Metagenome Family F080668

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080668
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	46 residues
Representative Sequence	TGVDERVMTINELFANPKLNYEVLRRLQAGQVSISISGEQAAKTGEF
Number of Associated Samples	89
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.39 %
% of genes from short scaffolds (< 2000 bps)	92.17 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.130 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.739 % of family members)
Environment Ontology (ENVO)	Unclassified (40.870 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.913 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.00% β-sheet: 0.00% Coil/Unstructured: 68.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00149	Metallophos	2.61
PF02272	DHHA1	2.61
PF02900	LigB	1.74
PF13442	Cytochrome_CBB3	1.74
PF01734	Patatin	1.74
PF13676	TIR_2	0.87
PF13091	PLDc_2	0.87
PF00196	GerE	0.87
PF13281	MAP3K_TRAF_bd	0.87
PF02653	BPD_transp_2	0.87
PF01447	Peptidase_M4	0.87
PF02868	Peptidase_M4_C	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.74
COG3227	Zn-dependent metalloprotease (Neutral protease B)	Posttranslational modification, protein turnover, chaperones [O]	1.74
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.74
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.13 %
All Organisms	root	All Organisms	40.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.13 %
cellular organisms	root	All Organisms → cellular organisms	40.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.13 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.13 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.13 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.96 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.09 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.13 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
Phreatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae	1.74 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.87 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.87 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.13 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
Phreatobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter	1.74 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.87 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.13 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
Phreatobacter oligotrophus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter oligotrophus	1.74 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.87 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.87 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	0.87 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.13 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
Phreatobacter oligotrophus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter oligotrophus	1.74 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.87 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.87 %
Bosea sp. AK1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AK1	0.87 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459023\|GZGNO2B02IHH1B	Not Available	505	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10031441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1431	Open in IMG/M
3300001976\|JGI24752J21851_1009988	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300005328\|Ga0070676_10982537	Not Available	633	Open in IMG/M
3300005332\|Ga0066388_105800585	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005364\|Ga0070673_100457182	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300005455\|Ga0070663_101108890	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300005458\|Ga0070681_10521966	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300005459\|Ga0068867_102288124	Not Available	513	Open in IMG/M
3300005467\|Ga0070706_101527486	Not Available	610	Open in IMG/M
3300005544\|Ga0070686_100318924	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300005713\|Ga0066905_100154782	Not Available	1657	Open in IMG/M
3300005764\|Ga0066903_101328568	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300005764\|Ga0066903_103955761	Not Available	795	Open in IMG/M
3300005764\|Ga0066903_104141227	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300005764\|Ga0066903_106546872	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005764\|Ga0066903_107225379	Not Available	575	Open in IMG/M
3300005764\|Ga0066903_108229509	Not Available	533	Open in IMG/M
3300006058\|Ga0075432_10462212	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300006162\|Ga0075030_101241700	Not Available	585	Open in IMG/M
3300009147\|Ga0114129_10042380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	6410	Open in IMG/M
3300009545\|Ga0105237_12572844	Not Available	519	Open in IMG/M
3300009792\|Ga0126374_10165536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1359	Open in IMG/M
3300010046\|Ga0126384_10167091	Not Available	1710	Open in IMG/M
3300010046\|Ga0126384_10382599	Not Available	1183	Open in IMG/M
3300010046\|Ga0126384_10587765	Not Available	973	Open in IMG/M
3300010048\|Ga0126373_12557796	Not Available	569	Open in IMG/M
3300010366\|Ga0126379_10663228	Not Available	1134	Open in IMG/M
3300010376\|Ga0126381_103635985	Not Available	604	Open in IMG/M
3300010398\|Ga0126383_10203685	Not Available	1902	Open in IMG/M
3300010398\|Ga0126383_11816553	Not Available	698	Open in IMG/M
3300010398\|Ga0126383_13238515	Not Available	532	Open in IMG/M
3300010399\|Ga0134127_11937031	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012350\|Ga0137372_10633261	Not Available	781	Open in IMG/M
3300012353\|Ga0137367_10868919	Not Available	623	Open in IMG/M
3300012896\|Ga0157303_10096974	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300012951\|Ga0164300_10838495	Not Available	574	Open in IMG/M
3300012971\|Ga0126369_10046720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	3674	Open in IMG/M
3300012971\|Ga0126369_12756996	Not Available	575	Open in IMG/M
3300015374\|Ga0132255_100102515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AK1	3891	Open in IMG/M
3300016294\|Ga0182041_10291688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1348	Open in IMG/M
3300016294\|Ga0182041_10621416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	951	Open in IMG/M
3300016294\|Ga0182041_11486364	Not Available	623	Open in IMG/M
3300016319\|Ga0182033_11186304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	684	Open in IMG/M
3300016319\|Ga0182033_11306701	Not Available	652	Open in IMG/M
3300016341\|Ga0182035_11152895	Not Available	691	Open in IMG/M
3300016341\|Ga0182035_11425552	Not Available	622	Open in IMG/M
3300016387\|Ga0182040_11645820	Not Available	547	Open in IMG/M
3300016422\|Ga0182039_10418379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1141	Open in IMG/M
3300016445\|Ga0182038_10411396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter oligotrophus	1136	Open in IMG/M
3300016445\|Ga0182038_10509533	All Organisms → cellular organisms → Bacteria → Proteobacteria	1027	Open in IMG/M
3300017943\|Ga0187819_10691550	Not Available	575	Open in IMG/M
3300017959\|Ga0187779_10340418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300017966\|Ga0187776_10227434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1184	Open in IMG/M
3300017973\|Ga0187780_10113990	Not Available	1865	Open in IMG/M
3300021420\|Ga0210394_11177484	Not Available	659	Open in IMG/M
3300021560\|Ga0126371_10119303	All Organisms → cellular organisms → Bacteria	2659	Open in IMG/M
3300023073\|Ga0247744_1081501	Not Available	562	Open in IMG/M
3300025912\|Ga0207707_10410420	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300025932\|Ga0207690_10697270	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300026054\|Ga0208659_1004761	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300026067\|Ga0207678_11006606	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300026089\|Ga0207648_11104200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	744	Open in IMG/M
3300026720\|Ga0207440_102993	Not Available	518	Open in IMG/M
3300026779\|Ga0207471_100837	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300026829\|Ga0207580_1001352	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300026853\|Ga0207443_1008595	Not Available	574	Open in IMG/M
3300027330\|Ga0207777_1098816	Not Available	503	Open in IMG/M
3300027371\|Ga0209418_1072410	Not Available	617	Open in IMG/M
3300027428\|Ga0207617_101076	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300027430\|Ga0207561_102797	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300027911\|Ga0209698_11316879	Not Available	528	Open in IMG/M
3300031231\|Ga0170824_123947209	Not Available	622	Open in IMG/M
3300031474\|Ga0170818_110411095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6182	Open in IMG/M
3300031573\|Ga0310915_11069266	Not Available	561	Open in IMG/M
3300031679\|Ga0318561_10565368	Not Available	626	Open in IMG/M
3300031681\|Ga0318572_10477340	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300031747\|Ga0318502_10186805	All Organisms → cellular organisms → Bacteria → Proteobacteria	1195	Open in IMG/M
3300031763\|Ga0318537_10023987	Not Available	2141	Open in IMG/M
3300031768\|Ga0318509_10793278	Not Available	524	Open in IMG/M
3300031771\|Ga0318546_10790960	Not Available	668	Open in IMG/M
3300031794\|Ga0318503_10064545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1132	Open in IMG/M
3300031821\|Ga0318567_10419492	Not Available	759	Open in IMG/M
3300031859\|Ga0318527_10105669	All Organisms → cellular organisms → Bacteria → Proteobacteria	1159	Open in IMG/M
3300031879\|Ga0306919_10119585	Not Available	1883	Open in IMG/M
3300031879\|Ga0306919_10884854	Not Available	685	Open in IMG/M
3300031879\|Ga0306919_11179864	Not Available	582	Open in IMG/M
3300031890\|Ga0306925_10840056	All Organisms → cellular organisms → Bacteria → Proteobacteria	950	Open in IMG/M
3300031910\|Ga0306923_12002530	Not Available	588	Open in IMG/M
3300031912\|Ga0306921_12049297	Not Available	608	Open in IMG/M
3300031942\|Ga0310916_10951781	Not Available	718	Open in IMG/M
3300031942\|Ga0310916_11188685	Not Available	631	Open in IMG/M
3300031946\|Ga0310910_10348227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter oligotrophus	1170	Open in IMG/M
3300031947\|Ga0310909_10116503	Not Available	2164	Open in IMG/M
3300031947\|Ga0310909_10496626	Not Available	1023	Open in IMG/M
3300031954\|Ga0306926_10758102	Not Available	1173	Open in IMG/M
3300031954\|Ga0306926_11100301	Not Available	940	Open in IMG/M
3300031962\|Ga0307479_10514599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1180	Open in IMG/M
3300032003\|Ga0310897_10003717	All Organisms → cellular organisms → Bacteria → Proteobacteria	4110	Open in IMG/M
3300032003\|Ga0310897_10149179	Not Available	981	Open in IMG/M
3300032025\|Ga0318507_10375988	Not Available	619	Open in IMG/M
3300032035\|Ga0310911_10069461	Not Available	1878	Open in IMG/M
3300032035\|Ga0310911_10552466	Not Available	668	Open in IMG/M
3300032060\|Ga0318505_10398676	Not Available	650	Open in IMG/M
3300032060\|Ga0318505_10473774	Not Available	591	Open in IMG/M
3300032076\|Ga0306924_10341210	All Organisms → cellular organisms → Bacteria → Proteobacteria	1718	Open in IMG/M
3300032076\|Ga0306924_11263066	Not Available	795	Open in IMG/M
3300032076\|Ga0306924_11558338	Not Available	698	Open in IMG/M
3300032091\|Ga0318577_10382413	Not Available	673	Open in IMG/M
3300032094\|Ga0318540_10137332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1167	Open in IMG/M
3300032094\|Ga0318540_10550779	Not Available	556	Open in IMG/M
3300032179\|Ga0310889_10234487	Not Available	863	Open in IMG/M
3300032261\|Ga0306920_102750161	Not Available	671	Open in IMG/M
3300033004\|Ga0335084_10197919	All Organisms → cellular organisms → Bacteria	2087	Open in IMG/M
3300033290\|Ga0318519_10939890	Not Available	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.57%
Host-Associated	Host-Associated	10.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.96%
Plants	Host-Associated → Plants	10.43%
Aquatic	Environmental → Aquatic	2.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.48%
Sediment	Environmental → Aquatic → Sediment	1.74%
Freshwater	Environmental → Aquatic → Freshwater	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.43%
Loam	Environmental → Terrestrial → Soil → Loam	12.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.48%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026054	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026720	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A2w-12 (SPAdes)	Environmental	Open in IMG/M
3300026779	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A2w-11 (SPAdes)	Environmental	Open in IMG/M
3300026829	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A3-11 (SPAdes)	Environmental	Open in IMG/M
3300026853	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5w-12 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027428	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027430	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1-10 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FA3_02644500	2170459023	Grass Soil	MTLNELFANPKLNVEITRRLEAGQESVSISGNDAAKTGEF
AF_2010_repII_A1DRAFT_100314411	3300000597	Forest Soil	MTINELFTNPKLNDDVMRRLQAGQTPISISGQQAAKTGEF*
JGI24752J21851_10099881	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	MTLIELFANPKLNAEITRQLAAGQRSVSISGEDAAKTGEF*
Ga0070676_109825371	3300005328	Miscanthus Rhizosphere	VGVDERIMTLNELFANPKLNLEITRRLEAGQKSVSISGEDAAKTGEF*
Ga0066388_1058005852	3300005332	Tropical Forest Soil	VGVDERIMTLIELFANPKLNSEITRRLAEGQRSVSISGEDAAKTGEF*
Ga0070673_1004571822	3300005364	Switchgrass Rhizosphere	TLNELFANPKLNSEITRQLAAGQRSVSISGEDAAKTGEF*
Ga0070663_1011088902	3300005455	Corn Rhizosphere	VVGVDGRVLTINELFANPKLNLEITRRLEGGQKSVSISSEDAAKTAQF*
Ga0070681_105219662	3300005458	Corn Rhizosphere	VGVDERVVTLNELFANPKLNLEITRRIEAGQKSVSISGEDAAKTGEF*
Ga0068867_1022881242	3300005459	Miscanthus Rhizosphere	HALMRAVGVDERVVTLNELFANPKLNLEITRRIEAGQKSVSISGEDAAKTGEF*
Ga0070706_1015274862	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ERVVTLNELFANPKLNLEITRRIEAGQKLVSISGEDAAKTGEF*
Ga0070686_1003189241	3300005544	Switchgrass Rhizosphere	LGFHALMRAVGVDERIMTLNELFANPKLNSEITRQLAAGQRSVSISGEDAAKTGEF*
Ga0066905_1001547821	3300005713	Tropical Forest Soil	IGVDERILTLNELFANPKLNLEITQQLKAGQKPISISGKDAAKTGEF*
Ga0066903_1013285683	3300005764	Tropical Forest Soil	KVMTINELFVNPKLNDDVTRRLQASQAPISISGEQAAKTGEF*
Ga0066903_1039557612	3300005764	Tropical Forest Soil	ALMRLIGVDERVMTMNELFANPELNAKVVRRLNSGEKTISMSGEQAAMTGEF*
Ga0066903_1041412271	3300005764	Tropical Forest Soil	HTLMRWTGVDERVMTLNELFANPKLNVEVMRRLGAGQASISISGEEAVRTAEF*
Ga0066903_1065468722	3300005764	Tropical Forest Soil	GVDERIMTLIELFANPKLNSEITRRLAEGQRSVSISGEDAAKTGEF*
Ga0066903_1072253791	3300005764	Tropical Forest Soil	ERVMTINELFANPKLNDEVLRRLQAGQASISISAEQAAKTGEF*
Ga0066903_1082295091	3300005764	Tropical Forest Soil	ELFVNPKLNDEVMRRLQAGQTPISISGEQAANTGEF*
Ga0075432_104622122	3300006058	Populus Rhizosphere	VMTLIELFANPKLNAEITRQLAAGQRSVSISGEDAAKTGEF*
Ga0075030_1012417001	3300006162	Watersheds	MTINELFANPKLNDEVMRRLQAGQASISISGEHAAKTGEF*
Ga0114129_100423801	3300009147	Populus Rhizosphere	TLNELFANPKLNLEITQQLKAGQKPISISGKDAVKTAEF*
Ga0105237_125728442	3300009545	Corn Rhizosphere	RAVGVDERIMTLNELFANPKLNSEITRQLAAGQRSVSISGEDAAKTGEF*
Ga0126374_101655363	3300009792	Tropical Forest Soil	WTGVDERVMTINELFVNPKLNDEVIRRLQAGQTAISISGEQAAKTGEF*
Ga0126384_101670913	3300010046	Tropical Forest Soil	GFHTLMRWTGVDERIMTINELFVNPKLNDEVMRRLQAGQTPISISGEQAANTGEF*
Ga0126384_103825991	3300010046	Tropical Forest Soil	VDERIMTLNELFANPKLNLEIARRLEAGQKSVSISGEDAANTGEF*
Ga0126384_105877654	3300010046	Tropical Forest Soil	VDERIMTLNELFANPKLNLEIARRLEAGQKSVSISGEDAAKTGEF*
Ga0126373_125577961	3300010048	Tropical Forest Soil	ALMRWTGVDERVMTINELFVNPKLNDEVMSRLQAGQASISISGEQAAKTGEF*
Ga0126379_106632281	3300010366	Tropical Forest Soil	LMRGAGVDERIMTLNELFANPKLNLEIARRLEAGQKSVSISGEDAAKTGEF*
Ga0126381_1036359852	3300010376	Tropical Forest Soil	GVDERILTLNELFANPKLNLEITQQLKAGQKPISISGKDAAKTGEF*
Ga0126383_102036851	3300010398	Tropical Forest Soil	LMRWTGVDEKVMTINELFANPKLNDDVMRRLQAGQTPVSISGQQAAKTGEF*
Ga0126383_118165532	3300010398	Tropical Forest Soil	LMQQIGVDERILTLNELFANPKLNLEITQQLKAGQKPISISGKDAAKTGEF*
Ga0126383_132385151	3300010398	Tropical Forest Soil	QQIGVDERILTLNELFANPKLNLEITQQLKAGQKPISISGKDAAKTGEF*
Ga0134127_119370312	3300010399	Terrestrial Soil	ERIMTLNELFANPKLNSEITRQLAAGQRSVSISGEDAAKTGEF*
Ga0137372_106332611	3300012350	Vadose Zone Soil	NELFANPELNVEVMRRLGAGQASISISGEEAVRTAEF*
Ga0137367_108689192	3300012353	Vadose Zone Soil	MGVDERVMTLNELFANPELNVEVMRRLGAGQASISISGEEAVRTAEF*
Ga0157303_100969742	3300012896	Soil	VGVDERVMTLIELFANPKLNAEITRQLAAGQRSVSISGEDAAKTGEF*
Ga0164300_108384952	3300012951	Soil	MRAVGVDERIMTLNELFANPKLNSEITRQLAAGQRSVSISGEDAAKTGEF*
Ga0126369_100467201	3300012971	Tropical Forest Soil	VDERIMTLNELFANPKLNVEITNRLNAGQKLVSISGEDAAKTGEF*
Ga0126369_127569961	3300012971	Tropical Forest Soil	GVDERIMTINELFVNPKLNDEVMRRLQAGQTPISISGEQAANTGEF*
Ga0132255_1001025151	3300015374	Arabidopsis Rhizosphere	FHALMRAVGVDERIMTLNELFANPKLNVEITRRLEAGQRSVAISGEDAAKTAEF*
Ga0182041_102916881	3300016294	Soil	IMTLNELFANPKLNLEITRRLQAGQKSISVSGEEAGKTGEF
Ga0182041_106214161	3300016294	Soil	LMRWMGVDERVMTINELFVNPKLNDEVIRRLQAGQAAISISGEQAAKTGEF
Ga0182041_114863642	3300016294	Soil	RWTGVDERIMTINELFVNPKLNDEVMRRLQAGQTPVSISGEQAAKTGEF
Ga0182033_111863041	3300016319	Soil	NELFANPKLNLEITRRLEAGQKSVSISGEDAAKTGEF
Ga0182033_113067011	3300016319	Soil	TGVDERVMTINELFANPKLNYEVLRRLQAGQVSISISGEQAAKTGEF
Ga0182035_111528952	3300016341	Soil	ERIMTLNELFANPKLNLEITRRLQAGQKSISVSGEEAGKTGEF
Ga0182035_114255521	3300016341	Soil	LFVNPKLNDEVMRRLQAGQASISISGEQAAKTGEF
Ga0182040_116458201	3300016387	Soil	ELFVNPKLNDEVMRRLQAGQTPISISGEQAAKTGEF
Ga0182039_104183793	3300016422	Soil	NEKVMTINELFANPKLNDDAMRRLQAGQKAISISGEQAAKTGEF
Ga0182038_104113961	3300016445	Soil	VDERVMTLNELFANPKLNAEVMRRLGAGQASISISGEEAVRTAEF
Ga0182038_105095332	3300016445	Soil	RPGFHALMRWMGVDERVMTINELFVNPKLNDEVIRRLQAGQTAISISGEQAAKTGEF
Ga0187819_106915501	3300017943	Freshwater Sediment	MTINELFANPKLNDDVMRRLQAGQTPISISGEQAAKTGEF
Ga0187779_103404182	3300017959	Tropical Peatland	MRWTGVDERVATINELFANPRLNDEVKRRLGAGQASVAISAAEAARTAEF
Ga0187776_102274342	3300017966	Tropical Peatland	MRWTGVDEKVMTINELFVNPKLNDEVLHRLQAGQASISISGEQAATTGEF
Ga0187780_101139903	3300017973	Tropical Peatland	WTGVDEKVMTVNELFANPKLNDEVLHRLQAGQASITISGEQAAKTGEF
Ga0210394_111774841	3300021420	Soil	ELFANPKLNDDVMRRLQAGQTPISISGEQAAKTGEF
Ga0126371_101193035	3300021560	Tropical Forest Soil	WTGVDEKVMTINELFVNPKLNDDVTRRLQAGQASISISGEQAAKTGEF
Ga0247744_10815012	3300023073	Soil	ERMMTLNELFANPKLNSEITRQLAAGQRSVSISGEDAAKTGEF
Ga0207707_104104201	3300025912	Corn Rhizosphere	VGVDERVVTLNELFANPKLNLEITRRIEAGQKSVSISGEDAAKTGEF
Ga0207690_106972702	3300025932	Corn Rhizosphere	VGVDERIMTLNELFANPKLNLEITRRLEAGQKSVSISGEDAAKTGEF
Ga0208659_10047612	3300026054	Natural And Restored Wetlands	ERVLTLNELFANPKLNLEITRRLEAGQKSVSISGEDAAKTGEF
Ga0207678_110066061	3300026067	Corn Rhizosphere	VVGVDGRVLTINELFANPKLNLEITRRLEGGQKSVSISSEDAAKTAQF
Ga0207648_111042002	3300026089	Miscanthus Rhizosphere	PGIHALLRWTGVDERVLTLNELFANPKLNVEVARRLKDGQASISISGEAAAKTGEF
Ga0207440_1029932	3300026720	Soil	RLGFHALMQAVGVDERVMTLIELFANPKLNAEITRQLAAGQRSVSISGEDAAKTGEF
Ga0207471_1008372	3300026779	Soil	FHALMQAVGVDERVMTLIELFANPKLNAEITRQLAAGQRSVSISGEDAAKTGEF
Ga0207580_10013521	3300026829	Soil	LIELFANPKLNAEITRQLAAGQRSVSISGEDAAKTGEF
Ga0207443_10085951	3300026853	Soil	LGFHALMQAVGVDERVMTLIELFANPKLNAEITRQLAAGQRSVSISGEDAAKTGEF
Ga0207777_10988162	3300027330	Tropical Forest Soil	FNNRAGFHTLMRWTGVDEKVMTINELFANPKLNDDVMRRLQAGQTPISISGEQAAKTGQF
Ga0209418_10724102	3300027371	Forest Soil	GFHALMRWTGVDERVMTINELFANPKLNDEVLRRLQSGQASISISAEQAAKTGEF
Ga0207617_1010761	3300027428	Soil	DERVMTLIELFANPKLNAEITRQLAAGQRSVSISGEDAAKTGEF
Ga0207561_1027971	3300027430	Soil	MQAVGVDERVMTLIELFANPKLNAEITRQLAAGQRSVSISGEDAAKTGEF
Ga0209698_113168792	3300027911	Watersheds	RWTGVDERVMTINELFANPKLNDEVMRRLQAGQASISISGEHAAKTGEF
Ga0170824_1239472092	3300031231	Forest Soil	DERVMTINELFVNPKLNDEVMRQLQAGQASISISGEQAAKTGEF
Ga0170818_1104110956	3300031474	Forest Soil	GVDERVMTLNELFANPKLNVEITRRLEAGQESVSISGNDAAKTGEF
Ga0310915_110692662	3300031573	Soil	ELFVNPKLNDEVMRRLQAGQTPVSISGEQAAKTGQF
Ga0318561_105653681	3300031679	Soil	FHTLMRWTGVDEKVMTINELFANPKLNDDVMRRLQAGQTPISISGQQAAKTGEF
Ga0318572_104773401	3300031681	Soil	HALMRGVGVDERIMTLNELFANPKLNIEITRRLEAGQKSVSISGEDAAKTGEF
Ga0318502_101868051	3300031747	Soil	GVGVDERIMTLNELFANPKLNIEITRRLEAGQKSVSISGEDAAKTGEF
Ga0318537_100239871	3300031763	Soil	LFVNPKLNDEVMRRLQAGQTSISISGEQAANTGEF
Ga0318509_107932782	3300031768	Soil	MTINELFVNPKLNDEVIRRLQAGQTAISISGEQAAKTGEF
Ga0318546_107909602	3300031771	Soil	IGVDEKVITINELFANPKLNGEIVRRLQTGHESISISGQDAAITGEF
Ga0318503_100645453	3300031794	Soil	ELFANPKLNDEVMRRLQAGQTSISISGEQAANTGEF
Ga0318567_104194921	3300031821	Soil	LMRWTGVDEKVMTINELFANPKLNDDVMRRLQAGQTPISISGQQAAKTGEF
Ga0318527_101056692	3300031859	Soil	RIMTLNELFANPKLNIEITRRLEAGQKSVSISGEDAAKTGEF
Ga0306919_101195853	3300031879	Soil	TINELFANPKLNDEVMRRLQAGQTSISISGEQAANTGEF
Ga0306919_108848542	3300031879	Soil	LFANPKLNDDLMRRLQAGQTPISISGEQAAKTGEF
Ga0306919_111798641	3300031879	Soil	ELFANPKLNDDAMRRLQAGQKAISISGEQAAKTGEF
Ga0306925_108400562	3300031890	Soil	GYFNNRAGFHTLMRWTGVDEKVMTINELFANPKLNDDLMRRLQAGQTPISISGEQAAKTGEF
Ga0306923_120025301	3300031910	Soil	INELFANPKLNDDVMRRLQAGQIPISISGEQAAKTGEF
Ga0306921_120492971	3300031912	Soil	PGFHALMRWMGVDERVMTINELFANPKLNDEVLRRLQAGQVSISISGEQAAKTGEF
Ga0310916_109517812	3300031942	Soil	RWTGVNEKVMTINELFANPKLNDDAMRRLQAGQKAISISGEQAAKTGEF
Ga0310916_111886852	3300031942	Soil	NRAGFHTLMRWTGVDERIMTINELFVNPKLNDEVMRRLQAGQTPISISGEQAANTGEF
Ga0310910_103482271	3300031946	Soil	ELFANPKLNAEVMRRLGAGQASISISGEEAVRTAEF
Ga0310909_101165033	3300031947	Soil	LFVNPKLNDEVMRRLQAGQTPVSISGEQAAKTGEF
Ga0310909_104966261	3300031947	Soil	LNELFANPKLNLEITRRLQAGQKSISVSGEEAGKTGEF
Ga0306926_107581021	3300031954	Soil	EKVMTINELFANPKLNDDLMRRLQAGQTPISISGEQAAKTGEF
Ga0306926_111003011	3300031954	Soil	NRAGFHTLMRWTGVDEKVMTINELFANPKLNDDVMRRLQAGQTPISISGEQAAKTGEF
Ga0307479_105145991	3300031962	Hardwood Forest Soil	NELFANPKLNDDVMRRLQAGQTPISISGEQAAKTGEF
Ga0310897_100037175	3300032003	Soil	TLNELFANPKLNLEITRRIEAGQKSVSISGEDAAKTGEF
Ga0310897_101491791	3300032003	Soil	GVDERVMTLNELFANPELNVEVMRRLGAGQASISISGEEAVKTAEF
Ga0318507_103759882	3300032025	Soil	HTLMRWTGVDEKVMTINELFANPKLNDDVMRRLQAGQTPISISGEQAAKTGQF
Ga0310911_100694613	3300032035	Soil	YFNNRAGFHTLMRWTGVDEKVMTINELFANPKLNDDVMRRLQAGQTPISISGQQAAKTGE
Ga0310911_105524661	3300032035	Soil	RPGFHALMRWTGVDEKVMTINELFANPKLNDEVLHRLQAGQASISISGEQAAQTGEF
Ga0318505_103986761	3300032060	Soil	MRWTGVDEKVMTINELFANPKLNDDVMRRLQAGQTPISISGQQAAKTGEF
Ga0318505_104737741	3300032060	Soil	WTGVDEKVMTINELFANPKLNDDVMRRLQAGQTPISISGEQAAKTGQF
Ga0306924_103412102	3300032076	Soil	ELFVNPKLNDEVIRRLQAGQAAISISGEQAAKTGEF
Ga0306924_112630663	3300032076	Soil	GVDDRIMTINELFVNPKLNDEVMRRLQAGQTPVSISGEQAAKTGEF
Ga0306924_115583381	3300032076	Soil	PGFHALMRWMGVDERVMTINELFVNPKLNDEVMRRLQAGQASISISGEQAAKTGEF
Ga0318577_103824131	3300032091	Soil	EKVMTIIVLFANPKLIDVVMRRLQAGQTPISISGEQAAKTGQF
Ga0318540_101373321	3300032094	Soil	WTGVDEKVMTINELFANPKLNDDVMRRLQAGQTPISISGQQAAKTGEF
Ga0318540_105507791	3300032094	Soil	PGFHNLMRLIGVDEKVITINELFANPKLNGEIVRRLQTGHESISISGQDAAITGEF
Ga0310889_102344872	3300032179	Soil	ELFANPKLNVEVMRRLGAGQASISISGEEAVRTAEF
Ga0306920_1027501611	3300032261	Soil	TLMRWTGVDEKVMTINELFANPKLNDDLMRRLQAGQTPISISGEQAAKTGEF
Ga0335084_101979191	3300033004	Soil	TLNELFANPKLNIEITRRLEAGQKSVSISGEDAARTGEF
Ga0318519_109398901	3300033290	Soil	FHNLMRLIGVDEKVITINELFANPKLNGEIVRRLQTGHESISISGQDAAITGEF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080668

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences