Metagenome / Metatranscriptome Family F071788

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071788
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	56 residues
Representative Sequence	VKLKTILGYAAVAFILFFVIKDPTGAAHVINNIGNFLSSIARGFSAFFTSL
Number of Associated Samples	98
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	49.18 %
% of genes near scaffold ends (potentially truncated)	32.79 %
% of genes from short scaffolds (< 2000 bps)	82.79 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.803 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.852 % of family members)
Environment Ontology (ENVO)	Unclassified (31.148 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.639 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.49% β-sheet: 0.00% Coil/Unstructured: 40.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF03703	bPH_2	41.80
PF00892	EamA	6.56
PF02771	Acyl-CoA_dh_N	2.46
PF14437	MafB19-deam	1.64
PF00480	ROK	1.64
PF00106	adh_short	0.82
PF07883	Cupin_2	0.82
PF00756	Esterase	0.82
PF07730	HisKA_3	0.82
PF12900	Pyridox_ox_2	0.82
PF00920	ILVD_EDD	0.82
PF06772	LtrA	0.82
PF02575	YbaB_DNA_bd	0.82
PF00107	ADH_zinc_N	0.82
PF02770	Acyl-CoA_dh_M	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	41.80
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	41.80
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	3.28
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	3.28
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.64
COG0718	DNA-binding nucleoid-associated protein YbaB/EfbC	Transcription [K]	0.82
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.82
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.82
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.82
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.82
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.80 %
Unclassified	root	N/A	8.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.80 %
Unclassified	root	N/A	8.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.80 %
Unclassified	root	N/A	8.20 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	90.16 %
Unclassified	root	N/A	8.20 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	90.16 %
Unclassified	root	N/A	8.20 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	71.31 %
Unclassified	root	N/A	8.20 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	8.20 %
Unclassified	root	N/A	8.20 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.64 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.20 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	7.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.64 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.20 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	4.10 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.64 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.64 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.64 %
Actinomadura oligospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001384\|JGI20190J14840_1010833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	854	Open in IMG/M
3300001384\|JGI20190J14840_1015692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	658	Open in IMG/M
3300001461\|JGI12698J15209_1001831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1151	Open in IMG/M
3300001461\|JGI12698J15209_1006392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	673	Open in IMG/M
3300001867\|JGI12627J18819_10151013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	946	Open in IMG/M
3300001867\|JGI12627J18819_10385917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300003369\|JGI24140J50213_10104232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	938	Open in IMG/M
3300005524\|Ga0070737_10009276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8230	Open in IMG/M
3300005524\|Ga0070737_10089630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1455	Open in IMG/M
3300005524\|Ga0070737_10251699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	712	Open in IMG/M
3300005524\|Ga0070737_10355178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300005529\|Ga0070741_11104174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300005994\|Ga0066789_10075409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1460	Open in IMG/M
3300005995\|Ga0066790_10000242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19023	Open in IMG/M
3300009522\|Ga0116218_1295724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300009525\|Ga0116220_10281472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300009623\|Ga0116133_1035984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1224	Open in IMG/M
3300009644\|Ga0116121_1026356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1847	Open in IMG/M
3300009645\|Ga0116106_1069624	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300009764\|Ga0116134_1000732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16846	Open in IMG/M
3300010341\|Ga0074045_10059725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2727	Open in IMG/M
3300010341\|Ga0074045_10695374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300010379\|Ga0136449_100667382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	1752	Open in IMG/M
3300010858\|Ga0126345_1054494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	778	Open in IMG/M
3300010866\|Ga0126344_1124920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300010866\|Ga0126344_1171404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300010867\|Ga0126347_1300352	Not Available	550	Open in IMG/M
3300010876\|Ga0126361_10561726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300010880\|Ga0126350_10067666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1641	Open in IMG/M
3300014156\|Ga0181518_10284733	Not Available	828	Open in IMG/M
3300014165\|Ga0181523_10130844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1489	Open in IMG/M
3300014200\|Ga0181526_10364907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	918	Open in IMG/M
3300014491\|Ga0182014_10004633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	15671	Open in IMG/M
3300014493\|Ga0182016_10001404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	29355	Open in IMG/M
3300014493\|Ga0182016_10681198	Not Available	579	Open in IMG/M
3300016702\|Ga0181511_1010203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300016750\|Ga0181505_10010590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2133	Open in IMG/M
3300016750\|Ga0181505_10245142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1114	Open in IMG/M
3300017926\|Ga0187807_1023928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1884	Open in IMG/M
3300017928\|Ga0187806_1382772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300017932\|Ga0187814_10156008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300017938\|Ga0187854_10085047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1506	Open in IMG/M
3300017946\|Ga0187879_10007108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	7343	Open in IMG/M
3300017946\|Ga0187879_10007664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7058	Open in IMG/M
3300017946\|Ga0187879_10503849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	672	Open in IMG/M
3300017973\|Ga0187780_10820282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	674	Open in IMG/M
3300018009\|Ga0187884_10031277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2653	Open in IMG/M
3300018017\|Ga0187872_10269693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	755	Open in IMG/M
3300018030\|Ga0187869_10200739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	976	Open in IMG/M
3300018035\|Ga0187875_10215956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1055	Open in IMG/M
3300021180\|Ga0210396_10298496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1427	Open in IMG/M
3300021388\|Ga0213875_10001234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17270	Open in IMG/M
3300021402\|Ga0210385_11426889	Not Available	529	Open in IMG/M
3300021475\|Ga0210392_11309149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300022530\|Ga0242658_1097787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699	Open in IMG/M
3300023056\|Ga0233357_1021154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	773	Open in IMG/M
3300025474\|Ga0208479_1010015	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300025588\|Ga0208586_1006387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3150	Open in IMG/M
3300026291\|Ga0209890_10007123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	4683	Open in IMG/M
3300026294\|Ga0209839_10000580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18460	Open in IMG/M
3300026911\|Ga0209620_1004773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1049	Open in IMG/M
3300027002\|Ga0209110_1009675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1077	Open in IMG/M
3300027058\|Ga0209111_1005709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1248	Open in IMG/M
3300027334\|Ga0209529_1078960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300027504\|Ga0209114_1065475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300027528\|Ga0208985_1030245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1053	Open in IMG/M
3300027574\|Ga0208982_1020434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1297	Open in IMG/M
3300027817\|Ga0209112_10148452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	785	Open in IMG/M
3300027817\|Ga0209112_10165431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	748	Open in IMG/M
3300027895\|Ga0209624_11022186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300027903\|Ga0209488_10193935	Not Available	1531	Open in IMG/M
3300027968\|Ga0209061_1061169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1487	Open in IMG/M
3300027968\|Ga0209061_1214858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300027968\|Ga0209061_1233601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300028562\|Ga0302151_10022073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2355	Open in IMG/M
3300028742\|Ga0302220_10177404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300028877\|Ga0302235_10185872	Not Available	919	Open in IMG/M
3300028879\|Ga0302229_10085793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1506	Open in IMG/M
3300029882\|Ga0311368_10381626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1042	Open in IMG/M
3300029922\|Ga0311363_10911985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	787	Open in IMG/M
3300029954\|Ga0311331_10943690	Not Available	756	Open in IMG/M
3300029992\|Ga0302276_10423386	Not Available	544	Open in IMG/M
3300030007\|Ga0311338_10105989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3477	Open in IMG/M
3300030056\|Ga0302181_10184415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	975	Open in IMG/M
3300030494\|Ga0310037_10175517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	962	Open in IMG/M
3300030519\|Ga0302193_10200184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1117	Open in IMG/M
3300030524\|Ga0311357_10587010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1026	Open in IMG/M
3300030611\|Ga0257182_1153012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709	Open in IMG/M
3300030740\|Ga0265460_11311257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300030741\|Ga0265459_12594204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626	Open in IMG/M
3300030757\|Ga0102768_1587383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613	Open in IMG/M
3300030789\|Ga0102766_10881265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300030804\|Ga0102769_10016675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300030911\|Ga0102763_11211508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	786	Open in IMG/M
3300030981\|Ga0102770_10972899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	908	Open in IMG/M
3300031021\|Ga0102765_11344862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300031021\|Ga0102765_11526508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	639	Open in IMG/M
3300031028\|Ga0302180_10348179	Not Available	752	Open in IMG/M
3300031029\|Ga0074012_11195574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300031064\|Ga0102767_10004345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	861	Open in IMG/M
3300031064\|Ga0102767_10163086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300031064\|Ga0102767_10163948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	707	Open in IMG/M
3300031064\|Ga0102767_11335376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300031089\|Ga0102748_11862134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	810	Open in IMG/M
3300031411\|Ga0102761_12548151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300031411\|Ga0102761_12708723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	713	Open in IMG/M
3300031411\|Ga0102761_12766246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	872	Open in IMG/M
3300031708\|Ga0310686_119842270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3064	Open in IMG/M
3300032160\|Ga0311301_10626203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1541	Open in IMG/M
3300032160\|Ga0311301_10910621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1182	Open in IMG/M
3300032515\|Ga0348332_11820285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300032756\|Ga0315742_11461381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300032756\|Ga0315742_12511266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300032770\|Ga0335085_10044516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6053	Open in IMG/M
3300032783\|Ga0335079_10687707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1070	Open in IMG/M
3300032828\|Ga0335080_11211813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	758	Open in IMG/M
3300032892\|Ga0335081_10049272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6616	Open in IMG/M
3300032892\|Ga0335081_10153290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3289	Open in IMG/M
3300032896\|Ga0335075_10325839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1694	Open in IMG/M
3300032955\|Ga0335076_10436066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1194	Open in IMG/M
3300033002\|Ga0346503_1086083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	717	Open in IMG/M
3300033158\|Ga0335077_11516031	Not Available	641	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.36%
Host-Associated	Host-Associated	1.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.15%
Aquatic	Environmental → Aquatic	17.21%
Human	Host-Associated → Human	0.82%
Plants	Host-Associated → Plants	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.67%
Freshwater	Environmental → Aquatic → Freshwater	17.21%
Peat	Environmental → Terrestrial → Peat	10.66%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.82%
Digestive System	Host-Associated → Human → Digestive System	0.82%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.75%
Loam	Environmental → Terrestrial → Soil → Loam	11.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.66%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.82%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.02%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.10%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.28%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.46%
Contaminated	Environmental → Terrestrial → Soil → Unclassified → Contaminated	0.82%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.82%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.02%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.56%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.92%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	4.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.10%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.28%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.28%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.28%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.46%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.64%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Contaminated → Soil	0.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.82%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.82%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.82%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.82%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001384	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012	Environmental	Open in IMG/M
3300001461	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026911	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027002	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027504	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027968	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030611	Metatranscriptome of decayed wood fungal communities from Pinus contorta in Bitterroot National Forest, Montana, United States - GP1-1 (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030757	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 4A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030789	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030804	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 4B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030911	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 2A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030981	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 4C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031021	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031029	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031064	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 3C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031089	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 2B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031411	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033002	Soil microbial community from agricultural field in Dibrughar, Assam, India - D1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20190J14840_10108331	3300001384	Arctic Peat Soil	VKPKQLLGYAVIAFILFFVIKDPAGAAHIINNIGNFLSSVARGFSEFLSSL*
JGI20190J14840_10156921	3300001384	Arctic Peat Soil	VKLKTILGYAAVAFILFFVIKDPTGAAHVINNIGNFLSSIARGFSAFFTSL*
JGI12698J15209_10018313	3300001461	Forest Soil	VDWKRVQGGALSLKQIIGYAIVALLLFFVIKDPTGAAHSVNDIGNFLSAVARGFTSFIGSL*
JGI12698J15209_10063921	3300001461	Forest Soil	LKLKTIIGYAVVAFLLFFVIKDPTGAAHIVQDIGNFLSSVARGFSNFLDSL*
JGI12627J18819_101510132	3300001867	Forest Soil	VKPKTLLGYAAIAFLLFFVIKDPAGAAHIVSNIGNFLSAIARGFTAFLDSL*
JGI12627J18819_103859172	3300001867	Forest Soil	MVATKSGLERVQGGRALKPKQIAGYAAIAFILFFVIKDPSGAAHIITNIGNFLSSVARGFSSFLDSL*
JGI24140J50213_101042323	3300003369	Arctic Peat Soil	ILGYATIAFLLFFVIKNPTGAAHVVTNIGDFLASAARGFSAFLSSL*
Ga0070737_100092769	3300005524	Surface Soil	MVAIKADLAWVREATVKPKQVFGWLVIAFILFYVIKDPTGAAHIIHDIGNFLTSVASGIANFFNSL*
Ga0070737_100896302	3300005524	Surface Soil	VKPKQILGYAVIAFLLFYIIKEPGGAAHVVSNIGNFLSTVARGFSNFLSSL*
Ga0070737_102516992	3300005524	Surface Soil	VKPKQLLGYAAIAFVLFFVIKDPAGAAHIVSNIGNFLSSVARGFTDFFNSL*
Ga0070737_103551782	3300005524	Surface Soil	TRRGLSYGGGKKVDWERVQGGALSLKQIIGYAIVALLLFFVIKDPTGAAHTVNDIGNFLSSVARGFSAFIGSL*
Ga0070741_111041742	3300005529	Surface Soil	VKPKQLLGYAAIAFVLFFVIKDPAGAAHIVSNIGNFLSAVARGFTDFFNSL*
Ga0066789_100754092	3300005994	Soil	VKLKTILGWLTVAFLLFFVIKNPTGAAHIVNDIGNFLTAVAHGLTDFFTSL*
Ga0066790_1000024214	3300005995	Soil	MKPKTILGYACIAFLLFFVIKDPAGAAHVINNIGNFLSSLARGFSAFFTSL*
Ga0116218_12957241	3300009522	Peatlands Soil	VKLKTILGYAAIAFILFFVIKDPPGAAHVVTNIGNFLASVARGISAFFTSL*
Ga0116220_102814722	3300009525	Peatlands Soil	VKLKTILGYAAIAFILFFVIKDPTGAAHVVTNIGTFLASAARGISAFFTSL*
Ga0116133_10359841	3300009623	Peatland	MVAVKVNWARVQGGTVKLKTILGWLTVAFLLFFVIKNPTGAAHTVNDIGNFLTAVAHGLTDFFTSL*
Ga0116121_10263563	3300009644	Peatland	MVAVKVNWARVQGGTVKLKTILGWLTVAFLLFFVIKDPTGAAHIVNDIGNFLTAVAHGLTDFFTSL*
Ga0116106_10696241	3300009645	Peatland	MVAVKVNWARVQGGTMKLKTILGWLTVAFLLFFVIKNPTGAAHTVNDIGNFLTAVAHGLTNFFTSL*
Ga0116134_10007323	3300009764	Peatland	MKLKTILGYAFIAFLLFFVIKDPAGAAHIINNIGNFLSALARGFSAFFTSL*
Ga0074045_100597254	3300010341	Bog Forest Soil	VQGGTVKLKTILGYAAIAFILFFVIKDPTGAAHVATNIGNFLASAARGIAAFFSSL*
Ga0074045_106953742	3300010341	Bog Forest Soil	RVQGGTVKLKSILGWLAVAFLLFFVIKDPTGAAHLVNDIGNFLSSVAHGLTDFFTSL*
Ga0136449_1006673823	3300010379	Peatlands Soil	MVAIKSGLGRVQGGTVKTKTIINWAIIAFLLFFVIKDPTGAAHIINNIGNFLTSVARGFSNFLSSL*
Ga0126345_10544942	3300010858	Boreal Forest Soil	DWARVQGGTVKLKTILGYAAVAFILFFVIKDPTGAAHVVNNIGNFLASMARGFSSFFTSL
Ga0126344_11249201	3300010866	Boreal Forest Soil	HVKPKTLLGYAAIAFVLFFVIKDPAGAAHIVSNIGNFLSSVARGFTDFFNSL*
Ga0126344_11714041	3300010866	Boreal Forest Soil	VRGGTMKPKTILGYACIAFLLFFVIKDPTGAAHIINNIGNFLSSLARGFSAFFTSL*
Ga0126347_13003521	3300010867	Boreal Forest Soil	VKPKTLLGYAAIAFVLFFVIKDPAGAAHIVSNIGNFLSSVARGFTDFFNSL*
Ga0126361_105617261	3300010876	Boreal Forest Soil	VKLKTILGYAAVAFILFFVIKDPTGAAHVVNNIGNFLASMARGFSSFFTSL*
Ga0126350_100676663	3300010880	Boreal Forest Soil	VKPKQLLGYAVIAFILFFVIKDPTGAAHIINNIGNFLSSVARGFSEFLSSL*
Ga0181518_102847332	3300014156	Bog	MVAVKVNWARVQGGTMKLKTILGWLTVAFLLFFVIKDPTGAAHIVNDIGNFLSSVAHGLTDFFTSL*
Ga0181523_101308441	3300014165	Bog	MVAVKVNWARVQGGTMKLKTILGWLTVAFLLFFVIKDPTGAAHIVNDIGNFLTAVAHGLTDFFTSL*
Ga0181526_103649072	3300014200	Bog	MVAVKVNWARVQGGTMKLKTILGWLTVAFLLFFVIKDPTGAAHIVNDIGNFLTSVAHGLTAFFTSL*
Ga0182014_100046332	3300014491	Bog	MKLKTILGYAFIAFLLFFVIKDPAGAAHVINNIGNFLSSLARGFSAFFTSL*
Ga0182016_1000140414	3300014493	Bog	MVAVKVNWARVQGGIVKLKTILGWLTVAFLLFFVIKNPTGAAHIVNDIGNFLTAAAHGLADFFTSL*
Ga0182016_106811981	3300014493	Bog	MVAVKVNWARVQGGTVKLKTILGWLTVAFLLFFVIKDPTGAAHLVNDIGNFLSSVAHGLTDFFTSL*
Ga0181511_10102032	3300016702	Peatland	MVAVKVNWARVQGGTMKLKTILGWLTVAFLLFFVIKDPTGAAHIVNDIGNFLTSVAHGLTAFFTSL
Ga0181505_100105903	3300016750	Peatland	MKLKTILGWLTVAFLLFFVIKDPTGAAHIVNDIGNFLTSVAHGLTAFFTSL
Ga0181505_102451421	3300016750	Peatland	PGPGGTMKLKTILGYAFIAFLLFFVIKDPAGAAHIINNIGNFLSALARGFSAFFTSL
Ga0187807_10239281	3300017926	Freshwater Sediment	VDWARVQGGTVKLKTILGYAAVAFILFFVIKDPTGAAHVVTNIGNFLASAARGIAAFFAS
Ga0187806_13827721	3300017928	Freshwater Sediment	VAFILFFVIKDPTGAAHVVTNIGNFLASVARGISAFFTSL
Ga0187814_101560081	3300017932	Freshwater Sediment	VDWARVQGGTVKLKTILGYAAVAFILFFVIKDPAGAAHIINNIGNFLASAARGFSAFFTS
Ga0187854_100850471	3300017938	Peatland	AMVAVKVNWARVQGGTVKLKSILGWLAVAFLLFFVIKDPTGAAHIVNDIGNFLTAVAHGLTDFFTSL
Ga0187879_100071083	3300017946	Peatland	VKLKSILGWLAVAFLLFFVIKNPTGAAHTVNDIGNFLTAVAHGLTNFFTSL
Ga0187879_100076648	3300017946	Peatland	MVAVKVNWARVQGGTVKLKTILGWLTVAFLLFFVIKDPTGAAHIVNDIGNFLTAVAHGLTDFFTSL
Ga0187879_105038491	3300017946	Peatland	MKLKTILGYAFIAFLLFFVIKDPAGAAHIINNIGNFLSALARGFSAFFTSL
Ga0187780_108202822	3300017973	Tropical Peatland	VKLKTILGYTAVAFILFFVIKDPTGAAHVVSNIGNFLAEAARGVATFFTSL
Ga0187884_100312773	3300018009	Peatland	MVAVKVNWARVQGGTVKLKSILGWLAVAFLLFFVIKNPTGAAHTVNDIGNFLTAVAHGLTNFFTSL
Ga0187872_102696932	3300018017	Peatland	MMAVKVNWARVQGGTVKLKTILGWLTVAFLLFFVIKDPTGAAHIVNDIGNFLTAVAHGLTNFFTSL
Ga0187869_102007392	3300018030	Peatland	TILGYAFIAFLLFFVIKDPAGAAHIINNIGNFLSALARGFSAFFTSL
Ga0187875_102159562	3300018035	Peatland	MKPKTILGYLCIAFLLFFVIKDPTGAAHIINNIGNFLSSLARGFAAFFTSL
Ga0210396_102984962	3300021180	Soil	VKPKQLLGYAVIAFILFFVIKDPAGAAHIINNIGNFLSSVARGFSEFLSSL
Ga0213875_100012343	3300021388	Plant Roots	VVPAKVDWERVQGGALSLKQIIGYAIVALLLFFVIKDPTGAAHTVNDIGDFLSSVARGFSAFIGSL
Ga0210385_114268892	3300021402	Soil	VKPKQLLGYAVIAFILFFVIKDPAGAAHIINNIGNFLSSVSRGYSEI
Ga0210392_113091492	3300021475	Soil	VKPKQLVGYAAIAFVLFFVIKDPTGAAHIVSNIGNFLSAIARGFTSFLDSL
Ga0242658_10977872	3300022530	Soil	QGSREAHVKPKQLVGYAAIAFVLFFVIKDPTGAAHIVSNIGNFLSAIARGFTSFLDSL
Ga0233357_10211541	3300023056	Soil	YAAIAFILFFVIKDPTGAAHVINNIGNFLSSMARGFSAFFTSL
Ga0208479_10100151	3300025474	Arctic Peat Soil	LRLKVDWALVQGGIVKLKTILGYATIAFLLFFVIKNPTGAAHVVTNIGDFLASAARGFSAFLSSL
Ga0208586_10063875	3300025588	Arctic Peat Soil	VKLKTILGYAAVAFILFFVIKDPTGAAHVINNIGNFLSSIARGFSAFFTSL
Ga0209890_100071238	3300026291	Soil	VKLKTILGWLTVAFLLFFVIKNPTGAAHIVNDIGNFLTAVAHGLTDFFTSL
Ga0209839_100005808	3300026294	Soil	MKPKTILGYACIAFLLFFVIKDPAGAAHVINNIGNFLSSLARGFSAFFTSL
Ga0209620_10047731	3300026911	Forest Soil	LKLKTIIGYAVVAFLLFFVIKDPTGAAHIVQDIGNFLSSVARGFSNFLDSL
Ga0209110_10096752	3300027002	Forest Soil	VKPKTLLGYAAIAFLLFFVIKDPAGAAHIVSNIGNFLSAIARGFTAFLDSL
Ga0209111_10057092	3300027058	Forest Soil	LKPKQIAGYAAIAFILFFVIKDPSGAAHIITNIGNFLSSVARGFSSFLDSL
Ga0209529_10789602	3300027334	Forest Soil	LNLKQLLGYAVIAFLLFFVIKDPSGAAHIVNDIGNFLSSVARGFSEFLDSL
Ga0209114_10654751	3300027504	Forest Soil	VDWKRVQGGALSLKQIIGYAIVALLLFFVIKDPTGAAHSVNDIGNFLSAVARGFTSFIGS
Ga0208985_10302453	3300027528	Forest Soil	AVIAFILFFVIKDPTGAAHIINNIGNFLSSVARGFSEFLSSL
Ga0208982_10204341	3300027574	Forest Soil	KPKQLLGYAVIAFILFFVIKDPTGAAHIINNIGNFLSSVARGFSEFLSSL
Ga0209112_101484522	3300027817	Forest Soil	PKQLVGYAAIAFVLFFVIKDPTGAAHIVSNIGNFLSAIARGFTSFLDSL
Ga0209112_101654311	3300027817	Forest Soil	VKPKQLVGYAAIAFVLFFVIKDPSGAAHIVSNIGNFLSSVARGFSSFLDSL
Ga0209624_110221862	3300027895	Forest Soil	KLWWRQKQTGQASREAHVKPKQLLGYAVIAFILFFVIKDPAGAAHIINNIGNFLSSVARGFSEFLSSL
Ga0209488_101939352	3300027903	Vadose Zone Soil	VKLKTILGYAAIAFILFFVIKDPTGAAHVVNNIGNFLASMARGFSSFFTSL
Ga0209061_10611693	3300027968	Surface Soil	MVAIKADLAWVREATVKPKQVFGWLVIAFILFYVIKDPTGAAHIIHDIGNFLTSVASGIANFFNSL
Ga0209061_12148582	3300027968	Surface Soil	VKPKQLLGYAAIAFVLFFVIKDPAGAAHIVSNIGNFLSSVARGFTDFFNSL
Ga0209061_12336012	3300027968	Surface Soil	VKPKQILGYAVIAFLLFYIIKEPGGAAHVVSNIGNFLSTVARGFSNFLSSL
Ga0302151_100220734	3300028562	Bog	MVAVKVNWARVQGGIVKLKTILGWLTVAFLLFFVIKNPTGAAHIVNDIGNFLTAAAHGLADFFTSL
Ga0302220_101774042	3300028742	Palsa	VKLKTILGWLAVAFLLFFVIKDPTGAAHLVNDIGNFLSSVAHGLTDFFTSL
Ga0302235_101858722	3300028877	Palsa	VKLKTILGWLAVAFLLFFAIKDPTGIAHVINSIGGFLSSVSRGFRNFLEGL
Ga0302229_100857934	3300028879	Palsa	VDWARVQGGTVKLKTILGWLAVAFLLFFVIKDPTGAAHLVNDIGNFLSSVAHGLTDFFTS
Ga0311368_103816261	3300029882	Palsa	WLAVAFLLFFVIKDPTGAAHLVNDIGNFLSSVAHGLTDFFTSL
Ga0311363_109119852	3300029922	Fen	MVAVKVNWARVQGGIVKLKTILGWLTVAFLLFFVIKNPTGAAHIVNDIGNFLTAA
Ga0311331_109436903	3300029954	Bog	VKLKTILGWLTVAFLLFFVIKNPTGAAHIVNDIGNFLTAAAHGLADFFTSL
Ga0302276_104233861	3300029992	Bog	VKLKTILGWLTVAFLLFFVIKNPTGAAHIVNDIGNFLTAAAHGLADFF
Ga0311338_101059893	3300030007	Palsa	VKLKTILGWLAVAFLLFFVIKNPTGAAHIVNDIGNFLTAVAHGLTDFFTSL
Ga0302181_101844152	3300030056	Palsa	MVTAKVYWARVQGGTVKLKTILGWLAVAFLLFFVIKNPTGAAHIVNDIGNFLTAVAHGLTDFFTSL
Ga0310037_101755172	3300030494	Peatlands Soil	VKLKTILGYAAIAFILFFVIKDPTGAAHVVTNIGTFLASAARGISAFFTSL
Ga0302193_102001841	3300030519	Bog	MVAVKVNWARVQGGTVKLKTILGWLTVAFLLFFVIKDPTGAAHIVNDIGNFLTAAAHGLADFFTSL
Ga0311357_105870101	3300030524	Palsa	VNWARVQGGTVKLKTILGWLAVAFVLFFVIKDPAGAAHTVNDIGNFLSSVAHGLTDFFTS
Ga0257182_11530121	3300030611	Host-Associated	MVAIKVDWERVQGGTLNLKQLLGYAVIALLLFFVIKDPTGAAHVVNDIGNFLSSVARGFSAFLSSL
Ga0265460_113112571	3300030740	Soil	REACVKPKQILGYAVIAFILFFVIKDPAGAAHIINNIGNFLSSIARGFSSFLSNL
Ga0265459_125942042	3300030741	Soil	EAHVKPKQLLGYAVIAFILFFVIKDPAGAAHIINNIGNFLSSVARGFSAFLSSL
Ga0102768_15873832	3300030757	Soil	QVSREAHVKPKQLLGYAAIAFVLFFVIKDPAGAAHIVSNIGNFLSSVARGFTDFFNSL
Ga0102766_108812651	3300030789	Soil	GQVSREAHVKPKQLLGYAAIAFVLFFVIKDPAGAAHIVSNIGNFLSSVARGFTDFFNSL
Ga0102769_100166752	3300030804	Soil	RFQGGALSLKQIIGYAIVALLLFFVIKDPTGAAHSVNDIGNFLSAVARGFTSFIGSL
Ga0102763_112115081	3300030911	Soil	ASREAHVKPKQLLGYAVIAFILFFVIKDPAGAAHIINNIGNFLSSVARGFSAFLSSL
Ga0102770_109728991	3300030981	Soil	QGSREAHVKPKQLVGYAAIAFVLFSVIKDPTGAAHIVSNIGNFLSAVARGFTSFLDSL
Ga0102765_113448621	3300031021	Soil	VKPKQLLGYAVIAFILFFVIKDPTGAAHIINNIGNFLSSVGRGFSAFLSSL
Ga0102765_115265082	3300031021	Soil	FFVIKDPAGAAHIVSNIGNFLSSVARGFTDFFNSL
Ga0302180_103481791	3300031028	Palsa	DVVKLKTILGWLAVAFLLFFAIKDPTGIAHVINSIGGFLSSVSRGFRNFLEGL
Ga0074012_111955741	3300031029	Soil	WERVQGGTLNLKQLLGYAVIALLLFFVIKDPTGAAHVVNDIGNFLSSVARGFSSFLSSL
Ga0102767_100043451	3300031064	Soil	VKPKQLVGYAAIAFVLFFVIKDPTGAAHIVSNIGNFLSAVARGFTSFLDSL
Ga0102767_101630861	3300031064	Soil	WTGQVSREAHVKPKQLLGYAAIAFVLFFVIKDPAGAAHIVSNIGNFLSSVARGFTDFFNS
Ga0102767_101639482	3300031064	Soil	VKPKQLLGYAAIAFVLFFVIKDPAGAAHIVSNIGNFLSAVARGFTDFFNSL
Ga0102767_113353761	3300031064	Soil	SREAHVKPKQLIGYLAIAFVLFFVIKDPTGAAHIINNIGNFLSSVARGFSAFLSSL
Ga0102748_118621341	3300031089	Soil	GQGSREAHVKPKQLVGYAAIAFVLFFVIKDPTGAAHIVSNIGNFLSAVARGFTDFFNSL
Ga0102761_125481512	3300031411	Soil	GALSLKQIIGYAIVALLLFFVIKDPTGAAHSVNDIGNFLSAVARGFTSFIGSL
Ga0102761_127087232	3300031411	Soil	SREAHVKPKQLLGYAAIAFVLFFVIKDPAGAAHIVSNIGNFLSAVARGFTDFFNSL
Ga0102761_127662461	3300031411	Soil	SREAHVKPKQLVGYAAIAFVLFFVIKDPTGAAHIVSNIGNFLSAVARGFTSFLDSL
Ga0310686_1198422702	3300031708	Soil	VKPKQILGYAVIAFILFFVIKDPAGAAHIINNIGNFLSAIARGFSSFLSNL
Ga0311301_106262031	3300032160	Peatlands Soil	MVAIKSGLGRVQGGTVKTKTIINWAIIAFLLFFVIKDPTGAAHIINNIGNFLTSVARGFSNFLSSL
Ga0311301_109106213	3300032160	Peatlands Soil	VKLKTILGYAAIAFILFFVIKDPPGAAHVVTNIGNFLASVARGISAFFTSL
Ga0348332_118202851	3300032515	Plant Litter	LKLKTILGYAAIAFLLFFVIKDPTGAAHIVQDIGNFLSSVARGFSSFLDSL
Ga0315742_114613811	3300032756	Forest Soil	RVQGGALNLKQLLGYAVIAFLLFFVIKDPSGAAHIVNDIGNFLSSVARGFSEFLDSL
Ga0315742_125112662	3300032756	Forest Soil	VKLWWRQKRTGQASREAHVKPKQLLGYAVIAFILFFVIKDPAGAAHIINNIGNFLSSVARGFSAFLSSL
Ga0335085_100445163	3300032770	Soil	MVAIKSGLGRVQGGTVKTKTIINWAIIAFLLFFVIKDPTGAAHIINNIGNFLTSVARGFANFLSSL
Ga0335079_106877072	3300032783	Soil	VKLKTILGYAAIAFILFFVIKNPTGAAHVINNIGNFLTSAAHGFSDFFTAL
Ga0335080_112118131	3300032828	Soil	VDWAQVQGGTVKLKTILGYAAIAFILFFVIKNPTGAAHVINNIGNFLTSAAHGFSDFFTA
Ga0335081_100492724	3300032892	Soil	VKLKTILGYTAVAFILFFVIKDPTGAAHVVSNIGNFLASAARGVSAFFTSL
Ga0335081_101532904	3300032892	Soil	VKLKTILGYAAIAFILFFVIKTPTGAAHVINNIGNFLTSAAHGFSDFFTAL
Ga0335075_103258392	3300032896	Soil	VKPKQLVGYAAIAFVLFFVIKDPTGAAHIVSNIGNFLSSVARGFSSFLDSL
Ga0335076_104360662	3300032955	Soil	VDWAQVQGGTVKLKTILGYTAVAFILFFVIKDPTGAAHVVSNIGNFLASAARGVSAFFTS
Ga0346503_10860832	3300033002	Soil	MVATKRTGQRSREAHVKPKQLVGYAAIAFVLFFVIKDPAGAAHIVSNIGNFLSSVARGFSSFLDSL
Ga0335077_115160311	3300033158	Soil	VKLKTILGYTAVAFILFFVIKDPTGAAHVVSDIGNFLASAARGVSAFFTSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071788

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences