Metagenome / Metatranscriptome Family F070195

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070195
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	81 residues
Representative Sequence	MTFPLTPTVIVLGLSPADGDACTGTALPINLSNLQCRPFLPRRLTQLRRIALDHRSRAQTSRFPLARSNQGSTSSANKPLPLSP
Number of Associated Samples	110
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.63 %
% of genes near scaffold ends (potentially truncated)	38.21 %
% of genes from short scaffolds (< 2000 bps)	71.54 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.683 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.073 % of family members)
Environment Ontology (ENVO)	Unclassified (30.894 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.220 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.96% β-sheet: 0.00% Coil/Unstructured: 83.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF04986	Y2_Tnp	39.84
PF14319	Zn_Tnp_IS91	20.33
PF13495	Phage_int_SAM_4	6.50
PF00589	Phage_integrase	4.88
PF13384	HTH_23	1.63
PF13358	DDE_3	1.63
PF13007	LZ_Tnp_IS66	0.81
PF13505	OMP_b-brl	0.81
PF13394	Fer4_14	0.81
PF08867	FRG	0.81
PF00872	Transposase_mut	0.81
PF08450	SGL	0.81
PF03695	UPF0149	0.81
PF13518	HTH_28	0.81
PF00665	rve	0.81
PF13565	HTH_32	0.81
PF00535	Glycos_transf_2	0.81
PF13592	HTH_33	0.81
PF04392	ABC_sub_bind	0.81
PF13408	Zn_ribbon_recom	0.81
PF03401	TctC	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.81
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.81
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.81
COG3079	Uncharacterized conserved protein YgfB, UPF0149 family	Function unknown [S]	0.81
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.81
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.81
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.81
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.81
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.81
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.68 %
Unclassified	root	N/A	7.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.68 %
Unclassified	root	N/A	7.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.68 %
Unclassified	root	N/A	7.32 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.87 %
Unclassified	root	N/A	7.32 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	91.06 %
Unclassified	root	N/A	7.32 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	55.28 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	17.89 %
Unclassified	root	N/A	7.32 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	30.89 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	17.89 %
Unclassified	root	N/A	7.32 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.63 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	28.46 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	17.07 %
Unclassified	root	N/A	7.32 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.63 %
Defluviicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus	0.81 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Magnetospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum	17.07 %
Unclassified	root	N/A	7.32 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4.88 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.25 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	1.63 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1.63 %
Defluviicoccus vanus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → Defluviicoccus vanus	0.81 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.81 %
Rhodoplanes roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	0.81 %

Name	Rank	Taxonomy	Distribution
Magnetospirillum sp. SS-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	17.07 %
Unclassified	root	N/A	7.32 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4.88 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	3.25 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	1.63 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	1.63 %
Bradyrhizobium diazoefficiens SEMIA 5080	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens → Bradyrhizobium diazoefficiens SEMIA 5080	0.81 %
Defluviicoccus vanus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → Defluviicoccus vanus	0.81 %
Rhodoplanes roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	0.81 %

Name	Rank	Taxonomy	Distribution
Magnetospirillum sp. SS-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	17.07 %
Unclassified	root	N/A	7.32 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4.88 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	3.25 %
Rhizobium sp. 60-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 60-20	1.63 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	1.63 %
Bradyrhizobium diazoefficiens SEMIA 5080	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens → Bradyrhizobium diazoefficiens SEMIA 5080	0.81 %
Defluviicoccus vanus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → Defluviicoccus vanus	0.81 %
Rhodoplanes roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1013239	Not Available	1326	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10031489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1430	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10073647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	862	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1012012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1128	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1014581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1497	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1016276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1045	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1029562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	869	Open in IMG/M
3300001141\|JGI12638J13249_100038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2540	Open in IMG/M
3300001171\|JGI12685J13342_100442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	1030	Open in IMG/M
3300001661\|JGI12053J15887_10030211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3044	Open in IMG/M
3300003373\|JGI25407J50210_10097956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	725	Open in IMG/M
3300003659\|JGI25404J52841_10018264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1519	Open in IMG/M
3300003911\|JGI25405J52794_10003978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2617	Open in IMG/M
3300004267\|Ga0066396_10023534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	850	Open in IMG/M
3300004268\|Ga0066398_10117712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	635	Open in IMG/M
3300004629\|Ga0008092_11306543	Not Available	653	Open in IMG/M
3300005162\|Ga0066814_10029496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	814	Open in IMG/M
3300005163\|Ga0066823_10000480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4302	Open in IMG/M
3300005178\|Ga0066688_10503157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	780	Open in IMG/M
3300005181\|Ga0066678_10462191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	844	Open in IMG/M
3300005329\|Ga0070683_100039627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4327	Open in IMG/M
3300005356\|Ga0070674_100580154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	945	Open in IMG/M
3300005363\|Ga0008090_10210266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	723	Open in IMG/M
3300005366\|Ga0070659_100502349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	1034	Open in IMG/M
3300005518\|Ga0070699_100022565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5425	Open in IMG/M
3300005518\|Ga0070699_100063680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3197	Open in IMG/M
3300005543\|Ga0070672_100164143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1844	Open in IMG/M
3300005546\|Ga0070696_100561511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	916	Open in IMG/M
3300005555\|Ga0066692_10615101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	681	Open in IMG/M
3300005764\|Ga0066903_102359242	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300005764\|Ga0066903_106213360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	624	Open in IMG/M
3300005764\|Ga0066903_106397035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	614	Open in IMG/M
3300005764\|Ga0066903_107747776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	552	Open in IMG/M
3300005764\|Ga0066903_108498073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	523	Open in IMG/M
3300005764\|Ga0066903_108637176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	518	Open in IMG/M
3300005937\|Ga0081455_10227578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens → Bradyrhizobium diazoefficiens SEMIA 5080	1378	Open in IMG/M
3300005981\|Ga0081538_10264998	Not Available	646	Open in IMG/M
3300006354\|Ga0075021_10467305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → Defluviicoccus vanus	797	Open in IMG/M
3300006576\|Ga0074047_12063233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1985	Open in IMG/M
3300006581\|Ga0074048_10050251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2469	Open in IMG/M
3300006904\|Ga0075424_100490033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1312	Open in IMG/M
3300006939\|Ga0081244_1540835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	520	Open in IMG/M
3300006954\|Ga0079219_12002488	Not Available	551	Open in IMG/M
3300009011\|Ga0105251_10236455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	823	Open in IMG/M
3300009157\|Ga0105092_10347978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	840	Open in IMG/M
3300009162\|Ga0075423_10490468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1292	Open in IMG/M
3300009168\|Ga0105104_10017821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4222	Open in IMG/M
3300010358\|Ga0126370_10253011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 60-20	1368	Open in IMG/M
3300010358\|Ga0126370_11550670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	632	Open in IMG/M
3300010360\|Ga0126372_10930194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	875	Open in IMG/M
3300010360\|Ga0126372_11210773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	780	Open in IMG/M
3300010361\|Ga0126378_10204727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2051	Open in IMG/M
3300010361\|Ga0126378_10542057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1278	Open in IMG/M
3300010376\|Ga0126381_102035501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	827	Open in IMG/M
3300010863\|Ga0124850_1011766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2783	Open in IMG/M
3300012357\|Ga0137384_10602075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300012469\|Ga0150984_104262231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2337	Open in IMG/M
3300012948\|Ga0126375_10500010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	906	Open in IMG/M
3300013297\|Ga0157378_11826397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	656	Open in IMG/M
3300014968\|Ga0157379_10423917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	1226	Open in IMG/M
3300015371\|Ga0132258_10588369	All Organisms → cellular organisms → Bacteria → Proteobacteria	2793	Open in IMG/M
3300015372\|Ga0132256_103489686	Not Available	529	Open in IMG/M
3300016270\|Ga0182036_10816228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	760	Open in IMG/M
3300016294\|Ga0182041_10086326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2261	Open in IMG/M
3300017965\|Ga0190266_10682769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	638	Open in IMG/M
3300018073\|Ga0184624_10004555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4386	Open in IMG/M
3300020002\|Ga0193730_1035739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	1440	Open in IMG/M
3300021168\|Ga0210406_10773857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 60-20	733	Open in IMG/M
3300021372\|Ga0213877_10006462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2834	Open in IMG/M
3300021560\|Ga0126371_10169108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2261	Open in IMG/M
3300022694\|Ga0222623_10050375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	1601	Open in IMG/M
3300025898\|Ga0207692_10296609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	982	Open in IMG/M
3300025908\|Ga0207643_10096125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	1732	Open in IMG/M
3300025934\|Ga0207686_10986274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	683	Open in IMG/M
3300026121\|Ga0207683_10056731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3436	Open in IMG/M
3300026277\|Ga0209350_1019983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2070	Open in IMG/M
3300026297\|Ga0209237_1033569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2772	Open in IMG/M
3300026319\|Ga0209647_1006326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8518	Open in IMG/M
3300026857\|Ga0208893_1000042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1923	Open in IMG/M
3300027050\|Ga0209325_1000145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3726	Open in IMG/M
3300027070\|Ga0208365_1004561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1652	Open in IMG/M
3300027388\|Ga0208995_1003402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2595	Open in IMG/M
3300027480\|Ga0208993_1000314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6520	Open in IMG/M
3300027523\|Ga0208890_1000468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3718	Open in IMG/M
3300027654\|Ga0209799_1015304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1663	Open in IMG/M
3300027743\|Ga0209593_10020722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2657	Open in IMG/M
3300027873\|Ga0209814_10028172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2305	Open in IMG/M
3300028710\|Ga0307322_10008150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2287	Open in IMG/M
3300028720\|Ga0307317_10348823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	500	Open in IMG/M
3300028721\|Ga0307315_10269700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	536	Open in IMG/M
3300028768\|Ga0307280_10116795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	899	Open in IMG/M
3300028784\|Ga0307282_10072100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	1571	Open in IMG/M
3300028791\|Ga0307290_10065281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	1318	Open in IMG/M
3300028878\|Ga0307278_10164974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	991	Open in IMG/M
3300028880\|Ga0307300_10006190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3025	Open in IMG/M
3300028889\|Ga0247827_10508105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	755	Open in IMG/M
3300031455\|Ga0307505_10145006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. SS-4	1082	Open in IMG/M
3300031544\|Ga0318534_10015673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3916	Open in IMG/M
3300031544\|Ga0318534_10093112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1721	Open in IMG/M
3300031549\|Ga0318571_10007860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2394	Open in IMG/M
3300031561\|Ga0318528_10018372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	3308	Open in IMG/M
3300031561\|Ga0318528_10217103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1024	Open in IMG/M
3300031572\|Ga0318515_10610353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	579	Open in IMG/M
3300031573\|Ga0310915_10045850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2802	Open in IMG/M
3300031573\|Ga0310915_10616502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	768	Open in IMG/M
3300031680\|Ga0318574_10507583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	706	Open in IMG/M
3300031713\|Ga0318496_10156486	Not Available	1245	Open in IMG/M
3300031719\|Ga0306917_10815605	Not Available	731	Open in IMG/M
3300031723\|Ga0318493_10829894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	521	Open in IMG/M
3300031724\|Ga0318500_10487875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	618	Open in IMG/M
3300031744\|Ga0306918_10740786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	768	Open in IMG/M
3300031771\|Ga0318546_10046434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2680	Open in IMG/M
3300031793\|Ga0318548_10056958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1799	Open in IMG/M
3300031819\|Ga0318568_10369485	Not Available	893	Open in IMG/M
3300031846\|Ga0318512_10147738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1132	Open in IMG/M
3300031854\|Ga0310904_10101490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1581	Open in IMG/M
3300031880\|Ga0318544_10166253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	848	Open in IMG/M
3300031896\|Ga0318551_10939318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	505	Open in IMG/M
3300031938\|Ga0308175_101636692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	720	Open in IMG/M
3300031946\|Ga0310910_10357398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1154	Open in IMG/M
3300032067\|Ga0318524_10031699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2441	Open in IMG/M
3300032174\|Ga0307470_10237825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1193	Open in IMG/M
3300032205\|Ga0307472_102615951	Not Available	514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.74%
Host-Associated	Host-Associated	16.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.86%
Plants	Host-Associated → Plants	16.26%
Aquatic	Environmental → Aquatic	4.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.88%
Freshwater	Environmental → Aquatic → Freshwater	2.44%
Sediment	Environmental → Aquatic → Sediment	2.44%
Roots	Host-Associated → Plants → Roots	1.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.98%
Loam	Environmental → Terrestrial → Soil → Loam	17.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.44%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.25%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.44%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.44%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.44%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.25%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.44%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.44%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.63%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300001141	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2	Environmental	Open in IMG/M
3300001171	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006939	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026857	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10132392	3300000580	Forest Soil	MTFTPTVIVLALSPADSNARTATALPINLSDLECRPFLPRRLTQLRRMALDHRFPAQTTCCPLARRNPGSTSTAEKPLPLSP*
AF_2010_repII_A1DRAFT_100314892	3300000597	Forest Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLXRXLTQLRRMDLDHRSRAQTXRFPLARSNQDSTSSANKPPPLSP*
AF_2010_repII_A1DRAFT_100736472	3300000597	Forest Soil	MTLPLTLTVIVLALSPADSDASTGTARSTNRSNLQCRPLLPRRLTHLRRIDLDHRSRAQISRFALERPNQDSTSSPNKPSPLSP*
AP72_2010_repI_A10DRAFT_10120123	3300000651	Forest Soil	MTFPLTLTVIVLGLSPADSDASTGTARPINRSNLQCRPFLPRRLTQLRRIDLDHRSRAQTSRFPLERSNQDS
AF_2010_repII_A100DRAFT_10145812	3300000655	Forest Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLPRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP*
AP72_2010_repI_A100DRAFT_10162762	3300000837	Forest Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLPRTLTPLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP*
AP72_2010_repI_A001DRAFT_10295622	3300000893	Forest Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLPRPLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP*
JGI12638J13249_1000381	3300001141	Forest Soil	MTFPRTLTVIVLNLSPADSDASTGTARPINRSNLQCRPFLPRRLTHLRRIDLDHRSRAQTSRFPLERSNQDPTSSANKPSPLSP*
JGI12685J13342_1004421	3300001171	Forest Soil	MTFPRTLTVIVLNLSPADSDASTGTARPINRSNLQCRPFLPRRLTHLRRIDLDHRSRAQTSRFPLERSNQDPTSS
JGI12053J15887_100302112	3300001661	Forest Soil	MTFPLTPTVIVFDLSPPDSDACTGTALPINLSNLESRPFLPRGLTQLRRIALDQRSRAQTXRFPLARSNPGSTSSANKPLPLSP*
JGI25407J50210_100979562	3300003373	Tabebuia Heterophylla Rhizosphere	MTFPLTPTVIVLGLSPADSDACTGTARLINRSNLECRPFLSRRLTQLRRIALDHRSRAQTSRFPLARSTQAQR*
JGI25404J52841_100182642	3300003659	Tabebuia Heterophylla Rhizosphere	MTFPLTPTVIVLGLSFADSTACTATALLINLSDLECRPFLSRRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSTAQKPLPLSP*
JGI25405J52794_100039781	3300003911	Tabebuia Heterophylla Rhizosphere	MTFPLTPTVIVLALSPADSNACTATALPINLSDLECRPFLPRRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSTAEKPLPLSP*
Ga0066396_100235341	3300004267	Tropical Forest Soil	MTIPLTLIVIVLSLSPVDSDACPGIPLPINFSNLGCRPFLPRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP*
Ga0066398_101177121	3300004268	Tropical Forest Soil	MTFPLTLIVIVLGLSPVDSDARTGPARPINRSNLECRPFLPRRLTQLRRIDLDHRSRAQTSRSPLERSNQDSTSSPNKPSPL
Ga0008092_113065432	3300004629	Tropical Rainforest Soil	MTFPLTPTVIVLALSPADNDDCTGTALPINLSNLQYRPFLPRRFTQLRRIALDHRSRAQTSRLPLARSNQGSTSSANKPLPLSP*
Ga0066814_100294962	3300005162	Soil	MTFPLTPTMIVLGLSPADSDACAGTARPINRSNLECRPFLPRRLTQLRGIALDHRSRAQTTCFPLARRNPSSTSNANKPLPQSP*
Ga0066823_100004806	3300005163	Soil	MTFPLTPTVIVLGLSPADSDACAGTARPINRSNLECRPFLPRRLTQLRRIALDHRSRAQTTCFPLARRNPSSTSNANKPLPQSP*
Ga0066688_105031571	3300005178	Soil	MTFPLTPTVIVLGLSPADSDACTGTALPINLSNLECRPFLPRRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSSAEKPLPLSP*
Ga0066678_104621912	3300005181	Soil	MTFPLTLTVIVLSLSPADSNACTGTARPINRSNLECRPFLPRRLTRLRRIALDHRSRVQTSRFPLARSNPGSTSSANKPLPLSP*
Ga0070683_1000396271	3300005329	Corn Rhizosphere	MTFPLTPTVIVLGLSPADSDACTGTALPIDLSDLECRPFLPPRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSSAEKPLPLSP*
Ga0070674_1005801541	3300005356	Miscanthus Rhizosphere	MTFPLTPTVIVLGLSPADSDACTGTALPIDLSDLECRPFLPPRLTQLRRIALDHRFRAQTTCFPLARRNPGS
Ga0008090_102102662	3300005363	Tropical Rainforest Soil	MTFPLTPTVIVLDLSPADSDACTGTPLPINFSNLGCRPFLPRTLTQLRRIDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP*
Ga0070659_1005023492	3300005366	Corn Rhizosphere	MTFPLTPTVIVLGLSPADSDACAGTARPINRSNLECRPFLPRRLTQLRRIALDHRPRAQTTCFPLARRNPSSTSNANKPLPQSP*
Ga0070699_1000225652	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTFPLTLTAIVLGLSAADSDANTGTARPINRSNLQCRSFLPRRLTQLRRIDLNHRSRAQTSRFPLERSNQDSTSSANKPSPLSP*
Ga0070699_1000636804	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTFPLTPTVIVLGLSPADSDAYTGTALPISLSNLECRPFLPRRLTQLRRIGSITGPARKQTAFRSHANPGSTSSANKPLPLSP*
Ga0070672_1001641431	3300005543	Miscanthus Rhizosphere	MTFPLTPTVIVLGLSPADSDACAGTARPINRSNLECRPFLPRRLTQLRRIALDHRPRAQTTCFPLARRNPSSTSNANKPLPQ
Ga0070696_1005615111	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTFPLTPTVIVLGLSPADSDACTGTALPIDLSDLECRPFLPPRLTQLRRIALDHRSRAQTTCFPLARRNPSSTSNANKPLPQSP*
Ga0066692_106151012	3300005555	Soil	MTFPLTLTVIVLGLSPADSDASTGTARPINRSNLQCRPFLPRRLTQLRRIDLDHRSRAQTSRFPLERSN
Ga0066903_1023592421	3300005764	Tropical Forest Soil	MGFALPQPFSCDTMTFTPTVIVLALSPADSNACTGTALPINLSDLECRPFLPRRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSTA
Ga0066903_1062133601	3300005764	Tropical Forest Soil	MTFPLTPTVIVLALSPADNDDCTVTALPINLSNLQYRPFLPRRFTQLRRIALDHRSRAQTSRLPLARSNQGSTSSANKPLPLSP*
Ga0066903_1063970352	3300005764	Tropical Forest Soil	MTFPLTPTVIVLGLSPADNDACTGTALPINLSNLEYRPFLPRRLTQLRRIALDHRSRAQTSRFPLERSNQGSTSSANKPLPLYP*
Ga0066903_1077477762	3300005764	Tropical Forest Soil	MTIPLTLIVIVLSLSPVDSDACPGIPLPINFSNLGCRPFLPRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSAN
Ga0066903_1084980731	3300005764	Tropical Forest Soil	MTFPLTLTVIVLGLSPADSDARTGTARPINRSNLECRPFLPRRLMQLRRIALDHRSDPQTICFPLARRNPGSTSSANKPLPL*
Ga0066903_1086371761	3300005764	Tropical Forest Soil	MTFTPTVIVLALSPADSNACTATALLINLSDLECRPFLSRRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSTAQKPLPLSP*
Ga0081455_102275781	3300005937	Tabebuia Heterophylla Rhizosphere	MTFPLTPTVIVLGLSPADSNTCTGTALPINRSNLECRPFLPRRLTQLRRIALDHRFRPQTICFPLARRNPGSTSTAEKPLPLSP*
Ga0081538_102649981	3300005981	Tabebuia Heterophylla Rhizosphere	IVLGLSPADSDACTGTPLPTNFSNLGCRPFLPRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP*
Ga0075021_104673051	3300006354	Watersheds	MTFPLTPTVIVLSLSPADSDACTGTALPINLSNPECRPFLPRRLTQLRRIALDHQSRAQTTCFPLAHCNPGGSVHNLSHI*
Ga0074047_120632333	3300006576	Soil	MTFPLTPTVIVLGLSPADSDACAGTARPINRSNLECRPFLPRRLTQLRRIALDHRSRAQTTCFPLARRNPSSTSTANKPLPLSP*
Ga0074048_100502511	3300006581	Soil	MTFPLTPTVIVLGLSPADSDACAGTARPINRSNLECRPFLPRRLTQLRRIALDHRSRAQTTCFPLARRNPSSTSTANKPLPQSP*
Ga0075424_1004900331	3300006904	Populus Rhizosphere	MTFPLTLTVIVLGLSPAHSDASTGTARPINRSNLQCRPFLPRRLTQLWRIDLDRRSRAQTSRFPLERSNQDSTSSPNKPSPLSP*
Ga0081244_15408352	3300006939	Tropical Rainforest Soil	MPAIVLGLSPADSDACTGTPLPINFSNLGCRPFLSRPLTQLRRMDLDHRSRAQTNRFPLARSNQDSTSSANKPPPLSP*
Ga0079219_120024881	3300006954	Agricultural Soil	MTFPLTPTVIVLGLIISPADNDDCTGTALPINLSNLEYRPFLPRRLTQLRRIALDQQSGAQTSRLPLARSNQASTSSANKPVPLSP*
Ga0105251_102364552	3300009011	Switchgrass Rhizosphere	MTFPLTPTVIVLGLSPADSDACTGTALPIDLSDLECRPFLPPRLTQLRRIALDHRFRAQTTCFPLARRNPGST*
Ga0105092_103479781	3300009157	Freshwater Sediment	MTFPLAPTPIVLGLSPADSDACTGTTLPINLSNLECRPFLPPRLTQLRRTALDHRSRAQTSRFPLARSNPG
Ga0075423_104904681	3300009162	Populus Rhizosphere	MTFPLTLTVIVLGLSPADSDASTGTARPINRSNLQCRPFLPRRLTQLRRIDLDHRSRAQTSRFPLERSNQDSTSSPNKPSPLSP*
Ga0105104_100178214	3300009168	Freshwater Sediment	MTFPLAPTPIVLGLSPADSDACTGTTLPINLSNLECRPFLPPRLTQLRRTALDHRSRAQTSRFPLARSNPGSTSSANKPLPLSP*
Ga0126370_102530111	3300010358	Tropical Forest Soil	MTFPLTLTVIVLALSPADSDASTGTARSINRSNLQCRPFLPRRLTHLRRIDLDHRSRAQTSRFPLERPNQDST
Ga0126370_115506702	3300010358	Tropical Forest Soil	MTFPLTLTVIVLGLSPADSDASTGTARPINRSNLQCRPFLPRRLTQLRRIDLDHRSRAQTSRFPLERS
Ga0126372_109301942	3300010360	Tropical Forest Soil	MTFPLTLTVIVLGLSPADSDARTGTVRPINRSNLECRSFLPRRLTQLRRIALDHQSRAQTTCFPLARRNPG*
Ga0126372_112107732	3300010360	Tropical Forest Soil	MTFPLTPTVIALGLSPADSDACTGTPLPINFSNLGCRPFLPRRLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP*
Ga0126378_102047273	3300010361	Tropical Forest Soil	MTIPLTLIVIVLSLSPVDSDACPGIPLPINFSNLGCRPFLPRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANK
Ga0126378_105420572	3300010361	Tropical Forest Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINLSNLGCRPFLPRRLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP*
Ga0126381_1020355012	3300010376	Tropical Forest Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLPRTLTQLRRIDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP
Ga0124850_10117663	3300010863	Tropical Forest Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLRCRPFLPRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP*
Ga0137384_106020752	3300012357	Vadose Zone Soil	MTIPLTLIVIVLSLSPVDSDARTGPARPINRSNLQCRPFLPRRLTQLRRIDLDHRSRAQTSRFPLERSNQDSTSS
Ga0150984_1042622311	3300012469	Avena Fatua Rhizosphere	MTFPLTPTVIVLGLSPANSDACTGTALPIDLSDLECRPFLPPRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSSAEKPLPLSP*
Ga0126375_105000101	3300012948	Tropical Forest Soil	MTFPLTLTVIVLGLSPADSDASTGTARPINRSNLQCRPFLPRRLTQLRRIALDHRFRAQTTCFPLARPNPGSTSTAQKPLPL
Ga0157378_118263972	3300013297	Miscanthus Rhizosphere	MTFPLTPTVIVLGLSPADSDACAGTARPINRSNLECRPFLPRKLTQLRRIALDHRSRAQTTCFPLARRNPSSTSNANKPLPQSP*
Ga0157379_104239172	3300014968	Switchgrass Rhizosphere	MTFPLTPTVIVLGLSPADSDACTGTALPIDLSDLECRPFLPPRLTQLRRIALDHRFRTQTTCFPLARRNPGSTSSAEKPLPLSP*
Ga0132258_105883694	3300015371	Arabidopsis Rhizosphere	MTFPLTLTVIVLNLSPADSDASTGTARPINRSNLQCRPFLPRRLTHLRRIDLDHRSRAQTSHFPLERSNQDPTSSANKPSPLSP*
Ga0132256_1034896861	3300015372	Arabidopsis Rhizosphere	TPTVIVLGLSPADSDACTGTALPIDLSDLECRPFLPPRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSSAEKPLPLSP*
Ga0182036_108162281	3300016270	Soil	MTIPLTLIVIVLSLSPVDSDACPGIPLPINFSNLGCRPFLPRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPP
Ga0182041_100863263	3300016294	Soil	MTFPLTPTVIVLGLSSADNDDCTGTARPINRSNVECRPFLPRRLTQLRRIALDHQSRAQTTCFPLARRNPGSTSSAN
Ga0190266_106827692	3300017965	Soil	MTFPLAPTPIVLGLNPADSDACTGTTLPINLSNLECRLPPRLTQLRRTALDHRSRAQTSRFPLARSNPGSTSSAN
Ga0184624_100045555	3300018073	Groundwater Sediment	MTFPLTPTVIVLGLSPADSDACTGTALPIDLSDPECRPFLPPRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSSAEKPLPLSP
Ga0193730_10357392	3300020002	Soil	MTFPLTPTVIVLGLSPADSDACTRTALPIDLSDLECRPFLPPRLTQLRRIALDHRFRAQTICFPLARRNPGSTSSAEKPLPLS
Ga0210406_107738571	3300021168	Soil	MTFPLTLTVIVLGLSPADSDASTGTARPINRSNLQCRPFLPRRLTQLRRIDLDHRSRAQTSRFPLERSNQDSTSSPN
Ga0213877_100064622	3300021372	Bulk Soil	MTFPLTPTVIVLGLSPADSDACTSIALPINLSNLECRPFLPRRLTQLRRMALDHPSRAQTSRFPLARSNPGSTSSPNKPLPLSP
Ga0126371_101691081	3300021560	Tropical Forest Soil	MTIPLTLIVIVLSLSPVDSDACPGIPLPINFSNLGCRPFLPRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP
Ga0222623_100503751	3300022694	Groundwater Sediment	MTFPLTPTVIVLGLSPADSDACPGTALPINLSDLECRPFLPRRLTQLRRIALDHRFRAQITRFPLARRNPGSRSSAEKPLPLSP
Ga0207692_102966091	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTFPLTPTVIVLGLSPADSDACAGTARPINRSNLECRPFLPRKLTQLRRIALDHRSRAQTTCFPLARR
Ga0207643_100961253	3300025908	Miscanthus Rhizosphere	MTFPLTPTVIVLGLSPADSDACTGTALPIDLSDLECRPFLPPRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSSAEKPLPLSP
Ga0207686_109862742	3300025934	Miscanthus Rhizosphere	MTFPLTPTVIVLGLSPADSDACTGTALPIDLSDLECRPFLPPRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSSAE
Ga0207683_100567313	3300026121	Miscanthus Rhizosphere	MTFPLTPTVIVLGLSPADSDACAGTARPINRSNLECRPFLPRRLTQLRRIALDHRSRAQTTCFPLARRNPSSTSTANKPLPQSP
Ga0209350_10199831	3300026277	Grasslands Soil	MTFPLTLTVIVLSLSPADSNACTGTARPINRSNLECRPFLPRRLTRLRRIALDHRSRVQTSRFPLARSNPGSTSSA
Ga0209237_10335693	3300026297	Grasslands Soil	MTFPLTLTVIVLSLSPADSNACTGTARPINRSNLECRPFLPRRLTRLRRIALDHRSRVQTSRFPLARSNPGSTSSANKPLPLSP
Ga0209647_10063269	3300026319	Grasslands Soil	MTFPLTLTVIVLGLSPADSDASTGTARPINRSNLQCRPFLPRRLTQLRRIDLDHRSRAQTSRFPLERSNQDSTSSPNKPSPLSP
Ga0208893_10000422	3300026857	Soil	MTFPLTPTMIVLGLSPADSDACAGTARPINRSNLECRPFLPRRLTQLRRIALDHRSRAQTTCFPLARRNPSSTSNANKPLPQSP
Ga0209325_10001453	3300027050	Forest Soil	MTFPRTLTVIVLNLSPADSDASTGTARPINRSNLQCRPFLPRRLTHLRRIDLDHRSRAQTSRFPLERSNQDPTSSANKPSPLSP
Ga0208365_10045614	3300027070	Forest Soil	LQLSAILLRHVMTFPLTLTVIVLGLSPADSDASTGTARPINRSNLQCRPFLPRRLTQLRRIDLDHRSRAQTSRFPLERSNQDSTSSPNKPSPLSP
Ga0208995_10034021	3300027388	Forest Soil	MTVTLTSTVIVLGPSAADSNACTGTALPINLSNLESRPFLPRGLTQLRRIALDQRSRAQTSRFPLARSNPGSTSSANKPLPLSP
Ga0208993_10003148	3300027480	Forest Soil	MTFPLTPTVIVFDLSPPDSDACTGTALPINLSNLESRPFLPRGLTQLRRIALDQRSRAQTSRFPLARSNPGSTSSANKPLPLSP
Ga0208890_10004682	3300027523	Soil	MTFPLTPTVIVLGLSPADSDACAGTARPINRSNLECRPFLPRRLTQLRRIALDHRSRAQTTCFPLARRNPSSTSNANKPLPQSP
Ga0209799_10153043	3300027654	Tropical Forest Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLPRPLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP
Ga0209593_100207223	3300027743	Freshwater Sediment	MTFPLAPTPIVLGLSPADSDACTGTTLPINLSNLECRPFLPPRLTQLRRTALDHRSRAQTSRFPLARSNPGSTSSANKPLPLSP
Ga0209814_100281723	3300027873	Populus Rhizosphere	MTFPLTPTVIVLALSPADSNACTATALPINLSDLECRPFLPRRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSTAEKPLPLSP
Ga0307322_100081502	3300028710	Soil	MTFPLTPTVIVLGLSPADSDACPGTALPINLSDLECRPFLPRRLTQLRRIALDHRSRAQTTCFPLARRNPGSTSSANKPLPLSP
Ga0307317_103488231	3300028720	Soil	MTFPLTPTVIVLGLSPADSDACTGTARPINRSNLECRPFLPRRLTQLRRIALDHRFRAQTICFPLARRN
Ga0307315_102697002	3300028721	Soil	MTFPLTPTVIVLGLSPADSDACTRTALPIDLSDLECRPFLPPRLTQLRRIALDHRFRAQTICFPLARRNPGSTSSAEK
Ga0307280_101167951	3300028768	Soil	MTFPLTPTVIVLGLSPADSDACPGTALPINLSDLECRPFLPRRLTQLRRIALDHRFRAQTICFPLARRNPGSTSSAEKPLPLS
Ga0307282_100721003	3300028784	Soil	MTFPLTPTVIVLGLSPADSDACTGTARPINRSNLECRPFLPRRLTQLRRIALDHRSRAQTTCFPLARRNPGSTSSAH
Ga0307290_100652812	3300028791	Soil	MTFPLTPTVIVLGLSPADSDACTGTALPINLSDLECRPFLPRRLTQLRRIALDHRFRAQITRFPLARRNPGSRSSAEKPLPLSP
Ga0307278_101649742	3300028878	Soil	MTFPLTPTVIVLGLSPADSDACTGTAGPINCSNLECRPFLPRRLTQMRRIALDHRSRAQTTGFPLARSNPSSTSSANKP
Ga0307300_100061903	3300028880	Soil	MTFPLTPTVIVLGLSPADSDACPGTALPINLSDLECRPFLPRRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSSAEKPLPLSP
Ga0247827_105081051	3300028889	Soil	MTFTPTVIVLALSPADSNACTTALPINLSDLECRPFLPRRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSSAEKPLPLSP
Ga0307505_101450062	3300031455	Soil	MTFPLTPTVIVLGLSPANSDACTGTALPIDLSDLECRPFLPPRLTQLRRIALDHRFRAQTTCFPLARRNPGSTSSAEKPLPLSP
Ga0318534_100156731	3300031544	Soil	MTFPLTPTVIVLGLSPADNDDCTGTARPINRSNVECRPFLPRRLTQLRRIALDHQSRAQTTCFPLARR
Ga0318534_100931123	3300031544	Soil	MTLPLTLTVIVLALSPADSDASTGTARSTNRSNLQCRPLLPRRLTHLRRIDLDHRSRAQISRFALERPNQD
Ga0318571_100078603	3300031549	Soil	MTLPLTLTVIVLALSPADSDASTGTARSTNRSNLQCRPLLPRRLTHLRRIDLDHRSRAQISRFALERPNQDSTSSPNKPSPLSP
Ga0318528_100183722	3300031561	Soil	MTFLLTLTVIVLGLSPADSDASTGTARPINRSNLQCRPFLPRRLTQLRRIDLDHRSRAQTSRFPLERSNQDSTSSPNKPSPLSP
Ga0318528_102171032	3300031561	Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLPRTLTQLRRIDLDHRSRAQTSRFPLTRSNQDSTSSANKPPPLSP
Ga0318515_106103532	3300031572	Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLPRTLTQLRRIDLDHRSRAQTSRFPLARSKQDSTSSANKPP
Ga0310915_100458502	3300031573	Soil	MTFPLTPTVIVLGLSPADNDDCTGTARPINRSNVECRPFLPRRLTQLRRIALDHQSRAQTTCFPLARRNPGSTSSANKPLPLSP
Ga0310915_106165022	3300031573	Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLLRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLS
Ga0318574_105075832	3300031680	Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLPRTLTQLRRIDLDHRSRAQTSRFPLARSNQD
Ga0318496_101564862	3300031713	Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLPRTLTQLRRIDLDHRSRAQTSRFPLARSNQDSTSS
Ga0306917_108156051	3300031719	Soil	MTFPLTPTVIVLGLSPADSDACTVTPLPINFSNLGCRPFLPRTLTQLRRIDLDHRSRAQTSRFPLTRSNQDSTSSANKPPPLSP
Ga0318493_108298942	3300031723	Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLLRTLTQLRRMDLDHRSRAQTSRFPLARSNQDST
Ga0318500_104878751	3300031724	Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLLRTLTQLRRMDLDHRSRAQTSRFPLARSNQD
Ga0306918_107407862	3300031744	Soil	MTIPLTLIVIVLSLSPVDSDACPGIPLPINFSNLGCRPFLPRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLS
Ga0318546_100464343	3300031771	Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLLRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP
Ga0318548_100569583	3300031793	Soil	MTIPLTLIVIVLSLSPVDSDACPGIPLPINFSNLGCRPFLPRTLTQLRRMDLDHRSRAQTSRFPLARSNQD
Ga0318568_103694852	3300031819	Soil	HHAADRSRATLLQLSAILLRHVMTFPLTLTVIVLALSPADSDASTGTARSINRSNLQCRPFLPRRLTHLRRIDLDHRSRAQTSRFPLERPNQDSTSSPNKPSPLSP
Ga0318512_101477382	3300031846	Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLLRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSSANKPP
Ga0310904_101014901	3300031854	Soil	LLQPTAILLRHVMTFPLAPTPIVLGLSPADSDACTGTALLINLSNLECRPVLPPRLTQLRRIALDHRSRAQTTCFQLARRNPGSTSSAEKPLPLSP
Ga0318544_101662531	3300031880	Soil	MTFPLTPTVIVLGLSPADSDACTGTPLPINFSNLGCRPFLLRTLTQLRRMDLDHRSRAQTSRFPLARSNQDSTSS
Ga0318551_109393181	3300031896	Soil	MTFPLTPTVIVLDLSPADSDACTGTPLPINFSNLGCRPFLPRTLTQLRRIDLDHRSRAQTSRFPLARSNQDSTSSANKPPPLSP
Ga0308175_1016366922	3300031938	Soil	MTFPLTPTVIVLGLSPADGDACTGTALPINLSNLQCRPFLPRRLTQLRRIALDHRSRAQTSRFPLARSNQGSTSSANKPLPLSP
Ga0310910_103573982	3300031946	Soil	MTFPLTPTVIVLDLSPADSDACTGTPLPINFSNLGCRPFLPRTLTQLRRIDLDHRSRAQTSRFPLTRSNQDSTSSANKPPPLSP
Ga0318524_100316993	3300032067	Soil	MTFPLTPTVIVLGLSPADNDDCTGTARPINRSNVECRPFLPRRLTQLRRIALDHQSRAQTTCFPLARRNPGSTSGPNKPLPLSP
Ga0307470_102378252	3300032174	Hardwood Forest Soil	MTFPLTPNVIVLSLSPADSDACTGTARPINRSNLECRPFLPRRLTQLRRIALDHRSRAQTSRFPLARRNPGSTSSANKPLPLSP
Ga0307472_1026159511	3300032205	Hardwood Forest Soil	HHAADRSRATLLQLSAILLRHVMTFPLTLSVIVLGLSPADSAASTGTVRPINRSNLQCRPFLPRRLTQLRRIDLDHRSRAQTSRFPLERSNQDSTSSPNKPSPLSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070195

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences