Metagenome / Metatranscriptome Family F078103

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078103
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	54 residues
Representative Sequence	MSLALIAVIVLSLAAGVGLGYAIIFGILYIFDRSRQSIKVAPAQVLTTSAGND
Number of Associated Samples	72
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.34 %
% of genes near scaffold ends (potentially truncated)	18.10 %
% of genes from short scaffolds (< 2000 bps)	58.62 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.966 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (18.103 % of family members)
Environment Ontology (ENVO)	Unclassified (56.034 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (33.621 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.91% β-sheet: 0.00% Coil/Unstructured: 53.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00005	ABC_tran	6.03
PF00072	Response_reg	2.59
PF00196	GerE	2.59
PF05258	DciA	2.59
PF13735	tRNA_NucTran2_2	2.59
PF00697	PRAI	1.72
PF13193	AMP-binding_C	1.72
PF00085	Thioredoxin	1.72
PF00814	TsaD	0.86
PF05229	SCPU	0.86
PF01663	Phosphodiest	0.86
PF00465	Fe-ADH	0.86
PF02686	Glu-tRNAGln	0.86
PF08659	KR	0.86
PF01590	GAF	0.86
PF03992	ABM	0.86
PF04368	DUF507	0.86
PF01743	PolyA_pol	0.86
PF13432	TPR_16	0.86
PF12627	PolyA_pol_RNAbd	0.86
PF11146	DUF2905	0.86
PF03976	PPK2	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG5512	Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives)	General function prediction only [R]	2.59
COG0135	Phosphoribosylanthranilate isomerase	Amino acid transport and metabolism [E]	1.72
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	0.86
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	0.86
COG0533	tRNA A37 threonylcarbamoyltransferase TsaD	Translation, ribosomal structure and biogenesis [J]	0.86
COG0617	tRNA nucleotidyltransferase/poly(A) polymerase	Translation, ribosomal structure and biogenesis [J]	0.86
COG0721	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	Translation, ribosomal structure and biogenesis [J]	0.86
COG1214	tRNA A37 threonylcarbamoyladenosine modification protein TsaB	Translation, ribosomal structure and biogenesis [J]	0.86
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	0.86
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	0.86
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.86
COG5430	Fimbrial subunit ScuA/B, ScuA/B/SCPU domain	Extracellular structures [W]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	56.90 %
Unclassified	root	N/A	31.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	28.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.45 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	22.41 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.45 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22.41 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.45 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	9.48 %
Cronobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Cronobacter	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.45 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8.62 %
Cronobacter sakazakii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Cronobacter → Cronobacter sakazakii	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.45 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8.62 %
Cronobacter sakazakii 701	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Cronobacter → Cronobacter sakazakii → Cronobacter sakazakii 701	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004628\|Ga0070399_1012305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5302	Open in IMG/M
3300005836\|Ga0074470_11315670	All Organisms → cellular organisms → Bacteria	2334	Open in IMG/M
3300009635\|Ga0116117_1100017	Not Available	726	Open in IMG/M
3300009649\|Ga0105855_1235212	Not Available	561	Open in IMG/M
3300009662\|Ga0105856_1168294	Not Available	676	Open in IMG/M
3300009665\|Ga0116135_1041853	Not Available	1582	Open in IMG/M
3300010339\|Ga0074046_10267703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1057	Open in IMG/M
3300010343\|Ga0074044_10302596	Not Available	1052	Open in IMG/M
3300012206\|Ga0137380_10805265	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300012350\|Ga0137372_10214008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1534	Open in IMG/M
3300012353\|Ga0137367_10618200	Not Available	758	Open in IMG/M
3300012355\|Ga0137369_10327288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1127	Open in IMG/M
3300012358\|Ga0137368_10128967	All Organisms → cellular organisms → Bacteria	1902	Open in IMG/M
3300012360\|Ga0137375_10235920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1701	Open in IMG/M
3300014160\|Ga0181517_10001303	All Organisms → cellular organisms → Bacteria → Acidobacteria	28245	Open in IMG/M
3300014160\|Ga0181517_10013700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6018	Open in IMG/M
3300014161\|Ga0181529_10001396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	31115	Open in IMG/M
3300014161\|Ga0181529_10066013	All Organisms → cellular organisms → Bacteria	2444	Open in IMG/M
3300014167\|Ga0181528_10000038	All Organisms → cellular organisms → Bacteria → Acidobacteria	132585	Open in IMG/M
3300014167\|Ga0181528_10000124	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	71521	Open in IMG/M
3300014167\|Ga0181528_10000278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	42267	Open in IMG/M
3300014167\|Ga0181528_10187547	Not Available	1117	Open in IMG/M
3300014168\|Ga0181534_10149134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300014168\|Ga0181534_10438739	Not Available	729	Open in IMG/M
3300014169\|Ga0181531_10089687	Not Available	1829	Open in IMG/M
3300014199\|Ga0181535_10422136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300014200\|Ga0181526_10977723	Not Available	532	Open in IMG/M
3300014491\|Ga0182014_10055656	All Organisms → cellular organisms → Bacteria	2675	Open in IMG/M
3300014491\|Ga0182014_10493731	Not Available	600	Open in IMG/M
3300014492\|Ga0182013_10250096	Not Available	1026	Open in IMG/M
3300014493\|Ga0182016_10001531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	28137	Open in IMG/M
3300014493\|Ga0182016_10014705	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7316	Open in IMG/M
3300014493\|Ga0182016_10052171	All Organisms → cellular organisms → Bacteria	3177	Open in IMG/M
3300014493\|Ga0182016_10697262	Not Available	570	Open in IMG/M
3300014502\|Ga0182021_11783940	Not Available	741	Open in IMG/M
3300014655\|Ga0181516_10006610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6918	Open in IMG/M
3300014655\|Ga0181516_10080018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1647	Open in IMG/M
3300014657\|Ga0181522_10429852	Not Available	791	Open in IMG/M
3300014838\|Ga0182030_10000072	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	141405	Open in IMG/M
3300014838\|Ga0182030_10003378	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	34082	Open in IMG/M
3300014838\|Ga0182030_10232828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2137	Open in IMG/M
3300014838\|Ga0182030_10309954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1729	Open in IMG/M
3300014838\|Ga0182030_10316628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1702	Open in IMG/M
3300016728\|Ga0181500_1072970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1410	Open in IMG/M
3300017948\|Ga0187847_10285409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300017988\|Ga0181520_10000079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	183149	Open in IMG/M
3300017988\|Ga0181520_10000216	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	122863	Open in IMG/M
3300017988\|Ga0181520_10014273	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9868	Open in IMG/M
3300017988\|Ga0181520_10167641	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300017988\|Ga0181520_10495278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300018034\|Ga0187863_10444159	Not Available	724	Open in IMG/M
3300018042\|Ga0187871_10038790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2930	Open in IMG/M
3300018042\|Ga0187871_10625015	Not Available	598	Open in IMG/M
3300018043\|Ga0187887_10370140	Not Available	846	Open in IMG/M
3300018043\|Ga0187887_10703745	Not Available	597	Open in IMG/M
3300018062\|Ga0187784_10705092	Not Available	807	Open in IMG/M
3300019082\|Ga0187852_1240730	Not Available	735	Open in IMG/M
3300019256\|Ga0181508_1347342	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300019256\|Ga0181508_1420063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1125	Open in IMG/M
3300019270\|Ga0181512_1020808	Not Available	538	Open in IMG/M
3300019787\|Ga0182031_1164331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1781	Open in IMG/M
3300022863\|Ga0224532_1000323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4273	Open in IMG/M
3300022877\|Ga0224527_1003167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6404	Open in IMG/M
3300023247\|Ga0224529_1047033	Not Available	766	Open in IMG/M
(restricted) 3300028024\|Ga0255336_100327	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	87598	Open in IMG/M
3300028082\|Ga0255352_1041706	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300028084\|Ga0255356_1015591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2234	Open in IMG/M
3300028084\|Ga0255356_1048084	Not Available	751	Open in IMG/M
3300028326\|Ga0268263_1000766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	38424	Open in IMG/M
3300028745\|Ga0302267_10246102	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300028748\|Ga0302156_10084095	Not Available	1641	Open in IMG/M
3300028762\|Ga0302202_10335801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300028783\|Ga0302279_10230763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300029913\|Ga0311362_11119422	Not Available	598	Open in IMG/M
3300029916\|Ga0302148_1064704	Not Available	1043	Open in IMG/M
3300029922\|Ga0311363_10159168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2869	Open in IMG/M
3300029952\|Ga0311346_10514266	Not Available	1107	Open in IMG/M
3300029953\|Ga0311343_10876832	Not Available	721	Open in IMG/M
3300030518\|Ga0302275_10013597	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7156	Open in IMG/M
3300030518\|Ga0302275_10398046	Not Available	720	Open in IMG/M
3300030688\|Ga0311345_10122412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Cronobacter → Cronobacter sakazakii → Cronobacter sakazakii 701	2877	Open in IMG/M
3300030688\|Ga0311345_10331853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1413	Open in IMG/M
3300031524\|Ga0302320_10015748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15504	Open in IMG/M
3300031524\|Ga0302320_10225665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2626	Open in IMG/M
3300031524\|Ga0302320_11672749	Not Available	615	Open in IMG/M
3300031524\|Ga0302320_12161959	Not Available	516	Open in IMG/M
3300031813\|Ga0316217_10001865	All Organisms → cellular organisms → Bacteria → Acidobacteria	26464	Open in IMG/M
3300031813\|Ga0316217_10019860	All Organisms → cellular organisms → Bacteria	4770	Open in IMG/M
3300031813\|Ga0316217_10061458	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300031884\|Ga0316220_1005346	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9184	Open in IMG/M
3300032117\|Ga0316218_1024434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2910	Open in IMG/M
3300032722\|Ga0316231_1160797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300033402\|Ga0326728_10011722	All Organisms → cellular organisms → Bacteria → Acidobacteria	19850	Open in IMG/M
3300033402\|Ga0326728_10015736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15641	Open in IMG/M
3300033402\|Ga0326728_10027659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9901	Open in IMG/M
3300033402\|Ga0326728_10050928	All Organisms → cellular organisms → Bacteria	6046	Open in IMG/M
3300033402\|Ga0326728_10366604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1256	Open in IMG/M
3300033405\|Ga0326727_10023131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	11905	Open in IMG/M
3300033405\|Ga0326727_10039394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7926	Open in IMG/M
3300033755\|Ga0371489_0254353	Not Available	873	Open in IMG/M
3300033888\|Ga0334792_004607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6433	Open in IMG/M
3300033983\|Ga0371488_0114313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1471	Open in IMG/M
3300034124\|Ga0370483_0000290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14449	Open in IMG/M
3300034130\|Ga0370494_058352	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300034130\|Ga0370494_079283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300034130\|Ga0370494_157592	Not Available	583	Open in IMG/M
3300034163\|Ga0370515_0000004	All Organisms → cellular organisms → Bacteria → Acidobacteria	56570	Open in IMG/M
3300034163\|Ga0370515_0041799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2044	Open in IMG/M
3300034163\|Ga0370515_0108398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1197	Open in IMG/M
3300034163\|Ga0370515_0266103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300034199\|Ga0370514_002261	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4256	Open in IMG/M
3300034199\|Ga0370514_034494	Not Available	1258	Open in IMG/M
3300034199\|Ga0370514_035561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300034282\|Ga0370492_0026042	Not Available	2404	Open in IMG/M
3300034282\|Ga0370492_0031081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2195	Open in IMG/M
3300034282\|Ga0370492_0276774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.28%
Engineered	Engineered	1.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.93%
Aquatic	Environmental → Aquatic	35.34%
Bioreactor	Engineered → Bioreactor	1.72%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	34.48%
Soil	Environmental → Terrestrial → Soil	34.48%
Peat	Environmental → Terrestrial → Peat	28.45%
Anaerobic	Engineered → Bioreactor → Anaerobic	1.72%
Sediment	Environmental → Aquatic → Sediment	0.86%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	29.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	28.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	28.45%
Lentic	Environmental → Aquatic → Freshwater → Lentic	5.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.17%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Sand	Environmental → Terrestrial → Soil → Sand	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	28.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	27.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	13.79%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	5.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.72%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	18.10%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	13.79%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	12.07%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	11.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.48%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	7.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	6.03%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	5.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.72%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.72%
Bioreactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Bioreactor	1.72%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.86%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.86%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.86%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004628	Microbial communities from bioreactor (seeded with sewage sludge) at LBNL, California, USA - Biofuel metagenome 4 (version 1)	Engineered	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022863	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 1-5	Environmental	Open in IMG/M
3300022877	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T0	Environmental	Open in IMG/M
3300023247	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T50	Environmental	Open in IMG/M
3300028024 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T3_179	Environmental	Open in IMG/M
3300028082	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T0	Environmental	Open in IMG/M
3300028084	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T100	Environmental	Open in IMG/M
3300028326	Microbial communities from bioreactor (seeded with sewage sludge) at LBNL, California, USA - Biofuel metagenome 5 (SPAdes)	Engineered	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M
3300032722	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070399_10123057	3300004628	Bioreactor	MKVEGIKVLSLVMSIAMVAVIVLSLAGGVGLGYAIIFGILNAFDRSRQLIKAAPTQVLTNSASSR*
Ga0074470_113156703	3300005836	Sediment (Intertidal)	LLSVLMFFALLAVIVLSLALGVGLGYAIIFGMLHLFDRSRRAVKIAPAPALHGSASGD*
Ga0116117_11000171	3300009635	Peatland	MSLVLFSVIALSLAAGIGLGYAIIFGILNAFDRSRQAIQAAPAQVLNTSAGGD*
Ga0105855_12352121	3300009649	Permafrost Soil	MSFALVAVIALSLTAGVGLGYVIIFGILDAFDRSRHLIKAPPAQILTNSAGSD*
Ga0105856_11682942	3300009662	Permafrost Soil	MSFALGAVIALSLTAGVGLGYVIIFGILDAFDRSRHLIKAPPAQILTNSAGSD*
Ga0116135_10418531	3300009665	Peatland	MSLAMVAVIVLSLAAGVGLGYAIIFGILDVFDRSRHMIKPAPAQILNTSAGND*
Ga0074046_102677032	3300010339	Bog Forest Soil	MSLALIAVIVLSLAAGVGLGYAIIFGILYVFDRSRQSIQVSPAQVLNGNAGSD*
Ga0074044_103025962	3300010343	Bog Forest Soil	MMSLAMFAVIVLSLAAGVGLGYAIIFGILYAFDRSRQSVQRVPAQVFNTSASSH*
Ga0137380_108052652	3300012206	Vadose Zone Soil	MSLVMFAVIILSLAAGVGLGYAIIFGILNLFDRSRQMIKTAPAQILTTSSGND*
Ga0137372_102140082	3300012350	Vadose Zone Soil	MSLAMLAVIVLSLAAGVGLGYAIIFGILHAFDRSRQAMRPAPVPVSMLNASSSAP*
Ga0137367_106182001	3300012353	Vadose Zone Soil	MSLAMLAVIVLSLAAGVGLGYAIIFGILHAFDRSRQAMRPAPVPVSLLNASSSAN*
Ga0137369_103272882	3300012355	Vadose Zone Soil	MSLAVLAVIVLSLAAGVGLGYVIIFGILHAFDRSRQAMRPAPVPVSILNASSSAN*
Ga0137368_101289672	3300012358	Vadose Zone Soil	MSLAMLAVIVLSLAAGVGLGYVIIFGILHAFDRSRQAMRPAPVPVSILNASSSAN*
Ga0137375_102359202	3300012360	Vadose Zone Soil	MSLAMLAVILLSLAAGVGLGYVIIFGILHAFDRSRQAMRPAPVPVSMLNASSSAN*
Ga0181517_100013032	3300014160	Bog	MSLAMFAVIALSLAAGVGLGYATIFGILRLFDLSRQSIKTTPARLLDTSTGSN*
Ga0181517_100137005	3300014160	Bog	LLALSAVIVLSLAAGVGLGYAVILGILYVFDRSRQAIKAAPARVLDTSTGGD*
Ga0181529_1000139616	3300014161	Bog	MSLVLCAVIALSLAAGIGLGYAIIFGILNAFDRSRQAIQAAPAQVLNTSAGGN*
Ga0181529_100660132	3300014161	Bog	MSVALISVVVLSLAAGVGLGYAIIFGILYAFDRSRQFVKAAPVQVLSSPAGHD*
Ga0181528_1000003863	3300014167	Bog	MSLAMIAVVVLSLAAGVGLGYAIIFGILDLFDRSRHTIKAPAQVLTTSSGND*
Ga0181528_1000012426	3300014167	Bog	MSLALVAVIILSLAAGVGLGYAIIFGILDLFDRSRHIIKAAPAQVLTTPAGSD*
Ga0181528_1000027815	3300014167	Bog	MSLALIAVIVLSLAAGVGLGYAIIFGILYIFDRSRQSIKVAPAQVLTTSAGND*
Ga0181528_101875472	3300014167	Bog	MPSIIPAGTIVLSLAMSFALIAVIVFSLAAGVGLGYAIIFGILYVFDRSRSSFQPRPARALNTTAGND*
Ga0181534_101491342	3300014168	Bog	VGLGYAIIFGILDLFDRSRHIIKAAPAQVLTTPAGSD*
Ga0181534_104387392	3300014168	Bog	MMSLAMFAVILLSLAAGVGMGYAITFGILYAFDRSRQSSHGVTPQVLHTSAGSD*
Ga0181531_100896872	3300014169	Bog	MSLAMIAVIVLSLAAGVGLGYAIIFGILDVFDRSRPRIKPAPAQILTTSSGND*
Ga0181535_104221362	3300014199	Bog	AMSLALIAVIVLSLAAGVGLGYAIIFGILHAFDRSRQLVQAAPAQVLNTSAGSN*
Ga0181526_109777231	3300014200	Bog	VDRLYKGKGHKVLSVMMSLAMFAVIVLSLAAGVGLGYAIIFGILYAFDRSRQAGHGAPAQVLHTSAGSD*
Ga0182014_100556562	3300014491	Bog	MMLALFAVVALSLAAGVGLGYAIIFGILHAFDRSRQSVKSASTRALTTSAGND*
Ga0182014_104937311	3300014491	Bog	MSLALVAVIILSLAAGVGLGYAIIFGILDLFDRSRHIIKAAPAQVLTTTAGSD*
Ga0182013_102500962	3300014492	Bog	MVAVVVLSLAAGVGLGYAIIFGILDLFDRSRQMIKPARAQVLTTSSGND*
Ga0182016_100015312	3300014493	Bog	MSLAMVSVIVLSLAVGVGLGYAIIFGILYVFDRSRHVMKPAPAQILTTSAGND*
Ga0182016_100147053	3300014493	Bog	MSLALFAVIVLSLAAGVGLGYAIIFGILYAFDRSRQAFHSAPARILNPSAGSD*
Ga0182016_100521712	3300014493	Bog	MMSLAMFAVIVLSLALGVGMGYAIIFGILYAFDRSRQSEQRVPAHARVFNTSAGSD*
Ga0182016_106972621	3300014493	Bog	MFLALFAVIALSLAAGVGLGYAIIFGILNAFDRSRQSVKGASAHALTTSAGND*
Ga0182021_117839402	3300014502	Fen	MSFALIAVIVLSLAAGVGLGYAIIFGILYIFDRSRETVKAPPAQLLNTPSGSR*
Ga0181516_100066101	3300014655	Bog	MSLAMIAVIVLSLAAGVGLGYAIIFGILDVFDRSRPRIKPASAQIFTTSSGND*
Ga0181516_100800182	3300014655	Bog	MSLALIAVVVLSLAAGVGLGYAIIFGILHAFDRSRQAIKAAPAQVLTSSAGND*
Ga0181522_104298522	3300014657	Bog	MSLAMFAVIALSLAAGVGLGYATIFGILRLFDLSRQSIETTPARLLDTST
Ga0182030_1000007290	3300014838	Bog	MFLALSAVIVLSLAAGVGLGYAIIFGILYVFDRSRQSIKAPPARALTNSAGSD*
Ga0182030_1000337814	3300014838	Bog	MSFALIAVIVLSLAAGVGLGYAIIFGILYVFDRSRHLIKATPAQVLTTSAGSD*
Ga0182030_102328284	3300014838	Bog	MMLALFAVIALSLAAGVGLGYAIIFGILHAFDRSRLSAKAASSCALTTSAGND*
Ga0182030_103099541	3300014838	Bog	RYNVLSLAMSLALFAVIALSLAAGVGLGYAIIFGILLLFDRSRRSIKTAPARLLDTSTGSD*
Ga0182030_103166283	3300014838	Bog	LALFAVIVLSLAAGVGLGYAIIFGILYAFDRSRQAFHSAPARILNPSAGSD*
Ga0181500_10729702	3300016728	Peatland	VLSFAMSLAMIAVVVLSLAAGVGLGYAIIFGILDLFDRSRHTIKAPAQVLTTSSGND
Ga0187847_102854091	3300017948	Peatland	MFVALSAVILLSLAAGVGLGYAIIFGILYAFDRSRQSIQGAPARALTSAGSD
Ga0181520_1000007990	3300017988	Bog	MSLVLCAVIALSLAAGIGLGYAIIFGILNAFDRSRQAIQAAPAQVLNTSAGGN
Ga0181520_1000021615	3300017988	Bog	MSLAMFAVIALSLAAGVGLGYATIFGILRLFDLSRQSIKTTPARLLDTSTGSN
Ga0181520_1001427311	3300017988	Bog	VFSIAMSLALIAVIVLSLAAGVGLGYAIIFGILHAFDRSRQLVQAAPAQVLNTSAGSN
Ga0181520_101676412	3300017988	Bog	MSVALISVVVLSLAAGVGLGYAIIFGILYAFDRSRQFVKAAPVQVLSSPAGHD
Ga0181520_104952783	3300017988	Bog	AMIAVIVLSLAAGVGLGYAIIFGILDVFDRSRPRIKPSPAQILTTSSGND
Ga0187863_104441591	3300018034	Peatland	MSLVLFSVIALSLAAGIGLGYAIIFGILNAFDRSRQAIQAAPAQVLNTSAGGD
Ga0187871_100387901	3300018042	Peatland	MIAVVLLSLAAGVGLGYAIIFGILYLFDRSRQSVHPAPAGALRTSAGGD
Ga0187871_106250152	3300018042	Peatland	VGLGYAIIFGILYVFDRSRQSFQRAPVRVLNTFAGSD
Ga0187887_103701402	3300018043	Peatland	MSLALFAVIVLSLAAGVGLGYAIIFGILYAFDRSRQAIHSAPARILNPSAGSD
Ga0187887_107037452	3300018043	Peatland	MMLALFAVVALSLAAGVGLGYAIIFGILHAFDRSRQSVKSASTRALTTSAGND
Ga0187784_107050922	3300018062	Tropical Peatland	AREEGHSVLSVMMSLAMIAVVLLSLAAGVGLGYAIIFAILYLFDRSRQSVHPAPAGALRTSAGGD
Ga0187852_12407301	3300019082	Peatland	MLIALSAVIVLSLAAGVGLGYAIIFGILYAFDRSRQSIKAAPSRALTTSAGND
Ga0181508_13473422	3300019256	Peatland	MIAVVVLSLAAGVGLGYAIIFGILDLFDRSRHTIKAPAQVLTTSSGND
Ga0181508_14200632	3300019256	Peatland	MSLALVAVIILSLAAGVGLGYAIIFGILDLFDRSRHIIKAAPAQVLTTPAGSD
Ga0181512_10208082	3300019270	Peatland	LVMSLALVAVIILSLAAGVGLGYAIIFGILDLFDRSRHIIKAAPAQVLTTPAGSD
Ga0182031_11643312	3300019787	Bog	VLSLVMSLAMVSVIVLSLAVGVGLGYAIIFGILYVFDRSRHVMKPAPAQILTTSAGND
Ga0224532_10003231	3300022863	Soil	IVLSLAMSLALFAVIALSLAAGVGLGYAIIFGILDLFDRSRHSIQAAPAQLFNISGGSD
Ga0224527_10031677	3300022877	Soil	MSLAMVAVVVLSLAAGVGLGYAIIFGILDLFDRSRQMIKPARAQVLTTSSGND
Ga0224529_10470332	3300023247	Soil	MSLAMVAVIVLSLAAGVGLGYAIIFGILDVFDRSRHMIKPAPAQILNTSAGND
(restricted) Ga0255336_10032746	3300028024	Sandy Soil	VFSLMSLVMFAVIVLSLAAGVGLGYAIIFGILNLFDRSRQMIKTAPAQILTTSSGSD
Ga0255352_10417062	3300028082	Soil	MIAVIVLSLAAGVGLGYAIIFGILDLFDRSRHTIKAPAQVLTTSSGND
Ga0255356_10155912	3300028084	Soil	VISLVMSLALVAVIILSLAAGVGLGYAIIFGILDLFDRSRHIIKAAPAQVLTTTAGSD
Ga0255356_10480842	3300028084	Soil	MSLAMVAVIVLSLAAGVGLGYAIIFGILDVFDRSRHMIKPAPAQILN
Ga0268263_100076612	3300028326	Bioreactor	MKVEGIKVLSLVMSIAMVAVIVLSLAGGVGLGYAIIFGILNAFDRSRQLIKAAPTQVLTNSASSR
Ga0302267_102461022	3300028745	Bog	MSFALIAVIVLSLAAGVGLGYAIIFGILYVFDRSRHLIKATPAQVLTTSAGSD
Ga0302156_100840952	3300028748	Bog	MSLAMVSVIVLSLAVGVGLGYAIIFGILYVFDRSRHVMKPAPAQILTTSAGND
Ga0302202_103358011	3300028762	Bog	VIVLSLAVGVGLGYAIIFGILYVFDRSRHVMKPAPAQILTTSAGND
Ga0302279_102307631	3300028783	Bog	AMSLALFAVIALSLAAGVGLGYAIIFGILDLFDRSRHSIQAAPAQLFNISGGSD
Ga0311362_111194221	3300029913	Bog	LSLVMSLAMVAVIVLSLAAGVGLGYAIIFGILDVFDRSRHMIKPAPAQILNTSAGND
Ga0302148_10647042	3300029916	Bog	MSLAMVSVIVLSLAVGVGLGYAIIFGILYVFDRSRHVMKPAPAQI
Ga0311363_101591682	3300029922	Fen	MVSVIVLSLAVGVGLGYAIIFGILYVFDRSRHVMKPAPAQILTTSAGND
Ga0311346_105142662	3300029952	Bog	VLSLVMSLAMVAVIVLSLAAGVGLGYAIIFGILDVFDRSRHMIKPAPAQILNTSAGND
Ga0311343_108768321	3300029953	Bog	MSLALFAVIALSLASGVGLGYAIIFGILDLFDRSRHSIQAAPAQLFNISGGSD
Ga0302275_100135971	3300030518	Bog	VMSLALVAVIILSLAAGVGLGYAIIFGILDLFDRSRHIIKAAPAQVLTTTAGSD
Ga0302275_103980461	3300030518	Bog	MSLALFAVIALSLAAGVGLGYAIIFGILDLFDRSRHSIQAAPAQLFNISG
Ga0311345_101224121	3300030688	Bog	MSLALVAVIILSLAAGVGLGYAIIFGILDLFDRSRHIIKAAPAQVLTTTAGS
Ga0311345_103318532	3300030688	Bog	VLSLAMSLALFAVIALSLAAGVGLGYAIIFGILDLFDRSRHSIQAAPAQLFNISGGSD
Ga0302320_1001574815	3300031524	Bog	MSLALFAVIALSLAAGVGLGYAIIFGILDLFDRSRHSIQAAPAQLFNISGGSD
Ga0302320_102256653	3300031524	Bog	MFLALFAVIALSLAAGVGLGYAIIFGILNAFDRSRQSVKGASAHALTTSAGND
Ga0302320_116727492	3300031524	Bog	MSLAMIAVIVLSLAAGVGLGYAIIFGILDVFDRSRPRIKPAPAQILTTSSGND
Ga0302320_121619591	3300031524	Bog	MSLALISVIVLSLAAGVGLGYAIIIGILYAFDRSRHSIKAVPAQQILNTSSGSD
Ga0316217_1000186526	3300031813	Freshwater	MMSLAMFAVIVLSLAAGVGLGYAIIFGILYAFDRSRQSVQRVPAQVFHTSAGGN
Ga0316217_100198602	3300031813	Freshwater	MSLALLAVIVLSLAAGVGLGYAIIFGILNLFDRSRRAVEAPPTRALTTSAGND
Ga0316217_100614582	3300031813	Freshwater	MTLALVAVIILSLAAGVGLGYAIIFGILNLFDRSRHTIKAAPARVLTSAGGD
Ga0316220_10053466	3300031884	Freshwater	MSLALIAVIILSLAAGVGLGYAIIFGILYLFDRSRQMIKAAPAQVLSTPAGSD
Ga0316218_10244342	3300032117	Freshwater	VISLVMSLALIAVIILSLAAGVGLGYAIIFGILYLFDRSRQMIKAAPAQVLSTPAGSD
Ga0316231_11607972	3300032722	Freshwater	RLEGIQVLSLFMSLALLAVIVLSLAAGVGLGYAIIFGILNLFDRSRRSVEAPPTRALTTSAGND
Ga0326728_1001172220	3300033402	Peat Soil	MSLVLCAVIALSLAAGIGLGYAIIFGILNAFDRSRQAIQAAPAQVLNTSAGGD
Ga0326728_100157361	3300033402	Peat Soil	MSLAMFAVIALSLAAGVGLGYATIFGILRLFDLSRQSIKTTPARLFDTSTGSN
Ga0326728_100276595	3300033402	Peat Soil	LEKAETVLSLAMSVAMLAVIILSLAFGVGLGYAIIFGILYLFDRSRQSFKTTPAQVLTTSAGHD
Ga0326728_100509284	3300033402	Peat Soil	MSLVLVFVVLLSLAAGIGLGYAIIFSILYIFDRSRQSIQARPVQALNLSAGGD
Ga0326728_103666041	3300033402	Peat Soil	MSLVLIAVILLSLAAGIGLGYAIIFGILHAFDRSRQSVQARPVQILNSSAGD
Ga0326727_1002313112	3300033405	Peat Soil	MSLVMVFVVLLSLAAGIGLGYAIIFSILYIFDRSRQSIQARPVQALNLSAGGD
Ga0326727_100393942	3300033405	Peat Soil	MSLVLVFVVLLSLAAGIGLGYAIIFSILYIFDRSRQSIQARPVQALNLPAGGD
Ga0371489_0254353_641_802	3300033755	Peat Soil	MSVAMIAVILLSLAVGVGLGYAIIFGILYVFDRSRQTFQPATAQILNTSAGSD
Ga0334792_004607_2627_2791	3300033888	Soil	MMLLAMFAVIVLSLAAGVGLGYAIIFGILYAFDRSRQPGRRVPAQVFNPSAGSH
Ga0371488_0114313_226_375	3300033983	Peat Soil	MVFVVLLSLAAGIGLGYAIIFSILYIFDRSRQSIQARPVQALNLSAGGD
Ga0370483_0000290_12296_12451	3300034124	Untreated Peat Soil	MSLALISVIALSLAAGVGLGFAIIYGILYVFDRSRQSIKSGATQILTTSAD
Ga0370494_058352_685_846	3300034130	Untreated Peat Soil	MSFALIAVIVLSLAAGVGLGYAIIFGILYVFDRSRHLIKAAPAQVLTTSAGSD
Ga0370494_079283_13_174	3300034130	Untreated Peat Soil	MSLALIAVIVLSLAAGVGLGYAIIFGILYIFDRSRQSIKVTPARILTTSAGND
Ga0370494_157592_154_315	3300034130	Untreated Peat Soil	MSLAMIAVIVLSLAAGVGLGYAIIFGILYVFDRSRQSFEAAPAQALTISAGHD
Ga0370515_0000004_52185_52334	3300034163	Untreated Peat Soil	MFAVIILSLAAGVGLGYAIIFGILYAFDRSRRPVHGAPSQLLNTSAGSH
Ga0370515_0041799_1324_1488	3300034163	Untreated Peat Soil	MMSLAMFAVILLSLAAGVGLGYAIIFGILYAFDRSRQSVQRVPAQVLHTSAGGD
Ga0370515_0108398_62_232	3300034163	Untreated Peat Soil	MMSLAMFAVVLLSLAAGVGMGYAIIVGILYAFDRSRHSEQRVPAHAQVFNTSAGSD
Ga0370515_0266103_525_689	3300034163	Untreated Peat Soil	MMSLAMFAVIVLSLAAGVGLGYAIIFGILYAFDRSRQPVETVPAQIFHASAGSN
Ga0370514_002261_3085_3249	3300034199	Untreated Peat Soil	MMSLAMFAVIVLSLAAGVGLGYAIIFGILYAFDRSRQPVENVPAQIFHASAGSN
Ga0370514_034494_970_1131	3300034199	Untreated Peat Soil	MFIALSAVIVLSLAAGVGLGYAIIFGILYAFDRSRQSIKVAPSRALTTSAGSD
Ga0370514_035561_922_1092	3300034199	Untreated Peat Soil	MMSLAMFAVIVLSLALGVGMGYAIIFGILYAFDRSRQSEQRVPAHARVFNTSAGSD
Ga0370492_0026042_337_498	3300034282	Untreated Peat Soil	MTLSMFAVIVLSLAAGVGLGYAVIFGILYAFDRSRQLLGPAPAQVLTTSAGRD
Ga0370492_0031081_1780_1941	3300034282	Untreated Peat Soil	MSIVLCAVIALSLAAGIGLGYAIIFGILNAFDRSRQAIQAAPAQVLNTSAGGD
Ga0370492_0276774_513_680	3300034282	Untreated Peat Soil	MSLAMFAVIVLSLALGVGMGYAIIFGILYAFDRSRQSEQRVPAHARVFNTSAGSD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters