Metagenome / Metatranscriptome Family F067124

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067124
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	53 residues
Representative Sequence	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKGVEVIDGVKYYVFSI
Number of Associated Samples	91
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	37.30 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (74.603 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (31.746 % of family members)
Environment Ontology (ENVO)	Unclassified (91.270 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (75.397 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 1SI48aug10_120mDRAFT_10281171 2SI47jul10_150mDRAFT_10414741 3SI39no09_200mDRAFT_10499471 4SI47jul10_120mDRAFT_10640121 5LP_F_10_SI03_120DRAFT_10425792 6SI39nov09_100mDRAFT_10427453 7JGI24006J15134_100417624 8JGI24006J15134_102186381 9JGI24005J15628_100435085 10JGI26238J51125_10484511 11JGI26244J51143_10138252 12JGI26244J51143_10213874 13JGI26241J51128_10781742 14JGI26239J51126_10572631 15JGI26381J51731_10557531 16Ga0066606_102062491 17Ga0066616_10012652 18Ga0066616_10060213 19Ga0066621_11625612 20Ga0066615_10328792 21Ga0066615_10457723 22Ga0066628_12335661 23Ga0066627_13309292 24Ga0066851_100982712 25Ga0008649_101254293 26Ga0008649_101694622 27Ga0075441_100400174 28Ga0075441_102919532 29Ga0075441_103596051 30Ga0075443_100144992 31Ga0075443_101832382 32Ga0075446_101591302 33Ga0075445_100736314 34Ga0075445_103135572 35Ga0075448_102130222 36Ga0098040_10518382 37Ga0098053_10788762 38Ga0075444_100705324 39Ga0075444_102711172 40Ga0110931_10698592 41Ga0111541_104814031 42Ga0114995_102400671 43Ga0114995_103468762 44Ga0114995_106737851 45Ga0114996_101414853 46Ga0114996_104889722 47Ga0114996_111259211 48Ga0114993_101034224 49Ga0114993_106840003 50Ga0114993_106952451 51Ga0114994_101579813 52Ga0114994_108789032 53Ga0114997_101608891 54Ga0115003_105987122 55Ga0115003_107191191 56Ga0115002_108923951 57Ga0114999_105603651 58Ga0114999_105805721 59Ga0114999_110858522 60Ga0133547_119311682 61Ga0151674_11144302 62Ga0151677_10810114 63Ga0163179_102540922 64Ga0163179_117185211 65Ga0181390_11453722 66Ga0211545_100815373 67Ga0211579_100321483 68Ga0211547_105473051 69Ga0211541_100341433 70Ga0206677_104016281 71Ga0206682_104656321 72Ga0233428_10686853 73Ga0233429_12593151 74Ga0233429_13164401 75Ga0233433_103040831 76Ga0233427_101889011 77Ga0233436_10442543 78Ga0233436_11414202 79Ga0233440_11012113 80Ga0233440_11330201 81Ga0233441_11072283 82Ga0233439_102062411 83Ga0233434_11357423 84Ga0233445_11021641 85Ga0209337_12850272 86Ga0209556_10581192 87Ga0209658_10781042 88Ga0209662_11355321 89Ga0209041_11270201 90Ga0209657_11145332 91Ga0209362_11301793 92Ga0208451_10045662 93Ga0209384_10393411 94Ga0209384_10421042 95Ga0209383_10896591 96Ga0209554_10240752 97Ga0209815_10807122 98Ga0209192_100497143 99Ga0209192_103471321 100Ga0209709_100590062 101Ga0209709_101224553 102Ga0257118_11272291 103Ga0257123_10445352 104Ga0257123_11051631 105Ga0257117_11152281 106Ga0257119_10717101 107Ga0257116_10647881 108Ga0257126_12659031 109Ga0308021_101805172 110Ga0308022_11136512 111Ga0308025_10618092 112Ga0308025_12114501 113Ga0308025_12426281 114Ga0308025_12486361 115Ga0307488_103251771 116Ga0307488_104061182 117Ga0307488_107880401 118Ga0307492_100241531 119Ga0307989_10105762 120Ga0308014_11053771 121Ga0307995_11326822 122Ga0307995_11456882 123Ga0307995_11507821 124Ga0315330_103733502 125Ga0315333_100698384 126Ga0314858_024341_3_122
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 1SI48aug10_120mDRAFT_10281171 2SI47jul10_120mDRAFT_10640121 3JGI24006J15134_100417624 4Ga0008649_101694622 5Ga0075441_102919532 6Ga0075443_101832382 7Ga0111541_104814031 8Ga0114993_106840003 9Ga0163179_117185211 10Ga0209815_10807122 11Ga0308025_10618092 12Ga0307995_11326822
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 1SI48aug10_120mDRAFT_10281171 2SI47jul10_120mDRAFT_10640121 3JGI24006J15134_100417624 4Ga0008649_101694622 5Ga0075441_102919532 6Ga0075443_101832382 7Ga0111541_104814031 8Ga0114993_106840003 9Ga0163179_117185211 10Ga0209815_10807122 11Ga0308025_10618092 12Ga0307995_11326822
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 43.64% Coil/Unstructured: 56.36%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF01165	Ribosomal_S21	5.56
PF01180	DHO_dh	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	5.56
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.79
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.79
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	0.79
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.79
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	25.40 %
Unclassified	root	N/A	74.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	2.38 %
Unclassified	root	N/A	74.60 %
Viruses	superkingdom	All Organisms → Viruses	23.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
Unclassified	root	N/A	74.60 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.38 %
Unclassified	root	N/A	74.60 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
Unclassified	root	N/A	74.60 %

Name	Rank	Taxonomy	Distribution
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	2.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
Unclassified	root	N/A	74.60 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	2.38 %
Unclassified	root	N/A	74.60 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	2.38 %
Unclassified	root	N/A	74.60 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300022888\|Ga0233428_1068685	Not Available	1380	Open in IMG/M
(restricted) 3300022902\|Ga0233429_1259315	Not Available	586	Open in IMG/M
(restricted) 3300022902\|Ga0233429_1316440	Not Available	505	Open in IMG/M
(restricted) 3300022931\|Ga0233433_10304083	Not Available	654	Open in IMG/M
(restricted) 3300022933\|Ga0233427_10188901	Not Available	916	Open in IMG/M
(restricted) 3300024243\|Ga0233436_1044254	All Organisms → Viruses → Predicted Viral	1739	Open in IMG/M
(restricted) 3300024243\|Ga0233436_1141420	Not Available	729	Open in IMG/M
(restricted) 3300024258\|Ga0233440_1101211	Not Available	918	Open in IMG/M
(restricted) 3300024258\|Ga0233440_1133020	Not Available	753	Open in IMG/M
(restricted) 3300024260\|Ga0233441_1107228	Not Available	944	Open in IMG/M

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	5.56%
Inlet	Environmental → Aquatic → Marine → Inlet	15.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	18.25%
Oceanic	Environmental → Aquatic → Marine → Oceanic	34.92%
Strait	Environmental → Aquatic → Marine → Strait	0.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified	24.60%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.79%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	34.13%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	24.60%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	18.25%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	15.87%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	31.75%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	15.87%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	15.08%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.73%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	5.56%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.59%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.79%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.79%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	2.38%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	1.59%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	10.32%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.17%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.59%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.79%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000150	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 48 08/11/10 120m	Environmental	Open in IMG/M
3300000154	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 150m	Environmental	Open in IMG/M
3300000164	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 200m	Environmental	Open in IMG/M
3300000212	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 120m	Environmental	Open in IMG/M
3300000256	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - ample_F_10_SI03_120	Environmental	Open in IMG/M
3300000325	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 100m	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300003478	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA	Environmental	Open in IMG/M
3300003495	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNA	Environmental	Open in IMG/M

Showing 1 to 10 of 91 entries

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SI48aug10_120mDRAFT_10281171	3300000150	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKGVEVI
SI47jul10_150mDRAFT_10414741	3300000154	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEMIDGVKYYVLST*
SI39no09_200mDRAFT_10499471	3300000164	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTQPTHKVK
SI47jul10_120mDRAFT_10640121	3300000212	Marine	MKMPKRVINYRDRVTQQEYNVXSKIVSTRPTHKVKSVXXIDGVKYYVLST*
LP_F_10_SI03_120DRAFT_10425792	3300000256	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKGVEVIDGVEYYVF
SI39nov09_100mDRAFT_10427453	3300000325	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTQPTHKVKGVEVID
JGI24006J15134_100417624	3300001450	Marine	MKXSEMKRPXTIINYRDRVTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYYVLSF*
JGI24006J15134_102186381	3300001450	Marine	MKQSEMKRVKRVINYRDQMTQQEYNVDSKIVSTRPTHKVKGVEIIDGVEYYVLSI*
JGI24005J15628_100435085	3300001589	Marine	MKQSEMKRPKTIINYRDRVTQQEYNVDSKIVSTQPTHK
JGI26238J51125_10484511	3300003478	Marine	MKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKGVEVIDGVKYYVFSI*
JGI26244J51143_10138252	3300003495	Marine	MKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVKYYVLST*
JGI26244J51143_10213874	3300003495	Marine	MKMPKRVINYRDRVTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYYVFSI*
JGI26241J51128_10781742	3300003496	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVK
JGI26239J51126_10572631	3300003498	Marine	MKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVKYYVL
JGI26381J51731_10557531	3300003618	Marine	MKQSEMKRVKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSV
Ga0066606_102062491	3300004280	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKGVEVIDGVKYYVFSI*
Ga0066616_10012652	3300004637	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVEYYVFSI*
Ga0066616_10060213	3300004637	Marine	MKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEMIDGVKYYVLST*
Ga0066621_11625612	3300004638	Marine	MKQSEMKMPKRVINYRDQMTQQEYNVDSKIVSTRPTHKVKGVEVIDGVKYYVFSI*
Ga0066615_10328792	3300004640	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEMIDGVEYYVFSI*
Ga0066615_10457723	3300004640	Marine	CESMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEMIDGVKYYVLST*
Ga0066628_12335661	3300004968	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKGVEVIDGVEYYVFSI*
Ga0066627_13309292	3300005233	Marine	MKQSEMKRVKRVINYRDRVTQQEYNVDSKIVSTRPTHKVK
Ga0066851_100982712	3300005427	Marine	MKQSEMKRTKTVINYRDRVTQQEKNVDSKIVATRPTHKVKGVETIDGVEYYVLSI*
Ga0008649_101254293	3300005838	Marine	MKMPKRVINYRDRVTQQEYNVDSKIVSTQPTHKVKSVEMIDGVKYYVFSI*
Ga0008649_101694622	3300005838	Marine	YNYSVVSKKYGYNLLTRCESMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVKYYVLST*
Ga0075441_100400174	3300006164	Marine	VKETMKQSEMKRSKTIINYRDQVTQQEYNVDSKIVSTEPTHKVKSVEVIDGVEYYVLSMPTV*
Ga0075441_102919532	3300006164	Marine	MKETMKQSEMKRTKTIINYRDQMTQQEYNVDSKIVSSRPTHKFKRVEMIDGVKYYVTSF*
Ga0075441_103596051	3300006164	Marine	MKETMKQSEMKRPKNVINYRDQVTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYYVLSF*
Ga0075443_100144992	3300006165	Marine	MKQSEMKRPKNVINYRDQVTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYYVLSF*
Ga0075443_101832382	3300006165	Marine	MKETMKQSEMKRTKTIINYRDQMTQQEYNVDSKIVSSRPTHK
Ga0075446_101591302	3300006190	Marine	MKETMKQSEMKRTKTIINYRDQMTQQEYNVDSKIVSSRPTHKVKGVEVIDGVKYYVLSI*
Ga0075445_100736314	3300006193	Marine	MKQSEMKRTKTIINYRDQMTQQEYNVDSKIVSSRPTHKFKRVEMIDGVKYYVTSF*
Ga0075445_103135572	3300006193	Marine	MKQSEMKRVKRVINYRDQMTQQEYNVDSKIVSSRPTHKVKGV
Ga0075448_102130222	3300006352	Marine	MKETMKQSEMKRTKTIINYRDQMTQQEYNVDSKIVSSRPTHKFKRVEVIDGVKYYVTSF*
Ga0098040_10518382	3300006751	Marine	MKQSEMKRTKTVINYRDRVTQQEKNVDSKIVATRPTHKVKGVEVIDGVEYYVLSI*
Ga0098053_10788762	3300006923	Marine	MKQSEMKRTKTVINYRDRVTQQEKNVDSKIVATRPTHKVKGVETI
Ga0075444_100705324	3300006947	Marine	MKQSEMKRPKNVINYRDQMTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYYVLSF*
Ga0075444_102711172	3300006947	Marine	MKQSEMKRVKRVINYRDQMTQQEYNVDSKIVSSRPTHKVKGVEVIDGV
Ga0110931_10698592	3300007963	Marine	MKRNEMRKPKTIINYRDRVTQQEKNVDSRIVSTRPTHKVKGVEVIDGVEYYVLSV*
Ga0111541_104814031	3300008097	Marine	MMNPFGVTMKRNEMRKPKTIINYRDRVTQQEKNVDSRMVSTRPTHKVKGVEVIDGVEYYVLSV*
Ga0114995_102400671	3300009172	Marine	MKQSEMKRVKRVINYRDQMTQQEYNVDSKIVSTRPTHKVKSVEIIDGVEYYVL
Ga0114995_103468762	3300009172	Marine	MKQSEMKRVKRVINYRDQMTQQEYNVDSKIVSTRSTHKVKGVEVIDGVEYYVLSI*
Ga0114995_106737851	3300009172	Marine	QSEMKRVKRVINYRDQMTQQEYNVDSKIVSTRPTHKVKGVEIIDGVEYYVLSI*
Ga0114996_101414853	3300009173	Marine	MKQSEMKKVKRVINYRDQMTQQEYNVDSKIVSTRSTHKVKGVEVIDGVEYYVLSI*
Ga0114996_104889722	3300009173	Marine	MKQSEMKRPKNVINYRDRVTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYYVLSF*
Ga0114996_111259211	3300009173	Marine	MKQSEMKRPKRVINYRDRMTQQEYNVDSKIVSTQPTHKVKGVEVIDGVEYYVLSI*
Ga0114993_101034224	3300009409	Marine	MKRPKRVINYRDRMTQQEYNVDSKIVSTQPTHKVKGVEVIDGVEYYVLSI*
Ga0114993_106840003	3300009409	Marine	MKMPKTPINYRDRVTAQERYVDNKRVSEEPTHKVTGVEWIDGKKYYVSSL*
Ga0114993_106952451	3300009409	Marine	MKRVKRVINYRDQMTQQEYNVDSKIVSTRPTHKVKSVEVIDGVKYYVLST*
Ga0114994_101579813	3300009420	Marine	MKQSEMKRVKRVINYRDQMTQQEYNVDSKIVSTRPT
Ga0114994_108789032	3300009420	Marine	MKMPKTPINYRDRVTAQERYVDNKRVSEEPTHKITGVEWIDGKKYYVASL*
Ga0114997_101608891	3300009425	Marine	MKQSEMKRVKRVINYRDQMTQQEYNVDSKIVSTQPTHKVKGVEIIDGVEYYVLSI*
Ga0115003_105987122	3300009512	Marine	MKQSEMKRVKRVINYRDQMTQQEYNVDSKIVSTRPTHKVNGVEIIDGVEYYVLS
Ga0115003_107191191	3300009512	Marine	MKQSEMKRVKRVINYRDQMTQQEYNVDSKIVSTQPTHKVKG
Ga0115002_108923951	3300009706	Marine	MKQSEMKRPKNGINYRDRVTQQEYNVDSKIVSTEPTHKIKGVEVIDGVKYYVLSF*
Ga0114999_105603651	3300009786	Marine	MKQSEMKRPKTIINYRDRVTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYY
Ga0114999_105805721	3300009786	Marine	KETMKQSEMKKVKRVINYRDQMTQQEYNVDSKIVSTRSTHKVKGVEVIDGVEYYVLLI*
Ga0114999_110858522	3300009786	Marine	MKQSEMKRPKNVINYRDRVTQQEYNVDSKIVSTEPTHKIKGVEVIDGVKYYVLSF*
Ga0133547_119311682	3300010883	Marine	MKQSEMKRPKTIINYRDRVTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYYVLSF*
Ga0151674_11144302	3300011252	Marine	MKESMKQSEMKKVKRVINYRDQMTQQEKNVDSKIVSTRSTHKVKRVEEIDGVKYYVLSI*
Ga0151677_10810114	3300011258	Marine	MKESMKQSEMKRVKRVINYRDQMTQQEKNVDSKIVSTRSTHKVKRVEEIDGVKYYVLSI*
Ga0163179_102540922	3300012953	Seawater	MSMNPFGVTMKRNEMRKPKTIINYRDRVTQQEKNVDSRIVSTRPTHKVKGVEVIDGVEDYVLSV*
Ga0163179_117185211	3300012953	Seawater	MMMMNLYGMSMKQSEMKKVKRVINYRDQMTQQEKNVDSKIVSTRSTHKVKRVEEIDGVKYYVLSI*
Ga0181390_11453722	3300017719	Seawater	MKQSEMKRTKTVINYRDRVTQQEKNVDSKIVATRPTHKVKGVEV
Ga0211545_100815373	3300020452	Marine	MNLYGMSMKQSEMKKVKRVINYRDQMTQQEKNVDSKIVSTRSTHKVKRVEEIDGVKYYVLSI
Ga0211579_100321483	3300020472	Marine	MMNPFGVTMKRNEMRKPKTIINYRDRVTQQEKNVDSRIVSTRPTHKVKGVEVIDGVEYYVLSV
Ga0211547_105473051	3300020474	Marine	MKRNEMRKPKTIINYRDRVTQQEKNVDSRIVSTRPTHKVKGVEVIDGVEYYVLSV
Ga0211541_100341433	3300020475	Marine	MMMNLYGMSMKQSEMKKVKRVINYRDQMTQQEKNVDSKIVSTRSTHKVKRVEEIDGVKYYVLSI
Ga0206677_104016281	3300021085	Seawater	MKQSEMKRTKTVINYRDRVTQQEKNVDSKIVATRPTHKVKGVETIDGVEYYVLSI
Ga0206682_104656321	3300021185	Seawater	MKQSEMKRPKTIINYRDRVTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYYVLSF
(restricted) Ga0233428_10686853	3300022888	Seawater	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVETIDGVEYYVLSI
(restricted) Ga0233429_12593151	3300022902	Seawater	MKQSEMKRVKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVETIDGVEYYVFSI
(restricted) Ga0233429_13164401	3300022902	Seawater	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTQPTHKVKSVEVIDGVKYYVFSI
(restricted) Ga0233433_103040831	3300022931	Seawater	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVEYYVFSI
(restricted) Ga0233427_101889011	3300022933	Seawater	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVEYY
(restricted) Ga0233436_10442543	3300024243	Seawater	ESMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVKYYVLST
(restricted) Ga0233436_11414202	3300024243	Seawater	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVE
(restricted) Ga0233440_11012113	3300024258	Seawater	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVETIDG
(restricted) Ga0233440_11330201	3300024258	Seawater	ETMKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKGVEVIDGVKYYVFSI
(restricted) Ga0233441_11072283	3300024260	Seawater	MKQSEMKRVKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVEYY
(restricted) Ga0233439_102062411	3300024261	Seawater	MKQSEMKRVKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKGVEVIDGV
(restricted) Ga0233434_11357423	3300024327	Seawater	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVETI
(restricted) Ga0233445_11021641	3300024339	Seawater	MKQSEMKRVKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKGVEVIDGVKYYVFSI
Ga0209337_12850272	3300025168	Marine	MKQSEMKRVKRVINYRDQMTQQEYNVDSKIVSTRPTHK
Ga0209556_10581192	3300025547	Marine	QSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVETIDGVEYYVLSI
Ga0209658_10781042	3300025592	Marine	MKQSEMKRVKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKGVEVIDGVKYYVF
Ga0209662_11355321	3300025596	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKGVEVIDGVKYYVFSI
Ga0209041_11270201	3300025623	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKGVEVIDGVEYYVFSI
Ga0209657_11145332	3300025676	Marine	MKMPKRVINYRDRVTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYYVFSI
Ga0209362_11301793	3300025770	Marine	KRVKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVEYYVFSI
Ga0208451_10045662	3300026103	Marine Oceanic	MKQSEMKRPKNVINYRDQVTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYYVLSF
Ga0209384_10393411	3300027522	Marine	MKETMKQSEMKRPKNVINYRDQVTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYYVLSF
Ga0209384_10421042	3300027522	Marine	MKETMKQSEMKRTKTIINYRDQMTQQEYNVDSKIVSSRPTHKFKRVEMIDGVKYYVTSF
Ga0209383_10896591	3300027672	Marine	MKETMKQSEMKRPKNVINYRDQMTQQEYNVDSKIVSTQPTHKVKGVEVIDGVKYYVLSF
Ga0209554_10240752	3300027685	Marine	MKQSEMKRTKTIINYRDQMTQQEYNVDSKIVSSRPTHKFKRVEMIDGVKYYVTSF
Ga0209815_10807122	3300027714	Marine	MKQSEMKRSKTIINYRDQVTQQEYNVDSKFVSTEPTHKVKSVEVIDGVEYYVLSMPTVXFYFNL
Ga0209192_100497143	3300027752	Marine	MKQSEMKKVKRVINYRDQMTQQEYNVDSKIVSTRSTHKVKGVEVIDGVEYYVLSI
Ga0209192_103471321	3300027752	Marine	MKQSEMKRPKRVINYRDRMTQQEYNVDSKIVSTQPTHKVKGVEVIDGVEYYVLSI
Ga0209709_100590062	3300027779	Marine	MKMPKTPINYRDRVTAQERYVDNKRVSEEPTHKITGVEWIDGKKYYVASL
Ga0209709_101224553	3300027779	Marine	MKRPKRVINYRDRMTQQEYNVDSKIVSTQPTHKVKGVEVIDGVEYYVLSI
Ga0257118_11272291	3300028173	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVETIDGVEYYVFSI
Ga0257123_10445352	3300028174	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVKYYVFSI
Ga0257123_11051631	3300028174	Marine	MKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVKYYVLST
Ga0257117_11152281	3300028175	Marine	LLTRCESMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVKYYVLST
Ga0257119_10717101	3300028274	Marine	MKQSEMKRVKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEMIDGVKYYVLST
Ga0257116_10647881	3300028277	Marine	MKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVEY
Ga0257126_12659031	3300028287	Marine	KENMKQSEMKMPKRVINYRDRVTQQEYNVDSKIVSTQPTHKVKSVEVIDGVKYYVFSI
Ga0308021_101805172	3300031141	Marine	MKETMKQSEMKRPKNVINYRDQVTQQEYNVDSKIVSTQPT
Ga0308022_11136512	3300031142	Marine	MSQXXTLVKETMKQSEMKRSKTIINYRDQVTQQEYNVDSKFVSTEPTHKVKSVEVIDGVEYYVLSMPTVXFYFNL
Ga0308025_10618092	3300031143	Marine	MNLHREMIEMKMPKTIINYRDQVTQQEFNVDSKIVSTRPTHKVKRVEVIDGVEYYVLSMPAV
Ga0308025_12114501	3300031143	Marine	MKQSEMKRSKTIINYRDQVTQQEYNVDSKIVSTEPTHKVKSVEVIDGVEYYVLSMPTVXFYFNL
Ga0308025_12426281	3300031143	Marine	MKRVKRVINYRDQMTQQEYNVDSKIVSSRPTHKVKGVEVIDGVKYYVLSI
Ga0308025_12486361	3300031143	Marine	MKETMKQSEMKRSKTIINYRDQVTQQEYNVDSKFVSTEPTHKVKSVEVIDGVEYYVLSMPTVXFYFNL
Ga0307488_103251771	3300031519	Sackhole Brine	MKQSEMKRVKRVINYRDQMTQQEYNVDSKIVSTQPTHKVKSVEVIDGVEYYVFSI
Ga0307488_104061182	3300031519	Sackhole Brine	MKRPKRVINYRDRMTQQEYNVDSKIVSTQPTHKVKGVEVIDGVE
Ga0307488_107880401	3300031519	Sackhole Brine	MKQSEMKRVKRVINYRDQMTQQEYNVDSKIVSTRPTHKVKGVEIIDGVEYYVLSI
Ga0307492_100241531	3300031523	Sea-Ice Brine	MKQSEMKKVKRVINYRDQMTQQEYNVDSKIVSTRSTHKV
Ga0307989_10105762	3300031603	Marine	MMNLHREMIEMKMPKTIINYRDQVTQQEYNVDSKIVSTRPTHKVKSVEVIDGVEYYVLSMPSV
Ga0308014_11053771	3300031628	Marine	MKQSEMKRTKTIINYRDQMTQQEYNVDSKIVSSRPTHKFKRVEVIDGV
Ga0307995_11326822	3300031696	Marine	MPKTIINYRDQVTQQEFNVDSKIVSTRPTHKVKRVEVIDGV
Ga0307995_11456882	3300031696	Marine	MMNLHREMXMKLPKTIINYRDQVTQQEFNVDSKIVSTRPTHKVKRVEVIDGVEYYVLSMPAV
Ga0307995_11507821	3300031696	Marine	SEMKRVKRVINYRDQMTQQEYNVDSKIVSSRPTHKVKGVEVIDGVKYYVLSI
Ga0315330_103733502	3300032047	Seawater	MKQSEMKRTKTVINYRDRVTQQEKNVDSKIVATRPTHKVKGVEVIDGVEYYVLSI
Ga0315333_100698384	3300032130	Seawater	MKQSEMKRTKTVINYRDRVTQQEKNVDSKIVATRPTHKVKG
Ga0314858_024341_3_122	3300033742	Sea-Ice Brine	MKQSEMKKVKRVINYRDQMTQQEYNVDSKIVSTRSTHKVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters