Metagenome / Metatranscriptome Family F084715

Overview

Basic Information

• Family ID: F084715
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 112
• Average Sequence Length: 46 residues
• Representative Sequence: TKVIPIIASIIFIFELEVKRPTAHVNITRDITLGFINKYKDLI
• Number of Associated Samples: 87
• Number of Associated Scaffolds: 112

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 2.73 %
• % of genes near scaffold ends (potentially truncated): 93.75 %
• % of genes from short scaffolds (< 2000 bps): 91.96 %
• Associated GOLD sequencing projects: 82
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (78.571 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (43.750 % of family members)
• Environment Ontology (ENVO): Unclassified (83.036 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (80.357 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 49.30%
  β-sheet: 0.00%
  Coil/Unstructured: 50.70%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF03626	COX4_pro	38.39
PF00510	COX3	13.39
PF01040	UbiA	9.82
PF00115	COX1	3.57
PF14821	Thr_synth_N	0.89
PF04442	CtaG_Cox11	0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3125	Heme/copper-type cytochrome/quinol oxidase, subunit 4	Energy production and conversion [C]	38.39
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	13.39
COG3175	Cytochrome c oxidase assembly protein Cox11	Posttranslational modification, protein turnover, chaperones [O]	0.89

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
All Organisms	root	All Organisms	21.43 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
cellular organisms	root	All Organisms → cellular organisms	21.43 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.43 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.54 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.64 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	10.71 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	10.71 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	10.71 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	9.82 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Candidatus Pelagibacter sp. IMCC9063	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	9.82 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000148|SI47jul10_100mDRAFT_c1029978	Not Available	810
3300000259|LP_J_08_P26_500DRAFT_1049791	Not Available	536
3300000966|JGI12025J13092_106326	Not Available	544
3300001683|GBIDBA_10089444	Not Available	992
3300005402|Ga0066855_10064888	Not Available	1120
3300005427|Ga0066851_10153474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734
3300005427|Ga0066851_10233732	Not Available	574
3300005605|Ga0066850_10148368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865
3300005953|Ga0066383_10120120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787
3300006013|Ga0066382_10202156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687
3300006076|Ga0081592_1141677	Not Available	874
3300006166|Ga0066836_10061287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	2146
3300006166|Ga0066836_10222093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1124
3300006166|Ga0066836_10892323	Not Available	537
3300006306|Ga0068469_1235381	Not Available	584
3300006308|Ga0068470_1319572	Not Available	929
3300006308|Ga0068470_1451011	All Organisms → cellular organisms → Bacteria	914
3300006311|Ga0068478_1140882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	3361
3300006313|Ga0068472_10404592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1766
3300006335|Ga0068480_1376474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724
3300006336|Ga0068502_1789911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1258
3300006347|Ga0099697_1297433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695
3300006414|Ga0099957_1281644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1154
3300006567|Ga0099958_1168247	Not Available	1433
3300006902|Ga0066372_10960555	Not Available	521
3300007283|Ga0066366_10141854	Not Available	955
3300007513|Ga0105019_1241035	Not Available	841
3300007558|Ga0102822_1026097	All Organisms → cellular organisms → Bacteria → Proteobacteria	1401
3300007760|Ga0105018_1114242	Not Available	946
3300008249|Ga0105353_1128088	Not Available	601
3300008627|Ga0115656_1067714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1813
3300008738|Ga0115660_1085063	Not Available	1583
3300009049|Ga0102911_1075690	Not Available	971
3300009104|Ga0117902_1292542	Not Available	1515
3300009130|Ga0118729_1147670	Not Available	1062
3300009172|Ga0114995_10649821	Not Available	576
3300009172|Ga0114995_10753892	Not Available	533
3300009173|Ga0114996_10916705	Not Available	627
3300009409|Ga0114993_10412300	Not Available	1014
3300009409|Ga0114993_10500050	Not Available	903
3300009409|Ga0114993_10930045	Not Available	621
3300009409|Ga0114993_11015359	Not Available	590
3300009420|Ga0114994_10684778	Not Available	669
3300009420|Ga0114994_10791256	Not Available	616
3300009420|Ga0114994_11019278	Not Available	535
3300009420|Ga0114994_11102269	Not Available	512
3300009420|Ga0114994_11102880	Not Available	512
3300009425|Ga0114997_10336813	Not Available	827
3300009425|Ga0114997_10564771	Not Available	602
3300009432|Ga0115005_10562663	Not Available	911
3300009432|Ga0115005_11437007	Not Available	564
3300009472|Ga0115554_1237570	Not Available	731
3300009512|Ga0115003_10142407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1458
3300009512|Ga0115003_10411201	Not Available	795
3300009512|Ga0115003_10736839	Not Available	573
3300009526|Ga0115004_10067599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2240
3300009526|Ga0115004_10285051	Not Available	981
3300009705|Ga0115000_10116655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1791
3300009706|Ga0115002_10101742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	2348
3300009706|Ga0115002_10789554	Not Available	664
3300009706|Ga0115002_10985951	Not Available	579
3300009785|Ga0115001_10816302	Not Available	562
3300009785|Ga0115001_10960365	Not Available	512
3300009790|Ga0115012_11404973	Not Available	596
3300010883|Ga0133547_12146111	Not Available	1016
3300012950|Ga0163108_10093840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1909
3300017768|Ga0187220_1119192	Not Available	798
3300020322|Ga0211563_1114899	Not Available	546
3300020332|Ga0211502_1088887	Not Available	584
3300020353|Ga0211613_1118155	Not Available	627
3300020376|Ga0211682_10368185	Not Available	528
3300020412|Ga0211552_10184939	Not Available	740
3300020413|Ga0211516_10281120	Not Available	750
3300020426|Ga0211536_10406959	Not Available	530
3300020466|Ga0211714_10554727	Not Available	539
3300021065|Ga0206686_1126871	Not Available	755
3300021352|Ga0206680_10187458	Not Available	802
3300021791|Ga0226832_10439796	Not Available	554
3300025195|Ga0208062_104312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1735
3300025200|Ga0208569_1005089	Not Available	1244
3300026080|Ga0207963_1053589	Not Available	1032
3300026253|Ga0208879_1197412	Not Available	782
3300026260|Ga0208408_1108235	Not Available	816
3300026321|Ga0208764_10106810	Not Available	1442
3300027755|Ga0209034_10022653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	2422
3300027788|Ga0209711_10046257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	2429
3300027844|Ga0209501_10772815	Not Available	508
3300027847|Ga0209402_10100338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	2002
3300028192|Ga0257107_1185740	Not Available	596
3300028487|Ga0257109_1038337	Not Available	1567
3300028487|Ga0257109_1159615	Not Available	656
3300031542|Ga0308149_1049490	Not Available	529
3300031775|Ga0315326_10790478	Not Available	591
3300031801|Ga0310121_10746497	Not Available	515
3300031802|Ga0310123_10294383	Not Available	1068
3300031802|Ga0310123_10916659	Not Available	514
3300031803|Ga0310120_10249660	Not Available	953
3300031804|Ga0310124_10293707	Not Available	984
3300031811|Ga0310125_10111600	Not Available	1436
3300031886|Ga0315318_10591038	Not Available	629
3300032006|Ga0310344_10404232	Not Available	1172
3300032006|Ga0310344_10506844	Not Available	1035
3300032006|Ga0310344_11095056	Not Available	665
3300032011|Ga0315316_11038865	Not Available	665
3300032032|Ga0315327_10538842	Not Available	723
3300032088|Ga0315321_10178296	Not Available	1408
3300032278|Ga0310345_10373004	Not Available	1339
3300032360|Ga0315334_10923132	Not Available	756
3300032360|Ga0315334_11808458	Not Available	518
3300034695|Ga0372840_216127	Not Available	568

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	69.64%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.71%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.93%
Coastal	Environmental → Aquatic → Marine → Coastal	6.25%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.68%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.89%
Strait	Environmental → Aquatic → Marine → Strait	0.89%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	58.93%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	8.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.93%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	6.25%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.25%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.46%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.79%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	1.79%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.89%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	43.75%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	8.04%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	8.04%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.04%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	6.25%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	6.25%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.46%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	3.57%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.68%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.79%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.89%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.89%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	0.89%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.89%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.89%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	0.89%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.89%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.89%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000148	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 100m	Environmental
3300000259	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_J_08_P26_500	Environmental
3300000966	Marine microbial communities from the Deep Atlantic Ocean - MP0145	Environmental
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental
3300005953	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_A	Environmental
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental
3300006076	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A	Environmental
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental
3300006306	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500m	Environmental
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental
3300006311	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000m	Environmental
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental
3300006567	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770m	Environmental
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental
3300007283	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_B	Environmental
3300007513	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um, replicate b	Environmental
3300007558	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733	Environmental
3300007760	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um, replicate a	Environmental
3300008249	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN10B Hudson Canyon	Environmental
3300008627	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 2.7-0.2um	Environmental
3300008738	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2um, replicate b	Environmental
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental
3300009109	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate b	Environmental
3300009130	Combined Assembly of Gp0139511, Gp0139512	Environmental
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental
3300010883	western Arctic Ocean co-assembly	Environmental
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental
3300020322	Marine microbial communities from Tara Oceans - TARA_B100002003 (ERX556138-ERR599051)	Environmental
3300020332	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX555956-ERR598975)	Environmental
3300020353	Marine microbial communities from Tara Oceans - TARA_B100000686 (ERX556093-ERR598998)	Environmental
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental
3300020384	Marine microbial communities from Tara Oceans - TARA_B000000441 (ERX556023-ERR599110)	Environmental
3300020412	Marine microbial communities from Tara Oceans - TARA_B100001167 (ERX556053-ERR599047)	Environmental
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental
3300020426	Marine microbial communities from Tara Oceans - TARA_B100000378 (ERX555992-ERR599112)	Environmental
3300020466	Marine microbial communities from Tara Oceans - TARA_B100001540 (ERX556059-ERR598968)	Environmental
3300021065	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015	Environmental
3300021352	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015	Environmental
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental
3300025195	Marine microbial communities from the Deep Atlantic Ocean - MP0261 (SPAdes)	Environmental
3300025200	Marine microbial communities from South of Eden, South Pacific Ocean - MP1434 (SPAdes)	Environmental
3300026080	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_NADW_ad_2500m_LV_A (SPAdes)	Environmental
3300026253	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)	Environmental
3300026260	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes)	Environmental
3300026321	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)	Environmental
3300027755	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - 250m_A/KNORR_S2/LV (SPAdes)	Environmental
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental
3300027847	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)	Environmental
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental
3300028487	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000m	Environmental
3300031542	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_331_5m (Metagenome Metatranscriptome)	Environmental
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental
3300031811	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8	Environmental
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SI47jul10_100mDRAFT_10299783	3300000148	Marine	TKIMPIIASEIFVLELDVKKPTAHVKITRDITLGFINKYKDLIKLFKSN*
LP_J_08_P26_500DRAFT_10497912	3300000259	Marine	FKHPAAPEPKATKIIAIIASKVFRFGLEVKNPTAQVNTTRDITLGFVSDINDLI*
JGI12025J13092_1063263	3300000966	Deep Ocean	ATKVIPIIASIIFVLEFEVNNPTAHVNITRDITLGFISNMKDFI*
GBIDBA_100894444	3300001683	Hydrothermal Vent Plume	IASIIFIFELEVNNPTAHVNMTRDITLGFISNIKDFI*
Ga0066855_100648881	3300005402	Marine	KIIPIIASEIFIFELEVNNPTAQVNITRDITLGFMSDTKDLI*
Ga0066851_101534743	3300005427	Marine	PAAPEPMATKIIAMIASKVFKFGLEVKNPTAQVNITRDITLGFMSDINDLI*
Ga0066851_102337322	3300005427	Marine	IFKHPAAPEPNATKIIHVIALNIFVFELDVNKPTAQVNITRDITLGFINSNRDFI*
Ga0066850_101483681	3300005605	Marine	IFKHPAAPDPKATKIIHIIALVMLVLELDVNSPTAHVNITRDITLGFINNNNDFM*
Ga0066383_101201203	3300005953	Marine	AAPAPKATKVIPIIASIIFVLEFEVNNPTAHVNITRDITLGFISNMKDFI*
Ga0066382_102021563	3300006013	Marine	APAPNATKIIPIIASEIFIFELEVNNPTAQVNTTRDITLGFMSDTKDLI*
Ga0081592_11416771	3300006076	Diffuse Hydrothermal Fluids	ATKVIPIIASVIFIFEFEVNNPTAHVNITRDITLGFMSDTKDLI*
Ga0066836_100612875	3300006166	Marine	IALNIFVFELDVNKPTAQVNITRDITLGFINSNRDFI*
Ga0066836_102220931	3300006166	Marine	PAAPEPMATKIIAMIASKVFKFGLEVKNPTAQVNITRDITLGFISDINDLI*
Ga0066836_108923231	3300006166	Marine	APIATKVIEIITSKVFRVGLEVKNPTAQVNITRDITLGFISEIRDLV*
Ga0068469_12353811	3300006306	Marine	IYRATKNIPIIASIIFILEFEVNNPTAHVNMTRDITLGFINNIKDFI*
Ga0068470_13195723	3300006308	Marine	LTACAPKATKIIPIIASVIFVFEFEVNNPTAHVNITRDITLGFISDIKDFI*
Ga0068470_14510111	3300006308	Marine	ASKVFRFGLEVKNPTAHVNITRDITLGFMSDIKDLT*
Ga0068478_11408825	3300006311	Marine	IASVIFVFEFEVNNPTAHVNITRDITLGFISNIKDFI*
Ga0068472_104045921	3300006313	Marine	PIIASIIFVFELEVKNPTAQVNITRDITLGFMSDINDLA*
Ga0068480_13764741	3300006335	Marine	KHPAAPAPNATKNIPIIASIIFIFELEVNNPTAHVNMTRDITLGFINNIKDFI*
Ga0068502_17899114	3300006336	Marine	PAPKATKVIPIIASVIFVFEFEVNNPTAHVNITRDITLGFISNIKDFI*
Ga0099697_12974331	3300006347	Marine	AAPAPKATKIIPIIASVIFVFEFEVNNPTAHVNITRDITLGFISDIKDFI*
Ga0099957_12816444	3300006414	Marine	APAPKATKIIPIIASVIFVFEFEVNNPTAHVNITRDITLGFISNIKDFI*
Ga0099958_11682471	3300006567	Marine	APKATKIIPIIASVIFVFEFEVNNPTAHVNITRDITLGFISDIKDFI*
Ga0066372_109605551	3300006902	Marine	FKHPAAPAPNATKIIPIIASEIFIFEFEVNNPTAHVNITRDITLGFMSDTKDLI*
Ga0066366_101418542	3300007283	Marine	MFKHPAAPEPNATKIIHNIALYTFVIEFDVSKPTAQVNITRDITLGFINSIKDFI*
Ga0105019_12410351	3300007513	Marine	YHIFKHPAAPEPNATIIIHVIALNIFVFELDVNKPTAQVNITRDITLGFINSNKDFI*
Ga0102822_10260971	3300007558	Estuarine	MASIMPIFELEVKRPTAHVNITRDITLGFIKRYKDLINSLKSSET
Ga0105018_11142421	3300007760	Marine	AMIASKVFKFGLEVRNPTAQVNITRDITLGFMSDTNDLI*
Ga0105353_11280883	3300008249	Methane Seep Mesocosm	PAAPEPKATKVMAIIASKVFRFGLEVKNPTAQVNTTRDITLGFISDINDLI*
Ga0115656_10677141	3300008627	Marine	IATKIIEIIASKVFKLGSEVKNPTAQVNITRDITLGFISEIKDFV*
Ga0115660_10850631	3300008738	Marine	KATKVIAIIASKVFKFGLEVKKPTAQVNITRDITLGFMRDINDFK*
Ga0102911_10756901	3300009049	Estuarine	MPIIASIMPIFELEVKRPTAHVNITRDITLGFINRYKD
Ga0117902_12925421	3300009104	Marine	PAAPDPKATKVIAIIASKVFKFGLEVKKPTAQVNITRDITLGFMRDINDFK*
Ga0117922_11991431	3300009109	Marine	IIASAILVFEPDVKNPTAHVKITRDITLGFISCNKDLI*
Ga0118729_11476704	3300009130	Marine	ATKIIHIIALSMLMFALEVNSPTAHVNITRDITLGFINNNNDFI*
Ga0114995_106498211	3300009172	Marine	MALTISILELEVKRPTAHVKTTRDITLGFINKYKDLI*
Ga0114995_107538921	3300009172	Marine	KVIPIIASIISIFELEVKRPTAHVKITRDITLGFINKYKDLI*
Ga0114996_109167051	3300009173	Marine	VIASVIFIFEFEVKKPTAHVNITSDITLGFMSKYKDLI*
Ga0114993_104123001	3300009409	Marine	IAILVIASVIFIFEFEVKKPTAHVNITRDITLGFISKYKDLI*
Ga0114993_105000501	3300009409	Marine	NIPIIASVILVFELEVKKPTAHVNITRDMTLGFINKYKDFI*
Ga0114993_109300451	3300009409	Marine	NIPVIASAIFVFELEVKKPTAHVNITRDITLGFINKYNDLI*
Ga0114993_110153591	3300009409	Marine	IVLIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0114994_106847781	3300009420	Marine	APAPNATKVIPIIASIISIFELEVKRPTAHVKITRDITLGFISKYKDLI*
Ga0114994_107912561	3300009420	Marine	MPIIASVMPVFELEVKKPTAHVNITRDMTLGFISKYKDL
Ga0114994_110192781	3300009420	Marine	MASIMPIFELEVKRPTAHVNITRDITLGFIKRYKDLINSLKSSETV
Ga0114994_111022691	3300009420	Marine	IASIVFIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0114994_111028802	3300009420	Marine	PIIASIVFIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0114997_103368131	3300009425	Marine	MASLIFIFELEVKRPTAHVKITRDITLGFINEYKDLI*
Ga0114997_105647713	3300009425	Marine	PAPRATKVIPIIASIVFIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0115005_105626632	3300009432	Marine	MALIISILELEVKRPTAHVKTTRDITLGFINKYNDLI*
Ga0115005_114370071	3300009432	Marine	PAPNATKVIPIIASIISIFELEVKRPTAHVKITRDITLGFISKYKDLI*
Ga0115554_12375702	3300009472	Pelagic Marine	MASIMPIFELEVKRPTAHVNITRDITLGFIKRYKDLIN
Ga0115003_101424071	3300009512	Marine	MFKHPAAPAPKATRVIPIIASIVFIFEIEVKRPTAHVNITRDITLGFISKYKDLI
Ga0115003_104112011	3300009512	Marine	ASIVFIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0115003_107368391	3300009512	Marine	TKVMPIMALIISILELEVKRPTAHVKTTRDITLGFINKYNDLI*
Ga0115004_100675993	3300009526	Marine	MALIISILELEVKRPTAHVKTTRDITLGFINKYKDLI*
Ga0115004_102850514	3300009526	Marine	PAPKATKVIPIMASKTFIFELEVRRPTAHVNITRDITLGFINKYKDLI*
Ga0115000_101166555	3300009705	Marine	IASIILVFELEVKKPTAHVNITRDITLGFINRYKDLI*
Ga0115002_101017421	3300009706	Marine	APAPKATIAILVIASVIFIFEFEVKKPTAHVNITRDITLGFISKYKDLI*
Ga0115002_107895541	3300009706	Marine	PAAPATKATKNIPVIASAIFVFELEVKKPTVHVNITRDITLGFINKYKDLI*
Ga0115002_109859511	3300009706	Marine	TKVIPIMASIIFIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0115001_108163021	3300009785	Marine	MFKHPAAPAPKATKVIPIIASIIFIFELEVKRPTAHVNITRDITLGFINKYKDLI*
Ga0115001_109603652	3300009785	Marine	MASIISILELEVKRPTAQVNITRDITLGFIKRYKDLIN
Ga0115012_114049731	3300009790	Marine	MFRHPAAPAPNATKNIPIRASEVLVFEFEVKNPTAQVNITRDITLGFINKYNDLIKVPKSNSEI
Ga0133547_121461114	3300010883	Marine	ASIIFIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0163108_100938401	3300012950	Seawater	SATKIIHIIALSMFMFALEVNSPTAHVNITRDITLGFINNNNDFI*
Ga0187220_11191921	3300017768	Seawater	TRVILIIASITFISELEVKKPTAQVKITRDMTLGFINKYKDLK
Ga0211563_11148991	3300020322	Marine	AAPAPNATKIIPIIASEIFIFELEVNNPTAQVNITRDITLGFMRDTKDLI
Ga0211502_10888872	3300020332	Marine	EPRATKIIHIIALSMFMFVLEVNSPTAHVNITRDITLGFINNNNDFI
Ga0211613_11181553	3300020353	Marine	KATKIIAIIASKVFRFGLEVKNPTAQVNMTRDITLGFINDINDFI
Ga0211682_103681851	3300020376	Marine	KSDSYHIFKHPAAPAPKATKAIPIIASVMLVFELEVKKPTAHVNITRDMTLGFISKYKDL
Ga0211596_100277081	3300020384	Marine	IPIIESTMLIGDPDVNNPTAHVKIASDITLGFISNQRLRI
Ga0211552_101849391	3300020412	Marine	ASEIFIFELEVNNPTAQVNITRDITLGFMSDTKDLI
Ga0211516_102811203	3300020413	Marine	AIPIIASNIFEFELEVKNPTAQVNITRDITLGFINKYKDFK
Ga0211536_104069591	3300020426	Marine	PNATKIIPVIASKILVFESDVKNPTAHVKITRDITLGFISCNKDLI
Ga0211714_105547273	3300020466	Marine	IIHIIALSMLMFALEVNSPTAHVNITRDITLGFINNNNDFI
Ga0206686_11268713	3300021065	Seawater	SRSDSYHIFKHPAAPAPNATKIIPIIASEIFIFELEVNNPTAQVNITRDITLGFMSDTKDLI
Ga0206680_101874583	3300021352	Seawater	KHPAAPEPKATKVMAIIASKVFRFGLEVKNPTAQVNTTRDITLGFISDINDLI
Ga0226832_104397961	3300021791	Hydrothermal Vent Fluids	APNATKIIPIIASVIFVFEFEVNNPTAHVNITRDITLGFINNINDFI
Ga0208062_1043125	3300025195	Deep Ocean	APAPKATKVIPIIASIIFVLEFEVNNPTAHVNITRDITLGFISNMKDFI
Ga0208569_10050894	3300025200	Deep Ocean	PIIASIIFVLEFEVNNPTAHVNITRDITLGFISNMKDFI
Ga0207963_10535894	3300026080	Marine	AAPAPNATKIIPIIASEIFIFEFEVNNPTAHVNITRDITLGFMSDTKDLI
Ga0208879_11974121	3300026253	Marine	KLPAAPAPNATKIIATIASNVFRFGLEVKNPTAQVNTTRDITLGFMSDINDLM
Ga0208408_11082351	3300026260	Marine	SYHIFKHPAAPDPKATKIIHIIALVMLVLELDVNSPTAHVNITRDITLGFINNNNDFM
Ga0208764_101068101	3300026321	Marine	HIFKHPAAPAPNATKIIPIIASEIFIFESEVNNPTAHVNITRDITLGFMSDTNDLI
Ga0209034_100226531	3300027755	Marine	SKVFRFGLEVKNPTAQVNMTRDITLGFINDINDFI
Ga0209711_100462571	3300027788	Marine	FRHPAAPAPKATKDIPIIASVMLVFEFDVNKPTAHVNMTRDITLGFISRYND
Ga0209501_107728151	3300027844	Marine	PAAPAPKATKVIPTMASVMLVFELEVKKPTAHVNITRDMTLGFISKYKDLI
Ga0209402_101003385	3300027847	Marine	TKVIPIIVLVIFVFEFEVNNPTAHVNITRDITLGFINNIKDFI
Ga0257107_11857401	3300028192	Marine	FKHPAAPAPNATKIIPIIASEIFIFELEVNNPTAHVNITRDITLGFMSDTKDLI
Ga0257109_10383374	3300028487	Marine	SIIFVFEFEVNNPTAQVNITRDITLGFISNIKDFI
Ga0257109_11596153	3300028487	Marine	ATKIIPIIASEIFIFELEVNNPTAQVNITRDITLGFMSDTKDLI
Ga0308149_10494901	3300031542	Marine	TKVIPIIASIIFIFELEVKRPTAHVNITRDITLGFINKYKDLI
Ga0315326_107904783	3300031775	Seawater	APAPNATKIIPIIASEIFIFEFEVNNPTAHVNITRDITLGFMSDTNDLI
Ga0310121_107464971	3300031801	Marine	YHMFKHPAAPAPKATKVIPIIALVIFVFEFEVNNPTAHVNITRDITLGFINNIKDFI
Ga0310123_102943834	3300031802	Marine	AAPAPKATKVIPIIASIIFVLEFEVNNPTAHVNITRDITLGFISNMKDFI
Ga0310123_109166592	3300031802	Marine	APKATKDIPIIASVILVLEFEVKKPTAHVNITSDITLGFMSKYKDLI
Ga0310120_102496601	3300031803	Marine	SYHIFKHPAAPAPKATKDIPIIASVILVLEFEVKKPTAHVNITSDITLGFMSKYKDLI
Ga0310124_102937074	3300031804	Marine	PTATKATPIIALVIFIFELEVKRPTAHVNITRDITLGFISKYKDLM
Ga0310125_101116001	3300031811	Marine	FKHPAAPAPIATKIIPIIASEIFIFELEVNNPTAQVNITRDITLGFMSDTKDLI
Ga0315318_105910383	3300031886	Seawater	IIASEIFIFELEVNNPTAHVNITRDITLGFMSNTKDLI
Ga0310344_104042324	3300032006	Seawater	HPAAPEPSATKIIPSIALIILIFEFDVSNPTAQVNMTRDITLGFISNIKDLI
Ga0310344_105068444	3300032006	Seawater	AAPAPIATKIIEIIASKVFIVGLEAKNPTAQVNITRDITLGFISDINDLI
Ga0310344_110950563	3300032006	Seawater	ASKIFVFEFEVNSPTAHVNITRDITLGFINNIKDFI
Ga0315316_110388651	3300032011	Seawater	IASVIFVFEFEVNNPTAHVNITRDITLGFISNIKDFI
Ga0315327_105388423	3300032032	Seawater	NATKIIHAIALNIFVFELDVNKPTAQVNITRDITLGFINSNRDFI
Ga0315321_101782961	3300032088	Seawater	FKHPAAPEPSATKIIHTIALTMFMFVLEVNNPTAHVNITRDITLGFINNNNDFI
Ga0310345_103730041	3300032278	Seawater	SVIFIFEFEVNNPTAHVNITRDITLGFISNIKDFI
Ga0315334_109231321	3300032360	Seawater	APIATNIIEIIASKVFRVGLEVNNPTVQVNITRDITLGFISEIRDLA
Ga0315334_118084582	3300032360	Seawater	PIIASEIFIFELEVNNPTAQVNITRDITLGFMSDTKDLI
Ga0372840_216127_425_568	3300034695	Seawater	APNATKIIPIIASEIFIFELEVNNPTAHVNITRDITLGFMSDTKDLI