Metagenome / Metatranscriptome Family F059489

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059489
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	73 residues
Representative Sequence	MARRNDQHAVDLDTYISKNSRFKFFVYDRREIRTIADNLGFKTDRVRTELRKLGYCLITNNNGRMVWKRDGVSI
Number of Associated Samples	90
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	84.21 %
% of genes near scaffold ends (potentially truncated)	23.13 %
% of genes from short scaffolds (< 2000 bps)	77.61 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (88.806 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (16.418 % of family members)
Environment Ontology (ENVO)	Unclassified (25.373 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.328 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.37% β-sheet: 12.75% Coil/Unstructured: 55.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF08004	DUF1699	3.73
PF06210	DUF1003	3.73
PF00708	Acylphosphatase	1.49
PF00583	Acetyltransf_1	1.49
PF00702	Hydrolase	0.75
PF05854	MC1	0.75
PF03400	DDE_Tnp_IS1	0.75
PF01886	DUF61	0.75
PF06348	DUF1059	0.75
PF13420	Acetyltransf_4	0.75
PF01909	NTP_transf_2	0.75
PF01609	DDE_Tnp_1	0.75
PF00118	Cpn60_TCP1	0.75
PF01938	TRAM	0.75
PF02469	Fasciclin	0.75
PF00275	EPSP_synthase	0.75
PF17167	Glyco_hydro_36	0.75
PF04055	Radical_SAM	0.75
PF00352	TBP	0.75
PF17200	sCache_2	0.75
PF08745	PIN_5	0.75
PF13672	PP2C_2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG4420	Uncharacterized membrane protein	Function unknown [S]	3.73
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG1458	Predicted RNase MK1237, contains PIN domain, UPF0278 family	General function prediction only [R]	0.75
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.75
COG2101	TATA-box binding protein (TBP), component of TFIID and TFIIIB	Transcription [K]	0.75
COG2335	Uncaracterized surface protein containing fasciclin (FAS1) repeats	General function prediction only [R]	0.75
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.75
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.75
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.75
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.75
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.75
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.55 %
Unclassified	root	N/A	10.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.55 %
Unclassified	root	N/A	10.45 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	88.81 %
Unclassified	root	N/A	10.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Archaea → environmental samples	70.90 %
Unclassified	root	N/A	10.45 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	8.21 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.75 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	70.90 %
Unclassified	root	N/A	10.45 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	8.21 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.75 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	70.90 %
Unclassified	root	N/A	10.45 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	8.21 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.75 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	70.90 %
Unclassified	root	N/A	10.45 %
Methanotrichales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales	6.72 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	1.49 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.75 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	70.90 %
Unclassified	root	N/A	10.45 %
Methanotrichaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae	6.72 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	0.75 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.75 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	70.90 %
Unclassified	root	N/A	10.45 %
Methanothrix	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	5.97 %
unclassified Methanotrichaceae	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → unclassified Methanotrichaceae	0.75 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	0.75 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.75 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	70.90 %
Unclassified	root	N/A	10.45 %
Methanothrix soehngenii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	2.99 %
unclassified Methanothrix	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix	1.49 %
Methanosarcina mazei	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → Methanosarcina mazei	0.75 %
Methanotrichaceae archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → unclassified Methanotrichaceae → Methanotrichaceae archaeon	0.75 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.75 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	70.90 %
Unclassified	root	N/A	10.45 %
Methanothrix soehngenii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	2.99 %
Methanosaeta sp. PtaU1.Bin112	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin112	0.75 %
Methanosaeta sp. ASM2	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. ASM2	0.75 %
Methanosarcina mazei	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → Methanosarcina mazei	0.75 %
Methanotrichaceae archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → unclassified Methanotrichaceae → Methanotrichaceae archaeon	0.75 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.75 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908028\|beta3_all_NODE_114944_len_789_cov_9_634981	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	839	Open in IMG/M
2124908028\|beta3_all_NODE_31559_len_1037_cov_13_461909	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1087	Open in IMG/M
2140918024\|NODE_44100_length_1338_cov_14.720478	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1388	Open in IMG/M
3300000309\|WSSedA1BaDRAFT_1034920	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	797	Open in IMG/M
3300000311\|WSSedA1Ba3DRAFT_1002777	Not Available	4796	Open in IMG/M
3300000311\|WSSedA1Ba3DRAFT_1003519	Not Available	4206	Open in IMG/M
3300000311\|WSSedA1Ba3DRAFT_1064677	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	712	Open in IMG/M
3300001213\|JGIcombinedJ13530_101560824	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	502	Open in IMG/M
3300001213\|JGIcombinedJ13530_101615548	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	696	Open in IMG/M
3300001410\|JGI20179J14886_1003918	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1315	Open in IMG/M
3300001410\|JGI20179J14886_1015804	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	642	Open in IMG/M
3300002564\|JGI24134J36421_10055677	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1083	Open in IMG/M
3300002564\|JGI24134J36421_10127797	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	579	Open in IMG/M
3300002569\|JGI24136J36422_10019502	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	2136	Open in IMG/M
3300002569\|JGI24136J36422_10023066	Not Available	1954	Open in IMG/M
3300002961\|JGI11641J44799_10100866	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	811	Open in IMG/M
3300003432\|JGI20214J51088_10397381	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	920	Open in IMG/M
3300003852\|Ga0031655_10010644	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	4706	Open in IMG/M
3300003852\|Ga0031655_10034492	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300003852\|Ga0031655_10035491	All Organisms → cellular organisms → Archaea	2270	Open in IMG/M
3300003852\|Ga0031655_10061973	All Organisms → cellular organisms → Archaea	1595	Open in IMG/M
3300003852\|Ga0031655_10071642	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1451	Open in IMG/M
3300003852\|Ga0031655_10133072	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	977	Open in IMG/M
3300003852\|Ga0031655_10147594	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	916	Open in IMG/M
3300003852\|Ga0031655_10303343	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	597	Open in IMG/M
3300004151\|Ga0066602_10414847	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	606	Open in IMG/M
3300004282\|Ga0066599_101283253	All Organisms → cellular organisms → Archaea	551	Open in IMG/M
3300005219\|Ga0069004_10148189	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	664	Open in IMG/M
3300005323\|Ga0074198_1038552	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	872	Open in IMG/M
3300006652\|Ga0101729_1006713	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1839	Open in IMG/M
3300006883\|Ga0102488_114687	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	606	Open in IMG/M
3300006930\|Ga0079303_10090595	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → Methanosarcina mazei	1141	Open in IMG/M
3300006950\|Ga0075524_10486850	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	548	Open in IMG/M
3300008982\|Ga0116011_1116113	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	561	Open in IMG/M
3300009111\|Ga0115026_11870371	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	510	Open in IMG/M
3300009131\|Ga0115027_10731612	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	746	Open in IMG/M
3300009146\|Ga0105091_10191317	Not Available	971	Open in IMG/M
3300009167\|Ga0113563_10366888	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1523	Open in IMG/M
3300009168\|Ga0105104_10048700	Not Available	2313	Open in IMG/M
3300009168\|Ga0105104_10401039	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	763	Open in IMG/M
3300009179\|Ga0115028_10914943	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	695	Open in IMG/M
3300009502\|Ga0114951_10001518	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	28352	Open in IMG/M
3300009566\|Ga0130025_1002196	Not Available	21871	Open in IMG/M
3300009692\|Ga0116171_10001186	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	26407	Open in IMG/M
3300012964\|Ga0153916_11527994	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	743	Open in IMG/M
3300014490\|Ga0182010_10005732	All Organisms → cellular organisms → Archaea	5809	Open in IMG/M
3300014490\|Ga0182010_10006738	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	5315	Open in IMG/M
3300014490\|Ga0182010_10170474	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1130	Open in IMG/M
3300014490\|Ga0182010_10372326	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	776	Open in IMG/M
3300014494\|Ga0182017_10867806	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	543	Open in IMG/M
3300014498\|Ga0182019_10757522	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	692	Open in IMG/M
3300014498\|Ga0182019_11170887	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	564	Open in IMG/M
3300014502\|Ga0182021_10631943	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1282	Open in IMG/M
3300014502\|Ga0182021_10930619	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1045	Open in IMG/M
3300014502\|Ga0182021_10938606	Not Available	1041	Open in IMG/M
3300014502\|Ga0182021_10969444	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1023	Open in IMG/M
3300014502\|Ga0182021_11415400	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	837	Open in IMG/M
3300014502\|Ga0182021_12615305	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	607	Open in IMG/M
3300018005\|Ga0187878_1244780	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	654	Open in IMG/M
3300018005\|Ga0187878_1283625	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	596	Open in IMG/M
3300018015\|Ga0187866_1266336	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	610	Open in IMG/M
3300018018\|Ga0187886_1268288	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	642	Open in IMG/M
3300019209\|Ga0179951_1054241	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. ASM2	1686	Open in IMG/M
3300019785\|Ga0182022_1083664	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1633	Open in IMG/M
3300020163\|Ga0194039_1004490	All Organisms → cellular organisms → Archaea	6520	Open in IMG/M
3300022555\|Ga0212088_10001765	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	47095	Open in IMG/M
3300022650\|Ga0236339_1240530	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	587	Open in IMG/M
3300022830\|Ga0224515_1022048	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	933	Open in IMG/M
3300023075\|Ga0224520_1071254	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	785	Open in IMG/M
3300023311\|Ga0256681_11523791	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	632	Open in IMG/M
3300024238\|Ga0224523_1151436	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	516	Open in IMG/M
3300025443\|Ga0208081_1054921	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	649	Open in IMG/M
3300025499\|Ga0207931_1023206	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1388	Open in IMG/M
3300025499\|Ga0207931_1030430	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1162	Open in IMG/M
3300025533\|Ga0208584_1007292	Not Available	2888	Open in IMG/M
3300025548\|Ga0208716_1027270	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1326	Open in IMG/M
3300025575\|Ga0209430_1112316	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	622	Open in IMG/M
3300025692\|Ga0209744_1095129	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1032	Open in IMG/M
3300025692\|Ga0209744_1099272	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1002	Open in IMG/M
3300025692\|Ga0209744_1104755	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	967	Open in IMG/M
3300025718\|Ga0209123_1249708	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	551	Open in IMG/M
3300025739\|Ga0209745_1060996	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1364	Open in IMG/M
3300025739\|Ga0209745_1081314	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1119	Open in IMG/M
3300025852\|Ga0209124_10167226	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	883	Open in IMG/M
3300025852\|Ga0209124_10312612	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	590	Open in IMG/M
3300025891\|Ga0209585_10396537	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	563	Open in IMG/M
3300027419\|Ga0209340_1008722	All Organisms → cellular organisms → Archaea	3844	Open in IMG/M
3300027800\|Ga0209800_10304043	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	671	Open in IMG/M
3300027887\|Ga0208980_10030472	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	3141	Open in IMG/M
3300027887\|Ga0208980_10385508	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	809	Open in IMG/M
3300027890\|Ga0209496_10545052	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	621	Open in IMG/M
3300027896\|Ga0209777_10001224	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	38353	Open in IMG/M
3300027896\|Ga0209777_10005764	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	14177	Open in IMG/M
3300027896\|Ga0209777_10030257	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin112	5164	Open in IMG/M
3300027896\|Ga0209777_10049482	All Organisms → cellular organisms → Archaea	3815	Open in IMG/M
3300027896\|Ga0209777_10096621	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	2528	Open in IMG/M
3300027896\|Ga0209777_10111583	All Organisms → cellular organisms → Archaea	2312	Open in IMG/M
3300027896\|Ga0209777_10145874	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1956	Open in IMG/M
3300027896\|Ga0209777_10219366	All Organisms → cellular organisms → Archaea	1515	Open in IMG/M
3300029987\|Ga0311334_11054786	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	678	Open in IMG/M
3300030000\|Ga0311337_11701173	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	553	Open in IMG/M
3300031232\|Ga0302323_102686098	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	569	Open in IMG/M
3300031669\|Ga0307375_10155295	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1579	Open in IMG/M
3300031707\|Ga0315291_10356047	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1410	Open in IMG/M
3300031726\|Ga0302321_103113150	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	541	Open in IMG/M
3300031746\|Ga0315293_10007266	All Organisms → cellular organisms → Archaea	10291	Open in IMG/M
3300031772\|Ga0315288_10673204	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	981	Open in IMG/M
3300031885\|Ga0315285_10040503	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	4442	Open in IMG/M
3300031902\|Ga0302322_101044561	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	986	Open in IMG/M
3300031918\|Ga0311367_12118869	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	541	Open in IMG/M
3300031997\|Ga0315278_10695825	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1034	Open in IMG/M
3300031997\|Ga0315278_10720677	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1013	Open in IMG/M
3300032053\|Ga0315284_11710272	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	654	Open in IMG/M
3300032069\|Ga0315282_10055271	Not Available	4215	Open in IMG/M
3300032143\|Ga0315292_10296584	Not Available	1345	Open in IMG/M
3300032156\|Ga0315295_10541156	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1183	Open in IMG/M
3300032156\|Ga0315295_11918508	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	559	Open in IMG/M
3300032164\|Ga0315283_10373430	Not Available	1551	Open in IMG/M
3300032401\|Ga0315275_10124388	All Organisms → cellular organisms → Archaea	2845	Open in IMG/M
3300032401\|Ga0315275_11225709	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	816	Open in IMG/M
3300032401\|Ga0315275_11885269	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	633	Open in IMG/M
3300032829\|Ga0335070_10686707	Not Available	958	Open in IMG/M
3300032892\|Ga0335081_10120664	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	3833	Open in IMG/M
3300032892\|Ga0335081_12252125	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	572	Open in IMG/M
3300033419\|Ga0316601_100223255	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → unclassified Methanotrichaceae → Methanotrichaceae archaeon	1672	Open in IMG/M
3300033487\|Ga0316630_10895437	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	769	Open in IMG/M
3300033489\|Ga0299912_11313512	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	522	Open in IMG/M
3300033557\|Ga0316617_100027115	Not Available	3150	Open in IMG/M
3300033743\|Ga0334844_112900	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	538	Open in IMG/M
3300033891\|Ga0334811_109681	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	700	Open in IMG/M
3300034128\|Ga0370490_0242087	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	595	Open in IMG/M
3300034195\|Ga0370501_0099230	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	978	Open in IMG/M
3300034281\|Ga0370481_0029682	All Organisms → cellular organisms → Archaea	1653	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.01%
Engineered	Engineered	2.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.25%
Aquatic	Environmental → Aquatic	47.76%
Wastewater	Engineered → Wastewater	1.49%
Bioremediation	Engineered → Bioremediation	1.49%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	39.55%
Soil	Environmental → Terrestrial → Soil	39.55%
Marine	Environmental → Aquatic → Marine	8.21%
Peat	Environmental → Terrestrial → Peat	8.21%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.49%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	1.49%
Tetrachloroethylene And Derivatives	Engineered → Bioremediation → Tetrachloroethylene And Derivatives	1.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.16%
Lake	Environmental → Aquatic → Freshwater → Lake	14.93%
Lentic	Environmental → Aquatic → Freshwater → Lentic	11.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	8.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.21%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.48%
Pond	Environmental → Aquatic → Freshwater → Pond	2.24%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	1.49%
Tetrachloroethylene	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene	1.49%
Clay	Environmental → Terrestrial → Soil → Clay	0.75%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.75%
Aquifer	Environmental → Terrestrial → Deep Subsurface → Aquifer	0.75%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	18.66%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	11.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	11.19%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.21%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	7.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.97%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.99%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	2.24%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.49%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	1.49%
Unclassified	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified	1.49%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.75%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.75%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	16.42%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	11.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	11.19%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	10.45%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	7.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.48%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.48%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	3.73%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.24%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.24%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.24%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.24%
Sediment	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Sediment	1.49%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	1.49%
Bioremediated Contaminated Groundwater	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified → Bioremediated Contaminated Groundwater	1.49%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.75%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.75%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.75%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.75%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Sediment	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.75%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.75%
Aquifer Solids	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified → Aquifer Solids	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908028	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2140918024	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000309	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300000311	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001410	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012	Environmental	Open in IMG/M
3300002564	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312	Environmental	Open in IMG/M
3300002569	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004151	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300005219	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2	Environmental	Open in IMG/M
3300005323	Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-23	Engineered	Open in IMG/M
3300006652	Combined Assembly of Gp0123698, Gp0123960, Gp0123961	Environmental	Open in IMG/M
3300006883	T10 (1) BES, Syntrophic microbial communities from anoxic layer of the sediment of River Tyne near Scotswood, United Kingdom - benzoate enriched in lab, transferred 6 times	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300008982	Combined Assembly of De NOVO T5 (live) Tyne Sediment Benzoate Gp0125094, Gp0125095, Gp0125096	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009566	Methanogenic o-xylene degrading microbial communities from aquifer solids in Pensacola, Florida - enrichment culture X8-AB	Environmental	Open in IMG/M
3300009692	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG	Engineered	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300019209	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNHW3_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020163	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8m	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022650	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W3	Environmental	Open in IMG/M
3300022830	Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T-25	Environmental	Open in IMG/M
3300023075	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300024238	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T50	Environmental	Open in IMG/M
3300025443	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025499	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025575	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-33A (SPAdes)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025718	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-31A (SPAdes)	Environmental	Open in IMG/M
3300025739	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300027419	Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-23 (SPAdes)	Engineered	Open in IMG/M
3300027800	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033743	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 5-9	Environmental	Open in IMG/M
3300033891	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-D	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
beta3_all_01210880	2124908028	Soil	MDRGEDQHAVDVDIYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRRLGYCLIKNNNGRMVWKRDGVSI
beta3_all_00029310	2124908028	Soil	MDRGEDQHAVDVSTYISKNGRFKSFVYDSREIRTIANNLGLKTDCVRAELRKLGYCLIMNNNGRMVWKRDGVSI
B_all_v_02386610	2140918024	Soil	MDRGEDQHAVDVSTYISKNGRFKSFVYDSREIRTIANNLGLKTDCVRAELRKLGYCLIMNNNGRMVWKRAGVSI
WSSedA1BaDRAFT_10349202	3300000309	Wetland	AVDLDTYLSRNSRFKSFVYDRREIRTIADNLGIKTDRVRTELRKLSYCLIKNNNGRMVWKRDVACI*
WSSedA1Ba3DRAFT_10027777	3300000311	Wetland	LAQRKDQHAVDLDTYLSRNSRFKSFVYDRREIRTIADNLGIKTDRVRTELRKLSYCLIKNNNGRMVWKRDVACI*
WSSedA1Ba3DRAFT_10035193	3300000311	Wetland	MARCNDQHIADLKTYLSENSRFKFFISDHREIRTIADNLGFKTDRVRNELRKEGYCLIKNNNGRMVWKRDVACNDGEA*
WSSedA1Ba3DRAFT_10646772	3300000311	Wetland	MAMGDDQHAADLDTYLLKNRRFRSLVYDHREIRCIADNLGFNPDHVRTGLRKLGYCLIQNNHGRMVWKRDAACI*
JGIcombinedJ13530_1015608241	3300001213	Wetland	ISKNSRFKSFVYDRREIRTIAYNLLLKTDRVRTELRKLGYCLIENNNGRKVWKRYGVSI*
JGIcombinedJ13530_1016155481	3300001213	Wetland	MARCDDQHAVDLDTYISKNGRFKFFVYDRREIQTIANNLGLKTDRVRNELRKLGYYLIKNNGRMVWKRDGESI*
JGI20179J14886_10039184	3300001410	Arctic Peat Soil	MDRGEDQHAVDVDIYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRRLGYCLIKNNNGRMVWKR
JGI20179J14886_10158041	3300001410	Arctic Peat Soil	SRHNQVSEPEAQAMAQSNDQHAIGVDAIYFKEWPIQTFVYDSREIRTIANNLGLNTDCVRTELRKLGYCLIMNNNGRMVWKRDGVSI*
JGI24134J36421_100556773	3300002564	Arctic Peat Soil	MDRGEDQHAVDVDIYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRRLGYCLIKNNNGRMVWKRDGVSI*
JGI24134J36421_101277971	3300002564	Arctic Peat Soil	MDRGEDQHAPDVGTYISKNSRFKSFVYDRREILIIANNLGLKTDRVRAELRRLGYCLVMNNNGRMVWKRGGVSI*
JGI24136J36422_100195022	3300002569	Arctic Peat Soil	MAQSNDQRAIDVGTYISKNGRFRSFVYDSREIRTIANNLGLKTDYVRAELRKLGYCLIMNNNGRMVWKRDGVSI*
JGI24136J36422_100230661	3300002569	Arctic Peat Soil	MDQGEDQHAIDVDTYISKNSRFKSFVYDRREILTIANNLGLKTECVRAELRRLGYCLIMNNNGRMVWKRDSM*
JGI11641J44799_101008663	3300002961	Wetland	MARCNDQHIADLKTYLSENSRFKFFISDHREIRTIADNLGFKTDRVRNELRKEGYCLIKNNNGRMVWRRDVACNDGEA*
JGI20214J51088_103973812	3300003432	Wetland	LARRNDQHAVDLDTYISKNSRFKSFVYDRREIRTIADNLGLKADRVRAELRKLGYCLVENNNGRMVWKRDAACK*
Ga0031655_100106441	3300003852	Freshwater Lake Sediment	MVRRNDLHAIDLDTYISKNSRFKFFVYDRREIRTIADNLGFKTDRVRIELRKLGYCLITNNNGRMVWKRYGVSM*
Ga0031655_100344923	3300003852	Freshwater Lake Sediment	MARCDDQHATDLDTYISKNGRFKSFVFDRREIRSIADNLGFKTDRVRTELRKLGYCLIKNNNGRMIWKRDGVSIFR*
Ga0031655_100354914	3300003852	Freshwater Lake Sediment	MARRKDQRVDICTYILKNYRFKSFVYDRREILTIANNLGFKTDHVRTELRRLSYCLIKNNNGRMVWKRDQLGRTSLKIMGV*
Ga0031655_100619732	3300003852	Freshwater Lake Sediment	MTRRNDQHVVDLKTYLSKNSRFKFFVYDRREIRTIADNLGFKTDRVRTELRKLGYCLITNNNGRMVWKRDQLGRTSLKIMGV*
Ga0031655_100716423	3300003852	Freshwater Lake Sediment	MAQRNDQHAVDLDTYILKNSRFKFLVYDSREIRTIADNLGLKTDRVRTELRXLGXCLIKSNNGRMVWKRDVAYI*
Ga0031655_101330722	3300003852	Freshwater Lake Sediment	MARRNDQHVVDINTYLSKNSRFKFFIYDRREIRTIADILGFKTDRVRIELRKLGYCLIKNDNGRMLWKXKM*
Ga0031655_101475942	3300003852	Freshwater Lake Sediment	MARCDDQHAADLDTYISKNGRFKSFVFDRREIRSIADNLGFKTDRVRTELRKLGYCLIKNNNGRMIWKRDGVSIFR*
Ga0031655_103033431	3300003852	Freshwater Lake Sediment	MAQRNDQHAVDLDTYILKNSRFKFLVYDSREIRTIADNLGLKADRVRTELRKLGYCLIKSNNGRMVWKRDVAYI*
Ga0066602_104148472	3300004151	Freshwater	MARCNDQHALDVDTYISKNSRFKSFVYDRREILTISNNLGLKTDRVRTELRKLGYCLIENNNGRKVWKRYGVSI*
Ga0066599_1012832531	3300004282	Freshwater	EAQAMARCNDQHALDVDTYISKNSRFKSFVYDRREILTISNNLGLKTDRVRTELRKLGYCLIENNNGRKVWKRYGVSI*
Ga0069004_101481891	3300005219	Natural And Restored Wetlands	LARRNDQHAVDLDTYISKNSRFKSFVYDRREIRTIADNLGIKADRVRAELRKLGYCLVENNNGRMVWKRNVACK*
Ga0074198_10385521	3300005323	Bioremediated Contaminated Groundwater	MARRKNQHAVDVNAYISDNSRFKFFVYDLREIRTIADNLGFKPDHVRTELRKLGYCLIKNSNGRMIWKRDRVCTI*
Ga0101729_10067132	3300006652	Sediment	MTQSNDQHAVDVDTYISKNSRFKSFVYDRGEIRTIAENLGFKTDHVRTELRKLGYSLIKNSSHGRMIWKRDQLERTSLTIAGI*
Ga0102488_1146871	3300006883	Sediment	AMTQSNDQHAVDVDTYISKNSRFKSFVYDRGEIQTIAENLGFKTDHVRTEIRKLGYRLIKNSSHGRMIWKRDQLERTSLTIAGI*
Ga0079303_100905951	3300006930	Deep Subsurface	DQRAENLDTYISKNSRFKSFVYDSREIRTIADNLGIKTDRVSTELRKLGYCLINNNNGRMVWKRDVACI*
Ga0075524_104868502	3300006950	Arctic Peat Soil	MAQSNDQHAIDVDTYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRRLGYCLIKNNNGRMVWKRDGVSI*
Ga0116011_11161131	3300008982	Sediment	MTQSNDQHAVDVDTYISKNSRVKSFVYDRGEIRTIAENLGFKTDHVRTELRKLGYSLIKNSSHGRMIWK
Ga0115026_118703711	3300009111	Wetland	VQAMARRKDQHAVDLDTYISKNSRFKSFVYDRKKIFTIANNLGFKTDRVRAEHRKLGYCLIENNNG
Ga0115027_107316121	3300009131	Wetland	IKTYLSKNKRFKSFIYDHREIRNIADNLGCKTDHVRSELKNLGYSLIKNSNGQMVWKKKSVMA*
Ga0115027_107667331	3300009131	Wetland	SKNGRFKSLVYDRREIRAIAVNLGYKTDRVRTELRKLGYCLVKSNNGRMVWMKDVACI*
Ga0105091_101913172	3300009146	Freshwater Sediment	DTYISKNSRFKSFVYDRREILTIANNLGFKTDRVRTELRKLGYCLIENNNGRMVWKRDGVSI*
Ga0113563_103668882	3300009167	Freshwater Wetlands	MAMGDDQHAADLDTYLLKNLIFLSLVYDHREIRCIADNLGFNPDHVRTGLRKLGYCLIQNKHGRMVWKRDAACI*
Ga0105104_100487002	3300009168	Freshwater Sediment	MAQRNDQHAVDVDTYISKNSRFKSFVYDRREILTIANNLGFKTDHVRTELRKLGYCLIENNNGRMVWKRDGVSI*
Ga0105104_104010392	3300009168	Freshwater Sediment	MAQSNDQHAIDVDTYISKNRRFKSFVYDNREIRTIANNLGFKTDRVRTELRKLGYCLIENNNGRMVWKRDGVSIRERSVL*
Ga0115028_109149431	3300009179	Wetland	MARRKDQHAVDLDTYITKNSRFKSFVYDRREIRTIAANLGFKTDRVRTELRKLGYCLIKNNNGRMVWKRNVACI*
Ga0114951_1000151824	3300009502	Freshwater	MAQSNDQHAIGVDTYISKNSRFKSFVYDRREILIIANNLGLKTDRVRAELRRLGYCLVMNSNGRMVWKRGGVSI*
Ga0130025_100219637	3300009566	Aquifer Solids	MARRNNQHSLDLNIYLSKNDRFKFFVFDRREIRTIADNLGFKTDRVHIELRKLGYCLIKNNNGLMVWKRDGACI*
Ga0116171_100011862	3300009692	Anaerobic Digestor Sludge	MQRNDLDSYILRNSRFKFFIFDRREIRTIADNLEFKTGRVRTELRKLGYRLIKNSHGQMVWKRECLLP*
Ga0153916_115279941	3300012964	Freshwater Wetlands	MARRDDQHATDLDIYISRNDRFKASVYDRREIRCIADNLGFAPDRVRSELRKLGYCLTKNTHGRMIWKRDGTSI*
Ga0182010_100057329	3300014490	Fen	MARRNDQHAVDLDTYISKNSRFKFFVYDRREIRTIADNLGFKTDRVRTELRKLGYSLIKNDNGRMVWRRYVACI*
Ga0182010_100067384	3300014490	Fen	MARCDDQHAADLDTYISKNGRFKSFVFDRREIRSIADNLGFKTDRVRTELRKLGYCLIKDNNGRMIWKRDGVSIFR*
Ga0182010_101704741	3300014490	Fen	MAQSNDQHAIGVDAYISKNCRFKSFVYDSREIRTIANNLGLKTDCVRTELRKLGYCLIMNNNGRMVWKRDGVSI*
Ga0182010_103723261	3300014490	Fen	AQKMTQSNDQHAVDVGIYISKNGRFRSFVYDSREIRTIANNLGLKTDFVRTELRKLGYSLIMNNNGRMVWKRDGVSM*
Ga0182017_108678061	3300014494	Fen	PTALADNQHVDLYTYLTKNSRFRSLIYDHREIRCIANNLGFNPDHVRTGLRELGYCLTHDNHGRMVWKKGGAGV*
Ga0182019_107575221	3300014498	Fen	MDRGEDKHAVDVDTYISKNSRFKSFVYDRIEILTIANNLGLKTDRVRAELRKLGYCLIMNNNGRMVWKRDGVSI*
Ga0182019_111708871	3300014498	Fen	MAQSNDQHAIGVDTYISKNSRFKSFVYDRREILTIANNLGLKTDRVRSELRRLGYCLIMNNNGRMVWKRDGVSI*
Ga0182021_106319432	3300014502	Fen	MTQSNDQHAVDVGIYISKNGRFRSFVYDRREIRTIANNLDLKTDCVRAELRKLGYCLIMNNNGRMVWKRDGVSI*
Ga0182021_109306191	3300014502	Fen	MARRNDQHAVDLDTYISKNSRFKCFVYDRREIRTIADNLGFKTDRVRTELRKLGYSLIKSSNGRMVWKRNVACI*
Ga0182021_109386062	3300014502	Fen	MDRGEDKHAVDVGKYISKNGRFKSFVYDSREIRTIANNLGLRTDLVRAELRKLGYCLIMDNNGRMVWKRDGVFI*
Ga0182021_109694442	3300014502	Fen	MAQSNDQHAIGVDTYISKNSRFKSFVYDRREIRTIANNLGLKTDRVRAELRNLGYCLIMNNNGRMVWKRDGVSI*
Ga0182021_114154001	3300014502	Fen	DVGTYISKNGRFRSFVYDNREIRTIANNLGLKTDCVRAELRKLGYSLIMNNNGRMVWKRDGVSM*
Ga0182021_126153051	3300014502	Fen	AQAMAQSNDPQAIDVNKYIIKNGRFKSFVYDSREIRIIANNLGLNTDCVRTELRKLGYCLTKNNNGRMVWKKDIVPI*
Ga0187878_12447802	3300018005	Peatland	MARRNDQHAVDLDTYISKNSRFKFFVYDRREIRTIADNLGFKTDRVRTELRKLGYCLITNNNGRMVWKRDGVSI
Ga0187878_12836251	3300018005	Peatland	DTYISKNGRFKSFVFDRREIRTIADNLGFKTDRVRTELRKLGYCLIKNNNGRMIWKRDGASIFR
Ga0187866_12663361	3300018015	Peatland	MARRKDQHAADLCTYILKNDRFKSFVYDRREIRSIANNLGFKTDRVRTELRKLGYCLITNNNGRMVWKRDQLGRTSLKIMGV
Ga0187886_12682881	3300018018	Peatland	MGIKAMPRRSHIITLGTYLLKNSRFKSFIYDRWEIRCIADNLGFTPDRVRTELRKLGYCLIRNRHGRMLWKKNVASFISLEHLIVF
Ga0179951_10542414	3300019209	Anaerobic Digestor Sludge	MQRNDLDSYILRNSRFKFFIFDRREIRTIADNLEFKTGRVRTELRKLGYRLIKNSHGQMVWKRECLLP
Ga0182022_10836641	3300019785	Fen	MARCDNQHAADLDTYISKNGRFKSFFFDRREIWSIADNLGFKTDRVRTELRKLGYCLIKNNNGRMIWKRDGVSIFR
Ga0194039_10044908	3300020163	Anoxic Zone Freshwater	MVRCNDQHAVDLVTYISKNCRFKFFVYDRREIQTIANNLGLKKDRVRTELRKLGYYLIENNNGRKVWKRDGVSI
Ga0212088_1000176523	3300022555	Freshwater Lake Hypolimnion	MAQSNDQHAIGVDTYISKNSRFKSFVYDRREILIIANNLGLKTDRVRAELRRLGYCLVMNSNGRMVWKRGGVSI
Ga0236339_12405301	3300022650	Freshwater	MTQSNDQHAVDVGTYISKNGRFRSFVYDSREIRTIANNLGLKTDCVRAELRKLGYSLIMNNNGRMVWKRDGVSI
Ga0224515_10220483	3300022830	Soil	MARRNDQHAVDLDTYISKNSRFKFFVYDRREIRTIADNLGFKTDRVRTELRKLGYSLIKNDNGRMVWRRYVACI
Ga0224520_10712542	3300023075	Soil	MAQSNDQHAVDVGTYISKNGRFRSFVYDSREIRTIANNLGLKTDCVRTELRKLGYSLIMNNNGRMVWKRDGVSI
Ga0256681_115237911	3300023311	Freshwater	QSNDQHAVDVGTYISKNGRFRSFVYDSREIRTIANNLGLKTDCVRTELRKLGYSLIMNNNGRMVWKRDGVFI
Ga0224523_11514362	3300024238	Soil	MARRNDQHAVDLDTYISKNSRFKFFVYDRREIRTIADNLGFKTDRVRTELRKLGYSLIKNDNGRMVWRRYVAC
Ga0208081_10549212	3300025443	Arctic Peat Soil	MDRGEDQHAVDVDTYISKNSRFKSFVYDRREILTIANNLGLKKDRVRAELRRLGYCLIKNNNGRMVWKRDGVSI
Ga0207931_10232062	3300025499	Arctic Peat Soil	MDQGEDQYAIDVDTYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRRLGYCLIKNNNGRMVWKRDGVSI
Ga0207931_10304302	3300025499	Arctic Peat Soil	MDRGEDQHAPDVGTYISKNSRFKSFVYDRREILIIANNLGLKTDRVRAELRRLGYCLVMNNNGRMVWKRGGVSI
Ga0208584_10072922	3300025533	Arctic Peat Soil	MAQSNDQRAIDVGTYISKNGRFRSFVYDSREIRTIANNLGLKTDYVRAELRKLGYCLIMNNNGRMVWKRDGVSI
Ga0208716_10272702	3300025548	Arctic Peat Soil	MDRGEDQHAVDVDIYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRKLGYCLIMNNNGRMVWKRDSM
Ga0209430_11123161	3300025575	Arctic Peat Soil	MDRGEDQHAVDVDIYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRRLGYCLIKNNN
Ga0209744_10951291	3300025692	Arctic Peat Soil	AKMDRGEDQHAVDVDIYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRRLGYCLIKNNNGRMVWKRDGVSI
Ga0209744_10992722	3300025692	Arctic Peat Soil	MAQSNDQHAIGVDAYISKNGRFKSFVYDSREIRTIANNLGIKTDCVRTELRKLGYCLIMNNNGRMVWKRDGVSI
Ga0209744_11047551	3300025692	Arctic Peat Soil	MDRGEDQHAVDVGTYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRKLGYCLIMNNNGRMVWKRDGVSI
Ga0209123_12497081	3300025718	Arctic Peat Soil	IGVDTYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRRLGYCLIMNNNGRMVWKRGGVSI
Ga0209745_10609961	3300025739	Arctic Peat Soil	MAQSNDQQAIGVDAYISKNGRFKSFVYDSREIRTIANNLGIKTDCVRTELRKLGYCLIMNNNGRMVWKRDGVSI
Ga0209745_10813142	3300025739	Arctic Peat Soil	MAQSNDQHAIGVDTYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRRLGYCLIMNNNGRMVWKRGGVSI
Ga0209124_101672261	3300025852	Arctic Peat Soil	MDRGEDQHAVDVGTYISKNGRFKSFVYDSREIRTIANNLGLKTDCVRAELRKLGYCLIMNNNGRMVWKRDGVSI
Ga0209124_103126122	3300025852	Arctic Peat Soil	MDRGEDKHAVDVDTYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRKLGYCLIMNNNGRMVWKRDGMSI
Ga0209585_103965371	3300025891	Arctic Peat Soil	MAQSNDQHAIDVDTYISKNSRFKSFVYDRREILTIANNLGLKTDRVRAELRRLGYCLIKNNNGRMVWKRDGVSI
Ga0209340_10087222	3300027419	Bioremediated Contaminated Groundwater	MARRKNQHAVDVNAYISDNSRFKFFVYDLREIRTIADNLGFKPDHVRTELRKLGYCLIKNSNGRMIWKRDRVCTI
Ga0209800_103040432	3300027800	Freshwater	MARCNDQHALDVDTYISKNSRFKSFVYDRREILTISNNLGLKTDRVRTELRKLGYCLIENNNGRKVWKRYGVSI
Ga0208980_100304725	3300027887	Wetland	LARRNDQHAVDLDTYISKNSRFKSFVYDRREIRTIADNLGLKADRVRAELRKLGYCLVENNNGRMVWKRDAACK
Ga0208980_103855082	3300027887	Wetland	MARCNDQHIADLKTYLSENSRFKFFISDHREIRTIADNLGFKTDRVRNELRKEGYCLIKNNNGRMVWRRDVACNDGEA
Ga0209496_105450521	3300027890	Wetland	LIDITTYISKNRRFKSFVYDRREVRNIADNLGCKTDHVRSELKNLGYSLIKNSNGQMVWKKKSVMA
Ga0209777_1000122426	3300027896	Freshwater Lake Sediment	MVRCNDQHAVDLVTYISKNCRFKFFVYDRREIQTIANNLGLKKDRVRTELRKLGYYLIENNNGRKVWKRDGVST
Ga0209777_100057645	3300027896	Freshwater Lake Sediment	MARRKDQRVDICTYILKNYRFKSFAYDRREILTIANNLGFKTDHVRTELRRLSYCLIKNNNGRMVWKRDQLGRTSLKIMGV
Ga0209777_100302573	3300027896	Freshwater Lake Sediment	MTRRNYQHAVDLDTYISKNGRFRSFVYDRREIQTIADNLGFRTDRVRIELRKLGYSLIKNNNGRMVWRRDGMSI
Ga0209777_100494826	3300027896	Freshwater Lake Sediment	MAQSNDQHAIGVDTYISKNSRFKSFVYDRREILIMANNLGLKTDRVRAELRRLGYCLVMNNNGRMVRKRSGVSI
Ga0209777_100966211	3300027896	Freshwater Lake Sediment	MARHNDLHAIDLDTYISKNSRFKFFVNDRREIRTIADNLGFKTDRVRTELRKLGYCLITNNNGRMVWKRDGVSM
Ga0209777_101115832	3300027896	Freshwater Lake Sediment	MTRRNDQHVVDLKTYLSKNSRFKFFVYDRREIRTIADNLGFKTDRVRTELRKLGYCLITNNNGRMVWKRDQLGRTSLKIMGV
Ga0209777_101458742	3300027896	Freshwater Lake Sediment	MARRNDQHAVNLDTYISKNSRFKFFVYDSREIRTIADNLGFKTDRVRTELRKLGYCLIKSNNGRMVWKRDVVWI
Ga0209777_102193662	3300027896	Freshwater Lake Sediment	MAQRNDQHAVDLDTYILKNSRFKFLVYDSREIRTIADNLGLKTDRVRTELRKLGYCLIKSNNGRMVWKRDVAYI
Ga0311334_110547861	3300029987	Fen	MTQSNDQHAVDVGIYISKNGRFRSFVYDSREIRTIANNLGLKTDCVRTELRKLGYCLIMNNNGRMVWKRAGVSI
Ga0311337_117011731	3300030000	Fen	MDRGEDQHAVDVSTYISKNGRFKSFVYDSREIRTIANNLGLKTDCVRTELRKLGYCLIMNNNG
Ga0302323_1026860981	3300031232	Fen	MDRGEDQHAVDVGTYISKNGRFKSFVYDSREIRTIANNLGLKTDCVRAELRKLGYCLIMNNNGRM
Ga0307375_101552951	3300031669	Soil	MTQSNDQHAVDVDTYISKNSRFKSFVYDRGEIRTIAENLGFKTDHVRTELRKLGYSLIKNSSHGRMIWKRDQLERTSLTIAGI
Ga0315291_103560471	3300031707	Sediment	MARRKDQHAVDLDTYISKNSRFKSFVYDRREIRTISDNLGFKTDRVRTELRKLGYCLIKNNNGRMVWKRDGVCI
Ga0302321_1031131502	3300031726	Fen	MTQSNDQHAVDVGTYISKNGRFRSFVYDSREIRTIANNLGLKTDCVRAELRKLGYCLIMNNNGRMVWKRD
Ga0315293_100072668	3300031746	Sediment	MARRKDLHAVDLDTYISKNSRFKSFVYDRREIRTIADNLGFKTDRVRTELRKLGYCLIKNNNGRMVWKRDGVCI
Ga0315288_106732042	3300031772	Sediment	MARRDDQHAPDLDIYLSRNDRFKASVYDHREVRCIADILGFAPDRVRSELRKLGYCLTKNTHGRMIWKRDGTSI
Ga0315285_100405033	3300031885	Sediment	MARRNDKHATDLDIYLSRNDRFKASVYDRREIRCIADTLGFAPDRVRSELRKLGYCLAKNTHGRMIWKRDGTST
Ga0302322_1010445612	3300031902	Fen	MAQSNDQHAVDVGTYISKNGRFRSFVYDSREIRTIANNLGLKTDCVRTELRKLGYCLIMNNNGRMVWKRAGVSI
Ga0311367_121188693	3300031918	Fen	SNDQHAVDVGTYISKNGRFRSFVYDSREIRTIANNLGLKTDCVRAELRKLGYCLIMNNNGRMVWKRDGVSI
Ga0315278_106958252	3300031997	Sediment	MVLGDDQRAADLDAYLSKNSRFRSFVYDRREIRCIADNLEFNPDHVRTGLRKLGYRLIQNNHGRMVWKRGRASA
Ga0315278_107206771	3300031997	Sediment	LARRNDQHAVDLDTYISKNGRFKSFVYDRREIRTIADNLGLKADRVRAELRKLGYCLVENNNGRMVWKRDAACK
Ga0315284_117102722	3300032053	Sediment	MARRDDQHAPDLDIYLSRNDRFKASVYDHREVRCIADILGFAPDRVRSELRKLGYCLTKNTHGRMIWKRDG
Ga0315282_100552713	3300032069	Sediment	MDQFDDQYATDLDTYLLKNSRFKSFIYNRQEIWSIADNLGFAPDRVRTGLRKLGYCLIKNSHGRMVWKRGGASI
Ga0315292_102965842	3300032143	Sediment	MARCNDQHAVDLDTYISKNGRFKFFVYDRREIQTIANNLGLKTDLVRTELKKMGYYLIKTNNGQMVWKRDGVSI
Ga0315295_105411561	3300032156	Sediment	MQAMARRNDPHIVDLKTYLSKNSRFKFFVFDRREIRTIADNLGFKTDRVRTELKKLGYCLIKNNNGRMIWKRDVV
Ga0315295_119185081	3300032156	Sediment	MARCNDQHAVDLDTYISKNSRFKFLVYDRREIQTIANNLGLKTDLVRTELKKLGYNLIKTNNGQMVLKRDGVSI
Ga0315283_103734302	3300032164	Sediment	MARCNDQHAVDLDTYISKNSRFKFLVYDRREIQTIANNLGLKTDLVRTELKKLGYNLIKTNNGQMVWKRDGVSI
Ga0315275_101243882	3300032401	Sediment	MARRDDQHATDLDIYISRNDRFKAFVYDRREIRCIADNLGFAPDRVRSELRKLGYCLTKNTHGRMIWKRDGTSI
Ga0315275_112257091	3300032401	Sediment	LARRNDQHAVDLDTYISKNSRFKSVVYDRREIRTIADNLGLKADRVRAELRKLGYCLVENNNGRMVWKRDAACK
Ga0315275_118852691	3300032401	Sediment	MARCNDQHALDVDTYISKNSRFKSFVYDRREIQTIANKLGLKTDRVRTELRKLGYYLIENNNGRMVWKREGISI
Ga0335070_106867072	3300032829	Soil	MAKRNNQHSVDLNTYLLKNSRFKFFVYDRREIQTIADNLGFKNDKVRSELRKLGYCLTKNNNGLMVWKKGEAFI
Ga0335081_101206643	3300032892	Soil	MVRRNCQHSENLDKYISRNSRFKFFVYDCREIRTIADNLGIKTDRVRTELKKLGYHLSKNDNGRLVWKREVVCV
Ga0335081_122521251	3300032892	Soil	MARRNNQHSLDLNTYLSKNDRFKFFVYDRREIRTIADNLGFKTDRVRTELRKLGYYLIKNNNGLMVWKRDAACI
Ga0316601_1002232551	3300033419	Soil	YLSKNKRFKSFVYDRREIRNIADNLGCKTDHVRTELRKLGYSLIKNSHGQMVWKKDQLKHPLTVAGI
Ga0316630_108954371	3300033487	Soil	MARRKEQHAADLDTYISKNSRFKSFVYDSREIRTIADNLGVKTDRVSTELRKLGYCLINNNNGRMVWKRDVACI
Ga0299912_113135121	3300033489	Soil	NDQHAVDVDTYISKNSRFKSFVYDHREIRTIADNLGFKTDRVRTELRKLGYCLIENNNGRMVWKRDGVSI
Ga0316617_1000271155	3300033557	Soil	MALGDDQHAADLDTYLLKNLRFRSLVYDHREIRCIADNLGFNPDHVRTGLRKLGYCLIQNNHGRMVWKRDAACI
Ga0334844_112900_297_521	3300033743	Soil	MAQSNDLHAVDVGTYISKNGRFRSFVYDSREIRTIANNLGLKTDCVRTELRKLGYSLIMNNNGRMVWKRDGVSI
Ga0334811_109681_313_537	3300033891	Soil	MDRGEDKHAVDVDTYISKNSRFKSFVYDRIEILTIANNLGLKTDRVRAELRKLGYCLIMNNNGRMVWKRDGVSI
Ga0370490_0242087_358_582	3300034128	Untreated Peat Soil	MAQRNDQHAVDVDTYISKNSRFKSFVYDRREILTIANNLGFKTDRVRTELRKLGYCLIENNNGRMVWKRDGVSI
Ga0370501_0099230_633_857	3300034195	Untreated Peat Soil	MAQSNDQHAIGVDAYISKNCRFKSFVYDSREIRTIANNLGLKTDCVRTELRKLGYCLIMNNNGRMVWKRDGVSI
Ga0370481_0029682_117_341	3300034281	Untreated Peat Soil	MAQSNDQNAVDVGTYISKNGRFRSFVYDSREIRTIANNLGLKTDCVRAELRKLGYSLIMNNNGRMVWKRDGVSI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059489

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences