Metagenome / Metatranscriptome Family F069627

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069627
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	56 residues
Representative Sequence	VDLTDEDAIPIYMRISDKVLHLRRLGMTYTNIAERLGINPWMAKKAARWGNIQKA
Number of Associated Samples	88
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.04 %
% of genes near scaffold ends (potentially truncated)	24.39 %
% of genes from short scaffolds (< 2000 bps)	68.29 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.309 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (18.699 % of family members)
Environment Ontology (ENVO)	Unclassified (34.146 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (48.780 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.81% β-sheet: 0.00% Coil/Unstructured: 48.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13784	Fic_N	5.79
PF02661	Fic	3.31
PF04365	BrnT_toxin	2.48
PF13470	PIN_3	2.48
PF00589	Phage_integrase	2.48
PF03008	DUF234	2.48
PF05973	Gp49	1.65
PF04014	MazE_antitoxin	1.65
PF13487	HD_5	1.65
PF01381	HTH_3	1.65
PF01174	SNO	1.65
PF07045	DUF1330	1.65
PF09369	MZB	0.83
PF09660	DUF2397	0.83
PF01609	DDE_Tnp_1	0.83
PF12706	Lactamase_B_2	0.83
PF03235	DUF262	0.83
PF00528	BPD_transp_1	0.83
PF13289	SIR2_2	0.83
PF01680	SOR_SNZ	0.83
PF13484	Fer4_16	0.83
PF13683	rve_3	0.83
PF04519	Bactofilin	0.83
PF06739	SBBP	0.83
PF00881	Nitroreductase	0.83
PF04073	tRNA_edit	0.83
PF13924	Lipocalin_5	0.83
PF13419	HAD_2	0.83
PF04338	DUF481	0.83
PF00072	Response_reg	0.83
PF00989	PAS	0.83
PF08843	AbiEii	0.83
PF11066	DUF2867	0.83
PF01555	N6_N4_Mtase	0.83
PF06210	DUF1003	0.83
PF05016	ParE_toxin	0.83
PF03364	Polyketide_cyc	0.83
PF03601	Cons_hypoth698	0.83
PF08281	Sigma70_r4_2	0.83
PF14417	MEDS	0.83
PF00107	ADH_zinc_N	0.83
PF14827	dCache_3	0.83
PF00578	AhpC-TSA	0.83
PF08850	DUF1820	0.83
PF01966	HD	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1672	Predicted ATPase, archaeal AAA+ ATPase superfamily	General function prediction only [R]	2.48
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	2.48
COG0311	Pyridoxal 5'-phosphate synthase subunit PdxT (glutamine amidotransferase)	Coenzyme transport and metabolism [H]	1.65
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.65
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	1.65
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	1.65
COG0118	Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH	Amino acid transport and metabolism [E]	1.65
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.83
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.83
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.83
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.83
COG4517	Uncharacterized conserved protein, DUF1820 domain	Function unknown [S]	0.83
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.83
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.83
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3137	Putative salt-induced outer membrane protein YdiY	Cell wall/membrane/envelope biogenesis [M]	0.83
COG2855	Uncharacterized membrane protein YadS, UPF0324 family	Function unknown [S]	0.83
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.83
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.83
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.83
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.83
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.83
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.83
COG0214	Pyridoxal 5'-phosphate synthase subunit PdxS	Coenzyme transport and metabolism [H]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.31 %
Unclassified	root	N/A	5.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.31 %
Unclassified	root	N/A	5.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.31 %
Unclassified	root	N/A	5.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.22 %
Unclassified	root	N/A	5.69 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.63 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	42.28 %
Unclassified	root	N/A	5.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.63 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	42.28 %
Unclassified	root	N/A	5.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.63 %
Candidatus Sumerlaeota	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Sumerlaeota	0.81 %
candidate division WS5	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WS5	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	21.95 %
Unclassified	root	N/A	5.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.63 %
Candidatus Acidulodesulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Candidatus Acidulodesulfobacterales	0.81 %
Candidatus Sumerlaeia	class	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Sumerlaeota → Candidatus Sumerlaeia	0.81 %
candidate division WS5 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WS5 → candidate division WS5 bacterium	0.81 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	21.14 %
Unclassified	root	N/A	5.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.63 %
unclassified Candidatus Sumerlaeia	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Sumerlaeota → Candidatus Sumerlaeia → unclassified Candidatus Sumerlaeia	0.81 %
Candidatus Acidulodesulfobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Candidatus Acidulodesulfobacterales → Candidatus Acidulodesulfobacterium	0.81 %
Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_65_9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_65_9	0.81 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.81 %
candidate division WS5 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WS5 → candidate division WS5 bacterium	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	21.14 %
Unclassified	root	N/A	5.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.63 %
Candidatus Acidulodesulfobacterium ferriphilum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Candidatus Acidulodesulfobacterales → Candidatus Acidulodesulfobacterium → Candidatus Acidulodesulfobacterium ferriphilum	0.81 %
Candidatus Sumerlaeia bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Sumerlaeota → Candidatus Sumerlaeia → unclassified Candidatus Sumerlaeia → Candidatus Sumerlaeia bacterium	0.81 %
unclassified Geobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae	0.81 %
Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_65_9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_65_9	0.81 %
candidate division WS5 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WS5 → candidate division WS5 bacterium	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	21.14 %
Unclassified	root	N/A	5.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.63 %
Geobacteraceae bacterium GWC2_53_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium GWC2_53_11	0.81 %
Candidatus Acidulodesulfobacterium ferriphilum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Candidatus Acidulodesulfobacterales → Candidatus Acidulodesulfobacterium → Candidatus Acidulodesulfobacterium ferriphilum	0.81 %
Candidatus Sumerlaeia bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Sumerlaeota → Candidatus Sumerlaeia → unclassified Candidatus Sumerlaeia → Candidatus Sumerlaeia bacterium	0.81 %
Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_65_9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_65_9	0.81 %
candidate division WS5 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WS5 → candidate division WS5 bacterium	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_462747_len_4619_cov_20_109331	All Organisms → cellular organisms → Bacteria	4669	Open in IMG/M
3300002243\|C687J29039_10007026	All Organisms → cellular organisms → Bacteria	4676	Open in IMG/M
3300002407\|C687J29651_10004382	All Organisms → cellular organisms → Bacteria	5959	Open in IMG/M
3300002895\|MAL_1004792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3578	Open in IMG/M
3300003987\|Ga0055471_10298474	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300004013\|Ga0055465_10372322	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300004108\|Ga0065181_1168687	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_65_9	595	Open in IMG/M
3300004238\|Ga0066635_10206917	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300004239\|Ga0066650_10157810	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300005876\|Ga0075300_1053536	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300005883\|Ga0075299_1008884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	830	Open in IMG/M
3300005886\|Ga0075286_1006887	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300009078\|Ga0105106_11263887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300009087\|Ga0105107_10630749	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	746	Open in IMG/M
3300009091\|Ga0102851_11548856	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	740	Open in IMG/M
3300009171\|Ga0105101_10034624	All Organisms → cellular organisms → Bacteria → Proteobacteria	2451	Open in IMG/M
3300009296\|Ga0103681_1029823	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium GWC2_53_11	2985	Open in IMG/M
3300009296\|Ga0103681_1069232	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1763	Open in IMG/M
3300009777\|Ga0105164_10282702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	830	Open in IMG/M
3300009868\|Ga0130016_10011125	All Organisms → cellular organisms → Bacteria → Proteobacteria	14431	Open in IMG/M
3300009868\|Ga0130016_10078129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3083	Open in IMG/M
3300011391\|Ga0137331_1001507	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300011402\|Ga0137356_1006881	All Organisms → cellular organisms → Bacteria	1951	Open in IMG/M
3300011408\|Ga0137460_1000424	All Organisms → cellular organisms → Bacteria	3383	Open in IMG/M
3300011408\|Ga0137460_1006273	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300011408\|Ga0137460_1100505	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300011428\|Ga0137456_1014116	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300012140\|Ga0137351_1025613	Not Available	783	Open in IMG/M
3300012152\|Ga0137347_1011231	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Candidatus Acidulodesulfobacterales → Candidatus Acidulodesulfobacterium → Candidatus Acidulodesulfobacterium ferriphilum	1164	Open in IMG/M
3300012152\|Ga0137347_1016377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1034	Open in IMG/M
3300012152\|Ga0137347_1019796	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	974	Open in IMG/M
3300012226\|Ga0137447_1042142	Not Available	798	Open in IMG/M
3300012673\|Ga0137339_1000282	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300012673\|Ga0137339_1000282	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300012673\|Ga0137339_1003556	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300012675\|Ga0137337_1003196	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1862	Open in IMG/M
(restricted) 3300013123\|Ga0172368_10104909	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
(restricted) 3300013123\|Ga0172368_10291792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300013232\|Ga0170573_10728834	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300013315\|Ga0173609_10317003	All Organisms → cellular organisms → Bacteria	4488	Open in IMG/M
3300013315\|Ga0173609_10589075	All Organisms → cellular organisms → Bacteria	5714	Open in IMG/M
3300014265\|Ga0075314_1018427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1241	Open in IMG/M
3300014265\|Ga0075314_1137903	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	557	Open in IMG/M
3300014314\|Ga0075316_1094077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	706	Open in IMG/M
3300014871\|Ga0180095_1013704	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1239	Open in IMG/M
3300014884\|Ga0180104_1089706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	865	Open in IMG/M
3300014885\|Ga0180063_1052780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1174	Open in IMG/M
3300015252\|Ga0180075_1084808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300015253\|Ga0180081_1090590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300015254\|Ga0180089_1071493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300015256\|Ga0180073_1004299	All Organisms → cellular organisms → Bacteria	2066	Open in IMG/M
3300015259\|Ga0180085_1015757	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300018055\|Ga0184616_10035951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1602	Open in IMG/M
3300018055\|Ga0184616_10324457	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300018068\|Ga0184636_1123524	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300018070\|Ga0184631_10006404	All Organisms → cellular organisms → Bacteria	3499	Open in IMG/M
3300021063\|Ga0206227_1001034	Not Available	2791	Open in IMG/M
3300021063\|Ga0206227_1002793	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300021063\|Ga0206227_1003284	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300021090\|Ga0210377_10011586	All Organisms → cellular organisms → Bacteria	6772	Open in IMG/M
3300022226\|Ga0224512_10037748	All Organisms → cellular organisms → Bacteria → Proteobacteria	2991	Open in IMG/M
3300025013\|Ga0209317_1001509	All Organisms → cellular organisms → Bacteria	20025	Open in IMG/M
3300025013\|Ga0209317_1003511	All Organisms → cellular organisms → Bacteria → Proteobacteria	9777	Open in IMG/M
3300025013\|Ga0209317_1058245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1097	Open in IMG/M
3300025119\|Ga0209126_1025492	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300025129\|Ga0210027_1045759	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300025160\|Ga0209109_10303596	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300025164\|Ga0209521_10259645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1008	Open in IMG/M
3300025174\|Ga0209324_10838407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300025289\|Ga0209002_10662548	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	551	Open in IMG/M
3300025312\|Ga0209321_10048814	All Organisms → cellular organisms → Bacteria	2484	Open in IMG/M
3300025312\|Ga0209321_10254859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	879	Open in IMG/M
3300025314\|Ga0209323_10181029	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300025322\|Ga0209641_10136657	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300025322\|Ga0209641_10149314	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300025322\|Ga0209641_10443172	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	930	Open in IMG/M
3300025324\|Ga0209640_10680837	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Sumerlaeota → Candidatus Sumerlaeia → unclassified Candidatus Sumerlaeia → Candidatus Sumerlaeia bacterium	822	Open in IMG/M
3300025326\|Ga0209342_10286264	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1437	Open in IMG/M
3300025326\|Ga0209342_10773452	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	759	Open in IMG/M
3300025559\|Ga0210087_1036754	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	986	Open in IMG/M
3300025567\|Ga0210076_1005240	All Organisms → cellular organisms → Bacteria	2956	Open in IMG/M
3300026014\|Ga0208776_1004257	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1192	Open in IMG/M
3300026040\|Ga0208144_1014335	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	831	Open in IMG/M
3300026044\|Ga0208287_1017014	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	660	Open in IMG/M
3300027657\|Ga0256865_1006362	All Organisms → cellular organisms → Bacteria	3258	Open in IMG/M
3300027657\|Ga0256865_1018335	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300027819\|Ga0209514_10060961	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2505	Open in IMG/M
3300027819\|Ga0209514_10106295	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300027900\|Ga0209253_10026276	All Organisms → cellular organisms → Bacteria	4885	Open in IMG/M
3300027900\|Ga0209253_10225905	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1483	Open in IMG/M
3300028028\|Ga0265292_1002536	All Organisms → cellular organisms → Bacteria	12526	Open in IMG/M
3300030606\|Ga0299906_10842006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	679	Open in IMG/M
3300030613\|Ga0299915_10724829	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	627	Open in IMG/M
3300031772\|Ga0315288_10697377	All Organisms → cellular organisms → Bacteria → Proteobacteria	958	Open in IMG/M
3300031834\|Ga0315290_11361250	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300031949\|Ga0214473_10013167	All Organisms → cellular organisms → Bacteria	9692	Open in IMG/M
3300031949\|Ga0214473_10140810	Not Available	2808	Open in IMG/M
3300031949\|Ga0214473_11516779	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WS5 → candidate division WS5 bacterium	676	Open in IMG/M
3300031949\|Ga0214473_11816973	Not Available	602	Open in IMG/M
3300031965\|Ga0326597_10000264	All Organisms → cellular organisms → Bacteria	99307	Open in IMG/M
3300031965\|Ga0326597_10775674	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	998	Open in IMG/M
3300031965\|Ga0326597_10963240	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300031997\|Ga0315278_11742734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300032164\|Ga0315283_10848517	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300032173\|Ga0315268_10851950	All Organisms → cellular organisms → Bacteria → Proteobacteria	914	Open in IMG/M
3300032342\|Ga0315286_10074024	All Organisms → cellular organisms → Bacteria	3625	Open in IMG/M
3300032401\|Ga0315275_10781326	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300033233\|Ga0334722_10000335	All Organisms → cellular organisms → Bacteria → Proteobacteria	71649	Open in IMG/M
3300033233\|Ga0334722_10000335	All Organisms → cellular organisms → Bacteria → Proteobacteria	71649	Open in IMG/M
3300033233\|Ga0334722_10018884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5956	Open in IMG/M
3300033233\|Ga0334722_10071027	All Organisms → cellular organisms → Bacteria	2690	Open in IMG/M
3300033233\|Ga0334722_10223061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1391	Open in IMG/M
3300033408\|Ga0316605_10178424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1762	Open in IMG/M
3300033489\|Ga0299912_10171490	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300033489\|Ga0299912_11162368	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300034083\|Ga0373901_092995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300034089\|Ga0373913_0160576	Not Available	639	Open in IMG/M
3300034100\|Ga0373910_0044326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1093	Open in IMG/M
3300034100\|Ga0373910_0113502	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300034155\|Ga0370498_013113	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300034191\|Ga0373909_0006108	Not Available	3270	Open in IMG/M
3300034773\|Ga0364936_008837	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300034773\|Ga0364936_067286	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	672	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.06%
Engineered	Engineered	8.94%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	53.66%
Terrestrial	Environmental → Terrestrial	37.40%
Wastewater	Engineered → Wastewater	4.06%
Bioremediation	Engineered → Bioremediation	4.06%
Solid Waste	Engineered → Solid Waste	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	33.33%
Freshwater	Environmental → Aquatic → Freshwater	26.83%
Sediment	Environmental → Aquatic → Sediment	21.95%
Marine	Environmental → Aquatic → Marine	4.06%
Metal	Engineered → Bioremediation → Metal	4.06%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.44%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	2.44%
Floodplain	Environmental → Terrestrial → Floodplain	1.63%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.63%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Landfill	Engineered → Solid Waste → Landfill	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	21.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	17.07%
Lake	Environmental → Aquatic → Freshwater → Lake	11.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	7.32%
Loam	Environmental → Terrestrial → Soil → Loam	7.32%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	4.06%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.25%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.25%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	2.44%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.44%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	2.44%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.63%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Sediment	Environmental → Aquatic → Marine → Sediment	0.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	21.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.38%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	9.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.94%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	7.32%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	5.69%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	4.88%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.25%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.25%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.44%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	2.44%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.63%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	1.63%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.63%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.63%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	0.81%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.81%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	18.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	9.76%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	7.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	4.88%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	4.06%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	4.06%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.25%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.25%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.25%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.44%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	2.44%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.44%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	2.44%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.63%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.63%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	1.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.63%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	1.63%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	1.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	0.81%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	0.81%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.81%
Iron-Reducing Enrichment Culture	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Iron-Reducing Enrichment Culture	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.81%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	0.81%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
3300002243	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2	Environmental	Open in IMG/M
3300002407	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1	Environmental	Open in IMG/M
3300002895	Midway enrichment cultures of iron-reducing bacteria from Chocolate Pots hot spring, Yellowstone National Park	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004108	Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/9/14 0.8 um filter (version 2)	Environmental	Open in IMG/M
3300004238	Groundwater microbial communities from aquifer - Crystal Geyser CG06_land_8/20/14_3.00	Environmental	Open in IMG/M
3300004239	Groundwater microbial communities from aquifer - Crystal Geyser CG23_combo_of_CG06-09_8/20/14_all	Environmental	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005883	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009296	Microbial communities from groundwater in Rifle, Colorado, USA-3A_0.2um	Environmental	Open in IMG/M
3300009777	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water	Environmental	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300011391	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT163_2	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011408	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT723_2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300012140	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT690_2	Environmental	Open in IMG/M
3300012152	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT590_2	Environmental	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012673	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT399_2	Environmental	Open in IMG/M
3300012675	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT333_2	Environmental	Open in IMG/M
3300013123 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11m	Environmental	Open in IMG/M
3300013232	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA ? S1	Engineered	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300014871	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1Da	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300015253	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10D	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300021063	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos D4	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022226	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13	Environmental	Open in IMG/M
3300025013	Soil microbial communities from Rifle, Colorado, USA - Groundwater B2	Environmental	Open in IMG/M
3300025119	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_1 (SPAdes)	Environmental	Open in IMG/M
3300025129	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-10 (SPAdes)	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025314	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026014	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)	Environmental	Open in IMG/M
3300026040	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026044	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1 (SPAdes)	Environmental	Open in IMG/M
3300027657	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeq	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300028028	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 296A	Engineered	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300034083	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.2	Engineered	Open in IMG/M
3300034089	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.2	Engineered	Open in IMG/M
3300034100	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.2	Engineered	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M
3300034191	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.1	Engineered	Open in IMG/M
3300034773	Sediment microbial communities from East River floodplain, Colorado, United States - 4_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_00435130	2088090008	Soil	VDLTDEDAIPAYMKISEKVLHLRRLGMEYAKVAERLGVNLWMAKKAGRWSRPAPLSPNEFIKDDE
C687J29039_100070265	3300002243	Soil	VALTDEDAVPTYVKTTDKILHLRRLGMTYASIAERLGINLWMAKRAARWAKTR*
C687J29651_100043821	3300002407	Soil	EDAVPVYMKISEKVLHLRRLGMTYAAIAERLGVNLWMAKRAACPPRXHHQG*
MAL_10047922	3300002895	Iron-Reducing Enrichment Culture	VDLTDEDAVPVYMRISDKVLHLRRLGMTYANIAERLGINPWMPKKAARWAKGQNKQRESFS*
Ga0055471_102984743	3300003987	Natural And Restored Wetlands	VDLTDEDVIPIYMKISEKVLHLRRLGMTYASIAERLGINLWMAKKAARWSKIHHSL*
Ga0055465_103723222	3300004013	Natural And Restored Wetlands	MNEDAVPIYMKISEKALHLRRLGMTYPNIAERLGINPWMAKKAARWGNTQKG*
Ga0065181_11686871	3300004108	Groundwater	TASEIPIEVDLTDEDAIPIYMRISDKVLHLRRLGMPFTSIAEHLGINPWMAKKAARWGNIRKA*
Ga0066635_102069171	3300004238	Groundwater	VDLTDEDAIPIYMRISDKVLHLRRLGMPFTSIAEHLGINPWMAKKA
Ga0066650_101578101	3300004239	Groundwater	VDLTDEDAIPIYMRISDKVLHLRRLGMPFTSIAEHLGINPWMAKKAARWGNIRKA*
Ga0075300_10535361	3300005876	Rice Paddy Soil	VELTNEEAIPIYMRISDKVLHLRRLGMTYTNIAERLGINPWMAKKAARWSNIQKA*
Ga0075299_10088842	3300005883	Rice Paddy Soil	VDLTDEDAVPIYMRISDKVLHLRRLGMTYTNIAERLGINPWMAKKAARWGNIQKA*
Ga0075286_10068872	3300005886	Rice Paddy Soil	MNEDAVPIYMKISEKALHLRRLGMIYPNIAERLGINPWMAKKAARWGNTQKG*
Ga0105106_112638872	3300009078	Freshwater Sediment	VGLTDEDAVPVYMKISEKVLHLRRLGIPYAIIGERLGINRWLAMRAFRWAKDGYRKNQI*
Ga0105107_106307491	3300009087	Freshwater Sediment	MDLTDEDAFPIYMKISEKVVHLRRLGLEYTNIAERLGINPRMAKKAARWGNIQKA*
Ga0102851_115488561	3300009091	Freshwater Wetlands	MDLTDEDAIPAYMKVSEKVLHLRRLGMSYPSIADRLGINPWMAKKAARWGNIQKA*
Ga0105101_100346241	3300009171	Freshwater Sediment	MNLTDEDAIPAYMKISEKVLHLRRLGMSYARIADRLGVNVWMAKRAARWAKAQNRESPSR
Ga0103681_10298231	3300009296	Groundwater	VDLTDEDAIPIYMRISDKVLHLRRLGVPYASIADRLGVNLWMAKRAARWGNIRQA*
Ga0103681_10692322	3300009296	Groundwater	VNLTDEDAIPVYIKISEKVLHLRRLGMPFTSIAERLGINPWMAKKAARWGNIQKA*
Ga0105164_102827022	3300009777	Wastewater	VNLTDEDAIPIHMRISDKVLHLRRLGMTYTNIAERLGINPWMAKKAARWGNIRKA*
Ga0130016_100111259	3300009868	Wastewater	VNLTDEGAVPIYMKISEKVLHLRRLGMRYTSIAERLGVNLWMARKAARWGNIQKAQAGQPEQD*
Ga0130016_100781294	3300009868	Wastewater	MDSDTIPIYLKISEKVLHLRRLGMTYAGITERLGVNLWMAKKAARWGKSQTGLTHMPTKRIM*
Ga0137331_10015072	3300011391	Soil	MDADAVPIYMKISEKVVHLRRLGMPYTSIAERIGVNLWMAKRAARWAKTHNK*
Ga0137356_10068812	3300011402	Soil	MNLTDEDAIPIYMKISEKVLHLRRLGMGYTNIAERIGVNLWMAKKAARWAYRKEDPRRLE
Ga0137460_10004244	3300011408	Soil	VDLTDEDAVPGYMKISEKVLHLRRLGMPYTSIAERIGVNLWMAKRAARWAKTHNK*
Ga0137460_10062731	3300011408	Soil	TIPIYMRISDKVLHLRRMGMTYTNIAERLGINPWMAKKAARWGNIQKA*
Ga0137460_11005051	3300011408	Soil	VDLTDEDAIPIYMRISDKVLHLRRLGMTYTNIAERLGINPWMAKKAAQWGNIQKG*
Ga0137456_10141162	3300011428	Soil	VDLTDEDTIPIYMRISDKVLHLRRMGMTYTNIAERLGINPWMAKKAARWGNIQKA*
Ga0137351_10256131	3300012140	Soil	VDLTDEDAVPNYMKISEKVLHLRRLGMPYANIAERLGINLWMAKRAARWANVEKS*
Ga0137347_10112311	3300012152	Soil	VNLTDEDAIPIYMKISEKVLHLRLLGMPYARIAVRLGVNLWMALSAARWAKTHYNS
Ga0137347_10163772	3300012152	Soil	VDLTDEDVVPAYMKISEKVLHLRRLGMTYADIAERLGVNLWMVKKAAHWGKAQTGFGP*
Ga0137347_10197962	3300012152	Soil	MDLTNQDAIPIYMRISDKVLHLRRLGMTYTNIAERLGINPWMAKKAARWGNIRKA*
Ga0137447_10421421	3300012226	Soil	VDLTDEDAVPTHIKIAGKVLHLRRLSMAYTSIADRLGVNTCLAKRAARCALA
Ga0137339_10002821	3300012673	Soil	IRAASEIAIQVELTDEETIPIYMRISDKVLHLRRLGMTYTNIAERLGINPWMAKKAARWGNIQKA*
Ga0137339_10002824	3300012673	Soil	VDLTDEDAVPGYMKISEKVLHLRRLGMPYTSIAERIGVNLWMAKRAARWAKAQNK*
Ga0137339_10035564	3300012673	Soil	VDLTDEDAVPAYVKISEKVLHLRRLGMPYTSIAEHLGVNLWMAKRAARWAKTHNK*
Ga0137337_10031964	3300012675	Soil	VDLTDEDAVPGYMKISEKVLHLRRLGMPFTSISERLGINPWMAKKAARWGNIQKA*
(restricted) Ga0172368_101049091	3300013123	Freshwater	SEIPIEVDLRDEDAVPTYIKISEKVLHLRRLGMEYTKIAESLGVNAWMVKKAAWWGKAR*
(restricted) Ga0172368_102917921	3300013123	Freshwater	EASVPVYMKISEKVLHLRRLGMPFADIADRLGVNLWMVKKAARWGRLH*
Ga0170573_107288343	3300013232	Sediment	VDLTDEDAIPVYMKISEKVLHLRRLGMPYATIAERLKINLWMAQRAARWGNRND
Ga0173609_103170031	3300013315	Sediment	IEVDLTDEDAVPVYIKISEKVLHLRRLGMAYAGIAEQLGVNLWMAKKASRWAKTR*
Ga0173609_105890754	3300013315	Sediment	MDLTGEDAIPIYMRISNKVLHLRRLGMTYTTIAERLGINPWMAKKAARWGNIQKG*
Ga0075314_10184271	3300014265	Natural And Restored Wetlands	VDLMNEDAVPIYMKISEKALHLRRLGMTYPNIAERLGINPWMAKKAARWGNTRKG*
Ga0075314_11379032	3300014265	Natural And Restored Wetlands	LTDEDVIPIYMRISDKVPHLRRLGMTYTNIAERLGINPWMAKKSARWSNTKKG*
Ga0075316_10940771	3300014314	Natural And Restored Wetlands	ASEIPIEMDLTDEDAFPIYMRISDKVLHLRRLGMTYTNIAEHLGINPWMAKKAARWSNIQKA*
Ga0180095_10137042	3300014871	Soil	VDLTDEDAIPIYMRISDKVLHLRRLGLPFTSIAERLGINPWMAKKAARWGNIQKA*
Ga0180104_10897062	3300014884	Soil	SEIPIEVDLTNEDAVPVYMKISKKVLHLRRLGMHFTGIAERLEINPWMAKKAARWSNIQKA*
Ga0180063_10527802	3300014885	Soil	VDLTDEDAIPIYMRISDKVLHLLRLGMPYAIIAEHLGVNMWMAKKAARWGNIQKA*
Ga0180075_10848081	3300015252	Soil	MNLKDDDTIPTYMKVSEKVLHLRRLGMSYTSIAERLRINLWMAKKAAQWGNIQKA*
Ga0180081_10905901	3300015253	Soil	VDLTDEDAIPIYVKISEMVLHLRRVGMAYTNIAERLGINPWMAKKAARWGNIQKG*
Ga0180089_10714931	3300015254	Soil	VDLTDEYAVPVYMKISEKVLHLRRLGMTYTNIAEQLGINPWMAKKAARWSNIQKA*
Ga0180073_10042992	3300015256	Soil	VDLTDEDAVPVYMKISEKVLHLRRLGMTYTNIAEHLGINPWMAKKAARWGNIQKG*
Ga0180085_10157573	3300015259	Soil	VNLTDEGAVPVYRKISEKVLHLRRLGMAYATIAERLKINLWMAKRAARWGKTHLKRRENTSPY*
Ga0184616_100359512	3300018055	Groundwater Sediment	DLMDKDAVPIYMKISEKVLHLRRLGMALTSIAECLGVNLWIVKKAALRAKSH
Ga0184616_103244572	3300018055	Groundwater Sediment	VDLTDEDVVPAYMKISEKVLHLRRLGMTYADIAERLGVNLWMVKKAAHWGKAQTGFGPEMSI
Ga0184636_11235242	3300018068	Groundwater Sediment	VDLTDEDSIPVYMIIAGKVLHLRRLGMSFASIAERLGVNLWMAKRAARWGKIHHKG
Ga0184631_100064041	3300018070	Groundwater Sediment	ASEIPIEVELRDEDAIPAYMKISEKVVHLRRLGMTYTGIAERLGVNLWMAKKAARRGNIQKG
Ga0206227_10010341	3300021063	Deep Subsurface Sediment	VGLTDEDAIPAYMKISEKVLHLRRLGMGYTNIAERLGINPWMAKKAARWGNIQQA
Ga0206227_10027934	3300021063	Deep Subsurface Sediment	VNLTDEDAIPAYIKVSEKVLHLRRLGMTYPGIAERLGVNLWMAKKAARWSNIRKA
Ga0206227_10032844	3300021063	Deep Subsurface Sediment	VDLADNDAVPFYMKISKKVVHLRRLGMTYASIADSLGVNLWMAKKAGRWGKTH
Ga0210377_100115861	3300021090	Groundwater Sediment	ELRDENAIPAYMKVSEKVLHLRRLGMPYATIAERLKINLWMAERAARWGKSHPR
Ga0224512_100377484	3300022226	Sediment	VIPIEVDLTDQDAAPVYMKMSDKVQHLRRLGMPYAEIAERLRINLWMAKKAARWGRTLPMGS
Ga0209317_100150916	3300025013	Soil	MDLTNEDAVPIYMKISEKVLHLRRLGMPYATIAERLKINLWMAKRAARWAKAIKP
Ga0209317_10035115	3300025013	Soil	VDLTDEDAIPIYMRISDKVLHLRRLGVPYASIADRLGVNLWMAKRAARWGNIRQA
Ga0209317_10582452	3300025013	Soil	VNLTDEDAIPVYIKISEKVLHLRRLGMPFTSIAERLGINPWMAKKAARWGNIQKA
Ga0209126_10254921	3300025119	Soil	DEDAVPVYMKISEKVLHLRRLGMTYAAIAERLGVNLWMAKRAACPPRRHHQG
Ga0210027_10457592	3300025129	Aquifer	VDLTDEDAIPIYMRISDKVLHLRRLGMPFTSIAEHLGINPWMAKKAARWGNIRKA
Ga0209109_103035961	3300025160	Soil	PIEVNLTDEDAVPVYMKISEKVLHLRRLGMTYAAIAERLGVNLWMAKRAACPPRRHHQG
Ga0209521_102596451	3300025164	Soil	VDLTDKDAIPIYMKISGKVLHLQRLGMAYTRIAERLGVNLWMAKKAARWGNIQNA
Ga0209324_108384072	3300025174	Soil	VDLTGEDAVPVYMKISEKGLHLRRLGMTYAAIAEQLGVNLWMAKRATHWSKAHQEKKDSFSLGR
Ga0209002_106625481	3300025289	Soil	VDLTDEDAIPIYMRISDKVLHLRRLGMTYTNIAERLGINPWMAKKAVRWG
Ga0209321_100488143	3300025312	Soil	VNLTDKDTVPNYMKISEKVLHLRRMGMTYTNIAEHLGINPWMAKKATRWGNIRKA
Ga0209321_102548592	3300025312	Soil	VELTNEEAIPIYMRISDKVLHLRRLGVPYASIADRLGVNLWMAKRAARWGNIRQA
Ga0209323_101810291	3300025314	Soil	MNLKDDDAIPVYMKVSDKVLHLRRLGMTYPSICERLGVKRWMALRAARWAKAQQKTRKS
Ga0209641_101366572	3300025322	Soil	VDLTGEDAVPVYMKISEKVLHLRRLGMTYAAIAEQLGVNLWMAKRATHWSKAHQEKKDSFSLGR
Ga0209641_101493141	3300025322	Soil	LTDEDAIPIYMGISEKVLHLRRLGMTYAGIAERLGVNLWMTKRAARWLKTHHNGGKNPSR
Ga0209641_104431722	3300025322	Soil	VDLTDEDAIPIYMRISDKVLHLRRLGMTYTNIAERLGINPWMAKKAARWGNIQKA
Ga0209640_106808371	3300025324	Soil	VDLTDKDAVPIYMKISEKVSHLGRLGMSYTSIADRLEINPWMAKKAARWGTISRKHRQDSLDRDA
Ga0209342_102862643	3300025326	Soil	VDLTDEDAIPIYMRISDKVLHLRRLGVPYASIADRLGVNLWMAKRAARWGNI
Ga0209342_107734521	3300025326	Soil	PTYIKISEKVLHLRRLGMSYDAICDRLGVNRWMALRAVKWIMRKN
Ga0210087_10367542	3300025559	Natural And Restored Wetlands	MNEDAVPIYMKISEKALHLRRLGMTYPNIAERLGINPWMAKKAARWAKAQNK
Ga0210076_10052403	3300025567	Natural And Restored Wetlands	MNEDAVPIYMKISEKALHLRRLGMTYTNIAERLGINPWMAKKAARWGYIQKG
Ga0208776_10042572	3300026014	Rice Paddy Soil	MNEDAVPIYMKISEKALHLRRLGMIYPNIAERLGINPWMAKKAARWGNTQKG
Ga0208144_10143351	3300026040	Natural And Restored Wetlands	MDLTDEDAFPIYMRISDKVLHLRRLGMTYTNIAEHLGINPWMAKKAVRWGNVQKA
Ga0208287_10170141	3300026044	Natural And Restored Wetlands	MNEDAVPIYMKISEKALHLRRLGMTYPNIAERLGINPWMAKKAARWGNTQKG
Ga0256865_10063625	3300027657	Soil	VDLTDEDAVPTYMKISEKVLHLRRLGIPYAIIGERLGINRWLAMRAFRWAKDGYRKNQI
Ga0256865_10183351	3300027657	Soil	VDLTDIDAAPAYVKISEKVLHLRRLGMTYPNIAERLGINPWMAKKAARWGKSQTGKGETAVVTITAR
Ga0209514_100609612	3300027819	Groundwater	VDLTDEDAVPIYMRISDEVLHLRRLGMTYSNIAERLGINPWMAKKAARWGKIQKA
Ga0209514_101062952	3300027819	Groundwater	MDLTDEDAIPIYMKVSEKVLHLRRLGMTYPSICEHLGVNRWMALRATRWAKDGYRKNQI
Ga0209253_100262766	3300027900	Freshwater Lake Sediment	VDLTAEDAIPIYMRISDKVLHLRRLGMTYTNIAERLGINPWMAKKAARWRNIQKG
Ga0209253_102259054	3300027900	Freshwater Lake Sediment	VDLTDEDAIPIYMRISDKVLHLRRLGLTYTNIAECLGINPWMAKKAARWGNIQKA
Ga0265292_10025365	3300028028	Landfill Leachate	VNLTDEDAVPIYMKISEKVLHLRRLGMAYAIIAERLGVNLWMAKKAARWGMSR
Ga0299906_108420062	3300030606	Soil	VDLTDEDAVPVYMKISEKVLHLRRLGMTYTNIAEHLGINSWMAKKAARWGNIQQG
Ga0299915_107248291	3300030613	Soil	VIPIKVNLTDEDAIPVYRKVSEKVLHLRRLGMSYASIAERLRVNLWMAKRAARWGKIQKA
Ga0315288_106973773	3300031772	Sediment	VDLTDEDAIPAYVKISEKVLHFRRLGMSYTSISERLGVNLWMAKKAARW
Ga0315290_113612502	3300031834	Sediment	VNLTDEDAVPIYMRISNKVLHLRRLGMTYTNIAERLGINPWMAKKAARWGNIQKG
Ga0214473_100131678	3300031949	Soil	VNLTDEDAIPIYMKISEKVLHLRRLGMSYTGIAELLGVNLWMAKKAARWGKIQKA
Ga0214473_101408104	3300031949	Soil	VNLTDEDAIPVYMKISEKALHLRRLGVAYSNIAEHLGVNPWMAKKAARWGNIQKG
Ga0214473_115167792	3300031949	Soil	VNLTEEAAIPIYMKISEKVLHLRRLGISYANIADRIGVNLWMAKRAARWGNIQKA
Ga0214473_118169731	3300031949	Soil	DEDAIPAYMKISEKVLHLRRLGMPYATIAERLRVNLWMVKKAARRGRPPH
Ga0326597_1000026482	3300031965	Soil	VDLTDEDAVPVYMKISEKVLHLRRLGMTYTNIAEHLGINPWMAKKAARWSNIQKA
Ga0326597_107756742	3300031965	Soil	VNLPDEDAIPVYIKISEKVLHLRRLGMPFTSIAERLGINPWMAKKAARWGNIQKA
Ga0326597_109632401	3300031965	Soil	PIYMRISDKVLHLRRLGMTYTNIAERLGINPWMAKKAARWGNLQKS
Ga0315278_117427342	3300031997	Sediment	VDLTDEDAIPIYMRISDKVLHLLRLDMPYAIIAEHLGVNMWMAKKAARWGNIQKA
Ga0315283_108485171	3300032164	Sediment	LTDEDAVPIYMKISEKALHLHRLGMTYASISERLGINRWMVRKAVHWATTGHCKESEPLR
Ga0315268_108519502	3300032173	Sediment	VALTDEDAVPIYMKISEKVLHLRRLGMPYATIAERLKINLWMAQRAARWGNRNDRKLFPVVTLNH
Ga0315286_100740244	3300032342	Sediment	VDLADGDAIPAYVKISEKVLHLRRLGMGYINIGEHLGVNLWMADRAARWAKAHIK
Ga0315275_107813263	3300032401	Sediment	VDLTDEDAVPIYMRISEKVLHLHRLGMAYAIIAERLGVNLWMAKKAAR
Ga0334722_100003352	3300033233	Sediment	VDLTNEDAVPVYMRISDKVLHLRRLGITYTNIAERLGINPWMAKKAARWGNIQKA
Ga0334722_1000033570	3300033233	Sediment	MEMNLTDEDAIPIYMKISEKVLHLRRLGMDYASIAECLGVNLWMAKKAAHWGNTRQ
Ga0334722_100188842	3300033233	Sediment	VDLADEDATPIYMKISEKVLHLRRLGMPYARIAERLGVNLWMAKKAARSGRSRHNRGKNLSRQ
Ga0334722_100710273	3300033233	Sediment	MDADAVPIYMKISEKVLHLRRLGMPYANIADRLGINPWMAKKAARWGKPHRTPIHQ
Ga0334722_102230612	3300033233	Sediment	VELTDGDAVPIYVKISEKVFHLRRLGMGYASIAERLGVNLWMAKRSARWAKAHNKERESFSLMG
Ga0316605_101784243	3300033408	Soil	MDLTDEDAIPAYMKVSEKVLHLRRLGMSYPSIADRLGINPWMAKKAARWGNIQKA
Ga0299912_101714903	3300033489	Soil	DEDSIPVYIIIAGKVLHLRRLGMSIASIAEHLGVNLWMAKRAARWGKIHHKG
Ga0299912_111623681	3300033489	Soil	VALTDEDAFPAYVKTSEKVLHLRRLGIAFPGIAERLGVNPGMAKKAARWGNTQKA
Ga0373901_092995_202_363	3300034083	Sediment Slurry	VDLTDEDAVPTYVKTTDKVLHLRRLGMTYASIAECLGINLWMAKRAARWAKTR
Ga0373913_0160576_2_148	3300034089	Sediment Slurry	MDLTDEDAVPTYVKTTDKVLHLRRLGMTYASIAECLGINLWMAKRAARW
Ga0373910_0044326_521_682	3300034100	Sediment Slurry	MALTDEDTVPTYVKTTDKVLHLRRLGMTYASIAECLGINLWMAKRAARWAKTR
Ga0373910_0113502_426_611	3300034100	Sediment Slurry	VLTIEVNLTDDDAVPVYMKILEKVLHLRRLGMAYSSIAERLGVNVWMAKRAAHRAKRHHK
Ga0370498_013113_186_353	3300034155	Untreated Peat Soil	MDLTDEDAFPIYMKISEKVVHLRRLGLEYTNIAERLGINPWMAKKAARWGNIQKG
Ga0373909_0006108_299_484	3300034191	Sediment Slurry	VLTIEVNLTDEDAVPVYMKILEKVFHLRRLGMAYSSIAERLGVNVWMAKRAARRAKRHHK
Ga0364936_008837_1265_1426	3300034773	Sediment	VNLTDEDAIPVYIKISEKVLHLRRLGIPFTSIAERLGINPWMAKKAARWGRPH
Ga0364936_067286_111_278	3300034773	Sediment	LDLTDEDAIPIYMRISDKVLHLRRLGMTYTNIAERLGINPWMAKKAARWGNIQQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters