Metagenome / Metatranscriptome Family F075034

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075034
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	68 residues
Representative Sequence	IACRSCGAPTASSDGICRDCADAMREERAEALGERCRVHRVRYVEDLPVSVLEEMQAERGRC
Number of Associated Samples	71
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	23.53 %
% of genes near scaffold ends (potentially truncated)	75.63 %
% of genes from short scaffolds (< 2000 bps)	91.60 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.588 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (23.529 % of family members)
Environment Ontology (ENVO)	Unclassified (94.958 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline) (47.899 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.11% β-sheet: 2.22% Coil/Unstructured: 56.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF03837	RecT	5.88
PF02195	ParBc	5.04
PF08281	Sigma70_r4_2	1.68
PF12728	HTH_17	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	5.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
All Organisms	root	All Organisms	29.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
cellular organisms	root	All Organisms → cellular organisms	27.73 %
Viruses	superkingdom	All Organisms → Viruses	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	15.13 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	12.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	12.61 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	10.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.84 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.84 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	12.61 %
unclassified Synergistota	no rank	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota	10.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.84 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	12.61 %
Synergistetes bacterium ADurb.BinA166	species	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	10.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.84 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.84 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	12.61 %
Synergistetes bacterium ADurb.BinA166	species	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	10.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.84 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.84 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Synergistetes bacterium ADurb.BinA166	species	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	10.92 %
unclassified Methanomicrobiales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales	10.08 %
Methanoregulaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	2.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.84 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.84 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Synergistetes bacterium ADurb.BinA166	species	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	10.92 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	10.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %
unclassified Methanoregulaceae	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae	0.84 %
unclassified Bacteroidales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales	0.84 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.84 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Synergistetes bacterium ADurb.BinA166	species	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	10.92 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	10.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %
Bacteroidales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	0.84 %
Methanoregulaceae archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon	0.84 %
unclassified Clostridium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium	0.84 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Synergistetes bacterium ADurb.BinA166	species	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	10.92 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	10.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %
Clostridium sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp.	0.84 %
Bacteroidales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	0.84 %
Methanoregulaceae archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon	0.84 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111018\|Meso_c1208495	Not Available	506	Open in IMG/M
2209111018\|Meso_c463859	Not Available	502	Open in IMG/M
3300001975\|Draft_10463859	Not Available	506	Open in IMG/M
3300001975\|Draft_11208495	Not Available	508	Open in IMG/M
3300002163\|JGI24707J26582_10097096	Not Available	897	Open in IMG/M
3300002164\|JGI24708J26588_10071099	Not Available	1154	Open in IMG/M
3300002164\|JGI24708J26588_10088182	Not Available	965	Open in IMG/M
3300002164\|JGI24708J26588_10088941	Not Available	959	Open in IMG/M
3300002166\|JGI24713J26584_10049571	Not Available	1023	Open in IMG/M
3300002167\|JGI24714J26587_10067393	Not Available	831	Open in IMG/M
3300002168\|JGI24712J26585_10091159	All Organisms → Viruses → Predicted Viral	1060	Open in IMG/M
3300002168\|JGI24712J26585_10207684	Not Available	540	Open in IMG/M
3300002168\|JGI24712J26585_10223676	Not Available	511	Open in IMG/M
3300002173\|JGI24709J26583_10064144	Not Available	1362	Open in IMG/M
3300002173\|JGI24709J26583_10106757	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	890	Open in IMG/M
3300002173\|JGI24709J26583_10190803	Not Available	560	Open in IMG/M
3300002173\|JGI24709J26583_10193973	Not Available	553	Open in IMG/M
3300002174\|JGI24710J26742_10225955	Not Available	523	Open in IMG/M
3300002377\|JGI24500J29687_10040544	Not Available	857	Open in IMG/M
3300002392\|JGI24503J29689_10089140	Not Available	626	Open in IMG/M
3300002898\|draft_10357777	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300003306\|Ga0004534J46558_1015124	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	1026	Open in IMG/M
3300003306\|Ga0004534J46558_1017089	Not Available	915	Open in IMG/M
3300003306\|Ga0004534J46558_1029893	Not Available	543	Open in IMG/M
3300003306\|Ga0004534J46558_1030079	Not Available	686	Open in IMG/M
3300005835\|Ga0078910_102306	All Organisms → cellular organisms → Bacteria	6824	Open in IMG/M
3300005835\|Ga0078910_102561	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	3395	Open in IMG/M
3300005835\|Ga0078910_103415	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1338	Open in IMG/M
3300005835\|Ga0078910_112015	Not Available	1070	Open in IMG/M
3300005835\|Ga0078910_129047	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	2535	Open in IMG/M
3300006225\|Ga0082206_102150	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	3902	Open in IMG/M
3300006225\|Ga0082206_124833	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	933	Open in IMG/M
3300006386\|Ga0079068_1413355	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	1771	Open in IMG/M
3300006596\|Ga0079074_1011978	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	1042	Open in IMG/M
3300006805\|Ga0075464_10849569	Not Available	569	Open in IMG/M
3300006805\|Ga0075464_11051599	Not Available	512	Open in IMG/M
3300009121\|Ga0118671_1094100	Not Available	792	Open in IMG/M
3300009121\|Ga0118671_1153563	Not Available	567	Open in IMG/M
3300009122\|Ga0118674_1030634	Not Available	1389	Open in IMG/M
3300009122\|Ga0118674_1066365	Not Available	837	Open in IMG/M
3300009122\|Ga0118674_1077438	Not Available	758	Open in IMG/M
3300009360\|Ga0118672_1029047	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1678	Open in IMG/M
3300009360\|Ga0118672_1079351	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	881	Open in IMG/M
3300009362\|Ga0118673_1070698	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	1035	Open in IMG/M
3300009362\|Ga0118673_1076742	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	978	Open in IMG/M
3300009362\|Ga0118673_1084070	Not Available	918	Open in IMG/M
3300009542\|Ga0116234_1215053	Not Available	797	Open in IMG/M
3300009607\|Ga0123327_1047459	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	1785	Open in IMG/M
3300009607\|Ga0123327_1133290	Not Available	857	Open in IMG/M
3300009607\|Ga0123327_1201497	Not Available	649	Open in IMG/M
3300009642\|Ga0123331_1137632	Not Available	758	Open in IMG/M
3300009642\|Ga0123331_1163147	Not Available	680	Open in IMG/M
3300009647\|Ga0123326_1039402	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	1831	Open in IMG/M
3300009647\|Ga0123326_1073223	Not Available	1199	Open in IMG/M
3300009647\|Ga0123326_1088052	Not Available	1058	Open in IMG/M
3300009647\|Ga0123326_1124168	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	838	Open in IMG/M
3300009656\|Ga0123329_1178330	Not Available	776	Open in IMG/M
3300009656\|Ga0123329_1262677	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	606	Open in IMG/M
3300009659\|Ga0123328_1280732	Not Available	612	Open in IMG/M
3300009659\|Ga0123328_1305474	Not Available	581	Open in IMG/M
3300009666\|Ga0116182_1184607	Not Available	941	Open in IMG/M
3300009668\|Ga0116180_1140507	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	984	Open in IMG/M
3300009668\|Ga0116180_1199128	Not Available	781	Open in IMG/M
3300009670\|Ga0116183_1145471	Not Available	1172	Open in IMG/M
3300009670\|Ga0116183_1242504	Not Available	812	Open in IMG/M
3300009671\|Ga0123334_1138850	Not Available	1176	Open in IMG/M
3300009674\|Ga0116173_1292037	Not Available	730	Open in IMG/M
3300009675\|Ga0116149_1106628	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1439	Open in IMG/M
3300009680\|Ga0123335_1453754	Not Available	581	Open in IMG/M
3300009681\|Ga0116174_10064702	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	2088	Open in IMG/M
3300009682\|Ga0116172_10433305	Not Available	614	Open in IMG/M
3300009687\|Ga0116144_10118665	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1483	Open in IMG/M
3300009687\|Ga0116144_10623854	Not Available	522	Open in IMG/M
3300009696\|Ga0116177_10094741	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	1742	Open in IMG/M
3300009715\|Ga0116160_1234746	Not Available	704	Open in IMG/M
3300009720\|Ga0116159_1251788	Not Available	698	Open in IMG/M
3300009767\|Ga0116161_1257724	Not Available	718	Open in IMG/M
3300009770\|Ga0123332_1354268	Not Available	585	Open in IMG/M
3300009773\|Ga0123333_10452453	Not Available	517	Open in IMG/M
3300009781\|Ga0116178_10203422	Not Available	1009	Open in IMG/M
3300010340\|Ga0116250_10239398	Not Available	1096	Open in IMG/M
3300010344\|Ga0116243_10408118	Not Available	843	Open in IMG/M
3300010346\|Ga0116239_10852847	Not Available	569	Open in IMG/M
3300010365\|Ga0116251_10638107	Not Available	556	Open in IMG/M
3300014203\|Ga0172378_10466529	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	946	Open in IMG/M
3300014203\|Ga0172378_10582210	Not Available	826	Open in IMG/M
3300014203\|Ga0172378_10909858	Not Available	632	Open in IMG/M
3300014204\|Ga0172381_10334549	Not Available	1195	Open in IMG/M
3300014204\|Ga0172381_11017300	Not Available	611	Open in IMG/M
3300014204\|Ga0172381_11324979	Not Available	521	Open in IMG/M
3300014206\|Ga0172377_10441436	Not Available	1071	Open in IMG/M
3300014206\|Ga0172377_10445129	All Organisms → Viruses → Predicted Viral	1066	Open in IMG/M
3300014206\|Ga0172377_11388796	Not Available	528	Open in IMG/M
3300014206\|Ga0172377_11522742	Not Available	500	Open in IMG/M
3300015214\|Ga0172382_10151038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp.	2004	Open in IMG/M
3300015214\|Ga0172382_10289100	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	1293	Open in IMG/M
3300015214\|Ga0172382_10816028	Not Available	637	Open in IMG/M
3300015214\|Ga0172382_10891056	Not Available	600	Open in IMG/M
3300025682\|Ga0209718_1034922	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	2144	Open in IMG/M
3300025713\|Ga0208195_1172811	Not Available	690	Open in IMG/M
3300025772\|Ga0208939_1157062	Not Available	812	Open in IMG/M
3300025877\|Ga0208460_10163201	Not Available	880	Open in IMG/M
3300026194\|Ga0209509_1052925	Not Available	1057	Open in IMG/M
3300026194\|Ga0209509_1074039	Not Available	832	Open in IMG/M
3300026195\|Ga0209312_1052793	Not Available	1187	Open in IMG/M
3300026195\|Ga0209312_1081494	Not Available	865	Open in IMG/M
3300026250\|Ga0209612_1077500	Not Available	981	Open in IMG/M
3300026255\|Ga0209613_1025242	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	2097	Open in IMG/M
3300026290\|Ga0209510_1081689	Not Available	1220	Open in IMG/M
3300027510\|Ga0209537_1026292	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	2412	Open in IMG/M
3300027510\|Ga0209537_1086832	Not Available	773	Open in IMG/M
3300028602\|Ga0265294_10569628	Not Available	672	Open in IMG/M
3300028603\|Ga0265293_10460743	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	745	Open in IMG/M
3300028757\|Ga0307350_116795	Not Available	848	Open in IMG/M
3300029673\|Ga0307355_114017	Not Available	928	Open in IMG/M
3300029822\|Ga0134854_1057247	Not Available	822	Open in IMG/M
3300033166\|Ga0334900_1115440	Not Available	556	Open in IMG/M
3300033170\|Ga0334884_1059559	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon	1482	Open in IMG/M
3300034686\|Ga0334891_013016	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	4401	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	94.96%
Environmental	Environmental	5.04%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	31.93%
Bioreactor	Engineered → Bioreactor	30.25%
Biotransformation	Engineered → Biotransformation	18.49%
Solid Waste	Engineered → Solid Waste	13.45%
Aquatic	Environmental → Aquatic	5.04%
Unclassified	Engineered → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	31.93%
Anaerobic	Engineered → Bioreactor → Anaerobic	23.53%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	18.49%
Landfill	Engineered → Solid Waste → Landfill	11.76%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	5.88%
Freshwater	Environmental → Aquatic → Freshwater	3.36%
Marine	Environmental → Aquatic → Marine	1.68%
Grass	Engineered → Solid Waste → Grass	1.68%
Unclassified	Engineered → Unclassified → Unclassified	0.84%
Unclassified	Engineered → Bioreactor → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	31.93%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	23.53%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	18.49%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	11.76%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	5.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.36%
Coastal	Environmental → Aquatic → Marine → Coastal	1.68%
Composting	Engineered → Solid Waste → Grass → Composting	1.68%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	0.84%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	31.93%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	23.53%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	18.49%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	11.76%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.36%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.68%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	1.68%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	0.84%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	23.53%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	21.01%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	18.49%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	10.08%
Anaerobic Wastewater Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge	8.40%
Biogas Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Biogas Reactor	4.20%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	3.36%
Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Sludge	2.52%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.68%
Solid Waste From Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Solid Waste From Bioreactor	1.68%
Biogas Fermenter	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Biogas Fermenter	1.68%
Mixed Substrate Biogas Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Mixed Substrate Biogas Reactor	1.68%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	0.84%
Fermentation Pit Mud	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111018	Mesophilic bioreactor microbial communities at Bielefeld, Germany	Engineered	Open in IMG/M
3300001975	Biogas fermenter microbial communities from the University of Hamburg, Germany	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002164	Biogas fermentation microbial communities from Germany - Plant 1 DNA2	Engineered	Open in IMG/M
3300002166	Biogas fermentation microbial communities from Germany - Plant 4 DNA1	Engineered	Open in IMG/M
3300002167	Biogas fermentation microbial communities from Germany - Plant 4 DNA2	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002174	Biogas fermentation microbial communities from Germany - Plant 2 DNA2	Engineered	Open in IMG/M
3300002377	Biogas fermentation microbial communities from Germany - Plant 2 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002392	Biogas fermentation microbial communities from Germany - Plant 3 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300003306	Biogas fermentation microbial communities from Germany - Plant 1 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300005835	Biogas reactor microbial communities from SLU, Alnarp, Sweden - PacBio 1 to 3 kb reads	Engineered	Open in IMG/M
3300006225	Biogas reactor microbial communities from SLU, Alnarp, Sweden - PacBio 99 accuracy	Engineered	Open in IMG/M
3300006386	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Oil_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006596	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Leu_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009121	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.A IDBA	Engineered	Open in IMG/M
3300009122	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C13.But.B IBDA	Engineered	Open in IMG/M
3300009360	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.B IBDA	Engineered	Open in IMG/M
3300009362	Syntrophic microbial communities from biogas reactors - R1.C13.But.A IBDA	Engineered	Open in IMG/M
3300009542	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A SIP RNA (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300009607	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA	Engineered	Open in IMG/M
3300009642	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA	Engineered	Open in IMG/M
3300009647	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA	Engineered	Open in IMG/M
3300009656	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA	Engineered	Open in IMG/M
3300009659	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA	Engineered	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009668	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG	Engineered	Open in IMG/M
3300009670	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG	Engineered	Open in IMG/M
3300009671	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA	Engineered	Open in IMG/M
3300009674	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG	Engineered	Open in IMG/M
3300009675	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG	Engineered	Open in IMG/M
3300009680	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA	Engineered	Open in IMG/M
3300009681	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG	Engineered	Open in IMG/M
3300009682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC083_MetaG	Engineered	Open in IMG/M
3300009687	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG	Engineered	Open in IMG/M
3300009696	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG	Engineered	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300009720	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG	Engineered	Open in IMG/M
3300009767	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS3_MetaG	Engineered	Open in IMG/M
3300009770	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C12 SIP DNA	Engineered	Open in IMG/M
3300009773	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C12 SIP DNA	Engineered	Open in IMG/M
3300009781	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC12_MetaG	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010344	AD_JPASca	Engineered	Open in IMG/M
3300010346	AD_USMOca	Engineered	Open in IMG/M
3300010365	AD_USDIca	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300015214	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaG	Engineered	Open in IMG/M
3300025682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025713	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025772	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC12_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025877	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026194	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026195	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026250	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026255	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026290	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300028757	Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_UR_Phe1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300029673	Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_UR_Trp2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300029822	Liquor fermentation pit mud microbial communities from Chengdu, China - Meta-7-3-30-T	Engineered	Open in IMG/M
3300033166	Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands - Granular Sludge_31_08-R3	Engineered	Open in IMG/M
3300033170	Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands - Granular Sludge_12_05 R1	Engineered	Open in IMG/M
3300034686	Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands - Granular Sludge_15_08-R1	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Meso_12084951	2209111018	Solid Waste From Bioreactor	PGRVDRTTIYCHSCGCETTADRICPACAEARRAERADALAERCRVHRVRYVEDLPVSALEEMQAEWGRC
Meso_4638591	2209111018	Solid Waste From Bioreactor	GTFDRIIVAAAEHAAREAGLPGRADRMIACRSCGAPTTSNDGICRDCADAMREERAEALGERCRVHRVRYVEDLPVSVLEEMQVEWGRR
Draft_104638591	3300001975	Biogas Fermenter	SEGTFDRIIVAAAEHAAREAGLPGRADRMIACRSCGAPTTSNDGICRDCADAMREERAEALGERCRVHRVRYVEDLPVSVLEEMQVEWGRR*
Draft_112084951	3300001975	Biogas Fermenter	QPGRVDRTTIYCHSCGCETTADRICPACAEARRAERADALAERCRVHRVRYVEDLPVSALEEMQAEWGRC*
JGI24707J26582_100970962	3300002163	Biogas Fermentantion	TASSDGICRDCADAIREERAAALGERCRIHRVRYVEDLPVSALEEMQAEWGRC*
JGI24708J26588_100710994	3300002164	Biogas Fermentantion	GRADRMIACRSCGAPTTSSDGICPDCAEALRVERAAALDERCRVHRVQYVDDLPVSVLDEMQAEWRRC*
JGI24708J26588_100881821	3300002164	Biogas Fermentantion	MIACRSCGAPTANCDGICRDCADAMREERAAALGERCRVHRVRYVEDLPVSALEEMQAEWGRC*
JGI24708J26588_100889411	3300002164	Biogas Fermentantion	GRADRMIACRSCGAPTASSDGICRDCADAMREERAAALGERCRVHRVRRVEDLPVSVLEEMQAEWGRC*
JGI24713J26584_100495713	3300002166	Biogas Fermentantion	CRSCGAPTSSSDGICRDCAYAMCEERAAALGERCHIRRARYVEDLPVSALEVMQAERGWI
JGI24714J26587_100673933	3300002167	Biogas Fermentantion	CRSCGAPTASSDGICRDCAYAMCAERSEALSARCRVHRVRYVEDLPVSALEEMQAERGWC
JGI24712J26585_100911594	3300002168	Biogas Fermentantion	RADRMIACRSCGAPTTSSDGICRDCADAMREERAEALGERCRIHRVRYVEDLPVSALEEMQAEWGRC*
JGI24712J26585_102076843	3300002168	Biogas Fermentantion	GRILVAAAEHAAREAGLPGRADRMIACRSCGAPTASSDGICPDCAEALRAERAEALGERCRIHRVRYVEDLPVSALEEMQVEWGRC*
JGI24712J26585_102236761	3300002168	Biogas Fermentantion	GAPTASSDGICRDCADAMREERADVLEERCRVHRVRYVEDLPVSALEEMXXEWGRX*
JGI24709J26583_100641442	3300002173	Biogas Fermentantion	TASSDGICRDCADAMREERAEALGERCRVHRVRYVDDLPVSALEEMQVEWRRC*
JGI24709J26583_101067573	3300002173	Biogas Fermentantion	TSSDGICRDCADAMREERAEALGERCRIHRVRYVEDLPVSALEEMQAEWGRC*
JGI24709J26583_101908031	3300002173	Biogas Fermentantion	REAGLPGRADRMIACRSCGAPTASSDGICRDCADAMREERAAALSEMCRIHRVRHVEDLPVSVLEEMQAERGRC*
JGI24709J26583_101939732	3300002173	Biogas Fermentantion	MIACRSCGAPTASSDGICPDCAEALRAERAEALAERCRIHRVRYVEDLPVSALEEMXVEWGRC*
JGI24710J26742_102259551	3300002174	Biogas Fermentantion	ADRMIACRSCGAPTASSDGICRDCADAMREERAAALSEMCRIHRVRHVEDLPVSVLEEMQAERGRC*
JGI24500J29687_100405441	3300002377	Biogas Fermentantion	GAPTTSSGGICPDCTEALRAERAAALDERCRVHRVRYVDDLPVSVLQEMQAEWGRS*
JGI24503J29689_100891401	3300002392	Biogas Fermentantion	SSDGICRDCADAMREERAAALGERCRVHRVRYVEDLPVSALEEMQAEWGRC*
draft_103577771	3300002898	Biogas Fermenter	FDRIIVAAAEHAAREAGLPGRADRMITCRSCGTPTANCDGVCRDCADAMREERAAALGERCRIHRARYVEDLPVSALEEMQAEWGRC*
Ga0004534J46558_10151241	3300003306	Biogas Fermentantion	VAAAEHAAREAGLPGRADRMIACRSCGAPTASSDGICRDCADAMREERAEALGERCRIHRVRYVDDLPVSVLQEMQAEWGRC*
Ga0004534J46558_10170891	3300003306	Biogas Fermentantion	SCGAPTANCDGICRDCADAMREERAAALGERCRVHRVRYVEDLPVSALEEMQAERGRC*
Ga0004534J46558_10298931	3300003306	Biogas Fermentantion	RMITCRSCGAPTANYDGICRDCAEALRVERAAALDERCRIHQVRYVEDLPVSALEEMQAEWGRC*
Ga0004534J46558_10300791	3300003306	Biogas Fermentantion	ACRSCGAPTASSDGICRDCADAMREERAAALSEMCRIHRVRHVEDLPVSVLEEMQAERGRC*
Ga0078910_10230621	3300005835	Biogas Reactor	TASSDGICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALQEMQAEWGRSQ*
Ga0078910_1025614	3300005835	Biogas Reactor	MIACRSCGAPTASSDGICRDCADAMREERXEALXXRCRIHRVRYVEDLPVSALQEMQAEWGRC*
Ga0078910_1034153	3300005835	Biogas Reactor	MIACRSCGAPTASSDGICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALEEMQAEWGRC*
Ga0078910_1120151	3300005835	Biogas Reactor	MSAPAPPSANREREPTLRDGTFDYIIVAAAEHAAREAGLPGRADRMIACRSCGAPTASSDGICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALQEMQAEWGRC*
Ga0078910_1290477	3300005835	Biogas Reactor	MPHARQGSRGRADRMIACRSCGCETTADRICDACAEALRAERAEALGERCRVHRVRYVD
Ga0082206_1021509	3300006225	Mixed Substrate Biogas Reactor	MIACRSCGAPTASSDGICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALQEMQAEWGRC*
Ga0082206_1248333	3300006225	Mixed Substrate Biogas Reactor	MIACRSCGAPTANCDGICRDCADAMREERAAALGEGCRVHRVRYVEDLPVSALEEMQAEWGRC*
Ga0079068_14133551	3300006386	Anaerobic Digestor Sludge	DALLHGAVRLCRSCGCETTADRICPDCAEALRAERAEALAERCRVHRVRYVEDLPVSALEEMQVEWGRC*
Ga0079074_10119781	3300006596	Anaerobic Digestor Sludge	TASSDGICPACADAMRAERSEALSALCRVHRVRRVEDLPVSALEEMQVEWGRR*
Ga0075464_108495691	3300006805	Aqueous	GSTVFRNIRISASEHAAREAGLPGRADRMIACRSCGAPTTSSDGICRDCADAMREERAEALGERCRVHRVRYVEDLPVSVLEEIQRGRC*
Ga0075464_110515993	3300006805	Aqueous	SCGAPTASSDGICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSVLEEMQAERGRC*
Ga0118671_10941003	3300009121	Anaerobic Wastewater Sludge	MIACRSCGAPTASSDGICRDCADAMRAERSEVLSALCRVHRVRYVEDLPVSVLEEMQAEWGRR*
Ga0118671_11535632	3300009121	Anaerobic Wastewater Sludge	MFDRILVAATEHAAREAGLPGRADRETIACRSCGAPTTSGDGICAACAEAMREERAEALGERCRVHRVRYVEDLPVSALEEMRVEWGRC*
Ga0118674_10306341	3300009122	Anaerobic Wastewater Sludge	AAEHAAREAGLPGRADRMIVCRSCGAPTASSDGICRDCADAMREERAEALGERCRVHRVRYVDDLPVSVLQEMQVEWGRC*
Ga0118674_10663653	3300009122	Anaerobic Wastewater Sludge	GLPGRADRMIACRSCGAPTASSDGICRDCADAMRAERSEVLSALCRIHRVRRVEDLPVSVLQEMQAEWGRC*
Ga0118674_10774381	3300009122	Anaerobic Wastewater Sludge	MIACRSCGAPTASSDGICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALEEMQVEWGRC*
Ga0118672_10290474	3300009360	Anaerobic Wastewater Sludge	MIACRSCGAPTAGSDGICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALEEMQAEWGRC*
Ga0118672_10793511	3300009360	Anaerobic Wastewater Sludge	ATEHADREVGLPGRADRETIACRSCGAPTASSDRICRDCADAMREERAAALGERCRVHRVRYVEDLPVSVLEEMQAEWGRR*
Ga0118673_10706981	3300009362	Anaerobic Wastewater Sludge	MIACRSCGAPTASSDGICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALEEMQAEWGRR*
Ga0118673_10767423	3300009362	Anaerobic Wastewater Sludge	MIACRSCGAPTTSSDGICPDCAEALRVERAEALGERCRVHRVRYVEDLPVSALEEMQAERGRC*
Ga0118673_10840701	3300009362	Anaerobic Wastewater Sludge	HAAREVGLPGRADRMIACRSCGAPTASSDGICRDCADAMRAERSEALSALCRIHRVRYVEDLPVSALEEMQVEWGRC*
Ga0116234_12150532	3300009542	Anaerobic Biogas Reactor	MIACRSCGAPTASSDGICRDCADAMRSERSEALSALCRVHRVRYVEDLPVSVLEEMQVEWGRC*
Ga0123327_10474591	3300009607	Anaerobic Biogas Reactor	ADRMIACRSCGAPTASSDEICRDCADAMREERAEALGERCRVHRVRYVEDLPASVLEEMQAEWGRC*
Ga0123327_11332901	3300009607	Anaerobic Biogas Reactor	VGLPGRADRMIACRSCGAPTASSDGICRDCADAMRAERSEALSALCRIHRVRYVEDLPVSALEEMQVEWGRC*
Ga0123327_12014974	3300009607	Anaerobic Biogas Reactor	APTAGSDGICRDCADAMRAERSEALSALCRVHRVRRVEDLPVSVLQEMQAEWGRC*
Ga0123331_11376323	3300009642	Anaerobic Biogas Reactor	ADRMIACRSCGAPTASSDGICRDCADAMRAERSEVLSALCRVHRVRYVEDLPVSVLEEMQAEWGRR*
Ga0123331_11631473	3300009642	Anaerobic Biogas Reactor	RMIACRSCGAPTASSDGICRDCADAMRAERSEVLSALCRVHRVRYVDDLPVSVLQEMQAEWGRR*
Ga0123326_10394021	3300009647	Anaerobic Biogas Reactor	ISDREHLPSEAGLPGRADRMIACRSCGAPTASSDEICRDCADAMREERAEALGERCRVHRVRYVEDLPASVLEEMQAEWGRC*
Ga0123326_10732231	3300009647	Anaerobic Biogas Reactor	GLPGRADRMIACRSCGAPTASSDGICRDCADAMRSERSEALSALCRVHRVRRVEDLPVSVLQEMQAERGRC*
Ga0123326_10880521	3300009647	Anaerobic Biogas Reactor	GLPGRADRMIACRSCGAPTASSDGICRDCADAMRAERSEALSALCRIHRVRYVEDLPVSALEEMQVEWGRC*
Ga0123326_11241682	3300009647	Anaerobic Biogas Reactor	MIACRSCGAPTTSSDGICPDCAEALRVERAEALGERCRVHRVRYVEDLPVSVLQEMQAEWGRR*
Ga0123329_11783303	3300009656	Anaerobic Biogas Reactor	IACHSCGAPTASSDGVCRDCADAMREERAAALGERCRVHRVRYVEDLPVSVLEEMQAEWGRR*
Ga0123329_12626772	3300009656	Anaerobic Biogas Reactor	MIYCHSCGCETTADRICPACAEALRAERAAALGELCRIHRVRYVEDLPVSVLEEMQVEWGRR*
Ga0123328_12807323	3300009659	Anaerobic Biogas Reactor	GTFDRILVAATEHAARESGLPGRADRLIACRSCGAPTASSDGLCPDCAEALRVERAEALGERCRVHRVRYVEDLPVSVLEEMQAEWGRR*
Ga0123328_13054743	3300009659	Anaerobic Biogas Reactor	CETTADRICPDCAEALRVERAEALGERCRVHRVRYVEDLPVSALEEMQVEWGRC*
Ga0116182_11846071	3300009666	Anaerobic Digestor Sludge	LVAATEHAAREAGLPGRADRETIACRSCGCETTSGDGICAACAEAMREERAAAQTERCRVHRVRRVEDLPVSALEEMRVEWGRC*
Ga0116180_11405073	3300009668	Anaerobic Digestor Sludge	MIYCHSCGCETTADRICPDCAEALRVERAAALAELCRVHRVRYVEDLPVSVLEEMQAEWGRC*
Ga0116180_11991281	3300009668	Anaerobic Digestor Sludge	GSGTDAQDGTFDYILVAAAEHAAREAGLPGRADRMIACRSCGCETTSGDGICAACAEALREERAAALDERCRIHRVRYVEDLPVSALEEI*
Ga0116183_11454714	3300009670	Anaerobic Digestor Sludge	ACRSCGCETTSGDGICAACAEAMREERAAAQTERCRVHRVRYVEDLPVSVLEEMQAEWGRC*
Ga0116183_12425044	3300009670	Anaerobic Digestor Sludge	ACRSCGCETTSGDGICAACAEAMREERAAAQTERCRVHRVRRVEDLPVSALEEMRVEWGRC*
Ga0123334_11388502	3300009671	Anaerobic Biogas Reactor	EHAAREVGLPGRADRMIACRSCGAPTASSDGICRDCADAMRSERSEALSALCRVHRVRRVEDLPVSVLQEMQAERGRC*
Ga0116173_12920372	3300009674	Anaerobic Digestor Sludge	MIACRSCGAPTASSDGICRDCADAMREERAAALGERCRVHRVRYVEDLPVSALEEMRVEWGRC*
Ga0116149_11066283	3300009675	Anaerobic Digestor Sludge	MIACRSCGAPTASSDGICRDCADAMREERAAALAERCRIHRVRYVEDLPVSALEEMQAEWGRC*
Ga0123335_14537542	3300009680	Anaerobic Biogas Reactor	RSCGAPTASSDGICRDCADAMRAERSEVLSALCRVHRVRYVEDLPVSVLQEMQAEGGRR*
Ga0116174_100647024	3300009681	Anaerobic Digestor Sludge	MIACRSCGAPTASSDGICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSVLEEMQAERGRC*
Ga0116172_104333051	3300009682	Anaerobic Digestor Sludge	IACRSCGAPTASSDGICRDCADAMREERAEALGERCRVHRVRYVEDLPVSVLEEMQAERGRC*
Ga0116144_101186653	3300009687	Anaerobic Digestor Sludge	MIACRSCGAPTASSDEICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALEEMQVEWGRC*
Ga0116144_106238541	3300009687	Anaerobic Digestor Sludge	RVRLCRSCGCETTSGDGICRDCADAMREERAAALGERCRIHRVRYVDDLPVSALEEMQAERGRC*
Ga0116177_100947414	3300009696	Anaerobic Digestor Sludge	MIACRSCGAPTASSDGICRDCADAMRAERSEVLSALCRVHRVRYVEDLPVSALEEMQVEWGRC*
Ga0116160_12347463	3300009715	Anaerobic Digestor Sludge	PGRVDRETTYCRSCGCETTSGDGICAACAEALREERAAALGERCRIHRVRYVEDLPVSVLEEMQRGRC*
Ga0116159_12517883	3300009720	Anaerobic Digestor Sludge	RVDRETTYCRSCGCETTSGDGICAACAEALREERAAALGERCRIHRVRYVEDLPVSVLEEMQRGRC*
Ga0116161_12577243	3300009767	Anaerobic Digestor Sludge	VDRETTYCRSCGCETTSGDGICAACAEALREERAAALDERCRIHRVRHVEDLPVSVLEEMQAERGRC*
Ga0123332_13542683	3300009770	Anaerobic Biogas Reactor	APTASSDGICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALEEMQAEWGRC*
Ga0123333_104524533	3300009773	Anaerobic Biogas Reactor	SCGAPTASSDRICRDCADAMRAERSEALSALCRVHRVQYVEDLPVSVLEEMQAEWGRC*
Ga0116178_102034221	3300009781	Anaerobic Digestor Sludge	MIACRSCGAPTASSDGICRDCADAMRAERSEVLSALCRIHRVRHVEDLPVSVLEEMQVEWGRC*
Ga0116250_102393982	3300010340	Anaerobic Digestor Sludge	MIYCHSCGCETTADCICPDCAEALRVERAAALGERCRVHRVRRVEDLPVSVLQEMQAEWG
Ga0116243_104081181	3300010344	Anaerobic Digestor Sludge	GLPGRVDRETTYCRSCGCETTSGDGICAACAEALREERAAALGERCRIHRVRYVEDLPVSVLEEMQRGRC*
Ga0116239_108528472	3300010346	Anaerobic Digestor Sludge	MIACRSCGAPTANSGGICRDCADARSEERAAALAERCRIHRVRYVEDLPVSVLEEMQAEWGRC*
Ga0116251_106381072	3300010365	Anaerobic Digestor Sludge	EAGLPGRADRETIACRSCGCETTSSDGICRDCADAMREERAAALGERCRIHRVRYVDDLPVSALQEMQAERGRC*
Ga0172378_104665294	3300014203	Groundwater	CRSCGCETTADRICPACAEALRVGRAAALDERCRIHRVRYVEDLPVSVLEEMQVEWGRC*
Ga0172378_105822103	3300014203	Groundwater	MIACRSCGAPTASSDGICRDCADAMREERAAALAERCRIHRVRYVEDLPVSALEEMQVEWGRC*
Ga0172378_109098582	3300014203	Groundwater	VDRETTSCRSCGAETTNDRICDACADAMREERAAALGERCRVHRVRHVEDLPVSVLEEMQAE
Ga0172381_103345492	3300014204	Landfill Leachate	VDRETTSCRSCGAETTNDRICDACADAMREERAAALGERCRVHRVRHVEDLPVSVLEEMQAERGRC*
Ga0172381_110173001	3300014204	Landfill Leachate	CGCETTADRICPACAEALRAERAEALGERCRIHRVRYVDDLPVSVLEEMRAERGRC*
Ga0172381_113249793	3300014204	Landfill Leachate	ASSDGICRDCADAMREERAAALEERCRVHRVRRVEDLPVSVLEEMQVEWGRR*
Ga0172377_104414363	3300014206	Landfill Leachate	STVFESIIISDREHLPSEAGLPGRVDRVAACRSCGTPTASNDGVCRDCADAMREERAAALGERCRIHRVRYVEDLPVSVLQEMQVEWGRR*
Ga0172377_104451291	3300014206	Landfill Leachate	ADRMIACRSCGAPTASSDGICRDCADAMRAGRSEAIGALCRHHGVRFAEDLPAPAMRRFREEWGRR*
Ga0172377_113887962	3300014206	Landfill Leachate	MIACRSCGAPTASSDEICRDCADAMREERAEALGERCRIHRVRRVEDLPVSVLEEMQAERGRC*
Ga0172377_115227423	3300014206	Landfill Leachate	CGCETTADRICPDCAEALRAERAAALGERCRVHRVRYVDDLPVSVLQEMQAERGRC*
Ga0172382_101510383	3300015214	Landfill Leachate	EAGLPGRVDRVAACRSCGTPTASSDGICRDCADAMREERAAALAERCRIHRVRYVEDLPVSALEEMQAEWGRC*
Ga0172382_102891005	3300015214	Landfill Leachate	CRSCGCETTADRICPDCAEALRVERAEALGERCRIHRVRRVEDLPVSVLEEMQAEWGRR*
Ga0172382_108160283	3300015214	Landfill Leachate	VDRTTIYCHSCGCETTADRICPACAEALRVERAEALGELCRIHRVRYVEDLPVSVLEEMQAEWGRC*
Ga0172382_108910561	3300015214	Landfill Leachate	MIYCHSCGCETTADRICPDCAEALRAERAEALGERCRVHRVRYVDDLPVRVLQEMQAEWGRC*
Ga0209718_10349226	3300025682	Anaerobic Digestor Sludge	FDYIIVAAAEHAAREAGLPGRADRMIACRSCGAPTTSSDGICRDCAYAMREERAAAQTERCRIHRVRYVEDLPVSVLQEMQAEWGRC
Ga0208195_11728111	3300025713	Anaerobic Digestor Sludge	RSCGCETTSSDGICRDCADAMREERAEALGERCRVHRVRYVEDLPVSVLEEMQAERGWC
Ga0208939_11570621	3300025772	Anaerobic Digestor Sludge	SCGAPTASSDEICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALEEMQVEWGRR
Ga0208460_101632011	3300025877	Anaerobic Digestor Sludge	QNGTFGRILVAATEHAAREVGLPGRADRMIACRSCGAPTASSDGICRDCADAMRAERSEVLSALCRIHRVRHVEDLPVSVLEEMQVEWGRC
Ga0209509_10529251	3300026194	Anaerobic Biogas Reactor	SDREHLPSEAGLPGRADRMIACRSCGAPTASSDEICRDCADAMREERAEALGERCRVHRVRYVEDLPASVLEEMQAEWGRC
Ga0209509_10740392	3300026194	Anaerobic Biogas Reactor	PGRADRMIACRSCGAPTASSDGICRDCADAMRSERSEALSALCRVHRVRRVEDLPVSVLQEMQAERGRC
Ga0209312_10527934	3300026195	Anaerobic Biogas Reactor	GAPTASSDEICRDCADAMRAERSEALSALCRIHRVRYVEDLPVSALEEMQVEWGRC
Ga0209312_10814944	3300026195	Anaerobic Biogas Reactor	APTAGSDGICRDCADAMRAERSEALSALCRVHRVRRVEDLPVSVLQEMQAEWGRC
Ga0209612_10775001	3300026250	Anaerobic Biogas Reactor	CRSCGAPTTSSDGICPDCAEALRVERAEALGERCRVHRVRYVEDLPVSALEEMQAERGRC
Ga0209613_10252426	3300026255	Anaerobic Biogas Reactor	VAATEHAAREVGLPGRADRMIACRSCGAPTASSDGICRDCADAMRAERSEVLSALCRIHRVRHVEDLPVSVLEEMQVEWGRC
Ga0209510_10816891	3300026290	Anaerobic Biogas Reactor	RSCGAPTASSDGICRDCADAMRAERSEALSALCRIHRVRYVEDLPVSALEEMQVEWGRC
Ga0209537_10262921	3300027510	Biogas Fermentantion	MIACRSCGAPTANCDGICRDCADAMREERAAALGERCRVHRVRYVEDLPVSVLEEVQAERGRR
Ga0209537_10868321	3300027510	Biogas Fermentantion	GAVRLCRSCGAPTASSDGICRDCAYAMCEERAATLGERCRIHRVRYVEDLPVSVLEEMQAEWGWC
Ga0265294_105696281	3300028602	Groundwater	CRSCGCETTNDRVCPDCAEALRVERAEALGERCRVHRVRYVEDLPVSVLQEMQAEWGRR
Ga0265293_104607432	3300028603	Landfill Leachate	VDRTTIYCHSCGCETTADRICPDCAEALRVERAEALGELCRVHRVRYVEDLPVSVLEEMQAEWGRC
Ga0307350_1167953	3300028757	Anaerobic Digestor Sludge	AAREVGLPGRADRRIACRSCGAPTASSDEICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALEEMQVEWGRR
Ga0307355_1140171	3300029673	Anaerobic Digestor Sludge	EHAAREVGLPGRADRMIACRSCGAPTAGSDGICRDCADAMRAERSEALSALCRVHRVRYVEDLPVSALEEMQVEWGRR
Ga0134854_10572471	3300029822	Fermentation Pit Mud	EAGLPGRVDRETVACRSCDAETTSGDGICPACADAMREERAAALEGRCRIHRVRYVEDLPVSVLEEMQRGRR
Ga0334900_11154403	3300033166	Sludge	GLCLIVYRTVRGNKPACEHLPSEAGLPGRVDRVAACRSCGAPTASSDGICRDCADAMREERAAALGEGCRVHRVRYVEDLPVSVLEEMQAEWGRC
Ga0334884_10595591	3300033170	Sludge	GRVDRTMIYCHSCGCETTADRICPACAEALGERCRVHRVRYVEDLPVSVLEEMQVERGRR
Ga0334891_013016_454_726	3300034686	Sludge	VYRTVRGNKPACEHLPSEAGLPGRVDRVAACRSCGAPTASSDGICRDCADAMREERAAALGEGCRVHRVRYVEDLPVSVLEEMQAEWGRC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075034

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences