Metagenome / Metatranscriptome Family F054979

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054979
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	81 residues
Representative Sequence	MQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLEWIKQNVLSLQEQFLLLKKLYGPTWILA
Number of Associated Samples	86
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.54 %
% of genes near scaffold ends (potentially truncated)	33.09 %
% of genes from short scaffolds (< 2000 bps)	85.61 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.360 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (21.583 % of family members)
Environment Ontology (ENVO)	Unclassified (33.813 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (25.180 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.06% β-sheet: 0.00% Coil/Unstructured: 36.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
a.69.2.1: Ypt/Rab-GAP domain of gyp1p	d2g77a1	2g77	0.61644
a.128.1.0: automated matches	d4wk5a1	4wk5	0.61171
c.3.1.2: FAD-linked reductases, N-terminal domain	d3c96a1	3c96	0.60983
c.3.1.2: FAD-linked reductases, N-terminal domain	d1d7la1	1d7l	0.60973
a.75.1.1: Ribosomal protein S7	d1iqva_	1iqv	0.60846

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF14489	QueF	9.35
PF00994	MoCF_biosynth	7.91
PF07238	PilZ	4.32
PF00589	Phage_integrase	4.32
PF05970	PIF1	3.60
PF01986	DUF123	3.60
PF01261	AP_endonuc_2	2.88
PF11225	DUF3024	2.88
PF00027	cNMP_binding	2.16
PF01323	DSBA	2.16
PF00565	SNase	1.44
PF10387	DUF2442	1.44
PF00701	DHDPS	1.44
PF04055	Radical_SAM	1.44
PF08032	SpoU_sub_bind	0.72
PF00072	Response_reg	0.72
PF01541	GIY-YIG	0.72
PF02592	Vut_1	0.72
PF13515	FUSC_2	0.72
PF01471	PG_binding_1	0.72
PF03706	LPG_synthase_TM	0.72
PF12762	DDE_Tnp_IS1595	0.72
PF01613	Flavin_Reduct	0.72
PF00484	Pro_CA	0.72
PF01553	Acyltransferase	0.72
PF00881	Nitroreductase	0.72
PF00216	Bac_DNA_binding	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0507	ATPase/5Ã¢â‚¬â„¢-3Ã¢â‚¬â„¢ helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	3.60
COG1833	Uri superfamily endonuclease	General function prediction only [R]	3.60
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	2.88
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.72
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.72
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.72
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.72
COG1738	Queuosine precursor transporter YhhQ, DUF165 family	Translation, ribosomal structure and biogenesis [J]	0.72
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.36 %
Unclassified	root	N/A	49.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.36 %
Unclassified	root	N/A	49.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.36 %
Unclassified	root	N/A	49.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.37 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.44 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	26.62 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.44 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.44 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	25.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.44 %
Spirochaetales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	0.72 %
Acidiferrobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales	0.72 %
Epsilonproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	4.32 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	4.32 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	4.32 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.44 %
Spirochaetaceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae	0.72 %
Acidiferrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae	0.72 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.72 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	4.32 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.32 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	4.32 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.44 %
Alkalispirochaeta	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta	0.72 %
Sulfurovaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae	0.72 %
Acidiferrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter	0.72 %
Desulfohalobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfohalobiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
unclassified Geobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae	4.32 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.32 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	2.16 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.44 %
Alkalispirochaeta odontotermitis	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	0.72 %
Desulfovermiculus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfohalobiaceae → Desulfovermiculus	0.72 %
Sulfurovum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae → Sulfurovum	0.72 %
Desulfosarcina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina	0.72 %
Acidiferrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Geobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	4.32 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.32 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	2.16 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.44 %
unclassified Sulfurovum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae → Sulfurovum → unclassified Sulfurovum	0.72 %
unclassified Desulfovermiculus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfohalobiaceae → Desulfovermiculus → unclassified Desulfovermiculus	0.72 %
Alkalispirochaeta odontotermitis	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	0.72 %
Desulfosarcina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina	0.72 %
Acidiferrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Geobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	4.32 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.32 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	2.16 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.44 %
Desulfovermiculus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfohalobiaceae → Desulfovermiculus → unclassified Desulfovermiculus → Desulfovermiculus sp.	0.72 %
Sulfurovum sp. NBC37-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae → Sulfurovum → unclassified Sulfurovum → Sulfurovum sp. NBC37-1	0.72 %
Alkalispirochaeta odontotermitis	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	0.72 %
Desulfosarcina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina	0.72 %
Acidiferrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000316\|WSSedB2CaDRAFT_1016951	Not Available	642	Open in IMG/M
3300001213\|JGIcombinedJ13530_103798688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	825	Open in IMG/M
3300001213\|JGIcombinedJ13530_103913127	Not Available	562	Open in IMG/M
3300001213\|JGIcombinedJ13530_106495688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1132	Open in IMG/M
3300002961\|JGI11641J44799_10016985	All Organisms → cellular organisms → Bacteria	2181	Open in IMG/M
3300003154\|Ga0052186_10136007	Not Available	764	Open in IMG/M
3300003154\|Ga0052186_10213337	Not Available	567	Open in IMG/M
3300003432\|JGI20214J51088_10006613	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7647	Open in IMG/M
3300003432\|JGI20214J51088_10346860	Not Available	1004	Open in IMG/M
3300003432\|JGI20214J51088_10379150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	948	Open in IMG/M
3300003432\|JGI20214J51088_10409811	Not Available	902	Open in IMG/M
3300003432\|JGI20214J51088_10608673	Not Available	692	Open in IMG/M
3300003473\|FeGluAir_10205680	Not Available	721	Open in IMG/M
3300003541\|JGI20214J51650_10031790	All Organisms → cellular organisms → Bacteria → Proteobacteria	3454	Open in IMG/M
3300003541\|JGI20214J51650_10420568	Not Available	933	Open in IMG/M
3300003541\|JGI20214J51650_10494785	Not Available	857	Open in IMG/M
3300003541\|JGI20214J51650_11195393	Not Available	528	Open in IMG/M
3300004000\|Ga0055458_10282217	Not Available	521	Open in IMG/M
3300004048\|Ga0055494_10075241	Not Available	694	Open in IMG/M
3300004051\|Ga0055492_10060814	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	777	Open in IMG/M
3300004051\|Ga0055492_10080471	Not Available	702	Open in IMG/M
3300004057\|Ga0055496_10193791	Not Available	528	Open in IMG/M
3300004066\|Ga0055484_10084093	Not Available	761	Open in IMG/M
3300004071\|Ga0055486_10022358	Not Available	1092	Open in IMG/M
3300004146\|Ga0055495_10088818	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	713	Open in IMG/M
3300004155\|Ga0066600_10004067	All Organisms → cellular organisms → Bacteria → Proteobacteria	4328	Open in IMG/M
3300004155\|Ga0066600_10227889	Not Available	817	Open in IMG/M
3300004155\|Ga0066600_10657722	Not Available	528	Open in IMG/M
3300004155\|Ga0066600_10690081	Not Available	517	Open in IMG/M
3300004242\|Ga0066601_10168036	Not Available	823	Open in IMG/M
3300005213\|Ga0068998_10013590	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300005830\|Ga0074473_10887873	All Organisms → cellular organisms → Bacteria → Proteobacteria	3590	Open in IMG/M
3300005831\|Ga0074471_10904223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	849	Open in IMG/M
3300006224\|Ga0079037_100141118	All Organisms → cellular organisms → Bacteria	2095	Open in IMG/M
3300009009\|Ga0105105_10464777	Not Available	717	Open in IMG/M
3300009009\|Ga0105105_11075137	Not Available	504	Open in IMG/M
3300009009\|Ga0105105_11090288	Not Available	501	Open in IMG/M
3300009037\|Ga0105093_10077853	Not Available	1560	Open in IMG/M
3300009037\|Ga0105093_10457427	Not Available	705	Open in IMG/M
3300009075\|Ga0105090_10155833	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1424	Open in IMG/M
3300009075\|Ga0105090_10160344	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1401	Open in IMG/M
3300009075\|Ga0105090_10227958	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300009081\|Ga0105098_10108152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1208	Open in IMG/M
3300009081\|Ga0105098_10816238	Not Available	505	Open in IMG/M
3300009082\|Ga0105099_10628321	Not Available	661	Open in IMG/M
3300009091\|Ga0102851_12959917	Not Available	545	Open in IMG/M
3300009131\|Ga0115027_10040684	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2299	Open in IMG/M
3300009131\|Ga0115027_10061047	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1995	Open in IMG/M
3300009131\|Ga0115027_10281746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1108	Open in IMG/M
3300009131\|Ga0115027_11893985	Not Available	502	Open in IMG/M
3300009157\|Ga0105092_10397110	Not Available	784	Open in IMG/M
3300009165\|Ga0105102_10869764	Not Available	518	Open in IMG/M
3300009167\|Ga0113563_10221977	All Organisms → cellular organisms → Bacteria → Proteobacteria	1898	Open in IMG/M
3300009167\|Ga0113563_10705080	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1132	Open in IMG/M
3300009167\|Ga0113563_10715587	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300009170\|Ga0105096_10090511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1522	Open in IMG/M
3300009170\|Ga0105096_10181626	Not Available	1062	Open in IMG/M
3300009179\|Ga0115028_10000112	All Organisms → cellular organisms → Bacteria	10931	Open in IMG/M
3300009179\|Ga0115028_10001462	All Organisms → cellular organisms → Bacteria → Proteobacteria	6005	Open in IMG/M
3300009179\|Ga0115028_10913308	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	696	Open in IMG/M
3300009179\|Ga0115028_11514588	Not Available	570	Open in IMG/M
3300009179\|Ga0115028_12020693	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	509	Open in IMG/M
3300011340\|Ga0151652_11109789	Not Available	517	Open in IMG/M
3300014260\|Ga0075307_1023309	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300014261\|Ga0075360_1063811	Not Available	655	Open in IMG/M
3300014264\|Ga0075308_1136655	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	554	Open in IMG/M
3300014266\|Ga0075359_1122138	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	556	Open in IMG/M
3300014304\|Ga0075340_1004614	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300014305\|Ga0075349_1163561	Not Available	528	Open in IMG/M
3300014306\|Ga0075346_1002244	All Organisms → cellular organisms → Bacteria	2684	Open in IMG/M
3300014313\|Ga0075347_1086085	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina	694	Open in IMG/M
3300014315\|Ga0075350_1127195	Not Available	625	Open in IMG/M
3300014321\|Ga0075353_1216995	Not Available	519	Open in IMG/M
3300014322\|Ga0075355_1135517	Not Available	642	Open in IMG/M
3300017944\|Ga0187786_10496861	Not Available	552	Open in IMG/M
3300017966\|Ga0187776_10181830	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1312	Open in IMG/M
3300021332\|Ga0210339_1216541	Not Available	544	Open in IMG/M
3300021332\|Ga0210339_1538595	Not Available	627	Open in IMG/M
3300025948\|Ga0210088_1000499	All Organisms → cellular organisms → Bacteria	7411	Open in IMG/M
3300025950\|Ga0210134_1020054	Not Available	933	Open in IMG/M
3300025956\|Ga0210104_1033260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300025966\|Ga0210105_1001983	All Organisms → cellular organisms → Bacteria	3104	Open in IMG/M
3300026026\|Ga0210129_1073000	Not Available	669	Open in IMG/M
3300026069\|Ga0208539_1015980	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	721	Open in IMG/M
3300026353\|Ga0256818_1029457	Not Available	546	Open in IMG/M
3300026372\|Ga0256804_1020450	Not Available	639	Open in IMG/M
3300026476\|Ga0256808_1001393	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300026492\|Ga0256802_1016750	Not Available	869	Open in IMG/M
3300026501\|Ga0256806_1063026	Not Available	681	Open in IMG/M
3300027715\|Ga0208665_10008727	All Organisms → cellular organisms → Bacteria	2422	Open in IMG/M
3300027715\|Ga0208665_10047809	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300027715\|Ga0208665_10070808	Not Available	1045	Open in IMG/M
3300027739\|Ga0209575_10205518	Not Available	697	Open in IMG/M
3300027739\|Ga0209575_10333228	Not Available	519	Open in IMG/M
3300027841\|Ga0209262_10023372	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2646	Open in IMG/M
3300027841\|Ga0209262_10134076	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300027871\|Ga0209397_10004192	All Organisms → cellular organisms → Bacteria	3209	Open in IMG/M
3300027871\|Ga0209397_10037595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1706	Open in IMG/M
3300027871\|Ga0209397_10053953	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1513	Open in IMG/M
3300027871\|Ga0209397_10538789	Not Available	582	Open in IMG/M
3300027877\|Ga0209293_10002926	All Organisms → cellular organisms → Bacteria	4502	Open in IMG/M
3300027885\|Ga0209450_10033060	All Organisms → cellular organisms → Bacteria	3058	Open in IMG/M
3300027887\|Ga0208980_10107509	Not Available	1636	Open in IMG/M
3300027887\|Ga0208980_10301784	Not Available	928	Open in IMG/M
3300027890\|Ga0209496_10440787	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	683	Open in IMG/M
3300027897\|Ga0209254_10424618	Not Available	979	Open in IMG/M
3300032829\|Ga0335070_10750794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter	910	Open in IMG/M
3300032829\|Ga0335070_11431896	Not Available	630	Open in IMG/M
3300032897\|Ga0335071_10440070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1256	Open in IMG/M
3300033004\|Ga0335084_10027652	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	5793	Open in IMG/M
3300033004\|Ga0335084_10686825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1044	Open in IMG/M
3300033406\|Ga0316604_10124616	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1366	Open in IMG/M
3300033413\|Ga0316603_10204457	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1683	Open in IMG/M
3300033413\|Ga0316603_10500120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1116	Open in IMG/M
3300033413\|Ga0316603_11175755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfohalobiaceae → Desulfovermiculus → unclassified Desulfovermiculus → Desulfovermiculus sp.	726	Open in IMG/M
3300033414\|Ga0316619_10265426	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300033416\|Ga0316622_100329736	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1689	Open in IMG/M
3300033418\|Ga0316625_102037419	Not Available	566	Open in IMG/M
3300033418\|Ga0316625_102434606	Not Available	527	Open in IMG/M
3300033419\|Ga0316601_100363206	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300033434\|Ga0316613_10968029	Not Available	585	Open in IMG/M
3300033482\|Ga0316627_100380812	All Organisms → cellular organisms → Bacteria → Proteobacteria	1201	Open in IMG/M
3300033482\|Ga0316627_102019869	Not Available	599	Open in IMG/M
3300033482\|Ga0316627_102863452	Not Available	513	Open in IMG/M
3300033483\|Ga0316629_10250552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1163	Open in IMG/M
3300033483\|Ga0316629_10522731	Not Available	867	Open in IMG/M
3300033486\|Ga0316624_10279172	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1343	Open in IMG/M
3300033488\|Ga0316621_10469809	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	873	Open in IMG/M
3300033488\|Ga0316621_10898830	Not Available	654	Open in IMG/M
3300033493\|Ga0316631_10368139	Not Available	588	Open in IMG/M
3300033521\|Ga0316616_100455131	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300033521\|Ga0316616_102467673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae → Sulfurovum → unclassified Sulfurovum → Sulfurovum sp. NBC37-1	697	Open in IMG/M
3300033557\|Ga0316617_100187331	Not Available	1627	Open in IMG/M
3300033557\|Ga0316617_101111555	Not Available	780	Open in IMG/M
3300033557\|Ga0316617_101355767	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300033557\|Ga0316617_102208786	Not Available	568	Open in IMG/M
3300034169\|Ga0370480_0000488	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	16986	Open in IMG/M
3300034169\|Ga0370480_0056114	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1369	Open in IMG/M
3300034653\|Ga0316599_137843	Not Available	645	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.56%
Engineered	Engineered	1.44%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	61.87%
Terrestrial	Environmental → Terrestrial	36.69%
Bioreactor	Engineered → Bioreactor	1.44%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	37.41%
Soil	Environmental → Terrestrial → Soil	34.53%
Marine	Environmental → Aquatic → Marine	23.02%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.16%
Sediment	Environmental → Aquatic → Sediment	1.44%
Unclassified	Engineered → Bioreactor → Unclassified	1.44%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	33.81%
Sediment	Environmental → Aquatic → Freshwater → Sediment	21.58%
Wetlands	Environmental → Aquatic → Marine → Wetlands	21.58%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.91%
Pond	Environmental → Aquatic → Freshwater → Pond	6.47%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.16%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.44%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.44%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	1.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	33.81%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	21.58%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	11.51%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	10.07%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	6.47%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.32%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.60%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.16%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.44%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.44%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	1.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	21.58%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	11.51%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	10.79%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	10.79%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	10.07%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	8.63%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	6.47%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	3.60%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.16%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.16%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.44%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.44%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.44%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.44%
Bioreactor	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Bioreactor	1.44%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	0.72%
Wetland Sediment	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Wetland Sediment	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000316	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface Sediment Feb2011 Site B2 Cattail	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003154	Anode biofilm microbial communities from J. Craig Venter Institute, USA, in microbial fuel cells	Engineered	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003473	Fe-reducing enrichment culture from wetland. Sample 3 with anaerobic and aerobic cycling.	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004000	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2	Environmental	Open in IMG/M
3300004048	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2	Environmental	Open in IMG/M
3300004051	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2	Environmental	Open in IMG/M
3300004057	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2	Environmental	Open in IMG/M
3300004066	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2	Environmental	Open in IMG/M
3300004071	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2	Environmental	Open in IMG/M
3300004146	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004242	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300014260	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014261	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D1	Environmental	Open in IMG/M
3300014264	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2_rd	Environmental	Open in IMG/M
3300014266	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D1	Environmental	Open in IMG/M
3300014304	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1	Environmental	Open in IMG/M
3300014305	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D1	Environmental	Open in IMG/M
3300014306	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1	Environmental	Open in IMG/M
3300014313	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1	Environmental	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300021332	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.384 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025948	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025950	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025956	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025966	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026026	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026069	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026353	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PR4	Environmental	Open in IMG/M
3300026372	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 F5	Environmental	Open in IMG/M
3300026476	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR6	Environmental	Open in IMG/M
3300026492	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 CS5	Environmental	Open in IMG/M
3300026501	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR4	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027739	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M
3300034653	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_03R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedB2CaDRAFT_10169511	3300000316	Wetland	VIESAAEKFGVPDEVLDLIGRDFISQMVEDFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV*
JGIcombinedJ13530_1037986882	3300001213	Wetland	MECSLESAAKKFGVPPEVLDLIGRQFISKIIEDFPCLLLPPIMDTLKHGYVRNGLEWVKENVASLQREFLEMKRLYGPTWILA*
JGIcombinedJ13530_1039131271	3300001213	Wetland	MECSLESAAKQFGVPPEVLDLIDRQFISKIIEDFPCLLLPPIMQTLKNEYVRNGLQWIKQNVESLKRQFLQLKQLYSPTWIL
JGIcombinedJ13530_1064956882	3300001213	Wetland	MIVESAAEKFGVPNEVLDLIGRDFISQMIEEFPSLLLPPIMSTLKREYVRNGLEWMRQNVLPLQKHFLVLKRMYGV*
JGI11641J44799_100169853	3300002961	Wetland	MQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVKHGVEWIKQNAMSLREQFLLLKKLYGPAWILA*
Ga0052186_101360071	3300003154	Bioreactor	MKAMLEAAARRFAVPSEVLDLIGQNWISQVIDEFPSLLLPPIMQTLHREYVEHGLDWIRQNVRSLQDQFLLLKKLYGPTWILA*
Ga0052186_102133371	3300003154	Bioreactor	MKNLIEAAAEKFGVPSEVLDLLDRNWISEVIEEFPSLLLPPIMQTLHQEYVKNGMEWVSQNITELRNRIQLLQKLYGPTWILA*
JGI20214J51088_100066133	3300003432	Wetland	MVIESAAEKFGVPDEVLDLIGRDFISQMVEDFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV*
JGI20214J51088_103468601	3300003432	Wetland	MDCSLQSAAEKFGIPATVLDVIDRQFISHVIEEYPCLLLPPIMETLKHEYMRNGLGWIKENVASLQKQFLLLKQLYGPTWILV*
JGI20214J51088_103791502	3300003432	Wetland	MKNLIEAAAEKFGVPSEVLDLLDRNWIAQMIEEFPSLLLPPIMQTLHQEYVKNGMEWVSQHITELRNRIQLLQKLYGPTWILA*
JGI20214J51088_104098112	3300003432	Wetland	MENLLESAAKRFGVPPDILDLIGRDFITSVIDEFPSLMLPPIMSTLKQEYLKNGLEWTKQSIVYLREQFLLMKRLYGPNWILA*
JGI20214J51088_106086731	3300003432	Wetland	MKNLIEAAAEKFGVPSEVLDLLDRNWIAQMIEEFPSLLLPPIMQTLHQEYVKNGMEWVSQHITELRNR
FeGluAir_102056801	3300003473	Wetland Sediment	MVIESAAEKFGVPGEVLDLIGRDFISQMVEEFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV*
JGI20214J51650_100317902	3300003541	Wetland	MKNLIEAAAEKFGVPSEVLDLLGRNWISEVIEEFPSLLLPPIMQTLHQEYVKNGMEWVSQNITELRNRIQLLQKLYGPTWILA*
JGI20214J51650_104205681	3300003541	Wetland	MVIESAAEKFGVPGEVLDLIGREFIRQMIEDFPSLLLPPIMSTLRQEYVRNGLEWMRQNVLPLQKHFLVLKHMY
JGI20214J51650_104947851	3300003541	Wetland	MGIESAAEKFGVPGEVLDLIGRDFISQMVEEFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV*
JGI20214J51650_111953931	3300003541	Wetland	MECSLQSAAEKFGIPATVLDVIDRQFISHVIEEYPCLLLPPIMETLKHEYMRNGLGWIKENVASLQKQFLLLKQLYGPTWILV*
Ga0055458_102822171	3300004000	Natural And Restored Wetlands	MQNLLELSAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVENGMEWIKQNVMSLREQFLLLKKLYGPSWILA*
Ga0055494_100752411	3300004048	Natural And Restored Wetlands	MKVMLETAAKKFGVPSEVLDLIDHNWISQLIDEFPDLLLPPIMQTLHREYVKNGFDWVKQNVGTLQNQFLLLKKLYGPTWILV*
Ga0055492_100608141	3300004051	Natural And Restored Wetlands	MKVMLENAAKKFGVPSEVLDLIDHNWISQLIDEFPDLLLPPIMQTLHREYVKNGFDWVKQNVGTLQNQFLLLKKLYGPTWILV*
Ga0055492_100804711	3300004051	Natural And Restored Wetlands	MESLIESTAKKFGVPTEVLDLIDRQFISKVIDEFPDLLLPPIMNTLKQEYLKNGLGWIKQNVISLQEQFLLLKRLYGSTWILA*
Ga0055496_101937911	3300004057	Natural And Restored Wetlands	MKVMLETAAKKFGVPSEVLDLIDQNWISQLIDEFPDLLLPPIMQTLHREYVKNGFDWVKQNVGTLQNQFLLLKKLYGPTWILV*
Ga0055484_100840931	3300004066	Natural And Restored Wetlands	MENLIESTARKFGVPTEVLDLIDRQFISTVIDEFPDLLLPPIMNTLKQEYLKNGLGWIKQNVISLQEQFLLLKRLYGSTWILA*
Ga0055486_100223581	3300004071	Natural And Restored Wetlands	MQNLLELSAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVENGLEWIKQNVMSLREQFL
Ga0055495_100888182	3300004146	Natural And Restored Wetlands	EVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVENGLEWIKQNVMSLREQFLLLKKLYGPSWILA*
Ga0066600_100040673	3300004155	Freshwater	MVIESAAEKFGVPGEVLDLIGRDFISQMVEDFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV*
Ga0066600_102278892	3300004155	Freshwater	MESLMESAATKAGVPSQVLDLLDRNWISQLVDEFPSLLLPPIMETLHREYVRHGLEWMKQNVDSLKKQFLLMKQLYGPTWILA*
Ga0066600_106577221	3300004155	Freshwater	MESISESAATKAGVPSQVLDLLDSNWISQLVDEFPSLLLPPIMETLHREYVRHGLEGMKQNVDSLKKQFLFMKQLYGPTWILA*
Ga0066600_106900811	3300004155	Freshwater	MENLLESAAKRFGVPPDVLDLIGRDFIAEVIDEFPSLLLPPIMSTLKQEYLKNGLEWTKQNILSLREQFLLLKRLYGPTWILA*
Ga0066601_101680361	3300004242	Freshwater	MESLMESAATKAGVPSRVLDLLDRNWISQLVDEFPSLLLPPIMETLHREYVRHGLEWMKQNVDSLKKQFLLMKQLYGPTWILA*
Ga0068998_100135902	3300005213	Natural And Restored Wetlands	MQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLDWIKQNVLSLQEQFLLLKKLYGPTWILA*
Ga0074473_108878732	3300005830	Sediment (Intertidal)	MQNLLELSAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVENGLEWIKQNVMSLREQFLLLKKLYGPSWILA*
Ga0074471_109042231	3300005831	Sediment (Intertidal)	VPSEVLDLIDHNWISQLIDEFPDLLLPPIMQTLHREYVKNGFDWVKQNVGTLQNQFLLLKKLYGPTWILV*
Ga0079037_1001411182	3300006224	Freshwater Wetlands	MLNLLESAAKKFGVPSEVLDLIGRPFISQIIDEFPTLLLPPIMNTLKQEYMKNGLEWIKQNAMSLREQFLLLKKLYGPAWILA*
Ga0105105_104647772	3300009009	Freshwater Sediment	MKAMLEAAARRFAVPSEVLDLIGRNWLSQVIDEFPGLLLPPIMETLHREYLNHGIDWIRQNVKSLQDQFLLLKKLYSQRCYRNVLILAV*
Ga0105105_110751371	3300009009	Freshwater Sediment	MESLLESAATKAGVPSQVLDLLDRSWISQLVDELPSLLLPPIMETLHREYVRHGLEWMMQNVDSLKKQFLLMKQLYGPTWILA*
Ga0105105_110902881	3300009009	Freshwater Sediment	MVIESAAEKFGVPDEVLDLIGRDFISQMVEEFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV*
Ga0105093_100778531	3300009037	Freshwater Sediment	MKAMIKAAAKKFGVPSEVLDLIGRNWLSQVIDEFPGLLLPPIMQTLHREYLNHGIDWIRQNVKSLQEQFLLLKKLYGPTWILA*
Ga0105093_104574272	3300009037	Freshwater Sediment	MKSMLEAAARKFGVPSEVLDLIGRKFISQVIADFPGLLLPPIMQTLHREYVEHGLEWVKENVKSLQDQFLLLKKLYGPTWILA*
Ga0105090_101558331	3300009075	Freshwater Sediment	MKAMLEAAARQFRVPSEVLDLIDRNWISQVIEEFPGLLLPPIMQTLHREYVKNGLEWVRQNVASLRNQLLLLQKLYGPTWILA*
Ga0105090_101603441	3300009075	Freshwater Sediment	LGALPNGNIIIRISSNPLRGAPTKSLIEAAAKRFGVPSEVLDLIDRAWISQVIEEFPSLLLPPIMETLHQDYVKNGLEWVSQHVTELRNQLQLLQKLYGPTWILA*
Ga0105090_102279582	3300009075	Freshwater Sediment	MESILESAATKAGVPSQVLDLLDSNWISQLVDEFPSLLLPPIMETLHREYVRHGLEGMKQNVDSLKKQFLFMKQLYGPTWILA*
Ga0105098_101081522	3300009081	Freshwater Sediment	MVIESAAEKFGVPGEVLDLIGRDFISQMVEDFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYWV*
Ga0105098_108162381	3300009081	Freshwater Sediment	LQVQKSWSNYRNKDGGAPMKNLIEAAAEKFAVPSEVLDLLDRNWISEVIEEFPSLLLPPIMQTLHGEYMKNGLEWIRQNSAPLKSQLLLLRRFYGPPWLLA*
Ga0105099_106283212	3300009082	Freshwater Sediment	VRYNTLTLCKSRRSIVENTLESVAKRFGVPDSVLDLIGREFITEVIDEFPSLMLPPIMSTLKQEYLKHGLEWTKQGIQSLREQFLLMKRLYGPNWILA*
Ga0102851_129599171	3300009091	Freshwater Wetlands	MKAMLEAAARQFGVPSEVLDLIDRNWISQVIDEFPGLLLPPIMQTLHREYMKNGLEWVRQNVASLRNQLLLLQKLYGPTWIL
Ga0115027_100406844	3300009131	Wetland	MIIESAAEKFGVPGEVLDLIGRDFISQMVEEFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV*
Ga0115027_100610472	3300009131	Wetland	MKAMLEAAARQFGVPSEVLDLIDRNWISQVIDEFPGLLLPPIMQTLHREYMKNGLEWVRQNVASLRNQLLLLQKLYGPTWILA*
Ga0115027_102817462	3300009131	Wetland	VPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLDWIKQNVLSLQEQFLLLKKLYGPTWILA*
Ga0115027_118939852	3300009131	Wetland	MLNLLESAAKKFGVPSEVLDLLGRPIISQIIDEFPTLLLPPIMHTLKRGYVENGLEWVKQNAMSLREQFLLLKRLYGPSWILA*
Ga0105092_103971101	3300009157	Freshwater Sediment	MSIETAARKFGVPAEVLDLIGREFISQVIEEFPGLLLPPIMSTLKQEYVRNGLDWIRQNVLPLQRHFLVLKHMYGV*
Ga0105102_108697641	3300009165	Freshwater Sediment	MENLLESAAKRFGVPPQVLDLIGRDFIAEVIDEFPSLLLPPIMSTLKQEFLKNGLEWTKQNILSLREQFLLLKRLYGPTWILA*
Ga0113563_102219771	3300009167	Freshwater Wetlands	FGVPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLEWIKQNVLSLQEQFLLLKKLYGPTWILA*
Ga0113563_107050803	3300009167	Freshwater Wetlands	ESAAKKFGVPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLDWIKQNVLSLQEQFLLLKKLYGPTWILA*
Ga0113563_107155872	3300009167	Freshwater Wetlands	MLNLLESAAKKFGVPSEVLDLIGRPFISQIIDEFPTLLLPPIMNTLKEEYMKNGLEWIKQNAMSLREQFLLLKKLYGPAWILA*
Ga0105096_100905112	3300009170	Freshwater Sediment	RVPSEVLDLIDRNWISQVIEEFPGLLLPPIMQTLHREYVKNGLEWVRQNVASLRNQLLLLQKLYGPTWILA*
Ga0105096_101816262	3300009170	Freshwater Sediment	MENLLESAAKRFGVPPHVLDLIGRDFIAEVIDEFPSLLLPPIMSTLKQEFLKNGLEWTKQNILSLREQFLLLKRLYGPNWILA*
Ga0115028_1000011212	3300009179	Wetland	MIIESAAEKFGVPGEVLDLIGRDFISQMVEEFPSLLLPPIMSTLRQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV*
Ga0115028_100014626	3300009179	Wetland	MQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLEWIKQNVLSLQEQFLLLKKLYGPTWILA*
Ga0115028_109133081	3300009179	Wetland	RRYTMLNLLESAAKKFGVPSEVLDLIGRPFISQIIDEFPTLLLPPIMNTLKEEYMKNGLEWIKQNAMSLREQFLLLKKLYGPAWILA*
Ga0115028_115145881	3300009179	Wetland	LIESAAKKFGVPSEVLDLLDRNWISQVIDEFPDLLLPPIMEPLKREYVKNGLEWVSQHVTELRNQLQLLQKLYGPTWILA*
Ga0115028_120206931	3300009179	Wetland	IKLGGAPMQNLIEHAAVKFGVPSEVLDLMDRNWISEVIEEFPSLLLPPIMQTLHQEYVKNGMEWVSQHITELRNRIQLLQKLYGPTWILA*
Ga0151652_111097891	3300011340	Wetland	SSGTPNFSARKRAMVIESAAEKFGVPDEVLDLIGRDFISQMVEDFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV*
Ga0075307_10233091	3300014260	Natural And Restored Wetlands	MKVMLETAAKKFGVPSEVLDLIDHNWISQLIDEFPDLLLPPIMQTLHREYVKNGFDWVKQNVGTLQNQFL
Ga0075360_10638111	3300014261	Natural And Restored Wetlands	MGIESAAEKFGVPGEVLDLIGRDFISQMVEDFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV*
Ga0075308_11366551	3300014264	Natural And Restored Wetlands	RYTMQNLLELSAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVENGMEWIKQNVMSLREQFLLLKKLYGPSWILA*
Ga0075359_11221381	3300014266	Natural And Restored Wetlands	MKNLIEAAAEKFGVPSEVLDLLDRNWIAQMIEEFPSLLLPPIMQTLHQEYVKNGMEWVSQNITELRNRIQLLQKLYGPTWILA*
Ga0075340_10046141	3300014304	Natural And Restored Wetlands	MQNLLELSAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVENGLEWIKQNVMSLREQF
Ga0075349_11635611	3300014305	Natural And Restored Wetlands	MKAMLEAAAKKFGVPSEVLDLLDRNWISGLIEEFPDLMLPPIMQTLHQEYVKNGLEWVSQHVTELRNQLQLLQKLYGPTWILA*
Ga0075346_10022442	3300014306	Natural And Restored Wetlands	MKVMLENAAKKFGVPSEVLDLIDHNWISQLIDEFPDLLLPPIMQTLHREYVKNGFDWVKQNVGTLQNQFLLLKKLYGPTWILA*
Ga0075347_10860851	3300014313	Natural And Restored Wetlands	MKAMLEAAARQFGVPGEVLDVIDRKWISQVIDEFPSLLLPPIMQTLHREYVKNGLEWIRQNVASLRTQ
Ga0075350_11271951	3300014315	Natural And Restored Wetlands	MENLIESTARKFGVPTEVLDLIDRQFISKVIDEFPDLLLPPIMNTLKQEYLKNGLGWIKQNVMSLQEQFLLLKRLYGSTWILA*
Ga0075353_12169952	3300014321	Natural And Restored Wetlands	ARKFGVPSAVLDLIGRNFLSQVIDEFPDLLLPPIMSTLKQEYGKNGLEWIKQNVMILQKQFLALKQLYGPTWILA*
Ga0075355_11355171	3300014322	Natural And Restored Wetlands	MPMKNLIEAAAEKFGVPSEVLDLLDRNWISEVIEEFPSLLLPPIMQTLHQEYVKNGMEWVSQNITGLRNRIQLLQNLYGPTWIL
Ga0187786_104968612	3300017944	Tropical Peatland	MQIESAAAKFGVPAEVLDLIGRDFICQTVEEFPSLMLPPIMSTLKQEYIRNGLDWIRQNVLPLQKHFLVLKHMYGV
Ga0187776_101818301	3300017966	Tropical Peatland	SLLESAAKKFGVPSAVLDLVGRNFLSQIIDEFPDLLLPPIMSTLKQEYGKNGLDWIKQNTMILQNQFLVLKQLYGPTWILA
Ga0210339_12165411	3300021332	Estuarine	MKVMLETAAKKFGVPSEVLDLIDHNWISQLIDEFPDLLLPPIMQTLHREYVKNGFDWVKQNVGTLQNQFLLLKKLYGPTWILV
Ga0210339_15385951	3300021332	Estuarine	MQNLLELSAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVENGLEWIKQNVMSLREQFLLLKKLYGPSWILA
Ga0210088_10004998	3300025948	Natural And Restored Wetlands	MQNLLELSAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVENGMEWIKQNVMSLREQFLLLKKLYGPSWILA
Ga0210134_10200541	3300025950	Natural And Restored Wetlands	MKVMLENAAKKFGVPSEVLDLIDHNWISQLIDEFPDLLLPPIMQTLHREYVKNGFDWVKQNVGTLQNQFLLLKKLYGPTWILV
Ga0210104_10332602	3300025956	Natural And Restored Wetlands	MKVMLETAAKKFGVPSEVLDLIDQNWISQLIDEFPDLLLPPIMQTLHREYVKNGFDWVKQNVGTLQNQFLLLKKLYGPTWILV
Ga0210105_10019835	3300025966	Natural And Restored Wetlands	MKVMLETAAKKFGVPSEVLDLIDQNWISQLIDEFPDLLLPPIMNTLKQEYVENGLEWIKQNVMSLREQFLLLKKLYGPSWILA
Ga0210129_10730002	3300026026	Natural And Restored Wetlands	MVIESAAEKFGVPDEVLDLIGRDFISQMVEDFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV
Ga0208539_10159801	3300026069	Natural And Restored Wetlands	TMQNLLELSAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVENGLEWIKQNVMSLREQFLLLKKLYGPSWILA
Ga0256818_10294571	3300026353	Sediment	MKAMLEAAARQFGVPGEVLDVIDRKWISQVIDEFPSLLLPPIMQTLHREYVKNGLEWIRQNVASLRTQCLLLQKLYGPTW
Ga0256804_10204501	3300026372	Sediment	MKAMLEAAARQFGVPGEVLDVIDRKWISQVIDEFPSLLLPPIMQTLHREYVKNGLEWIRQNVASLRTQCLLLQKLYGPTWILA
Ga0256808_10013933	3300026476	Sediment	LLESAAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYMKNGLEWIRQNVISLRQQFLLLKKLYGPSWILA
Ga0256802_10167501	3300026492	Sediment	MKNMIEAAAKQFGVPSEVLDLIDRNWVSQIIDEFPTLLLPPIMQTLHREYVKYGLEWVEQNIASLRKQLLLLQKLYG
Ga0256806_10630262	3300026501	Sediment	MQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYMKNGLEWIRQNVISLRQQFLLL
Ga0208665_100087273	3300027715	Deep Subsurface	MLNLLESAAKKFGVPSEVLDLIGRPFISQIIDEFPTLLLPPIMNTLKQEYMKNGLEWIKQNAMSLREQFLLLKKLYGPAWILA
Ga0208665_100478092	3300027715	Deep Subsurface	MQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLEWIKQNVLSLQEQFLLLKKLYGPTWILA
Ga0208665_100708081	3300027715	Deep Subsurface	MQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVKHGVEWIKQNAMSLREQFLLLKKLYGPAWILA
Ga0209575_102055181	3300027739	Freshwater	SAAEKFGVPGEVLDLIGRDFISQMVEDFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV
Ga0209575_103332281	3300027739	Freshwater	MESLMESAATKAGVPSRVLDLLDRNWISQLVDEFPSLLLPPIMETLHREYVRHGLEWMKQNVDSLKKQFLLMKQLYGPTWILA
Ga0209262_100233723	3300027841	Freshwater	MVIESAAEKFGVPGEVLDLIGRDFISQMVEDFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV
Ga0209262_101340763	3300027841	Freshwater	SISESAATKAGVPSQVLDLLDSNWISQLVDEFPSLLLPPIMETLHREYVRHGLEGMKQNVDSLKKQFLFMKQLYGPTWILA
Ga0209397_100041925	3300027871	Wetland	YAMLNLLESAAKKFGVPSEVLDLIGRPFISQIIDEFPTLLLPPIMNTLKQEYMKNGLEWIKQNAMSLREQFLLLKKLYGPAWILA
Ga0209397_100375953	3300027871	Wetland	LLESAAKKFGVPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLEWIKQNVLSLQEQFLLLKKLYGPTWILA
Ga0209397_100539532	3300027871	Wetland	MKAMLEAAARQFGVPSEVLDLIDRNWISQVIDEFPGLLLPPIMQTLHREYMKNGLEWVRQNVASLRNQLLLLQKLYGPTWILA
Ga0209397_105387891	3300027871	Wetland	MIIESAAEKFGVPGEVLDLIGRDFISQMVEEFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV
Ga0209293_100029263	3300027877	Wetland	MQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLDWIKQNVLSLQEQFLLLKKLYGPTWILA
Ga0209450_100330604	3300027885	Freshwater Lake Sediment	MKNLIEAAAEKFGVPSEVLDLLDRNWISEVIEEFPSLLLPPIMQTLHQEYVKHGMEWVSQNITELRNRIQLLQKLYGPTWILAGQGTYMVFPLTGHLI
Ga0208980_101075092	3300027887	Wetland	MKNLIEAAAEKFGVPSEVLDLLDRNWISEVIEEFPSLLLPPIMQTLHQEYVKNGMEWVSQNITELRNRIQLLQKLYGPTWILA
Ga0208980_103017842	3300027887	Wetland	MKAMLEAAARQFGVPAEVLDLIDRNWISQLIDDFPGLLLPPIMQTLHQEYAKNGLEWVRQNVASLRNQLLLLQKLYGPTWILA
Ga0209496_104407872	3300027890	Wetland	MLNLLESAAKKFGVPSEVLDLIGRPFISQIIDEFPTLLLPPIMNTLKEEYMKNGLEWIKQNAMSLREQFLLLKKLYGPAWILA
Ga0209254_104246182	3300027897	Freshwater Lake Sediment	MKNLIEAAAEKFGVPSEVLDLLDRNWISEVIEEFPSLLLPPIMQTLHQEYVKHGMEWVSQNITELRNRIQLLQKLYGPTWILA
Ga0335070_107507941	3300032829	Soil	MQSLLESAAEKFGVPVAVLDLIGRNFLSQVIDEFPDLLLPPIMSTLKQEYGKNGLEWIKQNAMTLQKQFLVLKQMYGPTWILA
Ga0335070_114318961	3300032829	Soil	MNAMLEAAARQFGVPSEVLDLVDRNWISQVVDEFPSLLLPPIMQTLHREYVKNGLEWIRQNSASLKNQLLLLRKFYGPPWILA
Ga0335071_104400701	3300032897	Soil	MQIESAAAKFGVPAEVLDLIGRDFISQTVEEFPSLMLPPIMSTLKQEYIRNGLDWIRQNVLPLQKHFLVLKHMYGV
Ga0335084_100276524	3300033004	Soil	MQSLLESAARKFGVPSAVLDLIGRNFLSQVIDEFPDLLLPPIMSTLKQEYGKNGLEWIKQNAMILQRQFLALKQLYGPTWILA
Ga0335084_106868252	3300033004	Soil	MESLIDVAAKKAGIPSEVLDLIDRTFLSEVIDDFPDLLLPPIMSTLKQDYVNKGLEWIKQNVMPLKEEFLLLQRLYGPHWILA
Ga0316604_101246162	3300033406	Soil	MQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVKHGVEWIKQNTMSLREQFLLLKKLYGPAWILA
Ga0316603_102044571	3300033413	Soil	PSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLDWIKQNVLSLQEQFLLLKKLYGPTWILA
Ga0316603_105001201	3300033413	Soil	MNNLIETAAKKFGVPSEVLDLLDRNWLSQVIDEFPDLLLPPIMETLHQEYVKNGLEWVSQHVTELRNQLQLLQKLYGPTWILA
Ga0316603_111757551	3300033413	Soil	EVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLDWIKQNVLSLQEQFLLLKKLYGPTWILA
Ga0316619_102654261	3300033414	Soil	MQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLEWIKQNVLSLQEQFLLLKKLYG
Ga0316622_1003297363	3300033416	Soil	ESAAKKFGVPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLDWIKQNVLSLQEQFLLLKKLYGPTWILA
Ga0316625_1020374191	3300033418	Soil	MENLLESAAKRFGVPPQVLDLIGRDFITEVIDEFPSLLLPPIMSTLKQEYLKNGLEWTKQNILSLREQFLLLKRLYGPTWILA
Ga0316625_1024346062	3300033418	Soil	QNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLDWIKQNVLSLQEQFLLLKKLYGPTWILA
Ga0316601_1003632062	3300033419	Soil	MLNLLESAAKKFGVPSEVLDLIGRPFISQIIDEFPTLLLPPIMHTLKRGYVENGLEWVKQNAMSLREQFLLLKRLYGPSWILA
Ga0316613_109680291	3300033434	Soil	MQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVKHGVEWIKQNAMSLREQFLLLKKLYGPAW
Ga0316627_1003808121	3300033482	Soil	MQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVKHGVEWIKQNAMSLREQFLLLKKLYGP
Ga0316627_1020198692	3300033482	Soil	MIVESAAEKFGVPGEVLDLIGRDFISQMIEELPSLLLPPIMSTLKREYARNGIEWVRQNVLPLQKHFLVLKHMYGV
Ga0316627_1028634521	3300033482	Soil	MKVMLETAAKKFGVPSEVLDLIDHNWISQLIDEFPDLLLPPIMQTLHREYVKNGFDWVKQNVGTLQNQFLLLKKLYGPTWILA
Ga0316629_102505522	3300033483	Soil	ARQFGVPSEVLDLIDRNWISQVIDDFPGLLLPPIMQTLHREYVKNGLEWVRQNVASLRNQLLLLQKLYGPTWILA
Ga0316629_105227312	3300033483	Soil	MESLIESTARKFGVPTEVLDLIGRDFITSVIDEFPSLMLPPIMSTLKQEYLKNGLEWTKQNILSLREQFLLLKRLYGPNWILA
Ga0316624_102791722	3300033486	Soil	MQNLLDSAAKKFGVPVVVLELIGRNFLSQVIEEFPDLLLPPIMSTLKQEYVNNGLEWIKQNASSLQKQFLSLKQLYGPTWILA
Ga0316621_104698092	3300033488	Soil	MENLLESAAKRFGVPPQVLDLIGRDFIAEVIDEFPSLLLPPIMSTLKQEFLKNGLEWTKQNILSLREQFLLLKRLYGPNWILA
Ga0316621_108988301	3300033488	Soil	MESLIESTARQSGVPTEVLDLIGRDFITSVIDEFPSLMLPPIMSTLKQEYLKNGLEWTKQSILSLREQFLLMKRLYGPNWILA
Ga0316631_103681391	3300033493	Soil	PMQNLLESAAKKFGVPSEVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLEWIKQNVLSLQEQFLLLKKLYGPTWILA
Ga0316616_1004551311	3300033521	Soil	AMLNLLESAAKKFGVPSEVLDLIGRPFISQIIDEFPTLLLPPIMNTLKEEYMKNGLEWIKQNAMSLREQFLLLKKLYGPAWILA
Ga0316616_1024676732	3300033521	Soil	MKAMLEAAARKFGVPSQVLDVMDRNWLSQVIEEFPSLLLPPIMQTLHQEYVKNGMEWVSQNITELRNRIQLLQKLYGPTWILAGQGTYMVFPLTGHMI
Ga0316617_1001873314	3300033557	Soil	GEVLDLIGRDFISQMIEELPSLLLPPIMSTLKREYGRNGLEWVRQNVLPLQKHFLVLKHMYGV
Ga0316617_1011115552	3300033557	Soil	MENLLESAAKRFGVPPHVLDLIGRDFIAEVIDEFPSLLLPPIMSTLKQEFLKNGLEWTKQNILSLREQFLLLKRLYGPNWILA
Ga0316617_1013557672	3300033557	Soil	MKAMLEAAARQFGVPSEVLDLIDRNWISQVIDDFPGLLLPPIMQTLHREYVKNGLEWVRQNVASLRNQLLLLQKLYGPTWILA
Ga0316617_1022087861	3300033557	Soil	EVLDLIGRQFISQIIDEFPSLLLPPIMNTLKQEYVKNGLEWIKQNVLSLQEQFLLLKKLYGPTWILA
Ga0370480_0000488_4942_5193	3300034169	Untreated Peat Soil	MENLLGSAAKRFGVPDAVLDLIGRDFITELIDEFPSLLLPPIMSTLKQEYLKNGLEWTKQNILSLREQFLLLKRLYGPNWILA
Ga0370480_0056114_837_1067	3300034169	Untreated Peat Soil	MVIESAAEKLGVPGEVLDLIGRDFISQMVEEFPSLLLPPIMSTLKQEYVRNGLEWVRQNVLPLQKHFLVLKHMYGV
Ga0316599_137843_383_634	3300034653	Untreated Peat Soil	MECSLESAAEKFGIPETVLDVIGRQFVSHVIEEYPCLLLPPVMETLKREYVRNGLEWVKENVASIQKQFLLLKRLYGPTWILA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054979

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences