Metagenome / Metatranscriptome Family F063781

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063781
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	73 residues
Representative Sequence	MDVSVEIHCETCGSANYSLPGGSGDDAPIRCNDCGAPQGTIGELRAALLAQALDHSAEALRRDLDRLLAAGL
Number of Associated Samples	92
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.17 %
% of genes near scaffold ends (potentially truncated)	19.38 %
% of genes from short scaffolds (< 2000 bps)	76.74 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (29.457 % of family members)
Environment Ontology (ENVO)	Unclassified (42.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.767 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.00% β-sheet: 10.00% Coil/Unstructured: 61.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01244	Peptidase_M19	34.88
PF08494	DEAD_assoc	14.73
PF00313	CSD	1.55
PF08448	PAS_4	1.55
PF00011	HSP20	1.55
PF03315	SDH_beta	1.55
PF09140	MipZ	1.55
PF02880	PGM_PMM_III	0.78
PF12096	DUF3572	0.78
PF01641	SelR	0.78
PF08447	PAS_3	0.78
PF12867	DinB_2	0.78
PF04963	Sigma54_CBD	0.78
PF06463	Mob_synth_C	0.78
PF07030	Phage_Mu_Gp36	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	34.88
COG1201	Lhr-like helicase	Replication, recombination and repair [L]	14.73
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.55
COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	Cell cycle control, cell division, chromosome partitioning [D]	1.55
COG1760	L-serine deaminase	Amino acid transport and metabolism [E]	1.55
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.78
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.78
COG1508	DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog	Transcription [K]	0.78
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	0.78
COG4387	Mu-like prophage protein gp36	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.25 %
Unclassified	root	N/A	7.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.25 %
Unclassified	root	N/A	7.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.25 %
Unclassified	root	N/A	7.75 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	87.60 %
Unclassified	root	N/A	7.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	75.97 %
Unclassified	root	N/A	7.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.33 %

Name	Rank	Taxonomy	Distribution
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	26.36 %
Unclassified	root	N/A	7.75 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.55 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	26.36 %
Unclassified	root	N/A	7.75 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	21.71 %
Unclassified	root	N/A	7.75 %
Allosphingosinicella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Allosphingosinicella	1.55 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.75 %
Allosphingosinicella indica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Allosphingosinicella → Allosphingosinicella indica	1.55 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.55 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.75 %
Allosphingosinicella indica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Allosphingosinicella → Allosphingosinicella indica	1.55 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.55 %
Sphingomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10377348	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300001989\|JGI24739J22299_10041475	Not Available	1531	Open in IMG/M
3300004153\|Ga0063455_100987411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	608	Open in IMG/M
3300005093\|Ga0062594_102488653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300005328\|Ga0070676_10140459	All Organisms → cellular organisms → Bacteria → Proteobacteria	1537	Open in IMG/M
3300005329\|Ga0070683_102121853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	540	Open in IMG/M
3300005339\|Ga0070660_100005381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	8859	Open in IMG/M
3300005339\|Ga0070660_101559846	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300005343\|Ga0070687_100708412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	704	Open in IMG/M
3300005354\|Ga0070675_101924306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300005356\|Ga0070674_102179529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300005364\|Ga0070673_100476678	All Organisms → cellular organisms → Bacteria → Proteobacteria	1126	Open in IMG/M
3300005364\|Ga0070673_101497517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300005367\|Ga0070667_101789122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300005441\|Ga0070700_100446440	All Organisms → cellular organisms → Bacteria → Proteobacteria	983	Open in IMG/M
3300005535\|Ga0070684_100404358	All Organisms → cellular organisms → Bacteria → Proteobacteria	1259	Open in IMG/M
3300005535\|Ga0070684_101111660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300005535\|Ga0070684_101933471	All Organisms → cellular organisms → Bacteria → Proteobacteria	557	Open in IMG/M
3300005535\|Ga0070684_102006835	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005546\|Ga0070696_100334513	All Organisms → cellular organisms → Bacteria → Proteobacteria	1169	Open in IMG/M
3300005548\|Ga0070665_100000148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	128573	Open in IMG/M
3300005549\|Ga0070704_102232461	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300005564\|Ga0070664_102244268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	518	Open in IMG/M
3300005578\|Ga0068854_100836666	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300005578\|Ga0068854_101205828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300005840\|Ga0068870_11192148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300005841\|Ga0068863_100010506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	8994	Open in IMG/M
3300006031\|Ga0066651_10001304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	8499	Open in IMG/M
3300006046\|Ga0066652_100000005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	613916	Open in IMG/M
3300006237\|Ga0097621_101730476	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300006794\|Ga0066658_10225178	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300006871\|Ga0075434_100276235	All Organisms → cellular organisms → Bacteria → Proteobacteria	1699	Open in IMG/M
3300006914\|Ga0075436_101225530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300009098\|Ga0105245_10030987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	4731	Open in IMG/M
3300009098\|Ga0105245_10478574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1258	Open in IMG/M
3300009148\|Ga0105243_10373826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1316	Open in IMG/M
3300009148\|Ga0105243_10502091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1149	Open in IMG/M
3300009551\|Ga0105238_11590903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300010396\|Ga0134126_10943795	Not Available	968	Open in IMG/M
3300010399\|Ga0134127_13397590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300010400\|Ga0134122_11487950	Not Available	695	Open in IMG/M
3300010401\|Ga0134121_10552490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1069	Open in IMG/M
3300011196\|Ga0137482_100751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	4855	Open in IMG/M
3300011241\|Ga0137476_100006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	5240	Open in IMG/M
3300011244\|Ga0137483_102099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2345	Open in IMG/M
3300012668\|Ga0157216_10208111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	924	Open in IMG/M
3300012958\|Ga0164299_10871404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300012977\|Ga0134087_10099231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1218	Open in IMG/M
3300013296\|Ga0157374_11461552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300013308\|Ga0157375_11963790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300014325\|Ga0163163_11342112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300014325\|Ga0163163_11419956	Not Available	756	Open in IMG/M
3300014325\|Ga0163163_11891408	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300015064\|Ga0167641_108786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1211	Open in IMG/M
3300015064\|Ga0167641_123109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300015069\|Ga0167633_100077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	49344	Open in IMG/M
3300015085\|Ga0167632_1038714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300015085\|Ga0167632_1048574	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300015371\|Ga0132258_10875194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	2268	Open in IMG/M
3300015371\|Ga0132258_11030505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2080	Open in IMG/M
3300015371\|Ga0132258_12914906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	1188	Open in IMG/M
3300015373\|Ga0132257_102058544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	737	Open in IMG/M
3300015374\|Ga0132255_101743692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300017965\|Ga0190266_10000177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Allosphingosinicella → Allosphingosinicella indica	9871	Open in IMG/M
3300018422\|Ga0190265_10000320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	37884	Open in IMG/M
3300018422\|Ga0190265_10000548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	26553	Open in IMG/M
3300018422\|Ga0190265_10002272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	12868	Open in IMG/M
3300018422\|Ga0190265_10046073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3763	Open in IMG/M
3300018422\|Ga0190265_10889929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1013	Open in IMG/M
3300018422\|Ga0190265_10965262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	974	Open in IMG/M
3300018422\|Ga0190265_11579886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300018422\|Ga0190265_11774561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300018422\|Ga0190265_13727024	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300018429\|Ga0190272_10113843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1774	Open in IMG/M
3300018429\|Ga0190272_10247662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1334	Open in IMG/M
3300018429\|Ga0190272_11210780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300018429\|Ga0190272_11357224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300018429\|Ga0190272_11594596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300018429\|Ga0190272_12952180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300018432\|Ga0190275_10000026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	208924	Open in IMG/M
3300018432\|Ga0190275_10000036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	173744	Open in IMG/M
3300018432\|Ga0190275_10000116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	93989	Open in IMG/M
3300018469\|Ga0190270_11112739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	824	Open in IMG/M
3300018476\|Ga0190274_10003497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	9347	Open in IMG/M
3300018476\|Ga0190274_10158554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1924	Open in IMG/M
3300018476\|Ga0190274_10384244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1353	Open in IMG/M
3300018920\|Ga0190273_11988264	Not Available	538	Open in IMG/M
3300019377\|Ga0190264_10282055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300019377\|Ga0190264_10439873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	864	Open in IMG/M
3300019377\|Ga0190264_10490252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	836	Open in IMG/M
3300019377\|Ga0190264_10498441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300019377\|Ga0190264_10896928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	692	Open in IMG/M
3300019487\|Ga0187893_10190750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1591	Open in IMG/M
3300020012\|Ga0193732_1035005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	866	Open in IMG/M
3300020027\|Ga0193752_1127982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1015	Open in IMG/M
3300020027\|Ga0193752_1332728	Not Available	516	Open in IMG/M
3300020034\|Ga0193753_10119472	Not Available	1291	Open in IMG/M
3300020059\|Ga0193745_1000001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	883719	Open in IMG/M
3300020061\|Ga0193716_1214983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300020070\|Ga0206356_10646837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	2950	Open in IMG/M
3300021384\|Ga0213876_10042743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	2394	Open in IMG/M
3300022756\|Ga0222622_11316154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300025893\|Ga0207682_10001525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	10675	Open in IMG/M
3300025907\|Ga0207645_10043411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2877	Open in IMG/M
3300025918\|Ga0207662_10319657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1036	Open in IMG/M
3300025919\|Ga0207657_10011117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Allosphingosinicella → Allosphingosinicella indica	8948	Open in IMG/M
3300025919\|Ga0207657_10223675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1507	Open in IMG/M
3300025921\|Ga0207652_11472408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300025924\|Ga0207694_11376497	Not Available	596	Open in IMG/M
3300025926\|Ga0207659_10961250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300025927\|Ga0207687_10436462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1084	Open in IMG/M
3300025935\|Ga0207709_11084961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300025940\|Ga0207691_11340066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300025944\|Ga0207661_10569307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300025960\|Ga0207651_10448926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1106	Open in IMG/M
3300026041\|Ga0207639_12189049	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300026075\|Ga0207708_10193248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1621	Open in IMG/M
3300026088\|Ga0207641_10200503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1839	Open in IMG/M
3300026116\|Ga0207674_11344267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	684	Open in IMG/M
3300026306\|Ga0209468_1001173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	11719	Open in IMG/M
3300027809\|Ga0209574_10042476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1131	Open in IMG/M
3300028379\|Ga0268266_10000754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	43290	Open in IMG/M
3300028790\|Ga0307283_10015017	Not Available	1551	Open in IMG/M
3300031164\|Ga0307502_10114923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300031456\|Ga0307513_10143196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	2313	Open in IMG/M
3300031740\|Ga0307468_100548190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	930	Open in IMG/M
3300031944\|Ga0310884_10553460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300031996\|Ga0308176_11332968	Not Available	763	Open in IMG/M
3300034194\|Ga0370499_0178680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.24%
Host-Associated	Host-Associated	38.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.47%
Plants	Host-Associated → Plants	38.76%
Aquatic	Environmental → Aquatic	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.08%
Roots	Host-Associated → Plants → Roots	4.65%
Sediment	Environmental → Aquatic → Sediment	0.78%
Cave	Environmental → Terrestrial → Cave	0.78%
Phylloplane	Host-Associated → Plants → Phylloplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.29%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.95%
Loam	Environmental → Terrestrial → Soil → Loam	11.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.30%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.20%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.10%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	29.46%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	6.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.10%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.78%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.78%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.78%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011196	Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 17 - S13.2.60.2.a - transect 2, repeat 2, age 113 years, surface depth)	Environmental	Open in IMG/M
3300011241	Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 11 - S13.2.50.a - transect 2, age 50 years, surface depth).	Environmental	Open in IMG/M
3300011244	Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 18 - S13.2.60.3.a - transect 2, repeat 3, age 113 years, surface depth)	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015064	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7B, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015069	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4C, Ice margin, adjacent to proglacial lake	Environmental	Open in IMG/M
3300015085	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300034194	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_103773482	3300001686	Soil	MDVSVEIHCESCGSANYSLAAGTSDDASIRCNDCGAEQGTIGALKAALLDHVLDHSAEALRSDLDRLLAAKL*
JGI24739J22299_100414752	3300001989	Corn Rhizosphere	MDVSVEIHCETCGSANYSLPEGEGDSASIRCNDCGAAQGTVGELREALLQQVFDHSAEALRRDLDRLLAARF*
Ga0063455_1009874112	3300004153	Soil	MDVSVEIHCETCGSANYSLPDGHADEAPIRCNDCGAPQGTIGELRANLLEQVLDHSAEALRRDLDRLLAARL*
Ga0062594_1024886532	3300005093	Soil	MDVSVEIHCESCGSANYSLPEGSGDEAPIRCNDCGAHQGTIGELRAALREQVLGHSAEALRRELERLL
Ga0070676_101404592	3300005328	Miscanthus Rhizosphere	MDVSVEIHCKSCGSANYSLPEGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL*
Ga0070683_1021218532	3300005329	Corn Rhizosphere	MDVSVEIHCETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL*
Ga0070660_1000053811	3300005339	Corn Rhizosphere	MDVSVEIHCESCGSANYSLPEGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL*
Ga0070660_1015598461	3300005339	Corn Rhizosphere	MDVSVEIHCEACGSANYSLPDGQADEAPIRCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAAKL*
Ga0070687_1007084122	3300005343	Switchgrass Rhizosphere	MDVSVEIHCELCGSANYSLPAGHEEDAPIRCNDCGAPQGTVGELREALAQQVFDHSAEALRRDLDRLLAARL*
Ga0070675_1019243061	3300005354	Miscanthus Rhizosphere	MDISLEIHCESCGSANYSLPRGSGDEAPILCLDCGADQGSVGALKAELVAQALGRSAESLRLDVERLRGGAPHAG*
Ga0070674_1021795291	3300005356	Miscanthus Rhizosphere	GYDPFKPGKGDRHMDISLEIHCETCGSANYSLPGGSGEDAPILCLDCGADQGSVGALKAELVARALGQSAESQRLDLERLRGDAPRPGRIDL*
Ga0070673_1004766782	3300005364	Switchgrass Rhizosphere	MDVSVEIHCESCGSANYSLPQGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL*
Ga0070673_1014975172	3300005364	Switchgrass Rhizosphere	MDISLEIHCESCGSANYSLPRGSGDEAPILCLDCGADQGSVGALKAELVAQALGRSAESLRLDVERLRGGAP
Ga0070667_1017891222	3300005367	Switchgrass Rhizosphere	ETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL*
Ga0070700_1004464401	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MDVSVEIHCESCGSANYSLPEGSGDEAPIRCNDCGAPQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL*
Ga0070684_1004043582	3300005535	Corn Rhizosphere	MDITVEIHCESCGSANYSLPGGAEDGAPISCNDCGAPQGTIGELRAALLEQVIDHSAEALRRDLDRLLAAKL*
Ga0070684_1011116601	3300005535	Corn Rhizosphere	MDVSVEIHCETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELREVLLQQALDHSAEALRRDLDRLLAARL*
Ga0070684_1019334711	3300005535	Corn Rhizosphere	MDVSVEIHCEACGSANYSLPDGQADEAAIRCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAAKL*
Ga0070684_1020068351	3300005535	Corn Rhizosphere	MDVSVEIHCETCGSANYSLPGGMEDEAQIHCNDCGAAQGTIGALRATLLEQVVDHSAEALRRDLDRLLAAKP*
Ga0070696_1003345131	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SSDAMDVSVEIHCESCGSANYSLPEGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL*
Ga0070665_100000148105	3300005548	Switchgrass Rhizosphere	MDVTVEIHCETCGSANYSLPEGNGDSGPIRCNDCGAPQGTIGELRAALLEQVFDHSAEALRRDLDRLLEAKL*
Ga0070704_1022324611	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDVSVEIHCETCGSANYSLPGGMEDAAPIRCNDCGAPQGTIGELRATLLELVLDHSAEALRRDLDRLLAAKL*
Ga0070664_1022442682	3300005564	Corn Rhizosphere	MDVSVEIHCEACGSANYSLRDGHDDHAPISCNDCGARQGTIGELRAALLQQVFDHSAEALRRDLDRLLAAKL*
Ga0068854_1008366662	3300005578	Corn Rhizosphere	MDVSVEIHCEACGSANYSLPDGQADEAPIRCNDCGAAQGTIGELRATLLEQVFDHSAEALRRDLDRLLAAKL*
Ga0068854_1012058282	3300005578	Corn Rhizosphere	MDVSVEIHCEACGSANYSLPGGNDDAAPIRCNDCGAPQGTIGELRAALLQQALDHSAEALRRDLDRLLAAKL*
Ga0068870_111921482	3300005840	Miscanthus Rhizosphere	SANYSLPDGQEDQAQIRCNDCDAPQGTIGELRAILLEQVVDHSAEALRRDLDRLLEVKL*
Ga0068863_1000105062	3300005841	Switchgrass Rhizosphere	MDVSVEIHCETCGSANYSLPDGREDAAAIRCNDCGAPQGTIGELRATLLEQVFDHSAEALRRDLDRLLAAKL*
Ga0066651_100013046	3300006031	Soil	MDVSVEIHCEACGSANYSLPPAGEPSDADPIRCNDCGAPQGTIGELKSALLQQVLDHSAEALRRDLDRLLAKP*
Ga0066652_100000005368	3300006046	Soil	LGFGSREMDVSVEIHCEACGSANYSLPPAGEPSDADPIRCNDCGAPQGTIGELKSALLQQVLDHSAEALRRDLDRLLAKP*
Ga0097621_1017304762	3300006237	Miscanthus Rhizosphere	MDVSVEVHCEACGSANYSLPDGGGDTAPIRCNDCGADQGTLGELRSLLDDFVVQHSAEALRRDLDRLLAAKL*
Ga0066658_102251782	3300006794	Soil	MDVSVEIHCETCGSANYSLPDGEGDEAPIRCNDCGAPQGTIGELRAALLQQVFDHSAEALRRDLDRLLAARL*
Ga0075434_1002762352	3300006871	Populus Rhizosphere	MDVSVEIHCETCGSANYSLPAGQEDDAPISCNDCGASQGTIGELRATLLQQVFDHSAEALRRDLDRLLAARL*
Ga0075436_1012255302	3300006914	Populus Rhizosphere	MDVSVEIHCEACGSANYSLPAGQEDDAPISCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAAKL*
Ga0105245_100309874	3300009098	Miscanthus Rhizosphere	MDVSVEIHCEACGSANYSLPEDDRDEAPIRCNDCGAHQGTIGELRAALLQQVIDHSAEALRRDLDRVLAARL*
Ga0105245_104785742	3300009098	Miscanthus Rhizosphere	MDVIVEIHCETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL*
Ga0105243_103738262	3300009148	Miscanthus Rhizosphere	MDVSVEIHCEACGSANYSLPGGNDDAAPIRCNDCGAPQGTIGELRAVLLQQALDHSAEALRRDLDRLLAARL*
Ga0105243_105020912	3300009148	Miscanthus Rhizosphere	MDVSVEIHCEQCGSANYSLPGGHEDDAAIRCNDCGAHQGTIGELRAALREQVLGHSAEALRRELERLLAARL*
Ga0105238_115909032	3300009551	Corn Rhizosphere	MDVSVEIHCETCGSASYSLPGGHEDGGPIGCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL*
Ga0134126_109437952	3300010396	Terrestrial Soil	MLYGKAMDVSVEIHCETCGSANYSLPEGEGDSASIRCNDCGAAQGTVGELREALLQQVFDHSAEA
Ga0134127_133975901	3300010399	Terrestrial Soil	KPAKGRRLMDISLEIHCESCGSANYSLPRGSGDEAPILCLDCGADQGSVGALKAELAARALGRSAESLRLDVERLRGGAPHAG*
Ga0134122_114879501	3300010400	Terrestrial Soil	MDVSVEIHCELCGSANYSLPGGHEDDAPIRCNDCGALQGTIGELRAALREQVLGHSAEALRRELERLLAAKL*
Ga0134121_105524902	3300010401	Terrestrial Soil	MTMDVSVELHCEACGSANYGLPEGSGDAAPIRCNDCGASLGTVAELKAALFAEALAQSAESLRLGLARLGGGD*
Ga0137482_1007513	3300011196	Glacier Forefield Soil	MDVSVEIHCESCGSANYSLPEGAGEDAPILCNDCGADQGSVAELRAALAARALEQSAESLRRDLERLRGNDP*
Ga0137476_1000065	3300011241	Glacier Forefield Soil	MDVSVEIHCETCGSANYSLPEGNGDGGPIRCNDCGAPQGTIGELRAALLEQVLDHSAEALRRDLDRLLEAKL*
Ga0137483_1020993	3300011244	Glacier Forefield Soil	MDVSVEIHCETCGSANYSLPDGSADDAPIRCNDCGAPQGTIGELRAILLQQAIDHSAEALRRDLDRLLEAKL*
Ga0157216_102081111	3300012668	Glacier Forefield Soil	GMDVSVEIHCEACGSANYSLPEGAAQDAPIRCNDCGADQGTVAALTAALIALTVERSAESLRRELDRLRRPGPGEVMH*
Ga0164299_108714041	3300012958	Soil	HCETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL*
Ga0134087_100992312	3300012977	Grasslands Soil	MDVSVEIHCETCGSANYSLPAGHEDAAPIRCNDCGAPQGTVGELRAALLQQVFDHSAEALRRDLDRLLAARL*
Ga0157374_114615522	3300013296	Miscanthus Rhizosphere	MDVSVEIHCETCGSANYSLPGGHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL*
Ga0157375_119637902	3300013308	Miscanthus Rhizosphere	MDVSVEIHCEACGSANYSLPGGSGDGAPIRCNDCGAPQGTIGELRVALLEQVLDHSAEALRRDLDRLLAAGL*
Ga0163163_113421121	3300014325	Switchgrass Rhizosphere	MDITVEIHCESCGSANYSLPGGAEDGAPISCNDCGAPQGTIGELRAALLEQVIDHSAEALRRDLDRLL
Ga0163163_114199561	3300014325	Switchgrass Rhizosphere	MMDVSVEIHCETCGSANYSLPDGQEDAAAIRCNDCGAPQGTIGELRATLLEQVFDHSAEALRRDLDRLLAAKL*
Ga0163163_118914081	3300014325	Switchgrass Rhizosphere	MDVSVEIHCENCGSANYSLRDGREDQAQIRCNDCDAPQGTIGELRAILLEQVVDHSAEALRRDLDRLLAAKL*
Ga0167641_1087862	3300015064	Glacier Forefield Soil	MDVSVEIHCETCGSANYSLPGGSGDDAPIRCNDCGAPQGTIGELRAALMEQVLDHSAEALRPAARGQAIAWP*
Ga0167641_1231092	3300015064	Glacier Forefield Soil	MDVSVEIHCEACGSANYSLPEGDGAEAPIRCNDCSAHQGTIGELRASLLQQVIDHSAEALRRDLDRLLAAKL*
Ga0167633_10007725	3300015069	Glacier Forefield Soil	MDVSVEIHCEACGSANYSLPNGAAEESAILCNDCGADQGSVAALKAALIAQALDHSAESLRRDLDRLRAPEA*
Ga0167632_10387142	3300015085	Glacier Forefield Soil	MDVSVEIHCETCGSANYSLPGGSGDDAPIRCNDCGAPQGTIGELRAALLAQALDHSAEALRRDLDRLLAAGL*
Ga0167632_10485741	3300015085	Glacier Forefield Soil	VSVEIHCEACGSANFSLPEGVGDAAPLRCNDCGASLGSVAELKAALIAEALAQSAESLRLGLARLGGAD*
Ga0132258_108751941	3300015371	Arabidopsis Rhizosphere	MDVSVEIHCEVCGSANYSLPETSEPADSDPIRCNDCGALQGTIGELKSALLQQVLDHSAEALRRDLDRLLARP*
Ga0132258_110305052	3300015371	Arabidopsis Rhizosphere	MDVSVEIHCELCGSANYSLPEGDEEGAAIRCNDCGAHQGTVGELKSLLLEAVRDHCAEALRRDLDRLLTKP*
Ga0132258_129149063	3300015371	Arabidopsis Rhizosphere	MAGLMDVSVEIHCEACGSANYSLPQAGEPADSDPIRCNDCGALQGTIGELRAALLQQVLDHSAEALRRDLDRLLTRP*
Ga0132257_1020585441	3300015373	Arabidopsis Rhizosphere	MDVSVEIHCEVCGSANYSLPETSEPADSDPIRCNDCGALQGTIGELKSALLQQVLDHSAEALRRDLDRLLAWP*
Ga0132255_1017436921	3300015374	Arabidopsis Rhizosphere	MDVSVEIHCEACGSANYSLPQGEGAESPIRCNDCGAHQGTVGELRSMLMDAVRDHSAEALRRDLDRLLTKP*
Ga0190266_100001779	3300017965	Soil	MDVSVEIHCEVCGSANYSLPRGSESSDADPIGCNDCGARQGTIGELKAALLQQVLDHSAEALRRDLDRLLTKP
Ga0190265_100003208	3300018422	Soil	MDVSVEIHCDACGSANYSLPDGSAGGTEIRCNDCGADQGTVDALRAALIGQALAQSAEALRRDLGRLGTVEPSE
Ga0190265_100005484	3300018422	Soil	MDVSVEIHCEACGSANYSLEGFAGDVAEEAPIRCNDCGADQGTLGALKAALIAQAIAQSAEALRRDLDRLDNGV
Ga0190265_100022729	3300018422	Soil	MDVSVEIHCEACGSANYSLPEGAAEQAPIRCNDCGADQGSVAELKAGLIAQALAQSAESLRRDLDKLNPEEPT
Ga0190265_100460733	3300018422	Soil	MDVSVEIHCETCGSANYSLPGGVGDDALILCNDCGADQGNVAALKATMIAQALDHSAESLRRGLDKLTGLDLKT
Ga0190265_108899292	3300018422	Soil	MDVSVDIHCDACGSANYSLPQGTGEEAPVRCNDCGTEQGSVADLKAMLVAKALDQSAESLRRRLDKLRGPDLKS
Ga0190265_109652622	3300018422	Soil	MDVSVEIHCESCGSANYSLPAGAGEDAPILCNDCGAGQGSVAELKAALAAHALEQSAESLRRDLERLRDAGSGT
Ga0190265_115798861	3300018422	Soil	MDVSVEIHCESCGSANYSLPDGSADDAPIRCNDCGAPQGTIGELRAALLDQAIDHSAEALRRDLDRLLAAKL
Ga0190265_117745612	3300018422	Soil	MDVSVEIYCEACGSAHYSLPEGKGEDAPIRCNDCGADQGSVADLKAVLVAKALDQSAESLRRDLDKLSGLDLKT
Ga0190265_137270242	3300018422	Soil	EIHCEACGSANYSLPEGTAQDAPIRCNDCGADQGTVAELTAALVALAVERSAQSLRRELDRLQGPGPGDVTH
Ga0190272_101138432	3300018429	Soil	MDVSVEIHCDACGSANYSLPEGLGDGSPIRCNDCGADQGSVEELRAALLAQAIGHSAEALRQGLERIVSKEEN
Ga0190272_102476622	3300018429	Soil	MDVSVEIHCEACGSANYSLPDGTAEDASILCNDCGAQQGSVAELEAALIAEALAQSAQSLLRGLDKLREAS
Ga0190272_112107802	3300018429	Soil	MDVSVEIHCENCGSANYGLPDGSADEAPIRCNDCGAPQGTIGDLRAVLLEQVLDHSAEALRRDLDRVLAAKL
Ga0190272_113572242	3300018429	Soil	MDVSVEINCEACGSANYSLPDGAGEDAPIRCNDCGADQGTVAELTAAMVALAVERSAESLRRELHRIGGPGPGDVKH
Ga0190272_115945961	3300018429	Soil	MDVEVEIHCETCGSANYSLPDGGADDAEIRCMDCGARLGNIAELKAEMLEQAVLHSAEALRRDLDRLLAAAAPKSDAA
Ga0190272_129521802	3300018429	Soil	MDVSVEIHCESCGSANYSLPEGAGEDAPILCNDCGADQGSVAELRAALAARALEQSAESLRREVERLREIDP
Ga0190275_1000002683	3300018432	Soil	MDISVEIHCEACGSANYSLPEGAAQDAPIRCNDCGADQGTVAALTAALIALTVERSAESLRSELDRLRGPGPGEVIH
Ga0190275_1000003640	3300018432	Soil	MDVSVEIHCESCGSANYSLPDGSADEAPIRCNDCGAPQGTIGELRAALLEQMLDHSAEALRRDLDRLLAAKL
Ga0190275_1000011626	3300018432	Soil	MDVSVEIHCDACGSANYSLPEGLGDGSAIRCNDCGADQGSVEELRAALLAQAIGHSAEALRQGLERIVSKEEN
Ga0190270_111127391	3300018469	Soil	MDVSVEIHCEACGSANYSLPEGSAQDAPIRCNDCGADQGTVAALTAALIAVTVERSAESLRRELDRLRRPEPGEVVH
Ga0190274_100034972	3300018476	Soil	MAGRDCPDPGKAMMDVSVEIHCDTCGSANYSLPDGIFDEAPIRCNDCGNVLGNVAELKAALIAGALDHSAEALRRDLGKLSNIEPS
Ga0190274_101585542	3300018476	Soil	MDVSVEIHCENCGSANYSLPAGQEDKAPIRCNDCDAPQGSIGELKATLLEQVFDHSAEALRRDVDRLLAAKL
Ga0190274_103842442	3300018476	Soil	MDISLEIHCETCGSANYSLPGGSGEDAPILCLDCGADQGSVGALKADLVARALGQSAESLRLDLERLQGDAPRPGRIDL
Ga0190273_119882642	3300018920	Soil	MDVSVEIHCETCGSANYSLPDGTGDDAAIRCNDCGAPQGTIGELRAALLAQALDHSAEALRRD
Ga0190264_102820552	3300019377	Soil	MDVSVEIHCEACGSANYSLPEGAAEDAPIRCNDCGADQGSVAELRAALVAEALAQSAESLRRGLDKLHEAS
Ga0190264_104398732	3300019377	Soil	GSETKGRREMDASVEIHCEACGSANFRLPEGSGDDAPIRCNDCGADQGSVTELKAILIAQALRQSAEALRRDLDKLDGLDLKT
Ga0190264_104902522	3300019377	Soil	MDVSVEIYCEACGSAHYSLPEGKDEDAPIRCNDCGADQGSVADLKAVLVAKALDQSAESLRRDLDKLSGLDLKT
Ga0190264_104984412	3300019377	Soil	EIHCEACGSANYSLPEGVAQDAPIRCNDCGADQGTVAALTAALIALTEERSAESLRRELDRLRRPGPGEVIH
Ga0190264_108969282	3300019377	Soil	MDVSVEIHCEACGSANYSLPEGAAQDAPIRCNDCGADQGTVAALTAALIALTVERSAESLRRELDRLRRPGPGEVIH
Ga0187893_101907502	3300019487	Microbial Mat On Rocks	MDVSVEMHCETCGSANYSLAGDGEAARLRCNDCGADQGSAGELEAALRQAALAQSAEALRRGLGRLRGSEEK
Ga0193732_10350052	3300020012	Soil	KKHDMDVSVEIHCETCGSANYSLPGGNGDDAPIRCNDCGAPQGTIGELRAELLGQVLDHSAEALRRDLDRLLAAKL
Ga0193752_11279822	3300020027	Soil	MDVTVEIHCEACGSANYSLPDGEADAAAISCNDCGAAQGTIGELRALLFQQVIDHSAEALRRDLDRLLAAGL
Ga0193752_13327281	3300020027	Soil	MDVSVEIHCETCGSANYSLPDGMEDEAAIRCNDCGAPQGSIGALRATLLEQVFDHSAEALRRDLDRLLAAKL
Ga0193753_101194722	3300020034	Soil	HCEACGSANYSLPVEAAEDGPITCNDCGADQGSVAALKAALVAQVRAQSAETLRRDADRLRKAGE
Ga0193745_1000001968	3300020059	Soil	MDVSVEIHCETCGSANYSLPGGSGDDAPIRCNDCGAPQGTIGELRAALMEQVLDHSAEALRRDLDRLLAARL
Ga0193716_12149831	3300020061	Soil	MDVSVEIHCESCGSANYSLPEGVAEDAPILCNDCGADQGSVADLKAVLIAQAVDHSAESLRRGLDKLTGLDLKT
Ga0206356_106468373	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MDVSVEIHCEACGSANYSLPDGQADEAPIRCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAAKL
Ga0213876_100427432	3300021384	Plant Roots	VKAMDVSVEIHCETCGSANYSLPDGHGDESPIRCNDCGAPQGTIGELKAALVEQVFDHSAEALRRDLERLLAARL
Ga0222622_113161541	3300022756	Groundwater Sediment	MDIILEIHCEICGSANYSLPGGSEDEGPISCNDCGAPQGTIGALKAALLEQFFDHSAEALRRDLDRLLAAKL
Ga0207682_100015253	3300025893	Miscanthus Rhizosphere	MDVSVEIHCESCGSANYSLPEGIADAAPIRCNDCGARSGSFAELKAALIAGALGHSAEALRRDLGKLSNIEPS
Ga0207645_100434113	3300025907	Miscanthus Rhizosphere	MDVSVEIHCKSCGSANYSLPEGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL
Ga0207662_103196572	3300025918	Switchgrass Rhizosphere	MDVSVEIHCELCGSANYSLPAGHEEDAPIRCNDCGAPQGTVGELREALAQQVFDHSAEALRRDLDRLLAARL
Ga0207657_100111179	3300025919	Corn Rhizosphere	MDVSVEIHCESCGSANYSLPEGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL
Ga0207657_102236752	3300025919	Corn Rhizosphere	MDVIVEIHCETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL
Ga0207652_114724081	3300025921	Corn Rhizosphere	MDVSVEIHCETCGSANYSLPGSHEDDGPIVCNDCGAPQGTIGELRAELREQVFGHSAEALRRDLDRLLAAKL
Ga0207694_113764971	3300025924	Corn Rhizosphere	MDASVEIHCEACGSANYSLPDGQADEAAIRCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAAK
Ga0207659_109612502	3300025926	Miscanthus Rhizosphere	MDISLEIHCESCGSANYSLPRGSGDEAPILCLDCGADQGSVGALKAELVAQALGRSAESLRLDVERLRGGAPHAG
Ga0207687_104364622	3300025927	Miscanthus Rhizosphere	HCEACGSANYSLPEDDRDEAPIRCNDCGAHQGTIGELRAALLQQVIDHSAEALRRDLDRVLAARL
Ga0207709_110849611	3300025935	Miscanthus Rhizosphere	MDVSVEIHCEACGSANYSLPGGNDDAAPIRCNDCGAPQGTIGELRAVLLQQALDHSAEALRRDLDRLLAARL
Ga0207691_113400662	3300025940	Miscanthus Rhizosphere	MDVSVEIHCETCGSANYSLPGGHEDDGPIVCNDCGAPQGTIGGLRAELREQVFGHSAEALRRDLD
Ga0207661_105693072	3300025944	Corn Rhizosphere	MDVSVEIHCEACGSANYSLPDGQADEAPIRCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAGRL
Ga0207651_104489262	3300025960	Switchgrass Rhizosphere	MDVSVEIHCESCGSANYSLPQGSGDEAPIRCNDCGAHQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL
Ga0207639_121890491	3300026041	Corn Rhizosphere	DVSVEIHCEACGSANYSLPDGQADEAPIRCNDCGAAQGTIGELRATLLQQVFDHSAEALRRDLDRLLAAKL
Ga0207708_101932482	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MDVSVEIHCESCGSANYSLPEGSGDEAPIRCNDCGAPQGTIGELRAALLRQAIDHSAEALRRDLDRLLAAKL
Ga0207641_102005032	3300026088	Switchgrass Rhizosphere	MDVSVEIHCETCGSANYSLPDGREDAAAIRCNDCGAPQGTIGELRATLLEQVFDHSAEALRRDLDRLLAAKL
Ga0207674_113442671	3300026116	Corn Rhizosphere	SANYSLPGGAEDGAPISCNDCGAPQGTIGELRAALLEQVIDHSAEALRRDLDRLLAAKL
Ga0209468_10011737	3300026306	Soil	LGFGSREMDVSVEIHCEACGSANYSLPPAGEPSDADPIRCNDCGAPQGTIGELKSALLQQVLDHSAEALRRDLDRLLAKP
Ga0209574_100424762	3300027809	Agave	MDVSVEVHCEACGSANYSLAGDGEVARIHCNDCGADQGSVGDLKAALQQAALARSAEALRRDLGRLGNVKEER
Ga0268266_100007544	3300028379	Switchgrass Rhizosphere	MDVTVEIHCETCGSANYSLPEGNGDSGPIRCNDCGAPQGTIGELRAALLEQVFDHSAEALRRDLDRLLEAKL
Ga0307283_100150171	3300028790	Soil	MDVSVEIHCENCGSANYSLPDGQEDQAQIRCNDCDAPQGTIAELRAILLEQVVDHSAEALRRDLDRLLAAKL
Ga0307502_101149232	3300031164	Soil	MDVSVEIHCEACGSANYSLPGGVGEEAPIRCNDCGADQGLVGELKAALLARVLAQSAEALRGGLDKLGELDLKS
Ga0307513_101431962	3300031456	Ectomycorrhiza	LDISLEIHCETCGSANYSLPQGSGDDAPILCRDCGTEHGSVGALKAEMMAHALGQSAESLRLELERLRGQAPQAG
Ga0307468_1005481901	3300031740	Hardwood Forest Soil	MDISLEIHCETCGSANYSLPGGSGEDAPILCLDCGADQGSVGALKAELVARALGQSAESQRLDLERLRGDAPRPGRIDL
Ga0310884_105534601	3300031944	Soil	MDVSVEIHCEVCGSANYSLPQAGEFSDADPIRCNDCGAPQGTIGELKAALLQQVLDHSAEALRRDLDRLLTKP
Ga0308176_113329681	3300031996	Soil	MDVSVEIHCEACGSANYSLPEGHGDEAAISCNDYGAAQGTIGELKAALHQQVLDHSAEALRRDLDRLLAAKL
Ga0370499_0178680_249_476	3300034194	Untreated Peat Soil	MDVSVEIHCDTCGSGNYSLPEGIGAEARRIHCNDCGADQGSVDELNATLQQAARANSAEALRRDLGRLGDGEEGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063781

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences