Metagenome / Metatranscriptome Family F064906

Basic Information
Family ID	F064906
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	42 residues
Representative Sequence	YTRALIELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Number of Associated Samples	111
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.91 %
% of genes near scaffold ends (potentially truncated)	96.09 %
% of genes from short scaffolds (< 2000 bps)	90.62 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (89.844 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.906 % of family members)
Environment Ontology (ENVO)	Unclassified (30.469 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.062 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.86% β-sheet: 0.00% Coil/Unstructured: 67.14%
Feature Viewer

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Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF03668	ATP_bind_2	59.38
PF05643	DUF799	3.91
PF01769	MgtE	3.91
PF08007	JmjC_2	3.91
PF00587	tRNA-synt_2b	3.91
PF02482	Ribosomal_S30AE	3.91
PF04552	Sigma54_DBD	3.12
PF04963	Sigma54_CBD	2.34
PF00005	ABC_tran	1.56
PF12686	DUF3800	1.56
PF01807	zf-CHC2	0.78
PF00908	dTDP_sugar_isom	0.78
PF02776	TPP_enzyme_N	0.78
PF00593	TonB_dep_Rec	0.78
PF12399	BCA_ABC_TP_C	0.78
PF03968	LptD_N	0.78
PF01380	SIS	0.78
PF16068	DUF4810	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1660	RNase adaptor protein RapZ for GlmZ sRNA degradation, contains a P-loop ATPase domain	Signal transduction mechanisms [T]	59.38
COG1508	DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog	Transcription [K]	5.47
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	3.91
COG1824	Permease, similar to cation transporters	Inorganic ion transport and metabolism [P]	3.91
COG2239	Mg/Co/Ni transporter MgtE (contains CBS domain)	Inorganic ion transport and metabolism [P]	3.91
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	3.91
COG4380	Uncharacterized conserved protein, DUF799 domain	Function unknown [S]	3.91
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	0.78
COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme	Cell wall/membrane/envelope biogenesis [M]	0.78

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.84 %
Unclassified	root	N/A	10.16 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.84 %
Unclassified	root	N/A	10.16 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.84 %
Unclassified	root	N/A	10.16 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.28 %
Unclassified	root	N/A	10.16 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	23.44 %
Unclassified	root	N/A	10.16 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.16 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	3.91 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	3.12 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.16 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	3.91 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	3.12 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.16 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	3.91 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	3.12 %
Sapientia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Sapientia	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.16 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	3.91 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3.12 %
Sapientia aquatica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Sapientia → Sapientia aquatica	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003331\|Ga0006572J49612_1160275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	550	Open in IMG/M
3300005072\|Ga0070923_1837658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	733	Open in IMG/M
3300005175\|Ga0066673_10830160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	527	Open in IMG/M
3300005179\|Ga0066684_10913026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	572	Open in IMG/M
3300005332\|Ga0066388_102484531	All Organisms → cellular organisms → Bacteria → Proteobacteria	941	Open in IMG/M
3300005344\|Ga0070661_100443627	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300005435\|Ga0070714_101163034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	752	Open in IMG/M
3300005444\|Ga0070694_100970852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	704	Open in IMG/M
3300005529\|Ga0070741_10637159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	947	Open in IMG/M
3300005530\|Ga0070679_100988929	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005538\|Ga0070731_10878695	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005538\|Ga0070731_11190098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	503	Open in IMG/M
3300005549\|Ga0070704_102086924	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300005614\|Ga0068856_101989623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	591	Open in IMG/M
3300005844\|Ga0068862_101505355	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005921\|Ga0070766_10442977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	856	Open in IMG/M
3300005994\|Ga0066789_10439479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Sapientia → Sapientia aquatica	545	Open in IMG/M
3300006176\|Ga0070765_100976499	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300006354\|Ga0075021_10734952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	635	Open in IMG/M
3300006578\|Ga0074059_11766639	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300006806\|Ga0079220_11984710	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300006894\|Ga0079215_10297049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	889	Open in IMG/M
3300009545\|Ga0105237_11914308	Not Available	601	Open in IMG/M
3300010159\|Ga0099796_10522022	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300010373\|Ga0134128_12728509	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300010376\|Ga0126381_101433046	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300012357\|Ga0137384_10276179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1400	Open in IMG/M
3300012917\|Ga0137395_10984973	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300012918\|Ga0137396_10240113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1335	Open in IMG/M
3300012922\|Ga0137394_10384392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1197	Open in IMG/M
3300012940\|Ga0164243_10856548	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012988\|Ga0164306_10821695	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300016270\|Ga0182036_10125475	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300016341\|Ga0182035_10460137	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300016341\|Ga0182035_11503910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	606	Open in IMG/M
3300016357\|Ga0182032_10014903	All Organisms → cellular organisms → Bacteria	4355	Open in IMG/M
3300016357\|Ga0182032_10976484	Not Available	723	Open in IMG/M
3300016387\|Ga0182040_11804192	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300016422\|Ga0182039_12038641	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300016445\|Ga0182038_10169619	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300017927\|Ga0187824_10033496	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300017927\|Ga0187824_10210285	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300017930\|Ga0187825_10097888	All Organisms → cellular organisms → Bacteria → Proteobacteria	1014	Open in IMG/M
3300017961\|Ga0187778_10625818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	723	Open in IMG/M
3300020170\|Ga0179594_10010156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2596	Open in IMG/M
3300021088\|Ga0210404_10462406	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300021088\|Ga0210404_10588086	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300021405\|Ga0210387_10361259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1284	Open in IMG/M
3300021406\|Ga0210386_10374002	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300021433\|Ga0210391_10128898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1992	Open in IMG/M
3300021444\|Ga0213878_10226853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	790	Open in IMG/M
3300021476\|Ga0187846_10282012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	688	Open in IMG/M
3300021478\|Ga0210402_12031843	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300022903\|Ga0247774_1009953	All Organisms → cellular organisms → Bacteria → Proteobacteria	3467	Open in IMG/M
3300023270\|Ga0247784_1045488	Not Available	1066	Open in IMG/M
3300023270\|Ga0247784_1128616	Not Available	654	Open in IMG/M
3300025911\|Ga0207654_11119684	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300025914\|Ga0207671_10866709	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300025929\|Ga0207664_10298705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1416	Open in IMG/M
3300025941\|Ga0207711_12126526	Not Available	504	Open in IMG/M
3300025942\|Ga0207689_10351611	All Organisms → cellular organisms → Bacteria → Proteobacteria	1225	Open in IMG/M
3300025949\|Ga0207667_10199948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2050	Open in IMG/M
3300025986\|Ga0207658_11555217	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300026298\|Ga0209236_1248407	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300026300\|Ga0209027_1143800	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300026701\|Ga0208577_101273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300027109\|Ga0208603_1031348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300027388\|Ga0208995_1003184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2676	Open in IMG/M
3300027587\|Ga0209220_1016570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1963	Open in IMG/M
3300027616\|Ga0209106_1010819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1917	Open in IMG/M
3300027669\|Ga0208981_1027321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1458	Open in IMG/M
3300027821\|Ga0209811_10292520	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300027826\|Ga0209060_10579002	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300027869\|Ga0209579_10153057	Not Available	1230	Open in IMG/M
3300028380\|Ga0268265_10463755	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300028877\|Ga0302235_10345463	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300028906\|Ga0308309_11660345	Not Available	543	Open in IMG/M
3300029997\|Ga0302302_1126333	Not Available	1018	Open in IMG/M
3300030503\|Ga0311370_12244550	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300030520\|Ga0311372_10433040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1972	Open in IMG/M
3300030743\|Ga0265461_10764414	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300030862\|Ga0265753_1051081	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031057\|Ga0170834_103622103	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031507\|Ga0307509_10797416	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300031544\|Ga0318534_10034049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2795	Open in IMG/M
3300031544\|Ga0318534_10272186	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300031544\|Ga0318534_10793498	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300031681\|Ga0318572_10832575	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031723\|Ga0318493_10860334	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031724\|Ga0318500_10164181	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300031748\|Ga0318492_10119589	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300031748\|Ga0318492_10788190	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300031751\|Ga0318494_10570413	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300031753\|Ga0307477_11129570	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300031754\|Ga0307475_11034113	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300031769\|Ga0318526_10273145	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300031778\|Ga0318498_10516348	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031778\|Ga0318498_10542862	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300031796\|Ga0318576_10069268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1565	Open in IMG/M
3300031798\|Ga0318523_10039908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2168	Open in IMG/M
3300031805\|Ga0318497_10392963	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300031819\|Ga0318568_10652659	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300031823\|Ga0307478_10356771	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300031835\|Ga0318517_10536052	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300031845\|Ga0318511_10130624	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300031896\|Ga0318551_10010999	All Organisms → cellular organisms → Bacteria	3932	Open in IMG/M
3300031896\|Ga0318551_10646203	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300031897\|Ga0318520_10542263	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300031910\|Ga0306923_10106403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3170	Open in IMG/M
3300031941\|Ga0310912_10707608	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300031962\|Ga0307479_10677120	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300032044\|Ga0318558_10137754	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300032044\|Ga0318558_10353679	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300032054\|Ga0318570_10281723	Not Available	755	Open in IMG/M
3300032065\|Ga0318513_10045446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1951	Open in IMG/M
3300032065\|Ga0318513_10156686	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300032065\|Ga0318513_10553159	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300032074\|Ga0308173_11584512	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300032091\|Ga0318577_10597955	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300032805\|Ga0335078_10004211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	21348	Open in IMG/M
3300032805\|Ga0335078_11426646	Not Available	780	Open in IMG/M
3300032896\|Ga0335075_10143648	Not Available	2997	Open in IMG/M
3300032896\|Ga0335075_10777644	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300032896\|Ga0335075_11230423	Not Available	647	Open in IMG/M
3300032955\|Ga0335076_10568035	Not Available	1017	Open in IMG/M
3300033158\|Ga0335077_12147784	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300033289\|Ga0310914_10525177	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300033829\|Ga0334854_002994	All Organisms → cellular organisms → Bacteria → Proteobacteria	4127	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.06%
Host-Associated	Host-Associated	9.38%
Engineered	Engineered	1.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.94%
Plants	Host-Associated → Plants	9.38%
Aquatic	Environmental → Aquatic	3.12%
Solid Waste	Engineered → Solid Waste	0.78%
Lab Enrichment	Engineered → Lab Enrichment	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.69%
Peat	Environmental → Terrestrial → Peat	3.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.91%
Freshwater	Environmental → Aquatic → Freshwater	2.34%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.34%
Sediment	Environmental → Aquatic → Sediment	0.78%
Cave	Environmental → Terrestrial → Cave	0.78%
Roots	Host-Associated → Plants → Roots	0.78%
Zoo Waste	Engineered → Solid Waste → Zoo Waste	0.78%
Defined Media	Engineered → Lab Enrichment → Defined Media	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.38%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.34%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%
Composting	Engineered → Solid Waste → Zoo Waste → Composting	0.78%
Unclassified	Engineered → Lab Enrichment → Defined Media → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.12%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.34%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%
Unclassified	Engineered → Solid Waste → Zoo Waste → Composting → Unclassified	0.78%
Unclassified	Engineered → Lab Enrichment → Defined Media → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.03%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.12%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.34%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.78%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.78%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%
Compost	Engineered → Solid Waste → Zoo Waste → Composting → Unclassified → Compost	0.78%
Ionic Liquid And High Solid Enriched	Engineered → Lab Enrichment → Defined Media → Unclassified → Unclassified → Ionic Liquid And High Solid Enriched	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003331	Ionic liquid and high solid enriched microbial communities from the Joint BioEnergy Institute, USA - AR20-2-R (Metagenome Metatranscriptome, Counting Only)	Engineered	Open in IMG/M
3300005072	Compost microbial communities from Sao Paulo Zoo, Brazil - Zoo Compost 4 - DAY 64 soap2	Engineered	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012940	Organic Plus compost microbial communities from Emeryville, California, USA - Original compost - Organic plus compost (OP)	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022903	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L001-104B-6	Environmental	Open in IMG/M
3300023270	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026701	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN407 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0006572J49612_11602752	3300003331	Ionic Liquid And High Solid Enriched	RELIELGYRDAMEARDELLAFMSGEKVPPAIATPTVAETSEAT*
Ga0070923_18376581	3300005072	Compost	YTRELIELGYRDAMEARDELLAFMSGEKVPPAIATPTVAETSEAT*
Ga0066673_108301601	3300005175	Soil	GYTRALIELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT*
Ga0066684_109130261	3300005179	Soil	LMFEAGYTRALIELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT*
Ga0066388_1024845311	3300005332	Tropical Forest Soil	YTRALIELGYRDAMEARSALVAFMGGEKLPQVMTAAGVAQAT*
Ga0070661_1004436271	3300005344	Corn Rhizosphere	ESGYTRELIELGYRDAMEAREALDAFMSGEKTPQVVATSPGVVAQAT*
Ga0070714_1011630342	3300005435	Agricultural Soil	ALIELGYRDAMEARAALVAFMSGERLPPLMTAAGVAQAT*
Ga0070694_1009708521	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	AGYTRALIELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT*
Ga0070741_106371592	3300005529	Surface Soil	SGYTRALIELGYRDAMEARAAILAFMSGEKLPPVLTSPGVAQAT*
Ga0070679_1009889292	3300005530	Corn Rhizosphere	ALIELGYRDAMEARTPLLAFMGGEKLPQVMTAPGVAQVT*
Ga0070731_108786951	3300005538	Surface Soil	RALIELGYRDAMDARAAIMAFMSGEKLPPVLTSPGVAQAT*
Ga0070731_111900982	3300005538	Surface Soil	FESGYTRALIELGYRDAMDARAAIIAFMSGEKLPPVLTSPGVAQAT*
Ga0070704_1020869241	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	TRAMIELGYRDAMQARTALVAFMSGEKLPHVMTAPGVAQAT*
Ga0068856_1019896231	3300005614	Corn Rhizosphere	ESGYTRALIELGYRDAMEARAAIMAFMSGEKLPPVLTSPGVAQAT*
Ga0068862_1015053552	3300005844	Switchgrass Rhizosphere	LIELGYRDATEARSTLLAFMSGEKTPQAAAAPGVVAQAT*
Ga0070766_104429771	3300005921	Soil	TRALIELGYRDAMEARAALQAFMEGEKLPQVMTAAGVAQAT*
Ga0066789_104394792	3300005994	Soil	GYTRELIELGYKDAMEARTTLLAFMTGEALPSVITAAGVTQAT*
Ga0070765_1009764992	3300006176	Soil	GYTRALIELGYRDAMEARAAIMAFMSGEKLPPVLTSPGVAQAT*
Ga0075021_107349521	3300006354	Watersheds	GYTRALIELGYRDAMEARSALTAFMSGEKLPQVMTAAGVAQAT*
Ga0074059_117666392	3300006578	Soil	LVELGYRDAMQARTALVAFMSGEKLPHVMTAPGVAQAT*
Ga0079220_119847101	3300006806	Agricultural Soil	LIELGYRDAMEARSALVAFMSGERLPPLMTAAGVAQAT*
Ga0079215_102970492	3300006894	Agricultural Soil	FESSYTRELIELGYRDAMEARTTLVAFMSGENLPSVVTAPGVAQAT*
Ga0105237_119143082	3300009545	Corn Rhizosphere	ELIELGYRDAMEARGALDAFMSGEKTPQVVDTAPGVVAQAT*
Ga0099796_105220222	3300010159	Vadose Zone Soil	VKHLIELGYRDAMEARSALLAFMSGEKLPQVMTAAGVAQAT*
Ga0134128_127285092	3300010373	Terrestrial Soil	YLTFESGYTRALIELGYRDAMEARAAIMAFMSGEKLPPVLTSPGVAQAT*
Ga0126381_1014330461	3300010376	Tropical Forest Soil	AGYTRALIELGYRDAMEARGALLAFMSGERLPGVMTAAGVAQAT*
Ga0137384_102761791	3300012357	Vadose Zone Soil	ALIELGYRDAMEARGGITAFMSGEKLPTVMTAAGVAQAT*
Ga0137395_109849732	3300012917	Vadose Zone Soil	FEAGYTRALIELGYRDAMEARSALLAFMSGEKLPQVMTAAGVAQAT*
Ga0137396_102401131	3300012918	Vadose Zone Soil	ALIELGYRDAMEARAALTAFMSGEKLPQVMTAAGVAQAT*
Ga0137394_103843921	3300012922	Vadose Zone Soil	ALIELGYRDAMEARSALTAFMSGEKLPQVMTAAGVAQAT*
Ga0164243_108565481	3300012940	Compost	TRELIELGYRDAMEARCALRAFVTGEQLPSLLTSPGVAQAT*
Ga0164306_108216952	3300012988	Soil	YTRAMIELGYRDAMQARTALVAFMSGEKLPHVMTAPGVAQAT*
Ga0182036_101254751	3300016270	Soil	ELGYRDAMEARSALVAFMGGEKLPQLMTAAGVAQAT
Ga0182035_104601371	3300016341	Soil	ESGYTRALIELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0182035_115039103	3300016341	Soil	ALIELGYRDAMEARAALMAFMGGEKLPQVMTAAGVAQAT
Ga0182032_100149036	3300016357	Soil	FEAGYTRALIELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT
Ga0182032_109764842	3300016357	Soil	ELGYRDAMEVQPALLAFMSGERSPPVLTAPVVAQST
Ga0182040_118041921	3300016387	Soil	YTRALIELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0182039_120386412	3300016422	Soil	LIELGYRDAMEARAALMAFMSGEKLPQLMTAAAVAQVSS
Ga0182038_101696194	3300016445	Soil	RALIELGYRDAMEARSALVAFMGGEKLPQVMTAAGVAQAT
Ga0187824_100334964	3300017927	Freshwater Sediment	YTRALIELGYRDAMEARTPLLAFMGGEKLPQVMTASGVAQVT
Ga0187824_102102851	3300017927	Freshwater Sediment	SGYTRALIELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT
Ga0187825_100978881	3300017930	Freshwater Sediment	SGYTRALIELGYRDAMEARTALLAFMGGEKLPQMLTASGVAQLT
Ga0187778_106258181	3300017961	Tropical Peatland	GYTRALIELGYRDAMEARSALVAFMSGARLPAVLTAPGVAQAT
Ga0179594_100101564	3300020170	Vadose Zone Soil	LIELGYRDAMEARSALTAFMSGEKLPQVMTAAGVAQAT
Ga0210404_104624062	3300021088	Soil	MFEAGYTRALIELGYRDAMEARSALTAFMSGEKLPQVMTAAGVAQAT
Ga0210404_105880861	3300021088	Soil	ALIELGYRDAMEARAAIMAFMSGEKLPPVLTSPGVAQATS
Ga0210387_103612593	3300021405	Soil	AYTRALIELGYRDAMQARTALIAFMSGERLPQVMTSPGVAQVT
Ga0210386_103740023	3300021406	Soil	LIELGYRDAMQARAAIMAFMSGEKLPPVMTSPGVAQAT
Ga0210391_101288981	3300021433	Soil	AAYTRALIELGYRDAMQARTALIAFMSGERLPQVMTSPGVAQVT
Ga0213878_102268532	3300021444	Bulk Soil	ALIELGYRDAMEARGALVAFMSGARLPAVLTAPGVAQAT
Ga0187846_102820121	3300021476	Biofilm	LIFEAGYTRALIELGYRDAMEARSALVAFMSGARLPAVLTAPGVAQAT
Ga0210402_120318431	3300021478	Soil	GYTRALIELGYRDAMEARLPLTAFMSGEKLPQVMTAAGVAQAT
Ga0247774_10099531	3300022903	Plant Litter	RDLIQLGYRDAMEARTCLLAFVQGETLPSVMTSPGVAQAT
Ga0247784_10454881	3300023270	Plant Litter	ELIELGYKDAMEARTALLAFIEGETLPKVMTSAGVAQAT
Ga0247784_11286162	3300023270	Plant Litter	TRELIELGYKDAMEARTALLAFIEGETLPKVMTSAGVAQAT
Ga0207654_111196842	3300025911	Corn Rhizosphere	YLMFEAGYTRAMIELGYRDAMQARTALVAFMSGEKLPHVMTAPGVAQAT
Ga0207671_108667091	3300025914	Corn Rhizosphere	IELGYRDAMEAREALDAFMSGEKTPQVVAKAPGVVAQAT
Ga0207664_102987053	3300025929	Agricultural Soil	TRALIELGYRDAMEARAALVAFMSGERLPPLMTAAGVAQAT
Ga0207711_121265262	3300025941	Switchgrass Rhizosphere	ELIELGYRDAMEARGALDAFMSGEKTPQVVDTAPGVVAQAT
Ga0207689_103516112	3300025942	Miscanthus Rhizosphere	MFESGYTRELIELGYKDAMDARCALNAFVMGEQLPSVITSPGVAQAT
Ga0207667_101999485	3300025949	Corn Rhizosphere	YRDAMEAREALDAFMSGEKTPQVVATSPGVVAQAT
Ga0207658_115552171	3300025986	Switchgrass Rhizosphere	GYRDAMEAREALDAFMSGEKTPQVVATSPGVVAQAT
Ga0209236_12484071	3300026298	Grasslands Soil	ELGYRDAMEARGGITAFMSGEKLPTVMTAAGVAQAT
Ga0209027_11438002	3300026300	Grasslands Soil	GYTRALIELGYRDAMEARSALTAFMCGEKLPQVMTAAGVAQAT
Ga0208577_1012731	3300026701	Soil	GYTRALIELGYRDAMEARSALLAFMSGEKLPQVMTAAGVAQAT
Ga0208603_10313482	3300027109	Forest Soil	MFEAGYTRALIELGYRDAMQARTALIAFMSGEKLPEVISAPGVAQAT
Ga0208995_10031844	3300027388	Forest Soil	ALIELGYRDAMEARSALTAFMSGEKLPQVMTAAGVAQAT
Ga0209220_10165704	3300027587	Forest Soil	LGYRDAMEARSALTAFMSGEKLPQVMTAAGVAQAT
Ga0209106_10108191	3300027616	Forest Soil	LMFEAGYTRALIELGYRDAMEARSALTAFMSGEKLPQVMTAAGVAQAT
Ga0208981_10273211	3300027669	Forest Soil	ELGYRDAMEARSALLAFMSGEKLPQVMTAAGVAQAT
Ga0209811_102925201	3300027821	Surface Soil	VCAQAGYTRALIELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT
Ga0209060_105790022	3300027826	Surface Soil	EAGYTRALIELGYRDAMEARGALLAFMEGEKLPQVMTAAGVAQAT
Ga0209579_101530572	3300027869	Surface Soil	ELIELGYRDAMDARAALLAFMEGERLPPVLTSPGVAQAT
Ga0268265_104637551	3300028380	Switchgrass Rhizosphere	LIELGYRDATEARSTLLAFMSGEKTPQAAAAPGVVAQAT
Ga0302235_103454631	3300028877	Palsa	MFEAGYTRALIELGYRDAMEARSALIAFMSGEKLPQVMTAAGVAQAT
Ga0308309_116603452	3300028906	Soil	ALIELGYRDAMQARTALLAFMSGEKLPTVMTAPGVVQAT
Ga0302302_11263331	3300029997	Palsa	RALIELGYRDAMQARIALIAFMSGERLPQVMTSPGVAQVT
Ga0311370_122445501	3300030503	Palsa	RELIELGYRDATEARATIMAFMSGEKLPPVLTSPGVAQAT
Ga0311372_104330404	3300030520	Palsa	IELGYRDAMEARAAIMAFMSGEKLPPVLTSPGVAQAT
Ga0265461_107644142	3300030743	Soil	MFEAGYTRALIELGYRDAMEARGALLAFMSGEKLPAVMTAAGVAQAT
Ga0265753_10510811	3300030862	Soil	LGYRDAMEARGALLAFMSGEKLPAVMTAAGVTQAT
Ga0170834_1036221031	3300031057	Forest Soil	EVGYTRALIELGYRDDMEARGALLAFMSGEKLPAVMTAAGVAQAT
Ga0307509_107974162	3300031507	Ectomycorrhiza	GEYTRELIELGYKDAMEARTALLAFIEGENLPNVMTSPGVAQAT
Ga0318534_100340494	3300031544	Soil	IELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0318534_102721861	3300031544	Soil	YLTFESGYTRALIELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0318534_107934982	3300031544	Soil	LIELGYRDAMEARAALLAFMSGEKLPQVLTAAGVAQAT
Ga0318572_108325751	3300031681	Soil	RALIELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0318493_108603341	3300031723	Soil	GYTRALIELGYRDALEARTALLAFMSGEKLPQVMTAAGVAQAT
Ga0318500_101641812	3300031724	Soil	LTFEAGYTRALIELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0318492_101195893	3300031748	Soil	GYTRALIELGYRDAMEARSALMAFMGGEKLPQVMTAAGVAQAT
Ga0318492_107881902	3300031748	Soil	YLTFEAGYTRALIELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0318494_105704131	3300031751	Soil	IELGYRDAMEARSALMAFMGGEKLPQVMTAAGVAQAT
Ga0307477_111295701	3300031753	Hardwood Forest Soil	FEAGYTRALIELGYRDAMEARSALLAFMSGARLPAVLTAPGVAQAT
Ga0307475_110341131	3300031754	Hardwood Forest Soil	EAGYTRALIELGYRDAMEARSALGAFMGGEKLPQVMTAAGVAQAT
Ga0318526_102731452	3300031769	Soil	GYTRALIELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0318498_105163482	3300031778	Soil	ERGYTRALIELGYRDAMEARSALMAFMGGEKLPQVMTAAGVAQAT
Ga0318498_105428622	3300031778	Soil	GYTRAHIELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0318576_100692683	3300031796	Soil	LIELGYRDAMEARSALVAFMGGEKLPQVMTAAGVAQAT
Ga0318523_100399081	3300031798	Soil	IELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT
Ga0318497_103929632	3300031805	Soil	IELGYRDAMEARSALVAFMGGEKLPQVMTAAGVAQAT
Ga0318568_106526592	3300031819	Soil	TRALIELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0307478_103567711	3300031823	Hardwood Forest Soil	YTRELIELGYHDAMEARDALLAFMHGERTPQVVESVPGVVAQAT
Ga0318517_105360522	3300031835	Soil	ELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0318511_101306242	3300031845	Soil	GYTRALIELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT
Ga0318551_100109991	3300031896	Soil	LIELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0318551_106462031	3300031896	Soil	LIELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT
Ga0318520_105422631	3300031897	Soil	GYTRALIELGYRDAMEARAALMAFMGGEKLPQVMTAAGVAQAT
Ga0306923_101064035	3300031910	Soil	FEAGYTRALIELGYRDAMEARSALVAFMGGEKLPQVMTAAGVAQAT
Ga0310912_107076081	3300031941	Soil	TFEGGYTRALIELGYRDAMEARAALMAFMGGEKLPQVMTAAGVAQAT
Ga0307479_106771202	3300031962	Hardwood Forest Soil	LIELGYKDAMEARAAIMAFMSGEKLPPMLTSPGVAQAT
Ga0318558_101377541	3300032044	Soil	TRALIELGYRDAMEARSALVAFMGGEKLPQVMTAAGVAQAT
Ga0318558_103536791	3300032044	Soil	FEAGYTRALIELGYRDAMEARTALMAFMSGEKLPQVMTAAGVAQAT
Ga0318570_102817232	3300032054	Soil	SSAGYTRELIELGYRDAMEVQPALLAFMSGERSPPVLTAPVVAQST
Ga0318513_100454461	3300032065	Soil	LTFEAGYTRALIELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT
Ga0318513_101566861	3300032065	Soil	TRALIELGYRDAMEARAALMAFMGGEKLPQVMTAAGVAQAT
Ga0318513_105531592	3300032065	Soil	LGYRDAMEARSALMAFMGGEKLPQVMTAAGVAQAT
Ga0308173_115845122	3300032074	Soil	FEGEYTRELIELGYKDAMEARTALLAFIEGETLPNVLTSPGVAQAT
Ga0318577_105979552	3300032091	Soil	YLTFEAGYTRALIELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT
Ga0335078_100042111	3300032805	Soil	FEAAYTRALIELGYRDAMEARAALAAFMSGAQLPPLMTAPGVAQAT
Ga0335078_114266462	3300032805	Soil	RELIELGYRDAMEARHALVAFVSGEQLPPVLATPGVAQAT
Ga0335075_101436481	3300032896	Soil	IELGYRDAMEARTALVAFMSGERLPSVLAASGVAQAT
Ga0335075_107776442	3300032896	Soil	LGYRDAMEARTALVAFMNGERLPPLMTAAGVAQAT
Ga0335075_112304231	3300032896	Soil	MFEAGYTRELIALGYRDAMEARTALVAFMSGERLPPVLTAPGVAQAT
Ga0335076_105680352	3300032955	Soil	TRELIELGYRDAMDARAALLAFMEGERLPPVLTSPGVAQAT
Ga0335077_121477842	3300033158	Soil	FESGYTRALIELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT
Ga0310914_105251771	3300033289	Soil	EAGYTRALIELGYRDAMEARSALMAFMSGEKLPQVMTAAGVAQAT
Ga0334854_002994_4001_4126	3300033829	Soil	YTRELIELGYRDAMDARVALMAFMRGETLPAFVTAAGVTQA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064906

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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