITAENIGEVAKYVGDLREKEDGTPYILVDRRLVPNVFKVYPGFYMTKMGENIRCYSRKIFREQFMEQTDEIKPWVDYMTSGETSAA*
Ga0105104_1000022216	3300009168	Freshwater Sediment	MRTPRQKLEVRTRRKNEQGSSMEFTTFVRKPFTVKGVEITAQNIEEVSKYIGELRDVGDGTKYILVDPRVVPNLEKVYTGFYMTKMGQNVRCYSRRVFREQFIEEDDSIRPWLEFMDKKGQ*
Ga0105104_102562662	3300009168	Freshwater Sediment	MEFATFVRKPFVVEAIEITAENIGEVAKYVGDLREKEDGTPYILVDRRLVPNVFKVYPGFYMTKMGENIRCYSRKIFREQFMEQTDEIKPWIDYMTGNAEPVAS*
Ga0105347_100034512	3300009609	Soil	MQFTTFVRKPFVVDAVEVTTENIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFRVYPGFFMTKMGENVRCYSRKIFKEQFMVQTDEIKPWVDFMAKSGDSQ*
Ga0105347_10293515	3300009609	Soil	MLRNRDSTKHERNPQLMDFTVFVRKPFMVMAVEVTVENINEVSKYVGDLREKEDGTPYILVDPRLVPNVERVYPGFYMTKMGENVRCYSRKIFRDQFTEQTEKNKEWVAFMNA*
Ga0127503_105134363	3300010154	Soil	MEFTTFVRKPFVVQAVEVTAENINEVAKYIGDVREREDGTQYILVDRRLVPNVFKVYPGFFMTKMGENVRCYSRKIFREQFVEEDESIKPWVEFMEKRGV*
Ga0127503_107765151	3300010154	Soil	MKFTTFVRKPFVVEAVEITVENISEVAKYVGDLREMEDGAPYILVDNRLVPNVNRVFPGFYMTKIGGKVRCYSKKIFREQFIEQTDEIKPWVDFMTGNDSGG*
Ga0129333_100396544	3300010354	Freshwater To Marine Saline Gradient	MDFTTFVRKPFVVEAVEITTDNIEEVAKYIGDVREKDDGTKYILVDRRLVPNVEKVYPGFFMTKMGENVRCYSRKIFREQFMERTEEVQPWLDFMESQSV*
Ga0137313_10030722	3300011403	Soil	MEFSEYVRKPFVVEAIEVTTENIAEVAKYVGEVREKEDGTPFILVDRRLIPNVFRVYPGYWMTRMGDHIRCYSRKIFLEQFVESHPDIIAWVDFMNNGGVENSRTNVGLAAVTIDVIPNGT*
Ga0137313_10381691	3300011403	Soil	IEMEFTTFVRKPFEVLAVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFVESNEEIKQWVDWMNGVGDEPEAAEEEVA*
Ga0137333_10049041	3300011413	Soil	EVLAVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFVESNEEIKQWVDWMNGVGDEPEAAEEDVA*
Ga0137325_10759701	3300011415	Soil	TFVRKPFVVDAVEITTENIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFKVYPGFYMTKMGENIRCYSRKIFREQFMEQTDEIKPWIDYMTGNAEPSVA*
Ga0137326_10287212	3300011417	Soil	MEFATFVRKPFVVDAVEITTENIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFKVYPGFYMTKMGENIRCYSRKIFREQFMEQTDEIKPWIDYMTGNAEPSVA*
Ga0137428_11293942	3300011432	Soil	FVVEAIEVTTENIAEVAKYVGEVREKEDGTPFILVDRRLIPNVFRVYPGYWMTRMGDHIRCYSRKIFLEQFVESHPDIIAWVDFMNNGGVENSRTNVGLAAVTIDVIPNGT*
Ga0137427_103127282	3300011445	Soil	DAVEITTENIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFKVYPGFYMTKMGENIRCYSRKIFREQFMEQTEEIKPWIDYMTGNTEAVSS*
Ga0137330_10012445	3300012134	Soil	MEFTTFVRKPFEVLAVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFV
Ga0137343_10385601	3300012142	Soil	LKHNQKETRNQQMEFSEYVRKPFVVEAIEVTTENIAEVAKYVGEVREKEDGTPFILVDRRLIPNVFRVYPGYWMTRMGDHIRCYSRKIFLEQFVESHPDIIAWVDFMNNGGVENSRTNVGLAAVTIDVIPNGT*
Ga0150985_1038983251	3300012212	Avena Fatua Rhizosphere	VEVTTDNISEVAKYVGDLREEDDGTQYILVDRRLVPNIARVYTGFYMTKMGKNVRCYSRKIFRDQFIEEDENVKPWVEYMASDKAEV*
Ga0150985_1128900472	3300012212	Avena Fatua Rhizosphere	FVVQAVEVTVDNINEVAKYVGDVREKEDGTLYILVDRRLVPNVFRVYPGFFMTKMGENVRCYSRKIFREQFVEEDDNMRQWVEFMEKQP*
Ga0150984_1034626052	3300012469	Avena Fatua Rhizosphere	MEFTPYVRKPFVVQAVEITSDNINEVAKYIGDVREREDGTQYILVDRRLVPNVFKVYPGFFMTKMGENIRCYSRKIFREQFIEEDESITPWVEFMERRG*
Ga0150984_1054099803	3300012469	Avena Fatua Rhizosphere	MQIKLLPRSKADRGNHMDFKSFVRKPFVVQAVEVTVDNINEVAKYVGDVREKEDGTLYILVDRRLVPNVFRVYPGFFMTKMGENVRCYSRKIFREQFVEEDDNMRQWVEFMEKQP*
Ga0136613_106522431	3300012681	Polar Desert Sand	MDFTTFVRKPFAVEAVEVTEENIAEIAKLVGTLREKDDGSSYIHVDRRLVPNVFRVFPGFWMTKMGDNVRCYSNLVFRNQFIESSLDIENLVTLLNDHALE
Ga0157292_100563492	3300012900	Soil	MEFTQYVRKPFLVEAVEVTAENMAEVAKYVGEMREKDDGTPFIYVDRRLVPNVFRVYPGFYMTRMGDHIRCYSRKVFLEQFVPSHPDVVAWVEFINNGDGKTQTPKGVTT*
Ga0164298_106528901	3300012955	Soil	MQFTTFVRKPFVVEAVEVTADNIAEVAKYVGDLREEDDGTQYILVDRRLVPNIARVYTGFYMTKMGKNVRCYSRKIFRDQFIEEDENVKPWVDYMADKSEASQV*
Ga0164302_103025723	3300012961	Soil	MQFTTFVRKPFVVEAVEVTADNIAEVAKYVGDLREEDDGTQYILVDRRLVPNIARVYTGFYMTKMGKNVRCYSRKIFRDQFIEEDENVKPWVDYMSDKAEAPQA*
Ga0126369_1000013515	3300012971	Tropical Forest Soil	MGAKIFGKHKKPDGRGQSMDFTNFVRKPFVVEAVEVTIDNIGEVAKYVGDLREEEDGTKYILVDHRLVPNVMRVYPGFYMTKMGKKVRCYSRKIFREQFVEEDENIRPWVEFMEANSV*
Ga0164309_101607581	3300012984	Soil	QRIRMQFTTFVRKPFVVEAVEVTADNIAEVAKYVGDLREEDDGTQYILVDRRLVPNIARVYTGFYMTKMGKNVRCYSRKIFRDQFIEEDENVKPWVDYMADKSEASQV*
Ga0164307_100817941	3300012987	Soil	PFVVEAVEVTADNIAEVAKYVGDLREEDDGTQYILVDRRLVPNIARVYTGFYMTKMGKNVRCYSRKIFRDQFIEEDENVKPWVDYMSDKAEAPQA*
Ga0180095_10001845	3300014871	Soil	MEFTTFVRKPFEVLAVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFVESNEEIKQWVDWMNGVGDEPEAAEEDVA*
Ga0180082_10505002	3300014880	Soil	MEFTTFVRKPFEVLAVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFVESNEEIKQWVDWMNGVGDEPEAAEEEVA*
Ga0180082_10977051	3300014880	Soil	MEFSEYVRKPFVVEAIEVTTENIAEVAKYVGEVREKEDGTPFILVDRRLIPNVFRVYPGYWMTRMGDHIRCYSRKIFLEQFVESHPDIIAWVDFMN
Ga0173483_102510072	3300015077	Soil	MEFTQYVRKPFLVEAVEVTAENMAEVAKYVGEMREKDDGTPFIYVDRRLVPNVFRVYPGFYMTRMGDHIRCYSRKVFLEQFVQSHPDIVAWVEFINNGDGKTQTPKGVTT*
Ga0173480_101499833	3300015200	Soil	MEFTQYVRKPFLVEAIEVTAENMAEVAKYVGEMREKDDGTPFIYVDRRLVPNVFRVYPGFYMTRMGDHIRCYSRKVFLEQFVPSHPDIVTWVDFLNNGGVENSRTKTTEGATT*
Ga0173480_104492511	3300015200	Soil	MESGMEFSTFVRKPFIVEAVEITEENIGELAELVGALREKEDGTPYIQVDRRLVPNIYRVYPGFWMTKMGDNIRCYSQKVFREQFTRNEPDIDTWVKFMNGSPNKNIFGYESA*
Ga0173478_107678431	3300015201	Soil	MEFSQYVRKPFLVEAVEVTAENMAEVAKYVGEMREKDDGTPFIYVDRRLVPNVFRVYPGFYMTRMGDHIRCYSRKVFLEQFVPSHPDVVAWVEFINNGDGKTQTPKGVTT*
Ga0180077_10122401	3300015255	Soil	AVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFVESNEEIKQWVDWMNGVGDEPEAAEEDVA*
Ga0180077_10256361	3300015255	Soil	AVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFVESNEEIKQWVDWMNGVGDEPEAAEEEVA*
Ga0132258_106797513	3300015371	Arabidopsis Rhizosphere	MALKFPSHKKNNHQGSPMEFTRFVRKPFVVEAIEITAENIEEVAKYVGDVRVEEDDGTKYILVDRRLVPNVFRVYPGFFMTKMGRNVRCYSRKIFREQFVEEDEDIRPWLDFMEVERNKTG*
Ga0132258_125885515	3300015371	Arabidopsis Rhizosphere	MNFTTFVRKPFVVDAVEVTLENIGEVAKYVGDLREKENGTPYILVDRRLVPNVDRVYPGFFMTKMGENVRCYSRKIFKEQFMQQTDEIK
Ga0187788_100526302	3300018032	Tropical Peatland	MDFATFVRKPFVVEAVEVTTENIAEVAKYVGDLREKEDGTPYILVDRRLVPNVYRVYPGFFMTKMGENVRCYSKKIFKEQFMSQTDEIKPWVDFMMNTTESAA
Ga0184616_1000000824	3300018055	Groundwater Sediment	MRSQTQLKRIEMEFTTFVRKPFEVLAVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFVESNEEIKQWVDWMNGVGDEPEAAEEDV
Ga0184635_100007246	3300018072	Groundwater Sediment	MEFATFVRKPFVVEAIEITAENIGEVAKYVGDLREKEDGTPYILVDRRLVPNVFKVYPGFYMTKMGENIRCYSRKIFREQFMEQTDEIKPWIDYMTGNAEPVAS
Ga0184640_103564432	3300018074	Groundwater Sediment	MEFATFVRKPFVVEAIEITAENIGEVAKYVGDLREKEDGTPYILVDRRLVPNVFKVYPGFYMTKMGENIRCYSRKIFREQFMEQTDEIKPWVDYMTSGETSAA
Ga0184628_100570566	3300018083	Groundwater Sediment	AVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFVESNEEIKQWVDWMNGVGDEPEAAEEDVA
Ga0184628_101329295	3300018083	Groundwater Sediment	AVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFVESNEEIKQWVDWMNGVGDEPEAAEEEVA
Ga0190271_100257723	3300018481	Soil	MEFTTFVRKPFVVEAVEVTSKNIAEVAKYVGDLREKEDGSPYILVDRRLVPNVFKVYPGFFMTKMGENVRCYSRKIFKEQFVEEDESIRPWIEFMEKHA
Ga0193743_10270427	3300019889	Soil	METTTFVRKPFVVEAIEITTENIEEVAKHVGDLKEKEDGTPYILVDRRLVPNVFRVYPGFFMTKMGENIRCYSRKVFTDQFMEKDETIQPWLDFLEGGG
Ga0210380_100849223	3300021082	Groundwater Sediment	MEFDTFVRKPFKVQAVEITRENIAEVAKYVGDLKEKDDGTPFILVDKRLVPNVFRVFPGFWMTRMGENVRCYSKKIFVEQFVQSTVEIDQWVDWMNGVGEEPEVEEVDA
Ga0213917_10287091	3300021437	Freshwater	MEFTTYVRVPFRVEAVEITVDNIEEVAKYIGDVREKDDGTKYILVDRRLVPNVYRVFPGFFMTKMGENVRCYSRKIFLEQFAKVHTDPVDALV
Ga0247779_10452622	3300022908	Plant Litter	MEFTQYVRKPFIVEAVEVTVENMAEVAKYVGEMRHKDDGMPFIYVDRRLVPNVFRVYPGFYMTRMGNHIRCYSRKVFLEQFVPSHPDIVTWVDFLNNGGVENSRTKTTEGATT
Ga0247777_11721811	3300022917	Plant Litter	MDFTTFVRKPFVVEAVEVTAENINEVAKYIGDVREREDGTQYILVDRRLVPNVFKVYPGFFMTKMGENIRCYSRKIFKEQFIEKTAEVQPWIDFMDQQAS
Ga0247762_10948022	3300023169	Plant Litter	MEFSQYVRKPFLVEAVEVTAENMAEVAKYVGEMREKDDGTPFIYVDRRLVPNVFRVYPGFYMTRMGDHIRCYSRKVFLEQFVPSHPDVVAWVEFINNGDGKTQTPKGVTT
Ga0247690_10034853	3300024287	Soil	MLVFKDFVRKPFVVEAVEITAENIEEIAKIIGEIEEKEDGTKSIKVDRRLMPNLFRVEIGFYMTRMGDHVRCYNRKVFFRQFATLTPEIKTWVDFMTKAKS
Ga0207687_102404342	3300025927	Miscanthus Rhizosphere	MKIRQLLTRSKKKSPPFIRKIGNMEFTTYVRKPFVVEAVEITKENIAEVAKFVGDLREKEDGTPYILVDRRLVPNVFRVYPEFFMTKMGENVRCYSRKIFHDQFTEQTEDIEPWVKFINSDKSEAPSS
Ga0207709_116046731	3300025935	Miscanthus Rhizosphere	IRKIGNMEFTTYVRKPFVVEAVEITKENIAEVAKFVGDLREKEDGTPYILVDRRLVPNVFRVYPEFFMTKMGENVRCYSRKIFHDQFTEQTEDIEPWVKFINSDKSEAPSS
Ga0207923_1000763	3300026643	Soil	MQFSTFVRKPFIVDAIEVTAANIGEVAKYVGDLREKEDGTPYILVDRRLVPNVDRVYPGFFMTKMGENVRCYSRKIFRDQFIIQTPEIKPWIDFMVQNELPNGQPIA
Ga0208320_10243731	3300027362	Soil	MEFTTFVRKPFEVLAVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFVESNEEIKQWVDWMNGVGDEPEAAEEEVA
Ga0208685_10056022	3300027513	Soil	MQFTTFVRKPFVVDAVEVTTENIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFRVYPGFFMTKMGENVRCYSRKIFKEQFMVQTDEIKPWVDFMAKSGDSQ
Ga0208685_11214961	3300027513	Soil	MDFTVFVRKPFMVMAVEVTVENINEVSKYVGDLREKEDGTPYILVDPRLVPNVERVYPGFYMTKMGENVRCYSRKIFRDQFTEQTEKNKEWVAFMNA
Ga0208454_10908401	3300027573	Soil	FTVFVRKPFMVMAVEVTVENINEVSKYVGDLREKEDGTPYILVDPRLVPNVERVYPGFYMTKMGENVRCYSRKIFRDQFTEQTEKNKEWVAFMNA
Ga0209077_100001641	3300027675	Freshwater Sediment	MDFTTYVRKPFVVEAVEITVANIGSIAKFVGDLREKEDGSPYILVDPRLVPNIERVYPGFFMTKMGENIRCYSRRIFKDQFMVQDDQIKPWVDYMMGDRSAA
Ga0209077_10272572	3300027675	Freshwater Sediment	MSTEKSEDWKVDSMHFTTFVRKPFSVKAVEVTTENIAEIAKYVGDLKEKEDGTPYILVDQRMVPNVERVYPGFYMTKMGENVRCYSRRIFREQFTEQNDTIKPWVEFMAGIGPEPILND
Ga0209593_1000010217	3300027743	Freshwater Sediment	MEFTTFVRKPFTVKGVEITAQNIEEVSKYIGELRDVGDGTKYILVDPRVVPNLEKVYTGFYMTKMGQNVRCYSRRVFREQFIEEDDSIRPWLEFMDKKGQ
Ga0209593_1000010714	3300027743	Freshwater Sediment	METDIPISSNPTNEKRNPMEFATFVRKPFVVEAIEITAENIGEVAKYVGDLREKEDGTPYILVDRRLVPNVFKVYPGFYMTKMGENIRCYSRKIFREQFMEQTDEIKPWVDYMTGNTEPVAS
Ga0209811_1000009412	3300027821	Surface Soil	MEFATFVRKPFVVEAVEVTAANIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFRVYPGFFMTKMGENVRCYSRKIFKEQFTETTDKINAWVEFMSSPEPKEAQ
Ga0209465_1000007512	3300027874	Tropical Forest Soil	MDFTNFVRKPFVVEAVEVTIDNIGEVAKYVGDLREEEDGTKYILVDHRLVPNVMRVYPGFYMTKMGKKVRCYSRKIFREQFVEEDENIRPWVEFMEANSV
Ga0209465_1000102816	3300027874	Tropical Forest Soil	MHFTTFVRKPFVVEAVEVTVDNIEEVAKYVGDLREKEDGTKYILVDRRLVPNVFRVYPGFFMTKMGENVRCYSRKIFKEQFVEEDENVKPWVEFMSAQA
Ga0207428_109045061	3300027907	Populus Rhizosphere	MDFDTFVRKPFVVQAVEITKENIEEVAQFVGTLRKKEDGTPYILVDQRLVPNVFRVYPGFFMTKMGENFRCYSRRIFLDQFIPKDDSTQQWLDYLNGDSDEIQVEPISAPT
Ga0209382_102937775	3300027909	Populus Rhizosphere	MDFDTFVRKPFVVQAVEITKENIEEVAQFVGTLRKKEDGTPYILVDQRLVPNVFRVYPGFFMTKMGENFRCYSRRIFLDQFIPKDDSTQQWLDYLNGDSDEIEVEPISAPT
Ga0247683_10051533	3300027991	Soil	KMEFATFVRKPFPVQAVEVTAENIAEVAKYVGDLREKDDGTPYILVDRRLVPNVFRVYPGFFMTRMGENVRCYSRKIFKEQFIQETEQIKEMADVINGNSQ
Ga0265348_1000166	3300028009	Plant Litter	MNFTTFVRKPFVVDAIEVTSENIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFRVYPGFFMTKMGENVRCYSRKIFKEQFIVQTAEIKPWVEIMGKNDTAA
Ga0265347_1025511	3300028035	Plant Litter	MNFTTFVRKPFVVDAIEVTSENIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFRVYPGFFMTKMGENVRCYSRKIFKEQFIVQTAEIKPWVEIMGKNDT
Ga0302159_101117472	3300028646	Fen	RKPFIVQAVEVTTENIEEVAKYIGDVREREDGTQYILVDRRLVPNVFKVYPGFFMTKMGENVRCYSRKIFKDQFIESTDDIKKWVEFLDDEERKTA
Ga0302167_100784553	3300028676	Fen	MIARLRTVKPFTRKRHSQNGINMEFKTFVRKPFIVQAVEVTTENIEEVAKYIGDVREREDGTQYILVDRRLVPNVFKVYPGFFMTKMGENVRCYSRKIFKDQFIESTDDIKKWVEFLDDEERKTA
Ga0302209_101912372	3300028772	Fen	MIARLRTVKPFTRKRHSQNGINMEFKTFVRKPFIVQAVEVTTENIEEVAKYIGDVREREDGTQYILVDRRLVPNVFKVYPGFFMTKMGENVRCYSRKIFKDQFIESTDDIKKWVE
Ga0302163_102131882	3300028868	Fen	PFTRKRHSQNGINMEFKTFVRKPFIVQAVEVTTENIEEVAKYIGDVREREDGTQYILVDRRLVPNVFKVYPGFFMTKMGENVRCYSRKIFKDQFIESTDDIKKWVEFLDDEERKTA
Ga0311348_101243562	3300030019	Fen	MEFKTFVRKPFIVQAVEVTTENIEEVAKYIGDVREREDGTQYILVDRRLVPNVFKVYPGFFMTKMGENVRCYSRKIFKDQFIESTDDIKKWVEFLDDEERKTA
Ga0170834_1047996632	3300031057	Forest Soil	MNFTTFVRKPFVVDAVEVTAENIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFRVYPGFFMTKMGENVRCYSRKIFKEQFIIQTPEIKPWVEIMGKNDQGTAA
Ga0364937_023863_700_1029	3300034113	Sediment	VEAIEVTTENIAEVAKYVGEVREKEDGTPFILVDRRLIPNVFRVYPGYWMTRMGDHIRCYSRKIFLEQFVESHPDIIAWVDFMNNGGVENSRTNVGLAAVTIDVIPNGT
Ga0364945_0045653_288_602	3300034115	Sediment	MEFATFVRKPFVVDAVEITTENIAEVAKYVGDLREKEDGTPYILVDRRLVPNVFKVYPGFYMTKMGENIRCYSRKIFREQFMEQTEEIKPWIDYMTGNTEAVSS
Ga0364925_0000190_13185_13550	3300034147	Sediment	MEFSEYVRKPFVVEAIEVTTENIAEVAKYVGEVREKEDGTPFILVDRRLIPNVFRVYPGYWMTRMGDHIRCYSRKIFLEQFVESHPDIIAWVDFMNNGGVENSRTNVGLAAVTIDVIPNG
Ga0364929_0000825_4966_5298	3300034149	Sediment	MEFTTFVRKPFEVLAVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFVESNEEIKQWVDWMNGVGDEPEAAEEDVA
Ga0364929_0107072_589_882	3300034149	Sediment	LAVEITKDNIAEVAKLVGDLKEKEDGTPFILVDKRLVPNVFRVFPGFWMTKMGDNIRCYSKKIFTDQFVESNEEIKQWVDWMNGVGDEPEAAEEEVA
Ga0364923_0138289_2_310	3300034690	Sediment	MEFSEYVRKPFVVEAIEVTTENIAEVAKYVGEVREKEDGTPFILVDRRLIPNVFRVYPGYWMTRMGDHIRCYSRKIFLEQFVESHPDIIAWVDFMNNGGVENS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089142

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences