Metagenome / Metatranscriptome Family F085355

Basic Information
Family ID	F085355
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	52 residues
Representative Sequence	MDSLRTALTWVKDLLDWLPDPVVALLILAIAVLVALALHRWARKLVRRT
Number of Associated Samples	104
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.18 %
% of genes near scaffold ends (potentially truncated)	97.30 %
% of genes from short scaffolds (< 2000 bps)	94.59 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Bacteria (59.459 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (9.910 % of family members)
Environment Ontology (ENVO)	Unclassified (25.225 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.640 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF05071	NDUFA12	83.78
PF09923	DUF2155	4.50
PF03588	Leu_Phe_trans	1.80
PF00155	Aminotran_1_2	0.90
PF02785	Biotin_carb_C	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3761	NADH:ubiquinone oxidoreductase NDUFA12 subunit (Leigh syndrome)	Energy production and conversion [C]	83.78
COG2360	Leu/Phe-tRNA-protein transferase	Posttranslational modification, protein turnover, chaperones [O]	1.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.46 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.46 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.46 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	58.56 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58.56 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	47.75 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.11 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	4.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.50 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	4.50 %
Undibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Undibacter	3.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	4.50 %
Undibacter mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Undibacter → Undibacter mobilis	3.60 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	4.50 %
Undibacter mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Undibacter → Undibacter mobilis	3.60 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y02IDIX1	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	609	Open in IMG/M
3300000953\|JGI11615J12901_10488690	Not Available	523	Open in IMG/M
3300001139\|JGI10220J13317_10368512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300001228\|SwM_144712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	524	Open in IMG/M
3300004009\|Ga0055437_10314919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	522	Open in IMG/M
3300004643\|Ga0062591_102618197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300005146\|Ga0066817_1023675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	579	Open in IMG/M
3300005159\|Ga0066808_1037085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300005163\|Ga0066823_10001744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2556	Open in IMG/M
3300005168\|Ga0066809_10113252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300005218\|Ga0068996_10132269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	596	Open in IMG/M
3300005344\|Ga0070661_101271356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	617	Open in IMG/M
3300005438\|Ga0070701_10848824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300005467\|Ga0070706_101200953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	697	Open in IMG/M
3300005518\|Ga0070699_100731484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	905	Open in IMG/M
3300005617\|Ga0068859_100599669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1194	Open in IMG/M
3300006041\|Ga0075023_100134223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	895	Open in IMG/M
3300006047\|Ga0075024_100828617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	520	Open in IMG/M
3300006050\|Ga0075028_100458042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300006050\|Ga0075028_100834794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300006052\|Ga0075029_100860612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	620	Open in IMG/M
3300006804\|Ga0079221_10486675	Not Available	796	Open in IMG/M
3300006804\|Ga0079221_11089049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	610	Open in IMG/M
3300006806\|Ga0079220_11237979	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300006904\|Ga0075424_101479916	Not Available	721	Open in IMG/M
3300006954\|Ga0079219_10165927	Not Available	1202	Open in IMG/M
3300006954\|Ga0079219_10395005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300006954\|Ga0079219_10555372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	824	Open in IMG/M
3300009094\|Ga0111539_11940056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	683	Open in IMG/M
3300009137\|Ga0066709_102041212	Not Available	794	Open in IMG/M
3300009148\|Ga0105243_10004480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	11042	Open in IMG/M
3300009156\|Ga0111538_10917694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1108	Open in IMG/M
3300009551\|Ga0105238_11044640	Not Available	839	Open in IMG/M
3300010043\|Ga0126380_11707889	Not Available	566	Open in IMG/M
3300010360\|Ga0126372_11563822	Not Available	697	Open in IMG/M
3300010366\|Ga0126379_13040572	Not Available	561	Open in IMG/M
3300010375\|Ga0105239_13460961	Not Available	513	Open in IMG/M
3300011269\|Ga0137392_11160498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	630	Open in IMG/M
3300012210\|Ga0137378_11669809	Not Available	544	Open in IMG/M
3300012514\|Ga0157330_1035454	Not Available	646	Open in IMG/M
3300012515\|Ga0157338_1032218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	674	Open in IMG/M
3300012519\|Ga0157352_1064092	Not Available	579	Open in IMG/M
3300012910\|Ga0157308_10022442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1430	Open in IMG/M
3300012916\|Ga0157310_10004377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3156	Open in IMG/M
3300012951\|Ga0164300_10144381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1107	Open in IMG/M
3300012971\|Ga0126369_11740568	Not Available	712	Open in IMG/M
3300012989\|Ga0164305_10027966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3050	Open in IMG/M
3300014324\|Ga0075352_1024581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Undibacter → Undibacter mobilis	1287	Open in IMG/M
3300017645\|Ga0182749_1139321	Not Available	602	Open in IMG/M
3300017792\|Ga0163161_10049353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3041	Open in IMG/M
3300017966\|Ga0187776_10659118	Not Available	736	Open in IMG/M
3300017973\|Ga0187780_10159115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1568	Open in IMG/M
3300017994\|Ga0187822_10204371	Not Available	660	Open in IMG/M
3300018060\|Ga0187765_10646706	Not Available	688	Open in IMG/M
3300018066\|Ga0184617_1239066	Not Available	544	Open in IMG/M
3300019361\|Ga0173482_10374642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	653	Open in IMG/M
3300020018\|Ga0193721_1162319	Not Available	530	Open in IMG/M
3300023069\|Ga0247751_1057651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	659	Open in IMG/M
3300023073\|Ga0247744_1007398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1387	Open in IMG/M
3300025580\|Ga0210138_1088159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	744	Open in IMG/M
3300025900\|Ga0207710_10050408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1868	Open in IMG/M
3300025910\|Ga0207684_10992166	Not Available	703	Open in IMG/M
3300025916\|Ga0207663_11218825	Not Available	606	Open in IMG/M
3300025945\|Ga0207679_11185421	Not Available	701	Open in IMG/M
3300025985\|Ga0210117_1044572	Not Available	723	Open in IMG/M
3300026023\|Ga0207677_11968810	Not Available	543	Open in IMG/M
3300026053\|Ga0208422_1027794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300026718\|Ga0207501_101405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	640	Open in IMG/M
3300026752\|Ga0207473_102958	Not Available	608	Open in IMG/M
3300026770\|Ga0207537_103701	Not Available	586	Open in IMG/M
3300026773\|Ga0207566_104056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	546	Open in IMG/M
3300026774\|Ga0207451_104927	Not Available	543	Open in IMG/M
3300026937\|Ga0207466_102538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	591	Open in IMG/M
3300026952\|Ga0207434_1013568	Not Available	654	Open in IMG/M
3300027122\|Ga0207538_1002082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Undibacter → Undibacter mobilis	1027	Open in IMG/M
3300027364\|Ga0209967_1045213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	672	Open in IMG/M
3300027410\|Ga0207541_104073	Not Available	618	Open in IMG/M
3300027433\|Ga0207618_101296	Not Available	599	Open in IMG/M
3300027614\|Ga0209970_1033550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	898	Open in IMG/M
3300027682\|Ga0209971_1075446	Not Available	820	Open in IMG/M
3300027717\|Ga0209998_10021531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1385	Open in IMG/M
3300027765\|Ga0209073_10333083	Not Available	609	Open in IMG/M
3300027907\|Ga0207428_11269445	Not Available	511	Open in IMG/M
3300028379\|Ga0268266_10443866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1232	Open in IMG/M
3300028379\|Ga0268266_12332760	Not Available	506	Open in IMG/M
3300028597\|Ga0247820_10465255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	856	Open in IMG/M
3300028711\|Ga0307293_10122515	Not Available	826	Open in IMG/M
3300028796\|Ga0307287_10122046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	987	Open in IMG/M
3300031057\|Ga0170834_104696160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	619	Open in IMG/M
3300031114\|Ga0308187_10316617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	590	Open in IMG/M
3300031231\|Ga0170824_107904201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	814	Open in IMG/M
3300031231\|Ga0170824_119609626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	525	Open in IMG/M
3300031235\|Ga0265330_10334254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1067432	Not Available	861	Open in IMG/M
3300031538\|Ga0310888_10062241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Undibacter → Undibacter mobilis	1787	Open in IMG/M
3300031538\|Ga0310888_10455214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	759	Open in IMG/M
3300031713\|Ga0318496_10192523	Not Available	1120	Open in IMG/M
3300031724\|Ga0318500_10159709	Not Available	1064	Open in IMG/M
3300031751\|Ga0318494_10079633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1778	Open in IMG/M
3300031792\|Ga0318529_10170863	Not Available	1004	Open in IMG/M
3300031820\|Ga0307473_11493842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	512	Open in IMG/M
3300031847\|Ga0310907_10490164	Not Available	655	Open in IMG/M
3300031892\|Ga0310893_10009060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2663	Open in IMG/M
3300031908\|Ga0310900_10298847	Not Available	1182	Open in IMG/M
3300031943\|Ga0310885_10140684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Undibacter → Undibacter mobilis	1144	Open in IMG/M
3300032017\|Ga0310899_10154400	Not Available	982	Open in IMG/M
3300032211\|Ga0310896_10047502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1716	Open in IMG/M
3300032783\|Ga0335079_10536323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1243	Open in IMG/M
3300033433\|Ga0326726_10954419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	832	Open in IMG/M
3300033486\|Ga0316624_10880621	Not Available	801	Open in IMG/M
3300033758\|Ga0314868_016162	Not Available	778	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.28%
Host-Associated	Host-Associated	19.82%
Engineered	Engineered	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.37%
Plants	Host-Associated → Plants	19.82%
Aquatic	Environmental → Aquatic	9.91%
Solid Waste	Engineered → Solid Waste	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.11%
Sediment	Environmental → Aquatic → Sediment	5.41%
Marine	Environmental → Aquatic → Marine	3.60%
Freshwater	Environmental → Aquatic → Freshwater	0.90%
Peat	Environmental → Terrestrial → Peat	0.90%
Grass	Engineered → Solid Waste → Grass	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.41%
Loam	Environmental → Terrestrial → Soil → Loam	4.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.50%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.90%
Sand	Environmental → Terrestrial → Soil → Sand	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%
Composting	Engineered → Solid Waste → Grass → Composting	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	18.02%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.21%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.90%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	9.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.50%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.60%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.80%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.90%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.90%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.90%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001228	Switchgrass rhizosphere microbial communities from Knoxville, Tennessee, USA - 12_joined	Host-Associated	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300017645	Enriched Miracle-Growth compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C Kraft MG (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025985	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026053	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026718	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A4-12 (SPAdes)	Environmental	Open in IMG/M
3300026752	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A4w-11 (SPAdes)	Environmental	Open in IMG/M
3300026770	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06K1-12 (SPAdes)	Environmental	Open in IMG/M
3300026773	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-11 (SPAdes)	Environmental	Open in IMG/M
3300026774	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01K1-12 (SPAdes)	Environmental	Open in IMG/M
3300026937	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A3-12 (SPAdes)	Environmental	Open in IMG/M
3300026952	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-10 (SPAdes)	Environmental	Open in IMG/M
3300027122	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027410	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A4-12 (SPAdes)	Environmental	Open in IMG/M
3300027433	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A3w-11 (SPAdes)	Environmental	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033758	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_00802000	2170459015	Switchgrass, Maize And Mischanthus Litter	MDSLRAALTWIKDLLNWLPDPVVALLILVIAVLMAFALHRWARKLVRRAFAERYPYHFLSSPRRAGSPRLRC
JGI11615J12901_104886901	3300000953	Soil	MDSLRAALTSVKNLLDWLPDLVVALLILAIAVLIALALHLWARKLVRRA
JGI10220J13317_103685121	3300001139	Soil	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHRWASKLVRRTIAGRYPFIFSVFSQTHGLT
SwM_1447121	3300001228	Switchgrass Rhizosphere	MDSLKAALTSVKDLLDWLPDLVVALLILAIAVLFALALHRW
Ga0055437_103149191	3300004009	Natural And Restored Wetlands	MDSLRAALTSVKNLLDWLPDLVVALLIFAIAVLFALVLHRWARKLVRRAIAGRYPFVFSV
Ga0062591_1026181971	3300004643	Soil	MDSLRAALTWVKDLLDWLPDPVVALLILGIMVLVALALHSWARKLVRRTISGRYPFIFSV
Ga0066817_10236752	3300005146	Soil	MDSLKAALTSVKDLLDWLPDLVVALLILAIAVLFALALHR
Ga0066808_10370851	3300005159	Soil	MDSLRTALTWVKDLLDWLPDPAVALLILAFAVLLALALHRWARKLVRRAFAERYPHVFSF
Ga0066823_100017441	3300005163	Soil	MDELRAALTKLKNLLDWLPDPLVALMILGIAVLVALALHRWVSKLA
Ga0066809_101132522	3300005168	Soil	MDSLRAALTRIKDLLDWLPDAVVALLVLAIAVLIALALHRWARKLVR
Ga0068996_101322691	3300005218	Natural And Restored Wetlands	MNNEGRMDSLRAALTSIKNLLDWLPDLVVALLMFAIAVLFALALHRWARKLVRRAIA
Ga0070661_1012713562	3300005344	Corn Rhizosphere	MDSLRAALTSVKDLLDWLPDPVVALLILAIAVLFALALHRWARKLIRRAFGERYPY
Ga0070701_108488242	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MDSLRTALTWVKDLLDWLPDPVVALLILGIVVLVALALHRWARKLVRRTLSGR
Ga0070706_1012009532	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDSLKAALTSVKDLLDWLPDLVVALLILAIAVLFALALHRWARKLVRRAIAGRYPFVFSV
Ga0070699_1007314843	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MDSLRTALTWVKDLLKWLPDPAVALLILAFAVLLALALHRWARKLVRRAF
Ga0068859_1005996693	3300005617	Switchgrass Rhizosphere	MDSLRTALTWVKDLLDWLPDPVVALLILGIVVLVALALHRWARKLVR
Ga0075023_1001342231	3300006041	Watersheds	MDSLRAALTRIKDLLDWLPDAVVALLVLAIAVLIALALHRWARKLVRRALAGRY
Ga0075024_1008286171	3300006047	Watersheds	MDSLRAALTRIKDLLDWLPDAVVALLILAIAVLIALALHRWARKLVRRAFAHRYPTLFSVFTQTRGLS
Ga0075028_1004580422	3300006050	Watersheds	MDSLRAALTWIKDLLDWLPDPVVALLILGIAVLIALAMHRWAR*
Ga0075028_1008347941	3300006050	Watersheds	MDSLRAALTWIKDLLDWLPDAVVALLVLAIAVLIALALHRWARKLVRRAL
Ga0075029_1008606122	3300006052	Watersheds	MDSIRHALAAIKDLLVWLPDPVVAAVILALAVLIAFSLHRLVRKLVRRLLAQR
Ga0079221_104866753	3300006804	Agricultural Soil	MDSLRAALTWIKDLLNWLPDPVVALLILVIAVLMAFA
Ga0079221_110890492	3300006804	Agricultural Soil	MDSLRAALTWIKDLLDWLPQPVVALIILLIAVLIALLLHRWARKLMRRAFSQRYPYVFSVFTQTRGL
Ga0079220_112379791	3300006806	Agricultural Soil	MDSLRAALTWIKDLLDWLPQPVVALIILLIAVLIALLLHRWARKLMRRAFSQRYPY
Ga0075424_1014799161	3300006904	Populus Rhizosphere	MDSLRAALTSVKDLLDWLPDPVVALLILAIAVLFALALHRWA
Ga0079219_101659271	3300006954	Agricultural Soil	MDSLRAALTWIKDLLNWLPDPVVALLILVIAVLMAFALHRWARKLVRRAFAE
Ga0079219_103950051	3300006954	Agricultural Soil	MDSLRAALTSVKDLLDWLPDPVVALFVFAIAVLVALALHRWARRLARRARSR
Ga0079219_105553722	3300006954	Agricultural Soil	VLTKLKDLLDWLPDPLVALMILGIAVLVALALHRWVSKLARRALSGRYPYLYSAF
Ga0111539_119400561	3300009094	Populus Rhizosphere	MDSLRTALTWVKDLLDWLPDPVVALLILAIAVLVALALHRWARKLVRRTVAGRYP
Ga0066709_1020412121	3300009137	Grasslands Soil	MDSLRAALDWIKDLLDWLPDPVVALLILAMAALFALALHRWMRKLVRRALAHRYPY
Ga0105243_100044801	3300009148	Miscanthus Rhizosphere	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHRWASKLVRRTIAGRH
Ga0111538_109176942	3300009156	Populus Rhizosphere	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHRWASKLVRRTIAGR
Ga0105238_110446403	3300009551	Corn Rhizosphere	MDSLRAALTSVKDLLDWLPDPVVALLILAIAVLFALAL
Ga0126380_117078891	3300010043	Tropical Forest Soil	MDSLRTALTWIKDLFDWLPEPAVALLIFAIAVLLALALHRWASKLIRR
Ga0126372_115638221	3300010360	Tropical Forest Soil	MDELRAALTKIKNLLDWLPDPLVALMILGIAMLVALALHRWVRKLARRALSGRY
Ga0126379_130405721	3300010366	Tropical Forest Soil	MKAVMESLRAALTWVKDLLDWLPDPVVALLILGIAVLAAFALH
Ga0105239_134609611	3300010375	Corn Rhizosphere	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHRWASKLVRRTIAGRYPFIF
Ga0137392_111604981	3300011269	Vadose Zone Soil	MDSLRAALTSIKDLLEWLPDPVVALVILAIAVLVALALHRWARTLVRGALAGRYP
Ga0137378_116698091	3300012210	Vadose Zone Soil	MDSLRAALTWIKDLLEWLPDPVVALVILAIAVLIAIALHQWARTLARRALAGRYPFLFST
Ga0157330_10354541	3300012514	Soil	MDELRAALTKLKNLLDWLPDPLVALMILGIAVLVALALHRW
Ga0157338_10322182	3300012515	Arabidopsis Rhizosphere	MDSLKAALTSVKDLLDWLPDLVVALLILAIAVLFALAL
Ga0157352_10640923	3300012519	Unplanted Soil	MDELRAALTKLKNLLDWLPDALVALMILGIAVLVALGLHRWVSKLARRALSGRYPYLYSAFNKT
Ga0157308_100224421	3300012910	Soil	MDSLKAALTSVKDLLDWLPDLVVALLILAIAVLFALALHRWA
Ga0157310_100043776	3300012916	Soil	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHRWASKLVRR
Ga0164300_101443811	3300012951	Soil	MDELRAALTKTKNLLDWLPDPLVAFMILGIAMLVALALHRWVSKL
Ga0126369_117405682	3300012971	Tropical Forest Soil	MDDMNAVMESLRAALTWIKDLLDWLPDPVVALLILAIAVLVALALHQWARKLVRSAVAERYPFIFS
Ga0164305_100279665	3300012989	Soil	MDELRAALTKLKNLLDWLPDPLVALMILGIAVLVA
Ga0075352_10245811	3300014324	Natural And Restored Wetlands	MDSLRAALTWIKNLLDWLPDPVVALLIFAIAVLVALALHRWARKLAHRTLADR
Ga0182749_11393211	3300017645	Compost	MDSIRAALTHLNDWLNWLPDLVVAVLILAFAVAIALALHYW
Ga0163161_100493535	3300017792	Switchgrass Rhizosphere	MDELRAALTKLKNLLDWLPDPLVALMILGIAVLVALALHRWVSKLARRALSGRYPYLYSAFNKTSGL
Ga0187776_106591181	3300017966	Tropical Peatland	MDSLRAALTWIKDLLNWLPDSVVALLILAFAVLIALALDRWIQTLVRGAFASRYP
Ga0187780_101591153	3300017973	Tropical Peatland	MDSLRTALTWIKDLLDWLPDPVVALLILAIAVLVALALHRWARKLVRSTLAARYPYIFSTFTQT
Ga0187822_102043711	3300017994	Freshwater Sediment	MDLLRTALTWIKDLLDWLPDPVVALLILVIAVLVA
Ga0187765_106467061	3300018060	Tropical Peatland	MDSLRAALTSIKNLVDWLPDPVVALLILALAVLVALALHGWARKLVRR
Ga0184617_12390661	3300018066	Groundwater Sediment	MDALRAALTKIKDLLDWLPDPVVALIILGITVLVALALHRWVRKL
Ga0173482_103746421	3300019361	Soil	MDSLRTALTWVKDLLDWLPDPVVALFILAIAVLFALAIHRWARKLVRRAVAGRYPFVFSVLT
Ga0193721_11623191	3300020018	Soil	MDALRAALTKIKDLLDWLPDPVVALIILAITVLVALALHRWVRKLARRALAGRYPYLYSTFNQTSGLS
Ga0247751_10576511	3300023069	Soil	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHRW
Ga0247744_10073981	3300023073	Soil	MDSLKAALTSVKDLLDWLPDLVVALLILAIAVLFALALHRWARKLVRRAIAGRYPFVFSVFTQTRG
Ga0210138_10881592	3300025580	Natural And Restored Wetlands	MDSLRAALTSVKNLLDWLPDLVVALLIFAIAVLFALVLHRWARKLVRR
Ga0207710_100504081	3300025900	Switchgrass Rhizosphere	MDELRAALTKLKNLLDWLPDPLVALMILGIAVLVALALHRWVSKLARRALSGRYPYLYSA
Ga0207684_109921661	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDSLKAALTSVKDLLDWLPDLVVALLILAIAVLFALALHRWARKLVRRAIAGRYPFVFSVFTQT
Ga0207663_112188253	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MDSLRAALTWIKDLLDWLPDPVVALLILVIAVLIAF
Ga0207679_111854212	3300025945	Corn Rhizosphere	MDSLRAALTSVKDLLDWLPDPVVALLILAIAVLFALALHRWARKLIRRAFGERYPYMFSV
Ga0210117_10445722	3300025985	Natural And Restored Wetlands	MNNEGRMDSLRAALTSIKNLLDWLPDLVVALLMFAIAVLFALALHRWARKLVRRAIAGR
Ga0207677_119688101	3300026023	Miscanthus Rhizosphere	MDSLKAALTSVKDLLDWLPDLVVALLILAIAVLFALALHRWARKLFRRAIA
Ga0208422_10277942	3300026053	Natural And Restored Wetlands	MDSLRATLTSIKNLLDWLPDLVVALLIFAIAVLFALVLHRWARKLVRRAIAGRYPF
Ga0207501_1014052	3300026718	Soil	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLA
Ga0207473_1029582	3300026752	Soil	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHR
Ga0207537_1037012	3300026770	Soil	MDSLKAALTSVKDLLDWLPDLVVALLILAIAVLFALALHRWARKLVRRAIAGRYPFV
Ga0207566_1040562	3300026773	Soil	MDSLKAALTSVKDLLDWLPDLVVALLILAIAVLFALALHRWARKLVRRAIAGRYPF
Ga0207451_1049271	3300026774	Soil	MDSLKAALTSVKDLLDWLPDLVVALLILAIAVLFALALHRWARKLFRRAIAGRYPFVFSVFT
Ga0207466_1025382	3300026937	Soil	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHRWAS
Ga0207434_10135682	3300026952	Soil	MDSLRAALTSIKNLLDWLPDLVVALLILAIAVLFA
Ga0207538_10020821	3300027122	Soil	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHRWASKLVRRTIA
Ga0209967_10452131	3300027364	Arabidopsis Thaliana Rhizosphere	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHRWASK
Ga0207541_1040732	3300027410	Soil	MDSLKAALTSVKDLLDWLPDLVVALLILAIAVLFALALHRWARKLVRRAIAGRYPFVFSVFT
Ga0207618_1012962	3300027433	Soil	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHRWASKLVRRTIAGRYPFIFSVFSQTHG
Ga0209970_10335501	3300027614	Arabidopsis Thaliana Rhizosphere	MDSLRAALTSIKNLLDWLPDLVVALLILAIAVLFALALHRWARKLVR
Ga0209971_10754461	3300027682	Arabidopsis Thaliana Rhizosphere	MDSLRTALTWVKDLLKWLPDPAVALLILAFAVLLALALHRWASRLVRHAFAERYPYVFSFFMQTR
Ga0209998_100215311	3300027717	Arabidopsis Thaliana Rhizosphere	MDSLRAALTSVKNLLDWLPDLVVALLILAIAVLIALAFHLWA
Ga0209073_103330831	3300027765	Agricultural Soil	MDSLRAALTWIKDLLNWLPDPVVALLILVIAVLMAFALHRWARKLV
Ga0207428_112694452	3300027907	Populus Rhizosphere	MDSLRTALTWVKDLLDWLPDPVVALLILAIAVLVALALHRWARKLVRRT
Ga0268266_104438661	3300028379	Switchgrass Rhizosphere	MDELRAALTKLKNLLDWLPDPLVALMILGIAVLVALALHRWVSKLARRALS
Ga0268266_123327601	3300028379	Switchgrass Rhizosphere	MDSLKAALTSVKDLLDWMPDLVVALLILAIAVLFALALHRW
Ga0247820_104652552	3300028597	Soil	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHRWASKLVRRTIARIS
Ga0307293_101225151	3300028711	Soil	MDALRAALTKIKDLLDWLPDPVVALIILAITVLVALALHRWVRKLARRALAGRYP
Ga0307287_101220462	3300028796	Soil	MDSLRAALTWIKDLLDWLPDQVVALVILAIAVLVALALHRWVGKLARRALAGRYPYVFSTYMQTRGLS
Ga0170834_1046961602	3300031057	Forest Soil	MDSLRAALTWIKDLLEWLPDPVVALVILAIAVLVALALHQWTRKLVRKALAGRYPY
Ga0308187_103166172	3300031114	Soil	MDSLRAALTWIKDLLDWLPDQVVALVILAIAVLVALALHRWVGKLARRALAGRYPYVFSTYM
Ga0170824_1079042012	3300031231	Forest Soil	MDSLRAALTKVKDLLDWLPDPLVAVMILGIAVLVALALHRWARKLARRAAD
Ga0170824_1196096261	3300031231	Forest Soil	MESIRAALTWIKDLLNWLPDPVVALLILAIAVLIALALHRWARKLVRSTLAGRYPYVF
Ga0265330_103342542	3300031235	Rhizosphere	MDSLRNALDTVRVWLDWLPDPIVAALILLIAIGFALILHRLLR
(restricted) Ga0255312_10674321	3300031248	Sandy Soil	MILNAMDSLRTALTWVKDLLKWLPDPAVALLILAFAVLLALALDRWASKLVHRAFA
Ga0310888_100622411	3300031538	Soil	MDELRAALTKIKNLLDWLPDPLVALMILGIAVLVALALHRWVSKLARRALSGRYP
Ga0310888_104552142	3300031538	Soil	MDSLRTALTWVKDLLDWLPDPAVALLILAFAVLLALALHRWARKLVRRAFAERYPYVFSFFAQSR
Ga0318496_101925231	3300031713	Soil	MDELRAALTKIKNLLDWLPDPLVALMILGIAMLVALALHRWVRKLARRALSGRYPYLYSAFN
Ga0318500_101597091	3300031724	Soil	MDELRAALTKIKNLLDWLPDPLVALMILGIAMLVALALHRWVRKLARRALSGRYPY
Ga0318494_100796333	3300031751	Soil	MDELRAALTKIKNLLDWLPDPLVALMILGIAMLVALALHRWVRKLARRALSGRYPYLYS
Ga0318529_101708633	3300031792	Soil	MDELRAALTKIKNLLDWLPDPLVALMILGIAMLVALALHRWVRKLARRALSGRYPYLYSAFNQTS
Ga0307473_114938422	3300031820	Hardwood Forest Soil	MDSLRAALTWIKDLLNWLPDQVVALLILAIAVLLALALHRWMQTMVRGA
Ga0310907_104901641	3300031847	Soil	VLTKLKDLLDWLPDPLVALMILGIAVLVALALHRWVSKLA
Ga0310893_100090605	3300031892	Soil	MDSLRAALTWIKDLLNWLPEPVVALLILGIAVLLALALHRWASKLVRRTIAGRHPFIFSV
Ga0310900_102988473	3300031908	Soil	MDELRAALTKLKNLLDWLPDALVALMILGIAVLVALALHRWVSKLARRALSGRYPYLYSAFN
Ga0310885_101406841	3300031943	Soil	MDSLRTALTWVKDLLDWLPDPAVALLILAFAVLLALALHRWARK
Ga0310899_101544001	3300032017	Soil	VLTKLKDLLDWLPDPLVALMILGIAVLVALALHRW
Ga0310896_100475021	3300032211	Soil	MDELRAALTKLKNLLDWLPDPLVALMILGIAVLVALALHRWVSKLAR
Ga0335079_105363231	3300032783	Soil	MESLRAALTWVRTLLAWLPNPVVALLILAIAVLAALILYGWARKLVRRTFAARYPYVYS
Ga0326726_109544192	3300033433	Peat Soil	MQSLRAALTWIKDLLDWLPDPVVALLILAIAVLVALALHRWARKMVRSTLAGRYPFVFSTFTQTRGL
Ga0316624_108806211	3300033486	Soil	MDSIRHALTAIKVLLVWLPDPVVAAVILALAVLIAISLHRLVRKLVRRLLAQRNPFIFS
Ga0314868_016162_609_776	3300033758	Peatland	MDSLRAALTWIKDLLDWLPDPVVALLILGIAMLLALALHQWARKLVRRAFAGRYPY

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters