Metagenome / Metatranscriptome Family F076881

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076881
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	66 residues
Representative Sequence	MSTSRAVTRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Number of Associated Samples	62
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.46 %
% of genes near scaffold ends (potentially truncated)	18.80 %
% of genes from short scaffolds (< 2000 bps)	65.81 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.214 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand (38.462 % of family members)
Environment Ontology (ENVO)	Unclassified (38.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.120 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.92% β-sheet: 8.33% Coil/Unstructured: 68.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00912	Transgly	40.17
PF02591	zf-RING_7	2.56
PF11611	DUF4352	1.71
PF00717	Peptidase_S24	0.85
PF00459	Inositol_P	0.85
PF00300	His_Phos_1	0.85
PF13185	GAF_2	0.85
PF01599	Ribosomal_S27	0.85
PF00905	Transpeptidase	0.85
PF06172	Cupin_5	0.85
PF12288	CsoS2_M	0.85
PF06897	DUF1269	0.85
PF06348	DUF1059	0.85
PF02272	DHHA1	0.85
PF13534	Fer4_17	0.85
PF05598	DUF772	0.85
PF04075	F420H2_quin_red	0.85
PF01329	Pterin_4a	0.85
PF00293	NUDIX	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	40.17
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	40.17
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	40.17
COG1579	Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain	General function prediction only [R]	2.56
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.85
COG3542	Predicted sugar epimerase, cupin superfamily	General function prediction only [R]	0.85
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.21 %
Unclassified	root	N/A	24.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.21 %
Unclassified	root	N/A	24.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.21 %
Unclassified	root	N/A	24.79 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	69.23 %
Unclassified	root	N/A	24.79 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	69.23 %
Unclassified	root	N/A	24.79 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	48.72 %
Unclassified	root	N/A	24.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	44.44 %
Unclassified	root	N/A	24.79 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.13 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	3.42 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	44.44 %
Unclassified	root	N/A	24.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.13 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples	3.42 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	44.44 %
Unclassified	root	N/A	24.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.13 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	3.42 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120362505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1015	Open in IMG/M
3300006034\|Ga0066656_10785800	Not Available	610	Open in IMG/M
3300007790\|Ga0105679_10644268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1406	Open in IMG/M
3300010039\|Ga0126309_10919511	Not Available	581	Open in IMG/M
3300010045\|Ga0126311_11490889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	566	Open in IMG/M
3300010045\|Ga0126311_11695153	Not Available	534	Open in IMG/M
3300010166\|Ga0126306_11854102	Not Available	505	Open in IMG/M
3300011244\|Ga0137483_102434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2142	Open in IMG/M
3300012043\|Ga0136631_10019093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2462	Open in IMG/M
3300012043\|Ga0136631_10040667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1723	Open in IMG/M
3300012043\|Ga0136631_10262668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	682	Open in IMG/M
3300012043\|Ga0136631_10390634	Not Available	563	Open in IMG/M
3300012043\|Ga0136631_10464507	Not Available	518	Open in IMG/M
3300012045\|Ga0136623_10326401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	650	Open in IMG/M
3300012092\|Ga0136621_1009460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	4020	Open in IMG/M
3300012093\|Ga0136632_10260396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300012094\|Ga0136638_10015892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2772	Open in IMG/M
3300012094\|Ga0136638_10033566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2034	Open in IMG/M
3300012094\|Ga0136638_10408828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	640	Open in IMG/M
3300012526\|Ga0136637_1083187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1107	Open in IMG/M
3300012527\|Ga0136633_1001651	All Organisms → cellular organisms → Bacteria	16288	Open in IMG/M
3300012529\|Ga0136630_1201019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	716	Open in IMG/M
3300012678\|Ga0136615_10071732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1714	Open in IMG/M
3300012679\|Ga0136616_10029127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2717	Open in IMG/M
3300012679\|Ga0136616_10036340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2404	Open in IMG/M
3300012679\|Ga0136616_10276495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	767	Open in IMG/M
3300012679\|Ga0136616_10535577	Not Available	532	Open in IMG/M
3300012680\|Ga0136612_10032542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2616	Open in IMG/M
3300012680\|Ga0136612_10051388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2070	Open in IMG/M
3300012680\|Ga0136612_10070515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1761	Open in IMG/M
3300012680\|Ga0136612_10087891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1571	Open in IMG/M
3300012680\|Ga0136612_10092312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1531	Open in IMG/M
3300012680\|Ga0136612_10128479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1287	Open in IMG/M
3300012680\|Ga0136612_10243337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	914	Open in IMG/M
3300012680\|Ga0136612_10267234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	869	Open in IMG/M
3300012680\|Ga0136612_10531151	Not Available	597	Open in IMG/M
3300012680\|Ga0136612_10589905	Not Available	564	Open in IMG/M
3300012681\|Ga0136613_10039160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2724	Open in IMG/M
3300012684\|Ga0136614_10248602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1330	Open in IMG/M
3300012684\|Ga0136614_10946988	Not Available	594	Open in IMG/M
3300012684\|Ga0136614_11147420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	529	Open in IMG/M
3300013012\|Ga0169965_1079082	Not Available	647	Open in IMG/M
3300013013\|Ga0169969_1023623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1569	Open in IMG/M
3300013026\|Ga0170681_1001088	All Organisms → cellular organisms → Bacteria	12039	Open in IMG/M
3300013296\|Ga0157374_12131829	Not Available	587	Open in IMG/M
3300015083\|Ga0167624_1000525	Not Available	6486	Open in IMG/M
3300015158\|Ga0167622_1000212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31195	Open in IMG/M
3300015158\|Ga0167622_1009573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2478	Open in IMG/M
3300015159\|Ga0167630_1000520	All Organisms → cellular organisms → Bacteria	7402	Open in IMG/M
3300015159\|Ga0167630_1010327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1843	Open in IMG/M
3300015161\|Ga0167623_1001140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10203	Open in IMG/M
3300015161\|Ga0167623_1006821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3702	Open in IMG/M
3300015161\|Ga0167623_1035942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300015165\|Ga0167628_1090944	Not Available	543	Open in IMG/M
3300015168\|Ga0167631_1032551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	843	Open in IMG/M
3300015209\|Ga0167629_1003934	All Organisms → cellular organisms → Bacteria	5650	Open in IMG/M
3300015209\|Ga0167629_1009393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	3678	Open in IMG/M
3300015209\|Ga0167629_1025384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2133	Open in IMG/M
3300015209\|Ga0167629_1055939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1305	Open in IMG/M
3300015209\|Ga0167629_1175539	Not Available	567	Open in IMG/M
3300015371\|Ga0132258_10220069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4619	Open in IMG/M
3300015371\|Ga0132258_10862817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2285	Open in IMG/M
3300015371\|Ga0132258_11230824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1892	Open in IMG/M
3300015374\|Ga0132255_102970651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	724	Open in IMG/M
3300017695\|Ga0180121_10380014	Not Available	546	Open in IMG/M
3300017787\|Ga0183260_10000132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54663	Open in IMG/M
3300017787\|Ga0183260_10013107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6384	Open in IMG/M
3300017787\|Ga0183260_10137354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1749	Open in IMG/M
3300017787\|Ga0183260_10278954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1143	Open in IMG/M
3300017787\|Ga0183260_10353745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	986	Open in IMG/M
3300017789\|Ga0136617_10748060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	755	Open in IMG/M
3300017789\|Ga0136617_10815271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	717	Open in IMG/M
3300017789\|Ga0136617_10936189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	660	Open in IMG/M
3300017789\|Ga0136617_11203981	Not Available	569	Open in IMG/M
3300018432\|Ga0190275_11151991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	850	Open in IMG/M
3300018465\|Ga0190269_11709876	Not Available	531	Open in IMG/M
3300018466\|Ga0190268_10453523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	850	Open in IMG/M
3300018466\|Ga0190268_12241590	Not Available	512	Open in IMG/M
3300018468\|Ga0066662_10118441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1926	Open in IMG/M
3300018468\|Ga0066662_11644407	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	671	Open in IMG/M
3300018469\|Ga0190270_11194021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	799	Open in IMG/M
3300019360\|Ga0187894_10000408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	57932	Open in IMG/M
3300019360\|Ga0187894_10216706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	925	Open in IMG/M
3300019458\|Ga0187892_10004360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23879	Open in IMG/M
3300019458\|Ga0187892_10007625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15302	Open in IMG/M
3300019458\|Ga0187892_10019609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6634	Open in IMG/M
3300019458\|Ga0187892_10038173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	3616	Open in IMG/M
3300019458\|Ga0187892_10219646	Not Available	999	Open in IMG/M
3300019487\|Ga0187893_10368664	Not Available	987	Open in IMG/M
3300019767\|Ga0190267_10001972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4999	Open in IMG/M
3300019767\|Ga0190267_10129281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1064	Open in IMG/M
3300019767\|Ga0190267_10267921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300019767\|Ga0190267_10695324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	653	Open in IMG/M
3300020069\|Ga0197907_10242477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	671	Open in IMG/M
3300020070\|Ga0206356_11625062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1015	Open in IMG/M
3300020082\|Ga0206353_10386435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	603	Open in IMG/M
3300026325\|Ga0209152_10221835	Not Available	707	Open in IMG/M
3300027618\|Ga0208736_1017259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1824	Open in IMG/M
3300027618\|Ga0208736_1026593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1466	Open in IMG/M
3300028001\|Ga0247703_101362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1380	Open in IMG/M
3300028003\|Ga0247707_1000089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11932	Open in IMG/M
3300028003\|Ga0247707_1017080	Not Available	686	Open in IMG/M
3300028004\|Ga0247705_1019507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	645	Open in IMG/M
3300028041\|Ga0247719_1000124	All Organisms → cellular organisms → Bacteria	54483	Open in IMG/M
3300028041\|Ga0247719_1000152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49234	Open in IMG/M
3300028041\|Ga0247719_1002221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7308	Open in IMG/M
3300028104\|Ga0247713_1000195	All Organisms → cellular organisms → Bacteria	43469	Open in IMG/M
3300028578\|Ga0272482_10273447	Not Available	539	Open in IMG/M
3300028792\|Ga0307504_10022099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1594	Open in IMG/M
3300030006\|Ga0299907_10297365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1318	Open in IMG/M
3300031548\|Ga0307408_101389431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	661	Open in IMG/M
3300034143\|Ga0334961_004312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2307	Open in IMG/M
3300034174\|Ga0334932_048423	Not Available	726	Open in IMG/M
3300034760\|Ga0334948_144136	Not Available	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.87%
Host-Associated	Host-Associated	5.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.70%
Aquatic	Environmental → Aquatic	40.17%
Plants	Host-Associated → Plants	5.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.30%
Freshwater	Environmental → Aquatic → Freshwater	40.17%
Cave	Environmental → Terrestrial → Cave	6.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.42%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	2.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.59%
Ice	Environmental → Aquatic → Freshwater → Ice	40.17%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	6.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.42%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.71%
Loam	Environmental → Terrestrial → Soil → Loam	0.85%
Sand	Environmental → Terrestrial → Soil → Sand	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	40.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	6.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.42%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.56%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.71%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.85%

Habitat	Taxonomy	Distribution
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	38.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.09%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	13.68%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	4.27%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.56%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	2.56%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	2.56%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011244	Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 18 - S13.2.60.3.a - transect 2, repeat 3, age 113 years, surface depth)	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012526	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ857 (21.06)	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300013012	Gypsum rock endolithic microbial communities from the Atacama Desert, Chile - Cordon de Lila	Environmental	Open in IMG/M
3300013013	Gypsum rock endolithic microbial communities from the Atacama Desert, Chile - Monturaqui	Environmental	Open in IMG/M
3300013026	Gypsum rock hypoendolithic microbial communities from the Atacama Desert, Chile - Cordon de Lila	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015083	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1C, Ice margin)	Environmental	Open in IMG/M
3300015158	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)	Environmental	Open in IMG/M
3300015159	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3C, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015161	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1B, Ice margin)	Environmental	Open in IMG/M
3300015165	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3A, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015168	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015209	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027618	Polar desert microbial communities from Antarctic Dry Valleys - UQ255 (SPAdes)	Environmental	Open in IMG/M
3300028001	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-1-E_N	Environmental	Open in IMG/M
3300028003	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-2-E_N	Environmental	Open in IMG/M
3300028004	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-2-W_N	Environmental	Open in IMG/M
3300028041	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-1-E_D	Environmental	Open in IMG/M
3300028104	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-1-E_N	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300034143	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 57SNS	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M
3300034760	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 44SMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1203625051	3300002568	Soil	LATSTGRAVTRKTYRCPECYARVVGEPDDDAKTTLWLHSLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0066656_107858001	3300006034	Soil	RSSRLLHRKPMPRITIRCPECYARVVVAEGDDDEQTALWLHGLSGRCRAKQTPKADRPRRKERLEAMLGEEWG*
Ga0105679_106442682	3300007790	Soil	MPRTTIRCPECYARVVVAESEHDEQTALWLHGLSGRCRAKQTPKADRPRRKERLEAMLGEEWG*
Ga0126309_109195111	3300010039	Serpentine Soil	MASSRALPRKVYRCPECYARVVGEPDDDDKTTLWLHSLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0126311_114908891	3300010045	Serpentine Soil	MATSRAVIRKVYRCPECYARVVGEPDDDAKTTLWMHSLSGRCRAKQTPKTEKPRRKERLEAML
Ga0126311_116951531	3300010045	Serpentine Soil	VYRCPECYARVVGEPDEDDKTTLWLHSLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0126306_118541022	3300010166	Serpentine Soil	MRPKIFRCPECFARVVGDPEDDAPTALWLHGLSGRCRAKQTGKSEKPRRKERLEAMLGEEWG*
Ga0137483_1024342	3300011244	Glacier Forefield Soil	MTSKTITPKTMTPKTFRCPECYARVVAEPDDDAKTALWLHGLSGRCRAKQTPKAEKPRRKERLEAMLGEEWG*
Ga0136631_100190931	3300012043	Polar Desert Sand	MASRALTRKVYRCPECYTRVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAILGEEWG*
Ga0136631_100406672	3300012043	Polar Desert Sand	MSTSRAPTRKTYRCPECFARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0136631_102626681	3300012043	Polar Desert Sand	VPSGRFARKVYRCPACYARVVGEPDDDATTTLWLHGLSGRCPAKMTPKTEKPRRKERLEALLGEEWG*
Ga0136631_103906342	3300012043	Polar Desert Sand	MTKTTSTPKTFRCPECYARVVIEPDDDAKSALWLHGLSGRCRAKQTPKAEKPRRKERLEAMLGEEWG*
Ga0136631_104645071	3300012043	Polar Desert Sand	MSTSRAATRKVYRCPECYARVVGEPDEDAKTTLWLHSLSGRCRAKLTPKTEKPRRKERLEAMLGEEWG*
Ga0136623_103264012	3300012045	Polar Desert Sand	MSSRAVTRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0136621_10094604	3300012092	Polar Desert Sand	MSTGRAFTRKVYRCPECYARVVGEPDDDATTTLWLHGLSGRCPAKMTPKTEKPRRKERLEALLGEEWG*
Ga0136632_102603961	3300012093	Polar Desert Sand	RDAGPEPAMSTGRAFTRKVYRCPECYARVVGEPDDDATTTLWLHGLSGRCRAKITPKTEKPRRKERLEALLGEEWG*
Ga0136638_100158926	3300012094	Polar Desert Sand	MSSSRALIRKIYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPKRKERLEALLGEEWG*
Ga0136638_100335661	3300012094	Polar Desert Sand	RKVYRCPECYARVVGEPDDDATTTLWLHGLSGRCPAKMTPKTEKPRRKERLEALLGEEWG
Ga0136638_104088282	3300012094	Polar Desert Sand	MATSRPLTRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKATAKTEKPRRKERLEAMLGEEWG*
Ga0136637_10831871	3300012526	Polar Desert Sand	MSTGRASTRKVYRCPECYARVVGEPDDDATTTLWLHGLSGRCPAKMTPKTEKPRRKERLEALLGE
Ga0136633_100165110	3300012527	Polar Desert Sand	MASRALTRKVYRCPECYTRVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0136630_12010191	3300012529	Polar Desert Sand	MATSRPLTRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKTTPKTEKPRRKERLEALLGEEWG*
Ga0136615_100717321	3300012678	Polar Desert Sand	TWERNAGSGLAMSTSRAVTRKVYRCPECYARVVGEPGDDAKTTLWLHGLSGRCRAKMTPKTEKPRRKERLEAMLGEEWG*
Ga0136616_100291273	3300012679	Polar Desert Sand	MSTSRAVTRKVYRCPECYARVVGEPGDDAKTTLWLHGLSGRCRAKMTPKTEKPRRKERLEAMLGEEWG*
Ga0136616_100363406	3300012679	Polar Desert Sand	MSRIIRCPECYARVTVGAEEDTQTALWLHGLSGRCRAKQTPKTERPRRKERLEAMLGEEWG*
Ga0136616_102764952	3300012679	Polar Desert Sand	MPKSTPKTKPRPTIRCPDCYTRLVVEADDDTQTTLWLHGLSGRCRARQIPKAERPRRKE
Ga0136616_105355771	3300012679	Polar Desert Sand	MSTGRASTRKVYRCPECYARVVGEPDDDATTTLWLHGLSGRCPAKMTPKTEKPRRKERLEALLGEEWG*
Ga0136612_100325422	3300012680	Polar Desert Sand	MATGRALTRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTQKTEKPRRKERLEALLGEEWG*
Ga0136612_100513882	3300012680	Polar Desert Sand	MATRAGPEPAVPTGRAVTRKVYRCPECYARVVGEPDDDATTTLWLHGLSGRCRAKITPKTEKPRRKERLEALLGEEWG*
Ga0136612_100705154	3300012680	Polar Desert Sand	MTKTYRCPDCFARVVADPDDDKTTALWLHGLSGRCRAKMTPKTEKPRRKERLEAILGEEWG*
Ga0136612_100878912	3300012680	Polar Desert Sand	MSTSRAVTRKVYRCPDCYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0136612_100923124	3300012680	Polar Desert Sand	MPKSTPKTKPRPTIRCPDCYTRLVVEADDDTQTTLWLHGLSGRCRARQTPKAERPRRKERLEAILGEEWG*
Ga0136612_101284792	3300012680	Polar Desert Sand	MATSRALTRKVYRCPECYARVVGEPGDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0136612_102433372	3300012680	Polar Desert Sand	VPSGRFARKVHRCPACYARVVGEPDDDATTTLWLHGLSGRCPAKMTPKTEKPRRKERLEALLGEEWG*
Ga0136612_102672341	3300012680	Polar Desert Sand	PRPTIRCPDCYTRLVVEADDDTQTTLWLHGLSGRCRARQIPKAERPRRKERLEAILGEEWG*
Ga0136612_105311511	3300012680	Polar Desert Sand	KAGIRPMATSRALTRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0136612_105899052	3300012680	Polar Desert Sand	MSTSRPLTRKAYRCPECYARVVGEPGDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0136613_100391605	3300012681	Polar Desert Sand	MPKSTPKTKPRPTIRCPDCYTRLVVEADDDTQTTLWLHGLSGRCRARQIPKAERPRRKERLEAILGEEWG*
Ga0136613_102324602	3300012681	Polar Desert Sand	DCYARVVGEPDDDAKTTLWLHGLSGRCRAKTTPKTEKPRRKERLEALLGEEWG*
Ga0136614_102486023	3300012684	Polar Desert Sand	MTKTYRCPDCFARVVAEPDDDKTTALWLHGLSGRCRAKMTPKTEKPRRKDRLEAMLGEEWG*
Ga0136614_107366472	3300012684	Polar Desert Sand	CYARVVGEPDDDAKTTLWLHGLSGRCRAKMTPKTEKPRRKERLEAMLGEEWG*
Ga0136614_109469882	3300012684	Polar Desert Sand	MASRALTRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAILGEEWG*
Ga0136614_111474201	3300012684	Polar Desert Sand	MSTSRAVTRRTYRCPECYARVVGEPDDDAKTTLWLHSLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0169965_10790822	3300013012	Rock	MTKTYRCPDCFARVVAEPDEDKKTALWLHGLSGRCRAKMTPKTEKPRRKERLEAMLGEEWG*
Ga0169969_10236232	3300013013	Rock	MTKTYRCPECFARVVAEPDEDKKTALWLHGLSGRCRAKMTPKTEKPRRKERLEAMLGEEWG*
Ga0170681_10010886	3300013026	Rock	MTKTYRCPECFARIVAEPDEDKKTALWLHGLSGRCRAKMTPKTEKPRRKERLEAMLGEEWG*
Ga0157374_121318291	3300013296	Miscanthus Rhizosphere	RAVTRKTYRCPECYARVVGEPDDDAKTTLWLHSLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0167624_10005259	3300015083	Glacier Forefield Soil	MIRCPECYTRVVVEPDDDTKTTLWLHGLSGRCRAKQTPKAERPRRKERLEAMLGEEWG*
Ga0167622_100021211	3300015158	Glacier Forefield Soil	MPRTTIRCPECYSRVVVERHDDTRTTLWLHGLSGRCRARQIPKAERPRRKERLDAILGEEWG*
Ga0167622_10095732	3300015158	Glacier Forefield Soil	MPRITIRCPECYSRVVVEPDEDTQTTLWLHGLSGRCRARQIPKAERPRRKERLEAMLGEEWG*
Ga0167630_10005207	3300015159	Glacier Forefield Soil	MPRTTIRCPECYSRVVVEGDDDLKATLWLHGLSGRCRARQIPKAERPRRKDRLDAILGEEWG*
Ga0167630_10103272	3300015159	Glacier Forefield Soil	MPRTTIRCPECYSRIPVERHDDTKTTLWLHGLSGRCRARQIPKAERPRRKERLEAILGEEWG*
Ga0167623_10011404	3300015161	Glacier Forefield Soil	MPRITIRCPECYSRVVVEPDDDTQTTLWLHGLSGRCRARQIPKAERPRRKERLEAMLGEEWG*
Ga0167623_10068212	3300015161	Glacier Forefield Soil	MPRTTVRCPECYARVVVAADDDTQTTLWLHGLSGRCRARQIPKAERPRRKERLEAMLGEEWG*
Ga0167623_10359422	3300015161	Glacier Forefield Soil	MSTGRTASIGTASRAAAAKPGKTGVGKAYRCPECYARVVGEPDEDAKTTLWLHGLSGRCRAKLTPKTEKPRRKERLEAMLGEEWG*
Ga0167628_10909442	3300015165	Glacier Forefield Soil	MPRNTIRCPECYSRVVVERDDDSRTTLWMHGLSGRCRARQIPKAERPRRKERLETMLGEEWR*
Ga0167631_10325511	3300015168	Glacier Forefield Soil	MPRITIRCPECYSRLIVEPDDDTKTTLWLHGLSGRCRARQIPKAERPRRKERLEAILGEEWG*
Ga0167629_100393410	3300015209	Glacier Forefield Soil	MPRITIRCPECYSRVVVEPDDDTQTTLWMHGLSGRCRARQIPKAERPRRKERLEAMLGEEWG*
Ga0167629_10093931	3300015209	Glacier Forefield Soil	MPRNTIRCPECYSRVVVERDDDSRTTLWMHGLSGRCRARQIPKAERPRRKERLEAMLGEEWR*
Ga0167629_10253842	3300015209	Glacier Forefield Soil	MAGGRAATRKVYRCPDCYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0167629_10559392	3300015209	Glacier Forefield Soil	AGMGKAYRCPECYARVVGEPDEDAKTTLWLHSLSGRCRAKLTPKTEKPRRKERLEALLGEEWG*
Ga0167629_11755392	3300015209	Glacier Forefield Soil	MPRITIRCPECYSRVVIEPDDDAQTTLWLHGLSGRCRARQIPKAERPRRKERLEAML
Ga0132258_102200693	3300015371	Arabidopsis Rhizosphere	MATSRAATRKVYRCPECYARFVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0132258_108628174	3300015371	Arabidopsis Rhizosphere	MSTSKAVTRKVYRCPECYTRVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0132258_112308244	3300015371	Arabidopsis Rhizosphere	MSTSRAVTRKAYRCPECYARVVGEPGDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG*
Ga0132255_1029706513	3300015374	Arabidopsis Rhizosphere	MATSRAATRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAML
Ga0180121_103800142	3300017695	Polar Desert Sand	MTKTYRCPDCFARVVAEPDDDKTTALWLHGLSGRCRAKMTPKTEKPRRKERLEAMLGEEW
Ga0183260_1000013232	3300017787	Polar Desert Sand	MSRIIRCPECYARVTVGAEEDTQTALWLHGLSGRCRAKQTPKTERPRRKERLEAMLGEEW
Ga0183260_100131077	3300017787	Polar Desert Sand	MPKSTPKTKPRPTIRCPDCYTRLVVEADDDTQTTLWLHGLSGRCRARQIPKAERPRRKERLEAILGEEWG
Ga0183260_101373541	3300017787	Polar Desert Sand	MTKTYRCPDCFARVVAEPDDDKTTALWLHGLSGRCRAKMTPKTEKPRRKERLEAMFGEEW
Ga0183260_102789542	3300017787	Polar Desert Sand	MSTSKAVARKAYRCPECYARVVGEPGDDAKTTLWLHGLSGRCRAKQTPKTEKPKRKERLEAMLGEEWG
Ga0183260_103537453	3300017787	Polar Desert Sand	MTKTYRCPECFARVVAEPDDDKTTALWLHGLSGRCRAKMTPKTEKPRRKERLEAMLGEEW
Ga0136617_107480602	3300017789	Polar Desert Sand	MSTSRAVTRRTYRCPECYARVVGEPDDDAKTTLWLHSLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0136617_108152712	3300017789	Polar Desert Sand	GRFAVATPTRRPLTPRTYRCPECFARVVGEPGDDAKTTLWLHSLSGRCRAKQTPKTEPRRKERLEAMLGEEWG
Ga0136617_109361892	3300017789	Polar Desert Sand	GKTMPKSTPKTKPRPRIRCPDCYTRLVVEADDDTQTTLWLHGLSGRCRARQIPKAERPRRKERLEAILGEEWG
Ga0136617_112039812	3300017789	Polar Desert Sand	MATSRPLTRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKATAKTEKPRRKERLEAMLGEEWG
Ga0190275_111519913	3300018432	Soil	MASRALTRKVYRCPECYTRVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0190269_117098762	3300018465	Soil	MAMSRAVTRKTYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0190268_104535231	3300018466	Soil	VYRCPECYARVVGEPDDDKKTTLWLHGLSGRCRAKMTPKTEKPRRKERLEAMLGEEWG
Ga0190268_122415901	3300018466	Soil	KVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRREERLEAMLGEEWG
Ga0066662_101184412	3300018468	Grasslands Soil	MPRTTIRCPECYTRVVVQPEDDTKTALWLHGLSGRCRAKQTPKTERPRRKERLEAMLGEEWG
Ga0066662_116444071	3300018468	Grasslands Soil	IRCPECYARVVAGAEDDEQTALWLHGLSGRCRAKQTPKADRPRRKERLEAMLGEEWG
Ga0190270_111940212	3300018469	Soil	MSPSRAVTRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0187894_1000040850	3300019360	Microbial Mat On Rocks	MAKSFRCPECYARVVVEPGDDDKTTLWLHGLSGRCRAKATAKAEKPRRKERLEAMLGEEW
Ga0187894_102167062	3300019360	Microbial Mat On Rocks	MSTSRAATRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0187892_1000436014	3300019458	Bio-Ooze	MPTSFRCPECYARVVVEPGDDDKTTLWLHGLSGRCRAKLTPKTEKPRRKERLEAMLGEEW
Ga0187892_100076252	3300019458	Bio-Ooze	MARITIRCPECYARVVAANEDDEQTALWLHGLSGRCRAKQTPKTERPRRKERLEAMLGEEWG
Ga0187892_100196094	3300019458	Bio-Ooze	MPRTTIRCPECYGRVIAESEDDEPTALWLHGLSGRCRAKQTPKADRPRRKERLEAMLGEEWG
Ga0187892_100381732	3300019458	Bio-Ooze	MPRTTIRCPDCYARVVAAAEDDEQTALWLHGLSGRCRAKQTPKADRPRRKERLEAMLGEEWG
Ga0187892_102196462	3300019458	Bio-Ooze	MPRTTIRCPECYGRVVAESGDDEPTALWLHGLSGRCRAKQTPKADRPRRKERLEAMLGEEWG
Ga0187893_103686642	3300019487	Microbial Mat On Rocks	VAPVSVLLGDLPSVPSKAVMPKTFRCPECYARVVVEPGDDDKTTLWLHGLSGRCRAKLTPKTEKPRRKERLEAMLGEEWG
Ga0190267_100019727	3300019767	Soil	MSTSRAVTRKEYRCPECYARVVGEPGDDAKTTLWLHGLSGRCRAKQTPKTEKPKRKERLEAMLGEEWG
Ga0190267_101292812	3300019767	Soil	VAAQPGRALTPKAYRCPECFARVVGEPDDDAKTTLWLHSLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0190267_102679212	3300019767	Soil	MSTSRAVTRKVYRCPECYARVVGEPDDDAKTTLWMHSLSGRCRAKLTPKTEKPRRKERLEAMLGEEWG
Ga0190267_106953242	3300019767	Soil	MPRLTIRCPECFARIVAEPDDDAKTTLWLHGLSGRCRAKVTAKTERPRRKERLEAILGEEWG
Ga0197907_102424771	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	LATSTGRAVTRKTYRCPECYARVVGEPDDDAKTTLWLHSLSGRCRAKQTPKTEKPRRKERLEAMLGEEQAGRVQHALAV
Ga0206356_116250623	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	LATSTGRAVTRKTYRCPECYARVVGEPDDDAKTTLWLHSLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0206353_103864352	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	LATSTGRAVTRKTYRCPECYARVVGEPDDDAKTTLWLHSLSGRCRAKQTPKTEKPRRKERLEAMLGEE
Ga0209152_102218352	3300026325	Soil	MPRITIRCPECYARVVVAEGDDDEQTALWLHGLSGRCRAKQTPKADRPRRKERLEAMLGEEWG
Ga0208736_10172592	3300027618	Polar Desert	VPSGRFVRKVYRCPACYARVVGEPDDDATTTLWLHGLSGRCPAKMTPKTEKPRRKERLEALLGEEWG
Ga0208736_10265932	3300027618	Polar Desert	MSTSRAVTRKAYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0247703_1013623	3300028001	Soil	MASSKAVSRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0247707_10000896	3300028003	Soil	MSRAVTRKTYRCPECYARVVGEPDDDAKTTLWLHSLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0247707_10170802	3300028003	Soil	VTHKPMPRTTIRCPECYARVVAGAEDDEQTALWLHGLSGRCRAKQTPKTERPRRKERLEAMLGEEWG
Ga0247705_10195071	3300028004	Soil	VTRKTYRCPECYARVVGEPDDDAKTTLWLHSLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0247719_10001244	3300028041	Soil	MSTSRAVSRKAYRCPECYARVVGEPDEDKVTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0247719_100015222	3300028041	Soil	MASSRAVSRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0247719_10022215	3300028041	Soil	MSTSRAVTRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0247719_11497531	3300028041	Soil	MSTSKAVTRKAYRCPECYARVVGEPGDDAKTTLWLHGLSGRCRAKQTPKTEKPKRK
Ga0247713_100019526	3300028104	Soil	MSTSKAVTRKAYRCPECYARVVGEPGDDAKTTLWLHGLSGRCRAKQTPKTEKPKRKERLEAMLGEEWG
Ga0272482_102734471	3300028578	Soil	MPRTIRCPECYTRVTAGPDDDTKTALWLHGLSGRCRAKQTPKTERPRRKERLEAMLGEEW
Ga0307504_100220992	3300028792	Soil	MRSKSFRCPDCYARVVAEAGDDDQTTLWLHGLSGRCRAKLTPKTEKPRRKERLEAMLGEEWG
Ga0299907_102973653	3300030006	Soil	MSTRRAVTRKVYRCPECYARVVGEPDDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0307408_1013894311	3300031548	Rhizosphere	MSTSRAVTRKAYRCPECYARVVGEPGDDAKTTLWLHGLSGRCRAKQTPKTEKPRRKERLEAMLGEEWG
Ga0334961_004312_951_1139	3300034143	Sub-Biocrust Soil	MRRLTIRCPECFARIVAEPDDDAKTTLWLHGLSGRCRAKQTAKTERPRRKERLEAMLGEEWG
Ga0334932_048423_439_627	3300034174	Sub-Biocrust Soil	MPRKTIRCPECYSRLVVERDDDADTTLWLHGLSGRCRGRQLPKVERPRRKERLEAMLGEEWG
Ga0334948_144136_160_366	3300034760	Sub-Biocrust Soil	MSSSKPVTRKAIRCPDCYARVVGEPGDDAKTTLWLHGLSGRCRAKQTPKTEKPKRKERLEAMLGEEWG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076881

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences