Metagenome / Metatranscriptome Family F061958

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061958
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	81 residues
Representative Sequence	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKI
Number of Associated Samples	113
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.24 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	75.57 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.443 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.741 % of family members)
Environment Ontology (ENVO)	Unclassified (32.061 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.328 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.13% β-sheet: 0.00% Coil/Unstructured: 44.87%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF13561	adh_short_C2	24.43
PF00106	adh_short	2.29
PF00255	GSHPx	0.76
PF08659	KR	0.76
PF02617	ClpS	0.76
PF07238	PilZ	0.76
PF03741	TerC	0.76
PF01553	Acyltransferase	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	0.76
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.76
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.44 %
Unclassified	root	N/A	17.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.44 %
Unclassified	root	N/A	17.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.44 %
Unclassified	root	N/A	17.56 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	81.68 %
Unclassified	root	N/A	17.56 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	76.34 %
Unclassified	root	N/A	17.56 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	69.47 %
Unclassified	root	N/A	17.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	18.32 %
Unclassified	root	N/A	17.56 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.29 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.53 %
Geminicoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae	0.76 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	18.32 %
Unclassified	root	N/A	17.56 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	2.29 %
Geminicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	18.32 %
Unclassified	root	N/A	17.56 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.29 %
Geminicoccus flavidas	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus flavidas	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.56 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	10.69 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	7.63 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.29 %
Geminicoccus flavidas	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus flavidas	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_10777895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	651	Open in IMG/M
3300000953\|JGI11615J12901_10783790	Not Available	638	Open in IMG/M
3300001976\|JGI24752J21851_1039692	Not Available	629	Open in IMG/M
3300004114\|Ga0062593_101727288	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	685	Open in IMG/M
3300004156\|Ga0062589_100740474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	880	Open in IMG/M
3300004157\|Ga0062590_100618905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	956	Open in IMG/M
3300004157\|Ga0062590_101346371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	706	Open in IMG/M
3300004463\|Ga0063356_101094270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1148	Open in IMG/M
3300004479\|Ga0062595_101309650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	653	Open in IMG/M
3300004480\|Ga0062592_101629910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	625	Open in IMG/M
3300004480\|Ga0062592_102633741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300004643\|Ga0062591_100489387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1052	Open in IMG/M
3300005164\|Ga0066815_10077088	Not Available	595	Open in IMG/M
3300005169\|Ga0066810_10039329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	882	Open in IMG/M
3300005218\|Ga0068996_10011878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1242	Open in IMG/M
3300005290\|Ga0065712_10091596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2338	Open in IMG/M
3300005330\|Ga0070690_100208669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1362	Open in IMG/M
3300005332\|Ga0066388_102064526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1024	Open in IMG/M
3300005334\|Ga0068869_100000169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	32897	Open in IMG/M
3300005334\|Ga0068869_102134227	Not Available	503	Open in IMG/M
3300005340\|Ga0070689_100153704	All Organisms → cellular organisms → Bacteria → Proteobacteria	1857	Open in IMG/M
3300005355\|Ga0070671_100422647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1142	Open in IMG/M
3300005406\|Ga0070703_10229919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	743	Open in IMG/M
3300005459\|Ga0068867_100178621	All Organisms → cellular organisms → Bacteria → Proteobacteria	1686	Open in IMG/M
3300005530\|Ga0070679_102201071	Not Available	501	Open in IMG/M
3300005545\|Ga0070695_100062049	All Organisms → cellular organisms → Bacteria	2426	Open in IMG/M
3300005564\|Ga0070664_101982165	Not Available	552	Open in IMG/M
3300005713\|Ga0066905_100706498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	866	Open in IMG/M
3300005842\|Ga0068858_100124711	All Organisms → cellular organisms → Bacteria → Proteobacteria	2410	Open in IMG/M
3300006196\|Ga0075422_10266447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	725	Open in IMG/M
3300006573\|Ga0074055_10647686	Not Available	712	Open in IMG/M
3300006579\|Ga0074054_11546917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300006881\|Ga0068865_100507496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1006	Open in IMG/M
3300006903\|Ga0075426_10316012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1144	Open in IMG/M
3300006903\|Ga0075426_10515424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	889	Open in IMG/M
3300009093\|Ga0105240_10331104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1733	Open in IMG/M
3300009148\|Ga0105243_10097428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2434	Open in IMG/M
3300009162\|Ga0075423_12888897	Not Available	526	Open in IMG/M
3300009177\|Ga0105248_11783167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	698	Open in IMG/M
3300010046\|Ga0126384_11000934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	761	Open in IMG/M
3300010373\|Ga0134128_12677084	Not Available	550	Open in IMG/M
3300010399\|Ga0134127_10627833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1106	Open in IMG/M
3300010401\|Ga0134121_13269587	Not Available	502	Open in IMG/M
3300010403\|Ga0134123_12346714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	598	Open in IMG/M
3300011119\|Ga0105246_10034617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3368	Open in IMG/M
3300011119\|Ga0105246_10165299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus flavidas	1689	Open in IMG/M
3300012479\|Ga0157348_1004508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	797	Open in IMG/M
3300012484\|Ga0157333_1011074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	673	Open in IMG/M
3300012497\|Ga0157319_1006708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	834	Open in IMG/M
3300012885\|Ga0157287_1041471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	694	Open in IMG/M
3300012893\|Ga0157284_10151272	Not Available	659	Open in IMG/M
3300012895\|Ga0157309_10006176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2289	Open in IMG/M
3300012897\|Ga0157285_10382019	Not Available	502	Open in IMG/M
3300012898\|Ga0157293_10000902	All Organisms → cellular organisms → Bacteria → Proteobacteria	2986	Open in IMG/M
3300012900\|Ga0157292_10028893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1382	Open in IMG/M
3300012901\|Ga0157288_10408318	Not Available	510	Open in IMG/M
3300012907\|Ga0157283_10002924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2467	Open in IMG/M
3300012908\|Ga0157286_10151969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	738	Open in IMG/M
3300012910\|Ga0157308_10126159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	788	Open in IMG/M
3300012943\|Ga0164241_10134553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1770	Open in IMG/M
3300012957\|Ga0164303_10000188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12568	Open in IMG/M
3300012987\|Ga0164307_11612861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	549	Open in IMG/M
3300012989\|Ga0164305_10491475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	963	Open in IMG/M
3300013306\|Ga0163162_10183709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2217	Open in IMG/M
3300014320\|Ga0075342_1041181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1111	Open in IMG/M
3300014969\|Ga0157376_10564875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1128	Open in IMG/M
3300015371\|Ga0132258_11623962	All Organisms → cellular organisms → Bacteria → Proteobacteria	1631	Open in IMG/M
3300015371\|Ga0132258_11801308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1543	Open in IMG/M
3300015372\|Ga0132256_101179963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	879	Open in IMG/M
3300015373\|Ga0132257_101638079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	824	Open in IMG/M
3300015373\|Ga0132257_103800018	Not Available	549	Open in IMG/M
3300015374\|Ga0132255_100302652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2302	Open in IMG/M
3300015374\|Ga0132255_103688573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300019356\|Ga0173481_10137533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	991	Open in IMG/M
3300019356\|Ga0173481_10139316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	987	Open in IMG/M
3300022898\|Ga0247745_1011539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1195	Open in IMG/M
3300022901\|Ga0247788_1004219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2294	Open in IMG/M
3300023057\|Ga0247797_1045666	Not Available	621	Open in IMG/M
3300023066\|Ga0247793_1003483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2145	Open in IMG/M
3300023072\|Ga0247799_1002631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2487	Open in IMG/M
3300023072\|Ga0247799_1060912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639	Open in IMG/M
3300023073\|Ga0247744_1001800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2378	Open in IMG/M
3300023102\|Ga0247754_1004757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2636	Open in IMG/M
3300023261\|Ga0247796_1000015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	31729	Open in IMG/M
3300023261\|Ga0247796_1001436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2991	Open in IMG/M
3300023263\|Ga0247800_1000377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6992	Open in IMG/M
3300025271\|Ga0207666_1001993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2438	Open in IMG/M
3300025321\|Ga0207656_10464405	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300025899\|Ga0207642_10070098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1665	Open in IMG/M
3300025901\|Ga0207688_10000144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	30228	Open in IMG/M
3300025901\|Ga0207688_10238848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1098	Open in IMG/M
3300025904\|Ga0207647_10053332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2492	Open in IMG/M
3300025912\|Ga0207707_10115725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2343	Open in IMG/M
3300025921\|Ga0207652_10284204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1493	Open in IMG/M
3300025927\|Ga0207687_10638240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	900	Open in IMG/M
3300025931\|Ga0207644_10455930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1051	Open in IMG/M
3300025931\|Ga0207644_10982674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	708	Open in IMG/M
3300025934\|Ga0207686_11718167	Not Available	519	Open in IMG/M
3300025937\|Ga0207669_11909162	Not Available	507	Open in IMG/M
3300025942\|Ga0207689_11779408	Not Available	509	Open in IMG/M
3300025945\|Ga0207679_10392049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1220	Open in IMG/M
3300025945\|Ga0207679_11885674	Not Available	545	Open in IMG/M
3300025945\|Ga0207679_12064746	Not Available	518	Open in IMG/M
3300025981\|Ga0207640_12194973	Not Available	501	Open in IMG/M
3300026041\|Ga0207639_10089712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2457	Open in IMG/M
3300026054\|Ga0208659_1020202	Not Available	526	Open in IMG/M
3300026075\|Ga0207708_11581469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	576	Open in IMG/M
3300026088\|Ga0207641_10598091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1079	Open in IMG/M
3300026118\|Ga0207675_100131691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2372	Open in IMG/M
3300026658\|Ga0207573_100740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	566	Open in IMG/M
3300026715\|Ga0207604_100801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	786	Open in IMG/M
3300026761\|Ga0207495_100021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2323	Open in IMG/M
3300026802\|Ga0207511_104394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	665	Open in IMG/M
3300026960\|Ga0207582_1021064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	613	Open in IMG/M
3300027122\|Ga0207538_1001026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1354	Open in IMG/M
3300027695\|Ga0209966_1054865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	853	Open in IMG/M
3300027876\|Ga0209974_10019136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2270	Open in IMG/M
3300027876\|Ga0209974_10129320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	899	Open in IMG/M
3300027876\|Ga0209974_10201916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	734	Open in IMG/M
3300031847\|Ga0310907_10607734	Not Available	596	Open in IMG/M
3300031858\|Ga0310892_10312214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	995	Open in IMG/M
3300031892\|Ga0310893_10087333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1119	Open in IMG/M
3300031908\|Ga0310900_10869942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	733	Open in IMG/M
3300031940\|Ga0310901_10012135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2334	Open in IMG/M
3300032012\|Ga0310902_10032739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2408	Open in IMG/M
3300032075\|Ga0310890_10055008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2297	Open in IMG/M
3300032075\|Ga0310890_11168576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	625	Open in IMG/M
3300033475\|Ga0310811_10189675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2527	Open in IMG/M
3300033551\|Ga0247830_10270224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1294	Open in IMG/M
3300034819\|Ga0373958_0005731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1902	Open in IMG/M
3300034820\|Ga0373959_0025236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1167	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.54%
Host-Associated	Host-Associated	40.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.78%
Plants	Host-Associated → Plants	40.46%
Aquatic	Environmental → Aquatic	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.56%
Marine	Environmental → Aquatic → Marine	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.40%
Loam	Environmental → Terrestrial → Soil → Loam	7.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.53%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	19.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.53%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	10.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.58%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.05%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.29%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.53%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.53%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.53%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.53%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.76%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012479	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.yng.030610	Environmental	Open in IMG/M
3300012484	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510	Environmental	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026054	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026658	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G09K4-12 (SPAdes)	Environmental	Open in IMG/M
3300026715	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-A (SPAdes)	Environmental	Open in IMG/M
3300026761	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A5-11 (SPAdes)	Environmental	Open in IMG/M
3300026802	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-C (SPAdes)	Environmental	Open in IMG/M
3300026960	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A5-10 (SPAdes)	Environmental	Open in IMG/M
3300027122	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_107778952	3300000363	Soil	MKRQGSIYAAAMLALICAGLHGEARAQVFDFGQIEEFESLGSGTQKGSSPPKTIVDDGARHT
JGI11615J12901_107837901	3300000953	Soil	MKRRIWVFAAAMLALIHAGLQSGAHAQVFDFGQIEEFESLGSGTQKGGSPPKTIVDDGGRHTVLFTILESNTEAKIYWKSKDGSQTTIIRGQGLRAFQTV
JGI24752J21851_10396922	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTIMRGQGLRAFQTI
Ga0062593_1017272882	3300004114	Soil	MAMKRRIWVFAAAMLPLIYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLRAFQTV
Ga0062589_1007404741	3300004156	Soil	MKRQSSIYAAAMLALICAGLHGEARAQVFDFGQIEEFESLGSGTQKGSSPPKTIVDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLR
Ga0062590_1006189051	3300004157	Soil	MAMKRQVSIYVAAMLVLIYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQ
Ga0062590_1013463711	3300004157	Soil	MKRQSSIYAAAMLALICAGLHGEARAQVFDFGQIEEFESLGSGTQKGSSPPKTIVDDGARHTVL
Ga0063356_1010942702	3300004463	Arabidopsis Thaliana Rhizosphere	MKRRIWVFAAAMLALIHAGLQSGAHAQVFDFGQIEEFESLGSGTQKGGSPPKTIVDDGGRHTVLFTILESNTEAKIYW
Ga0062595_1013096502	3300004479	Soil	MAMKRQSSIYVAAMLALIYAGLHGEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESN
Ga0062592_1016299101	3300004480	Soil	MRHQIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGIQKGGTSPKTIVDDDARHTVLFTILESNTEAKIYW
Ga0062592_1026337411	3300004480	Soil	MAMKRQVSIYVAAMLALIYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNT
Ga0062591_1004893871	3300004643	Soil	MKRQSSIYAAAMLALICAGLHGEARAQVFDFGQIEEFESLGSGTQKGSSPPKTIVDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLRAFQTVGEFRIE
Ga0066815_100770881	3300005164	Soil	MKRQASIYVAAMLALIYAGPQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQ
Ga0066810_100393292	3300005169	Soil	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLRAFQTVGEFR
Ga0068996_100118783	3300005218	Natural And Restored Wetlands	MAMKRRIWVFAAAMLAQNYAGLQSRAHAQVFDFGQIEEFESLGSGTQKGSSPQKTIVDDGGRHTVLFTILESNTEAKIYWK
Ga0065712_100915964	3300005290	Miscanthus Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTV
Ga0070690_1002086691	3300005330	Switchgrass Rhizosphere	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTI
Ga0066388_1020645261	3300005332	Tropical Forest Soil	MKRQILQCAVAILALLCAGIQSGARAQVFDFGQIEEFESLGSGTQTGGSPSKTIVDDNQRHTVLFTILESNTEAKIYWKTKDGSQTTIIRGQGLRAFQTDGEFRIEA
Ga0068869_1000001691	3300005334	Miscanthus Rhizosphere	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILES
Ga0068869_1021342271	3300005334	Miscanthus Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEA
Ga0070689_1001537044	3300005340	Switchgrass Rhizosphere	MKRQGSIYVAAVLALIYAGLHGEAHAQMFDFGQIEEFESLGSGTQKGGAPAKTIIDDGARHTVMFTILESNTE
Ga0070671_1004226472	3300005355	Switchgrass Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILES
Ga0070703_102299192	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILE
Ga0068867_1001786213	3300005459	Miscanthus Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILE
Ga0070679_1022010711	3300005530	Corn Rhizosphere	MRLSIWVFAAAMMTLTYAGLQSGTHAQVFDFGQIEEFESLGSGTQKGGVAPKTIVDDGGRHTVLFTILESNTEAKIYWKS
Ga0070695_1000620491	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAK
Ga0070664_1019821651	3300005564	Corn Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNT
Ga0066905_1007064982	3300005713	Tropical Forest Soil	MKRQVLICAVAILALLCAYLQPGARAQVFDFGQIEEFESLGSGTQTGGSPPKTIVDDKERHTVLFTILESNTEAKIYWKSKDGSQTTTIRGQGL
Ga0068858_1001247113	3300005842	Switchgrass Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTI
Ga0075422_102664472	3300006196	Populus Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILES
Ga0074055_106476862	3300006573	Soil	MSMKRQASIYVAAMLALIYAGPQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKI
Ga0074054_115469171	3300006579	Soil	MTRQVSIYAAAVLALIYAGPQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDG
Ga0068865_1005074961	3300006881	Miscanthus Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNT
Ga0075426_103160121	3300006903	Populus Rhizosphere	MKRQVLIYAVAVLALLYAGLQSEARAQVFDFGQIEEFESLGSGTQTGGSPPKAIVDDKERHTVLFTI
Ga0075426_105154241	3300006903	Populus Rhizosphere	MKRQGSIYVAAVLALIYAGLHGEARAQMFDFGQIEEFESLGSGTQKGGAPAKTIIDDGARHTVMFTILESNTEAKIHWKSKDGSQTTIMRGQGLRAF
Ga0105240_103311041	3300009093	Corn Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKI
Ga0105243_100974283	3300009148	Miscanthus Rhizosphere	MSMKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNT
Ga0075423_128888972	3300009162	Populus Rhizosphere	MAMRRQIWVFATAMLALIYPDLQSGARAQVFDFGQIEEFESLGSGTQTGGSPPKTIVDD
Ga0105248_117831671	3300009177	Switchgrass Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVL
Ga0126384_110009342	3300010046	Tropical Forest Soil	MAMKRQVLIGAAAILALLCVSLRSGAQAQVFDFGQIEEFESLGSGIQKGGASPKTIVDDGARHTVLFTILESN
Ga0134128_126770841	3300010373	Terrestrial Soil	MRLSIWVFAAAMMTLTYAGLQSGTHAQVFDFGQIEEFESLGSGTQKGGAPAKTIIDDGARHTV
Ga0134127_106278331	3300010399	Terrestrial Soil	MAMKRQVSIYVAAMLVLIYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQG
Ga0134121_132695871	3300010401	Terrestrial Soil	MRLSIWVFAAAMMTLTYAGLQSGTHAQVFDFGQIEEFESLGSGTQKGGVAPKTIVDDGGRHTVLFTILESNTEAKIYWKSKDGNQTTIMRGQGLRAF
Ga0134123_123467142	3300010403	Terrestrial Soil	MAMKRRIWVFAAAMLPLIYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAK
Ga0105246_100346176	3300011119	Miscanthus Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTI
Ga0105246_101652991	3300011119	Miscanthus Rhizosphere	MAMKRRIWVFAAAMLPLIYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNT
Ga0157348_10045081	3300012479	Unplanted Soil	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTIL
Ga0157333_10110741	3300012484	Soil	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKD
Ga0157319_10067082	3300012497	Arabidopsis Rhizosphere	MSMKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLRAFQTVGEFR
Ga0157287_10414712	3300012885	Soil	MSMKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIVRG
Ga0157284_101512721	3300012893	Soil	MKRQVSIYVSALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLRAFQTV
Ga0157309_100061763	3300012895	Soil	MAMRHRIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILES
Ga0157285_103820191	3300012897	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTII
Ga0157293_100009021	3300012898	Soil	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIIRGQGLRAFQTIGEFR
Ga0157292_100288933	3300012900	Soil	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHW
Ga0157288_104083181	3300012901	Soil	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIY
Ga0157283_100029241	3300012907	Soil	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEATIYWKSKDGSQTT
Ga0157286_101519691	3300012908	Soil	MAMRHQIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGIQKGGTSPKTIVDDDARHTVLFTI
Ga0157308_101261591	3300012910	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTIMRGQGLRAFQ
Ga0164241_101345531	3300012943	Soil	MQCGEVMVMKRQLSLCVAAMLALVCLQTQAYAQVFDFGQIEEFESLGSGTQTGGSPPKTIVDDGARHTVLFTILESNTEAKIYWRSKDGNQT
Ga0164303_1000018818	3300012957	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGAR
Ga0164307_116128611	3300012987	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIID
Ga0164305_104914751	3300012989	Soil	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTV
Ga0163162_101837091	3300013306	Switchgrass Rhizosphere	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTIMRGQ
Ga0075342_10411812	3300014320	Natural And Restored Wetlands	MAMKRRIWVFAAAMLTQNYAGLQSGAHAQVFDFGQIEEFESLGSGTQKGGSPQKTIVDDGGRHTVLFTILESNTEAKIYWKSKDGSQITIIRGQGLRAFQTVGEFRIEA
Ga0157376_105648752	3300014969	Miscanthus Rhizosphere	MSMKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILES
Ga0132258_116239623	3300015371	Arabidopsis Rhizosphere	MAMKRRIWVFAAAMLALIYAGLQSGAHAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLRAFQTVGEFRI
Ga0132258_118013083	3300015371	Arabidopsis Rhizosphere	MSMKRQASIYVSAMLALIYAGPQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILES
Ga0132256_1011799631	3300015372	Arabidopsis Rhizosphere	MKRQGSIYVAAVLALIYAGLHGDARAQMFDFGQIEEFESLGSGTQKGGAPAKTIIDDGARHTVMFTILESNTEAKIHWKSKDGSQTTIMRGQGLRA
Ga0132257_1016380792	3300015373	Arabidopsis Rhizosphere	MSMKRQASIYVSAMLALIYAGPQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGS
Ga0132257_1038000181	3300015373	Arabidopsis Rhizosphere	MKRRIWVFAAAMLALIYAVLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDG
Ga0132255_1003026523	3300015374	Arabidopsis Rhizosphere	MSMKRQASIYVAAMLALIYAGPQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRG
Ga0132255_1036885732	3300015374	Arabidopsis Rhizosphere	MKRQGSIYVAAVLALIYAGLHGGARAQMFDFGQIEEFESLGSGTQKGGAPAKTIIDDGARHTVMFTILESNTEAKIHWKSKDGSQTTIMRGQGLRAFQ
Ga0173481_101375332	3300019356	Soil	MAMKRQLSKWAAAMLLALTGLQPQAYAQVFDFGQIEEFESLGSGTQTGGSPPKTIVDDGERHTVLFTILESNTEAKIYWKS
Ga0173481_101393161	3300019356	Soil	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTIMRGQGLRA
Ga0247745_10115391	3300022898	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTIVRG
Ga0247788_10042191	3300022901	Soil	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIH
Ga0247797_10456661	3300023057	Soil	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLRA
Ga0247793_10034831	3300023066	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSK
Ga0247799_10026313	3300023072	Soil	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLRAF
Ga0247799_10609122	3300023072	Soil	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVL
Ga0247744_10018001	3300023073	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTIVRGQ
Ga0247754_10047574	3300023102	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTIVR
Ga0247796_10000151	3300023261	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTIV
Ga0247796_10014361	3300023261	Soil	MSMKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGS
Ga0247800_100037712	3300023263	Soil	MSMKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGL
Ga0207666_10019931	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MSMKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSK
Ga0207656_104644051	3300025321	Corn Rhizosphere	MLEGLIANAVLLAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHW
Ga0207642_100700983	3300025899	Miscanthus Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWK
Ga0207688_100001441	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKS
Ga0207688_102388481	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLRAFQTVG
Ga0207647_100533323	3300025904	Corn Rhizosphere	MSMKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLRAFQTVGEF
Ga0207707_101157253	3300025912	Corn Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKD
Ga0207652_102842041	3300025921	Corn Rhizosphere	MSMKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLRAFQTV
Ga0207687_106382402	3300025927	Miscanthus Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQ
Ga0207644_104559301	3300025931	Switchgrass Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESSTEA
Ga0207644_109826741	3300025931	Switchgrass Rhizosphere	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTT
Ga0207686_117181671	3300025934	Miscanthus Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGLRAFQTVGE
Ga0207669_119091621	3300025937	Miscanthus Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGS
Ga0207689_117794081	3300025942	Miscanthus Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKI
Ga0207679_103920491	3300025945	Corn Rhizosphere	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGAR
Ga0207679_118856741	3300025945	Corn Rhizosphere	MAMKRRIWVFAAAMLPLIYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKI
Ga0207679_120647461	3300025945	Corn Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTE
Ga0207640_121949731	3300025981	Corn Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESN
Ga0207639_100897124	3300026041	Corn Rhizosphere	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTI
Ga0208659_10202021	3300026054	Natural And Restored Wetlands	MAMKRRIWVFAAAMLAQNYAGLQSRAHAQVFDFGQIEEFESLGSGTQKGSSPQKTIVD
Ga0207708_115814692	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MAMKRRIWVFAAAMLPLIYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTIL
Ga0207641_105980912	3300026088	Switchgrass Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWK
Ga0207675_1001316911	3300026118	Switchgrass Rhizosphere	MSMKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTV
Ga0207573_1007401	3300026658	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDD
Ga0207604_1008011	3300026715	Soil	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIMRGQGL
Ga0207495_1000211	3300026761	Soil	MSMKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQTGGSPPKTIVDDGERHTVLFTILESNTEAKIYWKSKDGSQTTIIRGQ
Ga0207511_1043941	3300026802	Soil	MAMKRQSSIYVAAMLALIYAGLHGEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEA
Ga0207582_10210642	3300026960	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGIQKGGTSPKTIVDDDARHTVLFTILESNTEA
Ga0207538_10010261	3300027122	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKS
Ga0209966_10548651	3300027695	Arabidopsis Thaliana Rhizosphere	MKRQVSIYVAAMLALIYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGAR
Ga0209974_100191361	3300027876	Arabidopsis Thaliana Rhizosphere	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTI
Ga0209974_101293202	3300027876	Arabidopsis Thaliana Rhizosphere	MSMKRQVSIYVAAMLALIYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEA
Ga0209974_102019162	3300027876	Arabidopsis Thaliana Rhizosphere	MSMKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEA
Ga0310907_106077341	3300031847	Soil	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTIMRGQGLRAFQTIGEFR
Ga0310892_103122142	3300031858	Soil	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHT
Ga0310893_100873331	3300031892	Soil	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTIVRGQGLRAFQT
Ga0310900_108699421	3300031908	Soil	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAK
Ga0310901_100121353	3300031940	Soil	MAMRHRIWVFAAAILALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSK
Ga0310902_100327391	3300032012	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDGSQTTIMRGQGLRAFQTIGE
Ga0310890_100550081	3300032075	Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLF
Ga0310890_111685762	3300032075	Soil	MKRQASIYVSAMLALIYAGPQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTIL
Ga0310811_101896754	3300033475	Soil	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIYWKSKDGSQTTIM
Ga0247830_102702241	3300033551	Soil	MKRQVSIYVAALLALLYAGLQSGARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLF
Ga0373958_0005731_1722_1901	3300034819	Rhizosphere Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDG
Ga0373959_0025236_1_255	3300034820	Rhizosphere Soil	MAMRHQIWVFAAAMLALICAGLQSEARAQVFDFGQIEEFESLGSGTQKGGSPPKTIIDDGARHTVLFTILESNTEAKIHWKSKDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061958

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences