Metagenome / Metatranscriptome Family F075038

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075038
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	50 residues
Representative Sequence	MSRTWGLRDGKVLVVEDANTASLVVVARDLKDRDDKVAALEEVLRKLRA
Number of Associated Samples	68
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.19 %
% of genes near scaffold ends (potentially truncated)	18.49 %
% of genes from short scaffolds (< 2000 bps)	82.35 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.420 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (24.370 % of family members)
Environment Ontology (ENVO)	Unclassified (27.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (42.017 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.68% β-sheet: 23.38% Coil/Unstructured: 51.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.69.1.0: automated matches	d6eica_	6eic	0.72714
c.69.1.13: Thioesterases	d1thta_	1tht	0.70672
c.69.1.0: automated matches	d5hc0a_	5hc0	0.69979
c.69.1.4: Prolyl oligopeptidase, C-terminal domain	d4bcda2	4bcd	0.69002
c.69.1.0: automated matches	d5mifa_	5mif	0.68496

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF08669	GCV_T_C	5.88
PF12663	DUF3788	3.36
PF00583	Acetyltransf_1	2.52
PF00571	CBS	2.52
PF00144	Beta-lactamase	2.52
PF01625	PMSR	2.52
PF08734	GYD	2.52
PF00076	RRM_1	1.68
PF01833	TIG	1.68
PF11154	DUF2934	1.68
PF07238	PilZ	1.68
PF00034	Cytochrom_C	1.68
PF02096	60KD_IMP	0.84
PF11731	Cdd1	0.84
PF01061	ABC2_membrane	0.84
PF01053	Cys_Met_Meta_PP	0.84
PF00990	GGDEF	0.84
PF07676	PD40	0.84
PF13683	rve_3	0.84
PF01613	Flavin_Reduct	0.84
PF05448	AXE1	0.84
PF00753	Lactamase_B	0.84
PF08241	Methyltransf_11	0.84
PF07883	Cupin_2	0.84
PF04014	MazE_antitoxin	0.84
PF00171	Aldedh	0.84
PF14343	PrcB_C	0.84
PF03063	Prismane	0.84
PF07366	SnoaL	0.84
PF13407	Peripla_BP_4	0.84
PF03358	FMN_red	0.84
PF00903	Glyoxalase	0.84
PF02604	PhdYeFM_antitox	0.84
PF00497	SBP_bac_3	0.84
PF10544	T5orf172	0.84
PF04055	Radical_SAM	0.84
PF12695	Abhydrolase_5	0.84
PF13792	Obsolete Pfam Family	0.84
PF12680	SnoaL_2	0.84
PF00383	dCMP_cyt_deam_1	0.84
PF03690	UPF0160	0.84
PF12900	Pyridox_ox_2	0.84
PF13602	ADH_zinc_N_2	0.84
PF05015	HigB-like_toxin	0.84
PF13186	SPASM	0.84
PF13507	GATase_5	0.84
PF04191	PEMT	0.84
PF12464	Mac	0.84
PF01202	SKI	0.84
PF08448	PAS_4	0.84
PF01381	HTH_3	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	2.52
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	2.52
COG2367	Beta-lactamase class A	Defense mechanisms [V]	2.52
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	2.52
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	2.52
COG4286	Uncharacterized conserved protein, UPF0160 family	Function unknown [S]	0.84
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.84
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.84
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.84
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.84
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.84
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.84
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.84
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.84
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.84
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.84
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.84
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.84
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.84
COG1152	CO dehydrogenase/acetyl-CoA synthase alpha subunit	Energy production and conversion [C]	0.84
COG1151	Hydroxylamine reductase (hybrid-cluster protein)	Energy production and conversion [C]	0.84
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.84
COG0706	Membrane protein insertase Oxa1/YidC/SpoIIIJ	Cell wall/membrane/envelope biogenesis [M]	0.84
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.84
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.84
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.84
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.84
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.84
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.10 %
Unclassified	root	N/A	47.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.10 %
Unclassified	root	N/A	47.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.42 %
Unclassified	root	N/A	47.90 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.24 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	6.72 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	1.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	5.88 %
Candidatus Lokiarchaeota	phylum	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	1.68 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	1.68 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.84 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5.88 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	5.04 %
unclassified Lokiarchaeota	no rank	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota	1.68 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.68 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.68 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.84 %
Nitrospirae bacterium RBG_19FT_COMBO_55_12	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_55_12	0.84 %
Nitrospirae bacterium GWC2_56_14	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium GWC2_56_14	0.84 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.84 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Actinobacteria bacterium HGW-Actinobacteria-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium HGW-Actinobacteria-7	3.36 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.52 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1.68 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	1.68 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1.68 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.68 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.84 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.84 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.84 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.84 %
Nitrospirae bacterium RBG_19FT_COMBO_55_12	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_55_12	0.84 %
Nitrospirae bacterium GWC2_56_14	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium GWC2_56_14	0.84 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Actinobacteria bacterium HGW-Actinobacteria-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium HGW-Actinobacteria-7	3.36 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1.68 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1.68 %
Deltaproteobacteria bacterium RBG_16_54_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_54_11	0.84 %
Candidatus Sulfobium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium	0.84 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-10	0.84 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.84 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.84 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.84 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.84 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	0.84 %
Anaerolineae bacterium SM23_84	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium SM23_84	0.84 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.84 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.84 %
Nitrospirae bacterium RBG_19FT_COMBO_55_12	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_55_12	0.84 %
Nitrospirae bacterium GWC2_56_14	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium GWC2_56_14	0.84 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Actinobacteria bacterium HGW-Actinobacteria-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium HGW-Actinobacteria-7	3.36 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1.68 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1.68 %
Candidatus Sulfobium mesophilum	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum	0.84 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.84 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.84 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples	0.84 %
Deltaproteobacteria bacterium RBG_16_54_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_54_11	0.84 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-10	0.84 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.84 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.84 %
Anaerolineae bacterium SM23_84	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium SM23_84	0.84 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.84 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.84 %
Nitrospirae bacterium RBG_19FT_COMBO_55_12	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_55_12	0.84 %
Nitrospirae bacterium GWC2_56_14	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium GWC2_56_14	0.84 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Actinobacteria bacterium HGW-Actinobacteria-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium HGW-Actinobacteria-7	3.36 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1.68 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1.68 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.84 %
uncultured Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	0.84 %
Candidatus Sulfobium mesophilum	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum	0.84 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.84 %
Deltaproteobacteria bacterium RBG_16_54_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_54_11	0.84 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-10	0.84 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.84 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.84 %
Anaerolineae bacterium SM23_84	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium SM23_84	0.84 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.84 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.84 %
Nitrospirae bacterium RBG_19FT_COMBO_55_12	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_55_12	0.84 %
Nitrospirae bacterium GWC2_56_14	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium GWC2_56_14	0.84 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101717849	Not Available	613	Open in IMG/M
3300001213\|JGIcombinedJ13530_107139882	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300002179\|JGI24141J26756_1005005	All Organisms → cellular organisms → Bacteria	3954	Open in IMG/M
3300002179\|JGI24141J26756_1019554	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
3300002821\|Iso3TCLC_10087261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3124	Open in IMG/M
3300003473\|FeGluAir_10501038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1002	Open in IMG/M
3300003988\|Ga0055475_10235624	Not Available	581	Open in IMG/M
3300004481\|Ga0069718_14631253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	576	Open in IMG/M
3300004481\|Ga0069718_15721040	Not Available	1067	Open in IMG/M
3300005832\|Ga0074469_10332304	All Organisms → cellular organisms → Bacteria	7605	Open in IMG/M
3300005832\|Ga0074469_10923508	Not Available	2523	Open in IMG/M
3300006224\|Ga0079037_101019940	Not Available	819	Open in IMG/M
3300006224\|Ga0079037_101504205	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300006224\|Ga0079037_101507604	Not Available	671	Open in IMG/M
3300007510\|Ga0105013_1070131	All Organisms → cellular organisms → Bacteria	2790	Open in IMG/M
3300007511\|Ga0105000_1060110	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3207	Open in IMG/M
3300007959\|Ga0079306_1000015	All Organisms → cellular organisms → Bacteria	331505	Open in IMG/M
3300007959\|Ga0079306_1096385	Not Available	798	Open in IMG/M
3300009034\|Ga0115863_1399115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1594	Open in IMG/M
3300009091\|Ga0102851_10125579	All Organisms → cellular organisms → Bacteria → Nitrospirae	2282	Open in IMG/M
3300009091\|Ga0102851_10187261	Not Available	1926	Open in IMG/M
3300009091\|Ga0102851_10618521	Not Available	1134	Open in IMG/M
3300009091\|Ga0102851_10665456	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1097	Open in IMG/M
3300009091\|Ga0102851_11689065	Not Available	711	Open in IMG/M
3300009111\|Ga0115026_10426859	Not Available	967	Open in IMG/M
3300009111\|Ga0115026_11517906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium HGW-Actinobacteria-7	558	Open in IMG/M
3300009111\|Ga0115026_11927695	Not Available	504	Open in IMG/M
3300009167\|Ga0113563_11379831	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300009506\|Ga0118657_12378673	Not Available	602	Open in IMG/M
3300010319\|Ga0136653_10091003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1480	Open in IMG/M
3300010413\|Ga0136851_10046861	All Organisms → cellular organisms → Bacteria	4729	Open in IMG/M
3300010413\|Ga0136851_10540738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium SM23_84	1158	Open in IMG/M
3300011118\|Ga0114922_10034518	Not Available	4483	Open in IMG/M
3300012931\|Ga0153915_10848932	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium GWC2_56_14	1060	Open in IMG/M
3300012931\|Ga0153915_10950200	All Organisms → cellular organisms → Bacteria → Proteobacteria	1000	Open in IMG/M
3300012931\|Ga0153915_11548172	Not Available	775	Open in IMG/M
3300012931\|Ga0153915_11640781	Not Available	752	Open in IMG/M
3300012931\|Ga0153915_13193182	Not Available	532	Open in IMG/M
3300012964\|Ga0153916_10215583	All Organisms → cellular organisms → Bacteria → Proteobacteria	1920	Open in IMG/M
3300012964\|Ga0153916_10224557	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300012964\|Ga0153916_10780426	Not Available	1035	Open in IMG/M
3300012964\|Ga0153916_10787172	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300012964\|Ga0153916_11328212	Not Available	796	Open in IMG/M
3300012964\|Ga0153916_11979322	Not Available	653	Open in IMG/M
3300012964\|Ga0153916_12585302	Not Available	572	Open in IMG/M
3300012964\|Ga0153916_12751256	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300012964\|Ga0153916_12875252	Not Available	543	Open in IMG/M
3300012964\|Ga0153916_13227295	Not Available	513	Open in IMG/M
3300014208\|Ga0172379_10926139	Not Available	516	Open in IMG/M
3300014315\|Ga0075350_1196291	Not Available	531	Open in IMG/M
3300017963\|Ga0180437_10479092	Not Available	920	Open in IMG/M
3300017966\|Ga0187776_10056144	Not Available	2250	Open in IMG/M
3300022221\|Ga0224506_10084940	Not Available	1539	Open in IMG/M
3300025599\|Ga0210074_1050358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1145	Open in IMG/M
3300025718\|Ga0209123_1018609	Not Available	3358	Open in IMG/M
3300025739\|Ga0209745_1109898	Not Available	908	Open in IMG/M
3300025836\|Ga0209748_1001025	All Organisms → cellular organisms → Bacteria	14068	Open in IMG/M
3300025836\|Ga0209748_1088615	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300025846\|Ga0209538_1018315	All Organisms → cellular organisms → Bacteria	3186	Open in IMG/M
3300026477\|Ga0256807_1007432	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300027265\|Ga0208789_1000023	All Organisms → cellular organisms → Bacteria	338269	Open in IMG/M
3300027877\|Ga0209293_10167439	All Organisms → cellular organisms → Bacteria → Nitrospirae	1057	Open in IMG/M
3300027877\|Ga0209293_10504776	Not Available	635	Open in IMG/M
3300027890\|Ga0209496_10112704	Not Available	1186	Open in IMG/M
3300027896\|Ga0209777_10200633	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300027899\|Ga0209668_10349087	Not Available	959	Open in IMG/M
3300027900\|Ga0209253_10195918	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300027917\|Ga0209536_100266154	Not Available	2147	Open in IMG/M
3300027917\|Ga0209536_100501379	Not Available	1515	Open in IMG/M
3300027917\|Ga0209536_100729715	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300027917\|Ga0209536_102938265	Not Available	551	Open in IMG/M
3300029826\|Ga0134619_1034565	Not Available	1132	Open in IMG/M
3300029827\|Ga0134606_10118852	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300031111\|Ga0272444_10365126	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300031111\|Ga0272444_11060012	Not Available	559	Open in IMG/M
3300031255\|Ga0315554_1249357	Not Available	570	Open in IMG/M
3300031257\|Ga0315555_1029699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	3048	Open in IMG/M
3300031539\|Ga0307380_10365410	Not Available	1313	Open in IMG/M
3300031551\|Ga0315548_1132000	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300031552\|Ga0315542_1010342	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4663	Open in IMG/M
3300031565\|Ga0307379_10115277	Not Available	2885	Open in IMG/M
3300031565\|Ga0307379_10474169	Not Available	1178	Open in IMG/M
3300031624\|Ga0315545_1125601	Not Available	1100	Open in IMG/M
3300031691\|Ga0316579_10114461	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_54_11	1295	Open in IMG/M
3300031727\|Ga0316576_10077291	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300031864\|Ga0315538_1096500	Not Available	698	Open in IMG/M
3300032018\|Ga0315272_10099006	All Organisms → cellular organisms → Bacteria → Nitrospirae	1347	Open in IMG/M
3300032168\|Ga0316593_10068191	All Organisms → cellular organisms → Bacteria → Proteobacteria	1227	Open in IMG/M
3300032251\|Ga0316198_10442689	Not Available	719	Open in IMG/M
3300032260\|Ga0316192_11125898	Not Available	524	Open in IMG/M
3300033408\|Ga0316605_10836671	Not Available	877	Open in IMG/M
3300033408\|Ga0316605_11833438	All Organisms → cellular organisms → Bacteria → Terrabacteria group	590	Open in IMG/M
3300033413\|Ga0316603_10225762	Not Available	1612	Open in IMG/M
3300033413\|Ga0316603_10499285	Not Available	1117	Open in IMG/M
3300033413\|Ga0316603_10609054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium HGW-Actinobacteria-7	1014	Open in IMG/M
3300033413\|Ga0316603_10963941	Not Available	805	Open in IMG/M
3300033413\|Ga0316603_11129217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium HGW-Actinobacteria-7	742	Open in IMG/M
3300033416\|Ga0316622_100590725	Not Available	1276	Open in IMG/M
3300033416\|Ga0316622_101008356	All Organisms → cellular organisms → Bacteria → Nitrospirae	972	Open in IMG/M
3300033416\|Ga0316622_101185837	Not Available	893	Open in IMG/M
3300033416\|Ga0316622_103385271	Not Available	503	Open in IMG/M
3300033419\|Ga0316601_100552330	Not Available	1113	Open in IMG/M
3300033419\|Ga0316601_101606122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium HGW-Actinobacteria-7	655	Open in IMG/M
3300033480\|Ga0316620_11149738	Not Available	760	Open in IMG/M
3300033482\|Ga0316627_101176809	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300033485\|Ga0316626_11067052	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300033485\|Ga0316626_11382305	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	632	Open in IMG/M
3300033486\|Ga0316624_11517326	Not Available	616	Open in IMG/M
3300033487\|Ga0316630_10483246	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_55_12	1010	Open in IMG/M
3300033493\|Ga0316631_10022612	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1823	Open in IMG/M
3300033493\|Ga0316631_10045564	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum	1396	Open in IMG/M
3300033513\|Ga0316628_100413921	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-10	1718	Open in IMG/M
3300033513\|Ga0316628_100664877	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1364	Open in IMG/M
3300033513\|Ga0316628_100888016	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1179	Open in IMG/M
3300033513\|Ga0316628_100903840	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1169	Open in IMG/M
3300033513\|Ga0316628_101475426	Not Available	906	Open in IMG/M
3300033521\|Ga0316616_100147518	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	2219	Open in IMG/M
3300033521\|Ga0316616_103108625	All Organisms → cellular organisms → Bacteria → Terrabacteria group	625	Open in IMG/M
3300033521\|Ga0316616_104965108	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.64%
Host-Associated	Host-Associated	2.52%
Engineered	Engineered	0.84%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	58.82%
Terrestrial	Environmental → Terrestrial	37.82%
Plants	Host-Associated → Plants	2.52%
Lab Enrichment	Engineered → Lab Enrichment	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	35.29%
Freshwater	Environmental → Aquatic → Freshwater	32.77%
Marine	Environmental → Aquatic → Marine	21.85%
Sediment	Environmental → Aquatic → Sediment	3.36%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.52%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.84%
Defined Media	Engineered → Lab Enrichment → Defined Media	0.84%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	26.05%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.01%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.72%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	6.72%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.88%
Coastal	Environmental → Aquatic → Marine → Coastal	5.04%
Oceanic	Environmental → Aquatic → Marine → Oceanic	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.36%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.52%
Clay	Environmental → Terrestrial → Soil → Clay	2.52%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.52%
Lake	Environmental → Aquatic → Freshwater → Lake	1.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.84%
Sediment	Environmental → Aquatic → Marine → Sediment	0.84%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.84%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	26.05%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	20.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.88%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.04%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	4.20%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	4.20%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.36%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.52%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.52%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.84%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.84%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.84%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.84%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.84%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.84%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	24.37%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	12.61%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	7.56%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.88%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	5.04%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	5.04%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	3.36%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.52%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.52%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.68%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	1.68%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.68%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.68%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.68%
Marine Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment	1.68%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.68%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	1.68%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	0.84%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.84%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.84%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.84%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	0.84%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.84%
Sediment, Intertidal	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal	0.84%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.84%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.84%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.84%
Wetland Sediment	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Wetland Sediment	0.84%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.84%
Hydrocarbon Resource Environments	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002179	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A	Environmental	Open in IMG/M
3300002821	Iso-alkanes.Hi.seq-Iso3T	Engineered	Open in IMG/M
3300003473	Fe-reducing enrichment culture from wetland. Sample 3 with anaerobic and aerobic cycling.	Environmental	Open in IMG/M
3300003988	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300007510	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300007511	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300007959	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanotroph_Enrichment_5	Environmental	Open in IMG/M
3300009034	Intertidal mud flat sediment archaeal communities from Garolim Bay, Chungcheongnam-do, Korea	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300010319	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaG	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014208	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Groundwater well OW334 metaG	Environmental	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300022221	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_8_1	Environmental	Open in IMG/M
3300025599	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025718	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-31A (SPAdes)	Environmental	Open in IMG/M
3300025739	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 (SPAdes)	Environmental	Open in IMG/M
3300025836	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)	Environmental	Open in IMG/M
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental	Open in IMG/M
3300026477	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR5	Environmental	Open in IMG/M
3300027265	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanotroph_Enrichment_5 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300029826	Marine sediment microbial communities from Jimmy Bay, New Orleans, USA to study impact of Deep Water Horizon explosion - N0247	Environmental	Open in IMG/M
3300029827	Marine sediment microbial communities from Barataria Bay, New Orleans, USA to study impact of Deep Water Horizon explosion - M1047	Environmental	Open in IMG/M
3300031111	Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Form-13	Environmental	Open in IMG/M
3300031255	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70	Environmental	Open in IMG/M
3300031257	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-80	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031551	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-110	Environmental	Open in IMG/M
3300031552	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-20	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031624	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-10	Environmental	Open in IMG/M
3300031691	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA	Host-Associated	Open in IMG/M
3300031727	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5	Host-Associated	Open in IMG/M
3300031864	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-230	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032168	Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032251	Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxic	Environmental	Open in IMG/M
3300032260	Coastal sediment microbial communities from Maine, United States - Merrow Island worm burrow	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1017178491	3300001213	Wetland	MSRSWTLRQGRVLVVEDASTASLVIVARDLRDRDDKVAALEE
JGIcombinedJ13530_1071398823	3300001213	Wetland	MLRTWKLKQGKILVIEDAATASLVIVARDLKSRAEKIAALEEVLRKMRK*
JGI24141J26756_10050051	3300002179	Arctic Peat Soil	VSSTWELRKGKVLVVEDAATASLVVVARDLKDRDDKIAALEEIVRRLRA*
JGI24141J26756_10195543	3300002179	Arctic Peat Soil	VAKGARAVSHTWKLREGSVLVVEDASTASLVVVAKDLKDRDEKIAVLEEVLRKLRA*
Iso3TCLC_100872615	3300002821	Hydrocarbon Resource Environments	MANTWKLRKGDVTVVEDASTASLVVVARDLKDREDKIAVLEEVARKLKS*
FeGluAir_105010382	3300003473	Wetland Sediment	MANTWEIRGGRVTVVEDASTASLVVVARDLKDRDSKIAVLEEIVRKMKG*
Ga0055475_102356242	3300003988	Natural And Restored Wetlands	MAKTWKLRKGQVTVVEDARTASLVVVARGLKNRGDKVAVIEEVLQRLQA*
Ga0069718_146312532	3300004481	Sediment	MSRTWKLRKGRVLVVEDASTASLVIVARDLTDKDDKLKVLQEVARKLSA*
Ga0069718_157210402	3300004481	Sediment	MSRTWRLRRGKVLVVEDASTASLVIVARDLKDRDDKLAVLEEIRRKLSA*
Ga0074469_103323042	3300005832	Sediment (Intertidal)	MSRKWTLRNGKVLVVEDATTASLVIVAKDLKDRADKIAAVQEVLRRLEA*
Ga0074469_109235085	3300005832	Sediment (Intertidal)	MSRTWKLRKGKVLVVEDANTASLVIVARDLKNLEDKISVLEEVLRKMQA*
Ga0079037_1010199402	3300006224	Freshwater Wetlands	GTMSCIWKLRKEKILVVEDASTASLVIVARDLKDREDKIAALEDVLRKMRSQTTAGDLDDGQP*
Ga0079037_1015042052	3300006224	Freshwater Wetlands	MLRTWKLRKGKILVIEDAATASLVIVVRDLQDRKDKIAALEEVLRKMRK*
Ga0079037_1015076041	3300006224	Freshwater Wetlands	MPHKWKLRKGNVLVVEDARTASLVIIAKDLKDRSDKIQILEEIIRKLQAGV*
Ga0105013_10701315	3300007510	Marine	MSRKWELREGKVTVVEDADTASLVIVARDLKNREDKIAVLEEVLQKMRK*
Ga0105000_10601106	3300007511	Marine	MSRKSELREGKVTVVEDADTASLVIVARDLKNREDKIAVLEEVLQKMRK*
Ga0079306_1000015147	3300007959	Deep Subsurface	MRTPEPAQRVRDMSSTWDLRKGKVKVVEDASTASLVVIARDLKDRDEKIAVLEEVVRRLKA*
Ga0079306_10963851	3300007959	Deep Subsurface	MANTWEIREGKVTVVEDASTASLVVIARDLKDRDEKVAVLEEIVRRMKG*
Ga0115863_13991153	3300009034	Sediment, Intertidal	MPRKWELRKGKVLVIEDASTASLVVVARDLKDRADKIAVIQEVLRTLQS*
Ga0102851_101255793	3300009091	Freshwater Wetlands	MSCIWKLRKEKILVVEDASTASLVIVARDLKDREDKIAALEDVLRKMRSQTTAGDLDDGQP*
Ga0102851_101872613	3300009091	Freshwater Wetlands	VSHTWELREGKVLVVEDANNASLVVVARDLKDRDDKIAVVEEILRKLRT*
Ga0102851_106185212	3300009091	Freshwater Wetlands	MSHTWELREGKVVVVEDANTAPLVVVARDLKDRNDKIAVLEEIIRKLRT*
Ga0102851_106654562	3300009091	Freshwater Wetlands	MPHKWKLRKVNVLVVEDARTASLVIIAKDLKDRSDKIQILEEIIRKLQAGV*
Ga0102851_116890652	3300009091	Freshwater Wetlands	MLRTWKLKQGKILVIEDAATASLVIVVRDLLDRKDKIAALEEVLRKMRR*
Ga0115026_104268592	3300009111	Wetland	MSQTWKLHKEKIVVVEDASTASLVIVARDLKDREDKIAALEEVLRKMRNQTTAGTALDDDEP*
Ga0115026_115179061	3300009111	Wetland	ALKGARTMSRTWGLRDGKVLVVEDANTAALVIVARDLKDRDDKVAALEEVLRKLRA*
Ga0115026_119276951	3300009111	Wetland	RIRDMPHKWKLRKGNVLVVEDARTASLVIIAKDLKDRSDKIQILEEIIRKLQAGV*
Ga0113563_113798312	3300009167	Freshwater Wetlands	MLRTWKLKQGKILVIEDAATASLVIVVRDLQDRKDKIAALEEVLRKMRK*
Ga0118657_123786731	3300009506	Mangrove Sediment	MPNKWELRNGNVMVVEDASTASLVIVAKELKDRADKVAVLQEVLAMLQA*
Ga0136653_100910033	3300010319	Anoxic Lake Water	MARTLKLRKGKVLVVEDASTASLVIVARDLKDKDEKLAVLDEVRRRLSS*
Ga0136851_100468612	3300010413	Mangrove Sediment	MKTFKRRIGTMSRTWKLRKGKIMVVEDADTASLVIVGRDLKDKEDKIAALEEVLRKIRG*
Ga0136851_105407382	3300010413	Mangrove Sediment	MSRTWTIRNGKVLVVEDATTASLVIVAKDLKDRADKVAAVREVLQKLES*
Ga0114922_100345184	3300011118	Deep Subsurface	VTRKWELRNGKVLVVEDANTASLVIVARDLKDKADKVAAVQEVLQRLQG*
Ga0153915_108489322	3300012931	Freshwater Wetlands	MSHTWELRDGKVLVVEDANTASLVVVARDLKDRDDKVAVLEEILRKLRA*
Ga0153915_109502001	3300012931	Freshwater Wetlands	MSHTWELREVKVLVVEDAITASLVVVARDLKDRDEKVAVLEEILRVL
Ga0153915_115481721	3300012931	Freshwater Wetlands	MSRTWELQKGKVLVVEDASTASFVIVARDLKDREEKIAVLEEVLRKIRSSTTAGASR*
Ga0153915_116407812	3300012931	Freshwater Wetlands	MSQTWELRNGQVLVVEDASTASLVVVARDLKDRNDKIAVLEEILRKLRT*
Ga0153915_131931821	3300012931	Freshwater Wetlands	WKLRKGKVLVVEDARTASLVIVARDLKDRDEKVAAVEEVLRKLRA*
Ga0153916_102155834	3300012964	Freshwater Wetlands	MSHTWELREGKVLVVEDAITASLVVVARDLKDRDEKVAVLEEILRVLRT*
Ga0153916_102245572	3300012964	Freshwater Wetlands	MARTWKLRNGKVLVVEDARTASLVIVARDLKDRDDKVAAVEEVLRKLQG*
Ga0153916_107804261	3300012964	Freshwater Wetlands	MASTWKLRKGKVLVVEDARTASLVIVARDLKDRDEKVAAVEEVLRKLRA*
Ga0153916_107871723	3300012964	Freshwater Wetlands	MSRTWKLRKGKELVIEDADTASLVIVARDLKNIEDKKAVLEEILHKMRS*
Ga0153916_113282122	3300012964	Freshwater Wetlands	VDASEAGSVQLRGVRAMARTWKLRKGKVLVVEDASTASLVIVARDLKDRNDKVAAVEEVLRKLQA*
Ga0153916_119793222	3300012964	Freshwater Wetlands	MLRTWKLKKGKILVIEDASSASLVIVARDLKGREDKVAAIEEVLRKLRK*
Ga0153916_125853021	3300012964	Freshwater Wetlands	KLRNGKVLVVEDARTASLVIVVRDLKDRDDKVAAVEEVLRKLQA*
Ga0153916_127512561	3300012964	Freshwater Wetlands	TQNVKLKKAEKRSIRKMSHSWKLKKGKILVVEDARTASLIIVARDLQNREDKIAALEEVLRKLRK*
Ga0153916_128752522	3300012964	Freshwater Wetlands	MSRTWKLRKGKVLVVEDARTASLVIVARDLKDQGDKVAVVEEVLRRLQA*
Ga0153916_132272951	3300012964	Freshwater Wetlands	MGKGAKDMSRTWKLREGRVLVVEDANTASLVIVARDLKDRNDKVAALEEVLKKLQS*
Ga0172379_109261392	3300014208	Groundwater	MSRTWRLKKGKVLVVEDASTASLVIVARDLKDRGEKIAVLQEVLRKLSA*
Ga0075350_11962912	3300014315	Natural And Restored Wetlands	VEDARTASLVVVARGLKNRGDKVAVIEEVLQRLQA*
Ga0180437_104790921	3300017963	Hypersaline Lake Sediment	MSREWKLRKGKVLVVEDANTASLVIVARDLKNREDKIAALEEVLRKMRA
Ga0187776_100561441	3300017966	Tropical Peatland	VKEVGAVSHTWELTEGKVLVVEDANTASLVVVARDLKDRDDKIAVLEEILLKLRT
Ga0224506_100849401	3300022221	Sediment	MAHTTELQDGKILIVEDATTASLVIVARDLKGRDAKIAALEEVLRMMRSSEGEGIEL
Ga0210074_10503581	3300025599	Natural And Restored Wetlands	MAKTWKLRKGQVTVVEDARTASLVVVARGLKNRGDKVAVIEEVLQRLQA
Ga0209123_10186094	3300025718	Arctic Peat Soil	VAKGARAVSHTWKLREGSVLVVEDASTASLIVVAKDLKDRDEKIAVLEEVLRKLRA
Ga0209745_11098982	3300025739	Arctic Peat Soil	MSRRWELREGKVLVIEDANTASLAVVARDLKGRDDKVAALEDVLRKLRY
Ga0209748_100102511	3300025836	Arctic Peat Soil	VSSTWELRKGKVLVVEDAATASLVVVARDLKDRDDKIAALEEIVRRLRA
Ga0209748_10886153	3300025836	Arctic Peat Soil	VSHTWKLREGSVLVVEDASTASLVVVAKDLKDRDEKIAVLEEVLRKLRA
Ga0209538_10183151	3300025846	Arctic Peat Soil	VAKGARAVSHTWKLREGSVLVVEDASTASLVVVAKDLKDRDEKIAVLEEVLRKLRA
Ga0256807_10074321	3300026477	Sediment	MSRTWKLLKGKILVIEDAATASLVIVARDLKERKDKIAVLEEILRRMSK
Ga0208789_1000023202	3300027265	Deep Subsurface	MSSTWDLRKGKVKVVEDASTASLVVIARDLKDRDEKIAVLEEVVRRLKA
Ga0209293_101674391	3300027877	Wetland	MSLFRRKEGGTVSHTRELREGKVLMVEDANTASLVVVARDLKDRDDKVAVLEEILHVLRT
Ga0209293_105047761	3300027877	Wetland	MSQTWKLHKEKIVVVEDASTASLVIVARDLKDREDKIAALEEVLRKMRNQTTAGTALDDDEP
Ga0209496_101127041	3300027890	Wetland	MSHTWELREGKVVVVEDANTAPLVVVARDLKDRNDKIAVLEEIIRKLRT
Ga0209777_102006333	3300027896	Freshwater Lake Sediment	MSRTWKLRNGEVLVVEDASTASLVVVAKGLKDRDDKIAVLEEVLRKLRT
Ga0209668_103490872	3300027899	Freshwater Lake Sediment	MASTWRLRKGKVLVVEDARTASLVIVARDLKDRNDKVAAVEEVLRKLKA
Ga0209253_101959181	3300027900	Freshwater Lake Sediment	MSRTWKLREGKVLVVEDASTASLVIVARDLTDKDDKVAVLEEVLRKLSG
Ga0209536_1002661542	3300027917	Marine Sediment	MSHKWELRNGRLVVIEDATTASLVIVARDLKNRADKIAALEEVLQELRA
Ga0209536_1005013791	3300027917	Marine Sediment	MSSKWELRNGKVMVVEDASTASLVIIARDLKNKTEKVAVLQEVLQKIKA
Ga0209536_1007297152	3300027917	Marine Sediment	MTRRWELRKGKVLVVEDASTASLVIVARDLKDRADKVAALQEVLQKLQD
Ga0209536_1029382652	3300027917	Marine Sediment	MSRTWKLMKGKVLVVEDASTASLVIVARDLKKQEEKIAALEEVLRKMRK
Ga0134619_10345652	3300029826	Marine Sediment	MSKTWELQKGNILVVEDANTASLVIVVKDLKKKEDKIVALEEIIQKMRND
Ga0134606_101188521	3300029827	Marine Sediment	MSKTWELQKGNILVVEDANTASLVIVVKDLKKKEDKIVALEEIIKKMRND
Ga0272444_103651261	3300031111	Marine Sediment	MARTWKLRKGNVIVVEDANTASLVIVAKDLKDRTDKVSALEEVIHKLRS
Ga0272444_110600121	3300031111	Marine Sediment	THTWELQKGKIKVVEDADTASLVIVAREHKSRKDKIAALEEVLRTMKSSLTAG
Ga0315554_12493571	3300031255	Salt Marsh Sediment	TWKLRKGKVLVVEDASTASLVIVAKDLKDRIDKVSALEEVIHKLQS
Ga0315555_10296994	3300031257	Salt Marsh Sediment	MANTWSLSKGKILVVEDASTASLVIVARDLKRRDDKIAALEQVLQKMRAKA
Ga0307380_103654102	3300031539	Soil	MSRTWKLREGKVLVVEDASTASLVIGGRDLTDKDDKVAVLKEVLRKLSG
Ga0315548_11320001	3300031551	Salt Marsh Sediment	VTRKWELRKGKVLVVEDANTASLVIVARDLKDKAEKVAAVQEVLQRLQG
Ga0315542_10103429	3300031552	Salt Marsh Sediment	MSSTWKLRKGKVLVVEDASTASLVIVARDLKNREDKIAALEEVLLKMRR
Ga0307379_101152774	3300031565	Soil	VRVGARAMSRTWKLREGKVLVVEDASTASLVIGGRDLTDKDDKVAVLKEVLRKLSG
Ga0307379_104741691	3300031565	Soil	MSRTWKLREGKVLVVEDASTASLVIGGRDLTDKDDKV
Ga0315545_11256012	3300031624	Salt Marsh Sediment	VTRKWELREGKVLVVEDANTASLVIVARDLKNKADKVAAVQEVLQRLRG
Ga0316579_101144613	3300031691	Rhizosphere	MSRTWKLMKGKVLVVEDASTASLVIVARDLKKQEEKIAALEEVLRKMRR
Ga0316576_100772913	3300031727	Rhizosphere	MAKTWKLRQGQVTVVEDARTASLVVVARGLKNRGEKVAVIEEVLQRLRA
Ga0315538_10965001	3300031864	Salt Marsh Sediment	MSHKWTLRKGKVLVVEDASTASLVIIARDLKDRADKIAAVQEVLRKLQT
Ga0315272_100990062	3300032018	Sediment	MSHTWELREGKVLVVEDAKTASLVVVARDLKDRNDKVAVLEEILRRLQV
Ga0316593_100681913	3300032168	Rhizosphere	GAVAQTWELHDGRILVVEDASTASLVIIAKDLKTREDKIAALEDVLKKLQNK
Ga0316198_104426891	3300032251	Sediment	MAKTWTLRKGQVTVVEDARTASLVIVARDLKDGREKVAALEEVLRRLQA
Ga0316192_111258981	3300032260	Worm Burrow	MAKTWQLMKGQVTVVEDARTASLVIVARDLKNRREKVAALEEVLRQLQG
Ga0316605_108366712	3300033408	Soil	ARTWKLRGGTVLVVEDASTASLVVVARGLESKDEKVAVLEEVLRTLTS
Ga0316605_118334381	3300033408	Soil	MSRTWELREGKVLVIEDANTASLVVVARDLEDLDDKVAVLEEVLRKL
Ga0316603_102257622	3300033413	Soil	MSRTWKLRGGTVLVVEDASTASLVVVARGLESKDEKVAVLEEVLRKLTS
Ga0316603_104992852	3300033413	Soil	MAQTWELRNGKVLVVEDASTASLVVVARDLNDRDDKIAALEEVLRKLKS
Ga0316603_106090542	3300033413	Soil	MSRTWGLRDGKVLVVEDANTAALVIVARDLKDRDDKVAALEEVLRKLRA
Ga0316603_109639412	3300033413	Soil	MSRTWELRDGKVLVVEDANTASLVVVARDLKDRGDKVAVLEEVLHRLKK
Ga0316603_111292172	3300033413	Soil	MANTWEIREGKVTVVEDASTASLVVVARDLKDRDAKIAVLEEIVRKMKG
Ga0316622_1005907251	3300033416	Soil	MSQTWKLHKEKIVVVEDASTASLVIVARDLKDREDKIAALEEVLRKMRNQTTAGT
Ga0316622_1010083561	3300033416	Soil	KEKIVVVEDASTASLVIVARDLKDREDKIAALEEVLRKMRNQTTAGTALDDDEP
Ga0316622_1011858371	3300033416	Soil	MPQTLELRNGKVLVVEDAKTASLVIVARDLESRDDKIEVLEEVLRTLRK
Ga0316622_1033852711	3300033416	Soil	MSRTWKLREGKVLIVEDASTASLVIVARDLKDRDDKVAVLEEILRKLSA
Ga0316601_1005523302	3300033419	Soil	MSRTWKLRGGTVLVVEDASTASLVVVARGLESKDEKVAVLEEVLRTLTS
Ga0316601_1016061222	3300033419	Soil	MSRTWGLRDGKVLVVEDANTASLVVVARDLKDRDDKVAALEEVLRKLRA
Ga0316620_111497381	3300033480	Soil	MSHTWELREGKVLVVEDANTASLVVVARDLKDRNDKVAVLEEILRRLQA
Ga0316627_1011768092	3300033482	Soil	MSRTWTLRGAKVLVVEDASTASLVIVARDLKDRDDKIAALEEVLSQLRASARGR
Ga0316626_110670522	3300033485	Soil	MLRTWKLKQGKILVIEDAATASLVIVVRDLLDRKDKIAALEEVLRKMRR
Ga0316626_113823052	3300033485	Soil	MLRTWKLRKGKILVIEDAATASLVIVVRDLQDRKDKIAALEEVLRKMRK
Ga0316624_115173262	3300033486	Soil	VSHTWELREGKVLVVEDANTASLVVVARDLKDRDDKVAVLEEILRKLRT
Ga0316630_104832462	3300033487	Soil	VSHTRELREGKVLMVEDANTASLVVVARDLKDRDDKVAVLEEILHVLRT
Ga0316631_100226124	3300033493	Soil	MLLSRRKEVGTVSHTRELGEGKVLMVEDANTASLVVVARDLKDRDEKVAVLEEILRVLRT
Ga0316631_100455642	3300033493	Soil	LAHIRCEGGGAMSHTWELREGKVVVVEDANTAPLVVVARDLKDRNDKIAVLEEIIRKLRT
Ga0316628_1004139212	3300033513	Soil	MSNTWELRDGKVLVVEDANTASLVVVARDLKDRDDKVAVLEEILRKLRT
Ga0316628_1006648771	3300033513	Soil	MSRTWKLRNGEVLVVEDASTASLVVVAKGLKDRNDKIAVLEEVLRRLRT
Ga0316628_1008880163	3300033513	Soil	MSHTWELREGKVLVVEDANTASLVVVARDLKDRNDKVAVLEEILRRLRA
Ga0316628_1009038402	3300033513	Soil	VSHTWELREGKVLVVEDANTASLVVVARDLKDRDEKVAVLEEILRVLRT
Ga0316628_1014754261	3300033513	Soil	MSHTWELREGKVLVVEDANTASLVVVARDLKDRDEKIAVLEEILSVLRT
Ga0316616_1001475181	3300033521	Soil	MPHKWKLRKVNVLVVEDARTASLVIIAKDLKDRSDKIQILEEIIRKLQAGV
Ga0316616_1031086252	3300033521	Soil	MSRTWNLRQGKVLVVEDADTASLVVVARDLKDRDDKVAVLEEILRKLRA
Ga0316616_1049651082	3300033521	Soil	MSRTWKLREGKVLVVEDASTASLVIVARDLTDEDDKVAVLEEVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075038

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences