Metagenome / Metatranscriptome Family F040709

Basic Information
Family ID	F040709
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	68 residues
Representative Sequence	MIELIIFIVVALIAWVVWTERKSKQALDKDLLDQAWREVLDDPHYMERRHYEERKRVEDQARAAAANR
Number of Associated Samples	127
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.86 %
% of genes near scaffold ends (potentially truncated)	32.30 %
% of genes from short scaffolds (< 2000 bps)	71.43 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Unclassified (50.311 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands (11.801 % of family members)
Environment Ontology (ENVO)	Unclassified (27.329 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.646 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 66.67% β-sheet: 0.00% Coil/Unstructured: 33.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF01814	Hemerythrin	11.80
PF00571	CBS	10.56
PF04392	ABC_sub_bind	5.59
PF12071	DUF3551	1.86
PF00211	Guanylate_cyc	1.86
PF00248	Aldo_ket_red	1.86
PF00291	PALP	1.86
PF08734	GYD	1.86
PF00892	EamA	1.24
PF02371	Transposase_20	1.24
PF03401	TctC	1.24
PF02482	Ribosomal_S30AE	0.62
PF00126	HTH_1	0.62
PF13202	EF-hand_5	0.62
PF11294	DUF3095	0.62
PF07690	MFS_1	0.62
PF08241	Methyltransf_11	0.62
PF03573	OprD	0.62
PF13763	DUF4167	0.62
PF13414	TPR_11	0.62
PF09361	Phasin_2	0.62
PF00589	Phage_integrase	0.62
PF14696	Glyoxalase_5	0.62
PF02077	SURF4	0.62
PF00583	Acetyltransf_1	0.62
PF01177	Asp_Glu_race	0.62
PF13432	TPR_16	0.62
PF00497	SBP_bac_3	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	5.59
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.86
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.86
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.24
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.24
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	0.62
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.62

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
All Organisms	root	All Organisms	49.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
cellular organisms	root	All Organisms → cellular organisms	49.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.27 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.92 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	29.19 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.70 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	4.35 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
Phreatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae	0.62 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.83 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	4.35 %
Phreatobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter	0.62 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	4.35 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.62 %
Phreatobacter stygius	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	0.62 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.62 %
Methylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium aquaticum	0.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_12109028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2255	Open in IMG/M
2170459019\|G14TP7Y01C8ZG2	Not Available	691	Open in IMG/M
2209111006\|2214797985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2114	Open in IMG/M
3300000045\|ARCol0oldRDRAFT_c01288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1754	Open in IMG/M
3300000787\|JGI11643J11755_11780042	Not Available	1103	Open in IMG/M
3300000890\|JGI11643J12802_10991547	Not Available	661	Open in IMG/M
3300000891\|JGI10214J12806_10496279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2473	Open in IMG/M
3300003994\|Ga0055435_10127520	Not Available	694	Open in IMG/M
3300003995\|Ga0055438_10040340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1167	Open in IMG/M
3300003995\|Ga0055438_10062794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	986	Open in IMG/M
3300003995\|Ga0055438_10202153	Not Available	605	Open in IMG/M
3300004019\|Ga0055439_10337907	Not Available	500	Open in IMG/M
3300004024\|Ga0055436_10018446	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300004058\|Ga0055498_10117507	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300004062\|Ga0055500_10159946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	537	Open in IMG/M
3300004114\|Ga0062593_100294230	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300004114\|Ga0062593_100945342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	877	Open in IMG/M
3300004156\|Ga0062589_100158077	Not Available	1567	Open in IMG/M
3300004156\|Ga0062589_100538029	Not Available	996	Open in IMG/M
3300004157\|Ga0062590_100210649	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300005093\|Ga0062594_102151266	Not Available	602	Open in IMG/M
3300005161\|Ga0066807_1014537	Not Available	759	Open in IMG/M
3300005162\|Ga0066814_10005630	Not Available	1354	Open in IMG/M
3300005205\|Ga0068999_10078281	Not Available	629	Open in IMG/M
3300005218\|Ga0068996_10004447	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300005276\|Ga0065717_1002328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2169	Open in IMG/M
3300005289\|Ga0065704_10100218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2282	Open in IMG/M
3300005290\|Ga0065712_10479496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	664	Open in IMG/M
3300005332\|Ga0066388_105115884	Not Available	666	Open in IMG/M
3300005332\|Ga0066388_107907893	Not Available	532	Open in IMG/M
3300005337\|Ga0070682_101059797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	676	Open in IMG/M
3300005353\|Ga0070669_100314010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1264	Open in IMG/M
3300005548\|Ga0070665_101855560	Not Available	609	Open in IMG/M
3300005764\|Ga0066903_100352926	Not Available	2379	Open in IMG/M
3300005764\|Ga0066903_104387270	Not Available	753	Open in IMG/M
3300005937\|Ga0081455_10251816	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300005980\|Ga0066798_10131095	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	710	Open in IMG/M
3300006041\|Ga0075023_100010297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium aquaticum	2408	Open in IMG/M
3300006041\|Ga0075023_100146021	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300006057\|Ga0075026_100251277	Not Available	949	Open in IMG/M
3300006057\|Ga0075026_100635673	Not Available	631	Open in IMG/M
3300006196\|Ga0075422_10005136	All Organisms → cellular organisms → Bacteria → Proteobacteria	4106	Open in IMG/M
3300006358\|Ga0068871_101365977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	667	Open in IMG/M
3300006844\|Ga0075428_101113608	Not Available	834	Open in IMG/M
3300006871\|Ga0075434_101153773	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300009176\|Ga0105242_13327169	Not Available	500	Open in IMG/M
3300009545\|Ga0105237_11039785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	826	Open in IMG/M
3300009545\|Ga0105237_11073045	Not Available	812	Open in IMG/M
3300010043\|Ga0126380_11491446	Not Available	598	Open in IMG/M
3300010375\|Ga0105239_12820115	Not Available	567	Open in IMG/M
3300011107\|Ga0151490_1684755	Not Available	1061	Open in IMG/M
3300012480\|Ga0157346_1000781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1411	Open in IMG/M
3300012495\|Ga0157323_1009322	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300012883\|Ga0157281_1076884	Not Available	566	Open in IMG/M
3300012896\|Ga0157303_10152108	Not Available	622	Open in IMG/M
3300012897\|Ga0157285_10205513	Not Available	622	Open in IMG/M
3300012914\|Ga0157297_10012155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1782	Open in IMG/M
3300012931\|Ga0153915_10086856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	3290	Open in IMG/M
3300012931\|Ga0153915_10450082	Not Available	1465	Open in IMG/M
3300012931\|Ga0153915_10524396	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300012931\|Ga0153915_11322208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	842	Open in IMG/M
3300012931\|Ga0153915_11706723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	737	Open in IMG/M
3300012931\|Ga0153915_12945262	Not Available	555	Open in IMG/M
3300012961\|Ga0164302_10170216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1306	Open in IMG/M
3300012984\|Ga0164309_10011680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4360	Open in IMG/M
3300012988\|Ga0164306_10709898	Not Available	800	Open in IMG/M
3300012989\|Ga0164305_10541920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	924	Open in IMG/M
3300013297\|Ga0157378_10778068	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300013307\|Ga0157372_12175651	Not Available	637	Open in IMG/M
3300014308\|Ga0075354_1057180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	733	Open in IMG/M
3300014308\|Ga0075354_1061965	Not Available	712	Open in IMG/M
3300014318\|Ga0075351_1029477	Not Available	915	Open in IMG/M
3300014318\|Ga0075351_1037890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	844	Open in IMG/M
3300014321\|Ga0075353_1074231	Not Available	752	Open in IMG/M
3300014324\|Ga0075352_1212407	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300015201\|Ga0173478_10374771	Not Available	673	Open in IMG/M
3300015371\|Ga0132258_10066682	All Organisms → cellular organisms → Bacteria	8326	Open in IMG/M
3300015371\|Ga0132258_10302927	All Organisms → cellular organisms → Bacteria → Proteobacteria	3931	Open in IMG/M
3300015372\|Ga0132256_100187837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2105	Open in IMG/M
3300015372\|Ga0132256_100315713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1650	Open in IMG/M
3300015373\|Ga0132257_100228312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2216	Open in IMG/M
3300016387\|Ga0182040_11610425	Not Available	553	Open in IMG/M
3300016422\|Ga0182039_10852046	Not Available	811	Open in IMG/M
3300017939\|Ga0187775_10056122	Not Available	1217	Open in IMG/M
3300017939\|Ga0187775_10282986	Not Available	648	Open in IMG/M
3300017944\|Ga0187786_10177117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	792	Open in IMG/M
3300017966\|Ga0187776_10188212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1292	Open in IMG/M
3300017966\|Ga0187776_10463837	Not Available	860	Open in IMG/M
3300017974\|Ga0187777_10004896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8517	Open in IMG/M
3300018032\|Ga0187788_10143961	Not Available	894	Open in IMG/M
3300018032\|Ga0187788_10541840	Not Available	508	Open in IMG/M
3300018058\|Ga0187766_10114988	All Organisms → cellular organisms → Bacteria → Proteobacteria	1644	Open in IMG/M
3300018060\|Ga0187765_10215237	Not Available	1116	Open in IMG/M
3300022899\|Ga0247795_1028548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	910	Open in IMG/M
3300023067\|Ga0247743_1000832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3202	Open in IMG/M
3300025457\|Ga0208850_1021502	Not Available	1146	Open in IMG/M
3300025535\|Ga0207423_1055223	Not Available	703	Open in IMG/M
3300025538\|Ga0210132_1032008	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300025549\|Ga0210094_1020059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1069	Open in IMG/M
3300025560\|Ga0210108_1020406	Not Available	1200	Open in IMG/M
3300025725\|Ga0209638_1108800	Not Available	963	Open in IMG/M
3300025912\|Ga0207707_10199052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1747	Open in IMG/M
3300025919\|Ga0207657_10588925	Not Available	868	Open in IMG/M
3300025923\|Ga0207681_11126245	Not Available	659	Open in IMG/M
3300025933\|Ga0207706_10449260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1115	Open in IMG/M
3300025985\|Ga0210117_1069937	Not Available	607	Open in IMG/M
3300026054\|Ga0208659_1000039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2861	Open in IMG/M
3300026067\|Ga0207678_10442355	Not Available	1129	Open in IMG/M
3300026362\|Ga0256801_1002718	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300026452\|Ga0256821_1004512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1281	Open in IMG/M
3300026452\|Ga0256821_1011364	Not Available	882	Open in IMG/M
3300026464\|Ga0256814_1013111	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300026800\|Ga0207742_103652	All Organisms → cellular organisms → Bacteria → Proteobacteria	1382	Open in IMG/M
3300026802\|Ga0207511_101198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1604	Open in IMG/M
3300026830\|Ga0207861_100967	All Organisms → cellular organisms → Bacteria → Proteobacteria	2013	Open in IMG/M
3300026912\|Ga0208520_1001371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	869	Open in IMG/M
3300026979\|Ga0207817_1033822	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300026990\|Ga0207824_1035958	Not Available	526	Open in IMG/M
3300027011\|Ga0207740_1009203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1488	Open in IMG/M
3300027401\|Ga0208637_1013622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	849	Open in IMG/M
3300027560\|Ga0207981_1003832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2662	Open in IMG/M
3300027894\|Ga0209068_10008342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4890	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1000821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5220	Open in IMG/M
3300031170\|Ga0307498_10007368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2056	Open in IMG/M
3300031170\|Ga0307498_10205229	Not Available	690	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10007334	All Organisms → cellular organisms → Bacteria → Proteobacteria	2846	Open in IMG/M
3300031226\|Ga0307497_10215144	Not Available	840	Open in IMG/M
3300031280\|Ga0307428_1000878	All Organisms → cellular organisms → Bacteria → Proteobacteria	16692	Open in IMG/M
3300031890\|Ga0306925_11672761	Not Available	615	Open in IMG/M
3300032001\|Ga0306922_12075003	Not Available	552	Open in IMG/M
3300032261\|Ga0306920_100958643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1248	Open in IMG/M
3300032954\|Ga0335083_10117810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2574	Open in IMG/M
3300033004\|Ga0335084_11479982	Not Available	672	Open in IMG/M
3300033433\|Ga0326726_10011269	All Organisms → cellular organisms → Bacteria	7891	Open in IMG/M
3300033433\|Ga0326726_10014877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6795	Open in IMG/M
3300033433\|Ga0326726_10017818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6184	Open in IMG/M
3300033433\|Ga0326726_10061528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3299	Open in IMG/M
3300033433\|Ga0326726_10279735	Not Available	1561	Open in IMG/M
3300033433\|Ga0326726_11990325	Not Available	565	Open in IMG/M
3300033433\|Ga0326726_12480343	Not Available	503	Open in IMG/M
3300033475\|Ga0310811_10002922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21451	Open in IMG/M
3300033486\|Ga0316624_10567863	Not Available	982	Open in IMG/M
3300033513\|Ga0316628_100218516	Not Available	2306	Open in IMG/M
3300033513\|Ga0316628_102397752	Not Available	698	Open in IMG/M
3300034090\|Ga0326723_0024571	Not Available	2474	Open in IMG/M
3300034090\|Ga0326723_0155739	Not Available	1005	Open in IMG/M
3300034090\|Ga0326723_0408134	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.50%
Host-Associated	Host-Associated	19.88%
Engineered	Engineered	0.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.14%
Aquatic	Environmental → Aquatic	22.36%
Plants	Host-Associated → Plants	19.88%
Solid Waste	Engineered → Solid Waste	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.93%
Marine	Environmental → Aquatic → Marine	12.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.70%
Freshwater	Environmental → Aquatic → Freshwater	6.21%
Peat	Environmental → Terrestrial → Peat	6.21%
Sediment	Environmental → Aquatic → Sediment	3.73%
Roots	Host-Associated → Plants → Roots	0.62%
Grass	Engineered → Solid Waste → Grass	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.29%
Wetlands	Environmental → Aquatic → Marine → Wetlands	11.80%
Loam	Environmental → Terrestrial → Soil → Loam	7.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.48%
Sand	Environmental → Terrestrial → Soil → Sand	1.24%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.62%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.62%
Composting	Engineered → Solid Waste → Grass → Composting	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.66%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	11.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.35%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.24%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.24%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.62%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.62%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	11.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.21%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	6.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.35%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	4.35%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.35%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.11%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.24%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.24%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.24%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.24%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300000045	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis Col-0 old rhizosphere	Host-Associated	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005980	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025535	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025985	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026054	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026362	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 C6	Environmental	Open in IMG/M
3300026452	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4	Environmental	Open in IMG/M
3300026464	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS5	Environmental	Open in IMG/M
3300026800	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 43 (SPAdes)	Environmental	Open in IMG/M
3300026802	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-C (SPAdes)	Environmental	Open in IMG/M
3300026830	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 33 (SPAdes)	Environmental	Open in IMG/M
3300026912	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027011	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)	Environmental	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031280	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-240	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0610.00002610	2162886012	Miscanthus Rhizosphere	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGGS
4MG_00723080	2170459019	Switchgrass, Maize And Mischanthus Litter	MVELTIIFIVVAFIAWVVWTERKSKLALDKELLEQAWREVLDDPHYMERRHYEERKRVEDQARAAAANR
2213826264	2209111006	Arabidopsis Rhizosphere	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARA
ARCol0oldRDRAFT_012884	3300000045	Arabidopsis Rhizosphere	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGG
JGI11643J11755_117800422	3300000787	Soil	MVVTIIVIVVAFIAWIVWTEQKSKQALDKDLLDQAWREVLDDPHYMERRHYEERKRVEDQARATAANR*
JGI11643J12802_109915472	3300000890	Soil	MVVTIIVIVVAFIAWIVWTEQKSKQALDKDLLDQAWREVLDDPHYMERRHYEERKRVEDQARATAA
JGI10214J12806_104962791	3300000891	Soil	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKR
Ga0055435_101275202	3300003994	Natural And Restored Wetlands	VGLVLVACIAWVVWIERKSKLALEKDALDQDWREMPNDPQYAERRHFEERKRIVDQARADAAGR*
Ga0055438_100403402	3300003995	Natural And Restored Wetlands	MIELIIFIVVALIAWVVWTEPKSKEALDKDLLDQAWREVLDDPQYMERRHYEERKRVEDQARTAAANR*
Ga0055438_100627941	3300003995	Natural And Restored Wetlands	MLDIIYIVGLVLVACIAWVVWIERKSKLALEKDALDQDWREMPNDPQYAERRHFEERKRIVDQARADAAGR*
Ga0055438_102021532	3300003995	Natural And Restored Wetlands	MVAIIIIFIVVVCIAWVVWTEQKSKQALDRDALDQAWREVLDDPHYMERRHYEERKRVEGQARAAAANR*
Ga0055437_100161323	3300004009	Natural And Restored Wetlands	SKQALDRDALDQAWREVLDDPHYMERRHYEERKRVEGQARAAAANR*
Ga0055439_100975453	3300004019	Natural And Restored Wetlands	WVVWTEQKSKQALDRDALDQAWREVLDDPHYMERRHYEERKRVEGQARAAAANR*
Ga0055439_103379072	3300004019	Natural And Restored Wetlands	VLVACIAWVVWIERKSKLALEKDALDQDWREMPNDPQYAERRHFEERKRIVDQARADAAGR*
Ga0055440_100688202	3300004020	Natural And Restored Wetlands	WTPRKSKQALDKDALDQAWREVLDDPHYMERRHYEERMRVEDQARAATANR*
Ga0055436_100184461	3300004024	Natural And Restored Wetlands	MLDIFYIVGLVLVACIAWVVWIERKSKLALEKDALDQDWREMPNDPQYAERRHFEERKRIVDQARADAAGR*
Ga0055498_101175072	3300004058	Natural And Restored Wetlands	MIELIIFIVVAFIAWVVWTERKSKQALDKHLLDEARREVLDDPHYIERRHYEERKRVEDQARAAAANR*
Ga0055500_101599462	3300004062	Natural And Restored Wetlands	VAFIAWVVWTERKSKQALDKHLLDEARREVLDDPHYIERRHYEERKRVEDQARAAAANR*
Ga0062593_1002942302	3300004114	Soil	MVVTIILIVVAFIAWVVWTEQKSKQALDKDLLDQAWREVIDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0062593_1009453422	3300004114	Soil	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGGS*
Ga0062589_1001580771	3300004156	Soil	IAWVVWTERKSKQALDKDALDEAWREVLDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0062589_1005380292	3300004156	Soil	MIELIIFIVVALIAWVVWTERKSKQALDKDLLDQAWREVLDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0062590_1002106492	3300004157	Soil	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGGS*
Ga0062594_1021512662	3300005093	Soil	GDAMVVTIILIVVAFIAWVVWTEQKSKQALDKDLLDQAWREVIDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0066807_10145372	3300005161	Soil	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYKERMRIEDEARAAAAKRASVGSDGIGGS*
Ga0066814_100056303	3300005162	Soil	MVVTIILIVVAFIAWVVWTEQKSKQALDKDLLDQAWREVLDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0066810_100227681	3300005169	Soil	KSKQALDKDLLDKAWREVLDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0068999_100782811	3300005205	Natural And Restored Wetlands	MVAIIIIFIVVVCIAWVVWTEQKSKQALDRDALDQAWREVLDDPHYMERRHYEERKRVEDQARAAATNR*
Ga0068996_100044471	3300005218	Natural And Restored Wetlands	MLEIITIIVLVPVACIAWMIWTERKSKQALDRDALDQAWREVPDDPNYAERRHFEERKRVVDQARADTAAN*
Ga0065717_10023281	3300005276	Arabidopsis Rhizosphere	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEAR
Ga0065704_101002181	3300005289	Switchgrass Rhizosphere	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAA
Ga0065712_104794962	3300005290	Miscanthus Rhizosphere	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVG
Ga0066388_1051158842	3300005332	Tropical Forest Soil	MFEIINIAALLMLTCIAWVVWTERKSKQALDKDALDQAWRDVPDDPHHAERRHYEERKRVVDQAHAVAAERPNGLQRAQRPAH*
Ga0066388_1079078932	3300005332	Tropical Forest Soil	MRDAHAKYEEQNMLEIIITVGLLAVVCLAWVVWTESKSKQTLDKDTLDQAWRDVLDDPHHAEQRHYEERKRVVDHARAVA
Ga0070682_1010597971	3300005337	Corn Rhizosphere	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAA
Ga0070669_1003140103	3300005353	Switchgrass Rhizosphere	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAK
Ga0068867_1012710291	3300005459	Miscanthus Rhizosphere	VVWTEQKSKQALDKDLLDQAWREVIDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0070665_1018555601	3300005548	Switchgrass Rhizosphere	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGI
Ga0066903_1003529265	3300005764	Tropical Forest Soil	MFEIINIVALLMLTCVAWVVWTERKSKQALDKDALDQAWRDVPDDPHHAERRHYEERKRVVDQAHAVAAERPNGLQRAQRPAH*
Ga0066903_1043872701	3300005764	Tropical Forest Soil	MLEIIITVGLLAVVCLAWVVWTESKSKQTLDKDTLDQAWRDVLDDPHHAEQRHYEERKRVVDHARAVAVD
Ga0081455_102518162	3300005937	Tabebuia Heterophylla Rhizosphere	MMEIINIVGLVVIVCIAWMVWTERKSKQALDNDLLDQAWREDPDEPLYADRHHYEERKRVVDQARADAAGR*
Ga0066798_101310952	3300005980	Soil	MLEIINIIILILVASIAWVVWTERKSKQALDKDALNQAWREVLDDPHYIERRHYEERMRVEDEARAAAAKHAERAGPNP*
Ga0075023_1000102973	3300006041	Watersheds	MIVNIVILIVVVCIAWVVWTERKSKQALDKDALDEAWREVLDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0075023_1001460212	3300006041	Watersheds	MLFNIIILFMVASIAWVVWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRVEDEARAAAAAASSEKGGAR*
Ga0075028_1000144424	3300006050	Watersheds	RKSKQALDKDALDEAWREVLDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0075026_1002512773	3300006057	Watersheds	MVAIIIIFIVVGCIAWVVWTPRKSKQALDKDALDQAWREVLDDPHYMERRHYEERMRVEDQARAAAANR*
Ga0075026_1006356732	3300006057	Watersheds	MIEFTVIFIVVAFIAWVVWTERKSKLALDKDLLDQAWREVLDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0075422_100051365	3300006196	Populus Rhizosphere	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIELRHYEERMRIQDEARAAAAKRASVGSSGIGGS*
Ga0068871_1013659771	3300006358	Miscanthus Rhizosphere	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRAS
Ga0075428_1011136082	3300006844	Populus Rhizosphere	IIFIVVAFIAWVVWTERKSKQALDKDLLDQAWREVLDDPHYMERRHYEERMRVEDQARAAAANR*
Ga0075434_1011537731	3300006871	Populus Rhizosphere	AWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGGS*
Ga0105242_133271691	3300009176	Miscanthus Rhizosphere	MVVTIILIVVAFIAWVVWTEQKSKQALDKDLLDQAWREVIDDPHYMERRHYEERKRVEDQARA
Ga0105237_110397851	3300009545	Corn Rhizosphere	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSS
Ga0105237_110730451	3300009545	Corn Rhizosphere	IVVAFIAWVVWTEQKSKQALDKDLLDQAWREVIDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0126380_114914461	3300010043	Tropical Forest Soil	MRDAHAKYAEQNMLETINIVGLLVAVCLAWFVWTESKSKQTLDKDALDQAWREAPDDPRYAERRHYEERKRVVDQARASLPR*
Ga0105239_128201152	3300010375	Corn Rhizosphere	MVVTIILIVVAFIAWVVWTEQKSKQALDKDLLDQAWREVIDDPHDMERRHYEERKRVEDQARAAAANR*
Ga0151490_16847551	3300011107	Soil	IAWVVWTEQKSKQALDKDLLDQAWREVLDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0137370_109047751	3300012285	Vadose Zone Soil	LLRTSKQALEKDALDQAWREVLDDPHYMERRHYEERMRVEDQARAAAANR*
Ga0157346_10007812	3300012480	Arabidopsis Rhizosphere	MLFNIIILFMIASFAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGGS*
Ga0157323_10093221	3300012495	Arabidopsis Rhizosphere	IAWVLWTERKSKQALDKDAWDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGGS*
Ga0157281_10768841	3300012883	Soil	IIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGGS*
Ga0157303_101521082	3300012896	Soil	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARA
Ga0157285_102055132	3300012897	Soil	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVG
Ga0157297_100121551	3300012914	Soil	IAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGGS*
Ga0153915_100868562	3300012931	Freshwater Wetlands	MAEITIILILAACIGWAAWTVQKSKQALDKDALDQAWREVLNDPHYMERRHYEERMRVENQARAAVANRSSHTEPLTR*
Ga0153915_104500822	3300012931	Freshwater Wetlands	MAQIITIIVLVAVFCIAWVIWTERKSKKALDKDALEQAWREVPDDPHYVERRHFEERKRVEDQARAAAAKH*
Ga0153915_105243962	3300012931	Freshwater Wetlands	MEIILILFVVACIISIVWKVRTHNQALKKAALDQAWREVLDDPHYMERRHLEERKRVVDQARHAAAIR*
Ga0153915_113222082	3300012931	Freshwater Wetlands	MAQILNIIILIVVVGIAWVIWTERKSKQALDKDALDQAWREVPDDPHSVERRHYEERMRVENQARADAAKH*
Ga0153915_117067232	3300012931	Freshwater Wetlands	MPEIITIIVLVVVVCIAWVIWTEQKSKKALDKDALEQAWREVPDDPHYVERRQFEERKRVENQARAAAAKH*
Ga0153915_129452621	3300012931	Freshwater Wetlands	MVAIIIIIFIVVVCVAWVLWTPRKSKQALDKDALDQAWREVLDDPHYMERRHYEERMRVEDQARTAAANR*
Ga0164302_101702161	3300012961	Soil	MVELTIIFIVVAFIAWVVWTERKSKLALDKELLEQAWREVLDEPHYMERRHYEERKRVEDQARAAAANR*
Ga0164309_100116807	3300012984	Soil	MVELTIIFIVVAFIAWVVWTERKSKLALDKELLEQAWREVLDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0164306_107098982	3300012988	Soil	AFIAWVVWTERKSKLALDKELLEQAWREVLDDPHYMERRHYEERMRVEDQAWAAAANR*
Ga0164305_105419202	3300012989	Soil	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQD
Ga0157378_107780681	3300013297	Miscanthus Rhizosphere	LPGGEGANLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGGS*
Ga0157372_121756512	3300013307	Corn Rhizosphere	AFIAWVVWTEQKSKQALDKDLLDQAWREVIDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0075354_10571801	3300014308	Natural And Restored Wetlands	MIELIIFIVVAFIAWVVWTERKSKQALDKHLLDEARREVLDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0075354_10619651	3300014308	Natural And Restored Wetlands	MVAIIIIFIVVVCIAWVVWTEQKSKQALERDALDQAWREVLDDPHYVERRHFEERKRVEDQARAAAANR*
Ga0075351_10294772	3300014318	Natural And Restored Wetlands	MAAIIIILIVVVCIAWVVWTERKSKQALDKDALDQAWREVLDDPHYMERRHYEERKRVEGQARAAAANR*
Ga0075351_10378902	3300014318	Natural And Restored Wetlands	MLFNIIILFMVASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRVEDEAR
Ga0075353_10742312	3300014321	Natural And Restored Wetlands	MLEIITIIVLVPVACIAWMIWTERKSKQALDRDALDQAWREVPDDPNYAERRHFEERKRVVDRARSGG*
Ga0075352_12124072	3300014324	Natural And Restored Wetlands	MIELIIFIVVAFIAWVVWTERKSKQALDKHLLDEARREVLDDPHYIERRHYEERKRVEDQARAA
Ga0173478_103747712	3300015201	Soil	IAWVVWTERKSKEALDKDLLDQAWREVLNDPHYMERRHYEERKRVEDQARAAAANR*
Ga0132258_100666827	3300015371	Arabidopsis Rhizosphere	MIELIIFIVVAFIAWVVWTERKSKEALDKDLLEQAWREVLDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0132258_103029271	3300015371	Arabidopsis Rhizosphere	MIELIIFIVVAFIAWVAWTERKSKQALDKDLLDQAWREVLDDPHYMERRHYEERKRVEDQARAAAANR*
Ga0132256_1001878372	3300015372	Arabidopsis Rhizosphere	MIELIIFIVVAFIAWVVWTERKSKEALDKDMLDQAWREVLDDPNYMERRHYEERKRVEDQARAAAANR*
Ga0132256_1003157133	3300015372	Arabidopsis Rhizosphere	MIELIIFIVVALIAWVVWTERKSKQALDKDLLDQAWREVLDDPHYMERRHYEERKRVEDQARDSAANR*
Ga0132257_1002283121	3300015373	Arabidopsis Rhizosphere	MIELIIFIVVAFIAWVVWTERKSKEALDKDLLEQAWREVLDDPHYMERRHYEERKRV
Ga0132255_1044662032	3300015374	Arabidopsis Rhizosphere	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRI
Ga0182034_110317132	3300016371	Soil	LAWVVWTESKSKQTLDKDTLDQAWRDVLDDPHHAEQRHYEERKRVVDHARAVAADG
Ga0182040_116104252	3300016387	Soil	MFEIIIIVGFLAVVCLAWVVWTESKSKQTLDKDTLDQAWRDVLDDSHHAEQRHYEERKRVVDHARAVAADG
Ga0182039_108520461	3300016422	Soil	MQDAHAKYEEQNMLEIIIIVGLLAVVCLAWVVWTESKSKQTLDKDTLDQAWRDVLDDPHHAEQRHYEERKRVVDHARAVAADG
Ga0187775_100561222	3300017939	Tropical Peatland	MLQIITIVLLFLVACTAWVLWTEAKSKQALDRDALEQAWRNGMNDPNYTERRHYEERKRVVDQAHSKIGASPL
Ga0187775_102829861	3300017939	Tropical Peatland	VLEIINIIILFVVTFIAWVVWTERKSKQALDKDALDQAWREVLDDPRYIERRHYEERMRVEDEARAAAAKHAARAEPNP
Ga0187786_101771172	3300017944	Tropical Peatland	MLNIITIVGFISVACIAWVVWTERKSKQALDKDTLEQAWREAPDDPFYAERHHYEERKRVVDQARSKTGGSSL
Ga0187776_101882123	3300017966	Tropical Peatland	MPHIVIIIMLVVVVGIAWVAWTERKSKQALDKDALDQAWREVLDDPHYVERRHYEERKRVEDQARSAAAKH
Ga0187776_104638372	3300017966	Tropical Peatland	VLEIINIIILFVVTFIAWVVWTERKSKQALDKDALDQAWREVLDDPRYIERRHYEERMRVEDEARAAAAKHAVQAEPNP
Ga0187777_1000489610	3300017974	Tropical Peatland	MGGCAMLEIIIIIIVVLVPIACIAWMMWTERKSKQALDRDALDQAWREGPNDPNYADRHHFEERKRVVDQARSGTTHR
Ga0187788_101439612	3300018032	Tropical Peatland	MLQIITIVLLFLVACTAWVLWTEAKSKQALDRDALEQAWRNGMNDPNCTERRHYEERKRVVDQAHSKIGASPL
Ga0187788_105418401	3300018032	Tropical Peatland	MAELTVIFIILACVAWGVWTVRKHEQALKEAALDGAWREVLDDPHYVERRHLEERKRVVDKARAAAANR
Ga0187766_101149881	3300018058	Tropical Peatland	MGGCAMLEIIIIIVVLVPIACIAWMMWTERKSKQALDRDALDQAWREGPNDPNYADRHHFEERKRVVDQARSGTTPR
Ga0187765_102152372	3300018060	Tropical Peatland	MLEIIIIIIVVLVPIACIAWMMWTERKSKQALDRDALDQAWREGPNDPNYADRHHFEERKRVVDQARSGTTPR
Ga0247795_10285482	3300022899	Soil	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGGS
Ga0247743_10008326	3300023067	Soil	IASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGGS
Ga0208850_10215022	3300025457	Arctic Peat Soil	MLEIINIIILILVASIAWVVWTERKSKQALDKDALNQAWREVLDDPHYIERRHYEERMRVEDEARAAAAKHAERAGPNP
Ga0207423_10552231	3300025535	Natural And Restored Wetlands	MIELIIFIVVALIAWVVWTEPKSKEALDKDLLDQAWREVLDDPQYMERRHYEERKRVEDQARTAAANR
Ga0210132_10320081	3300025538	Natural And Restored Wetlands	LDIIYIVGLVLVACIAWVVWIERKSKLALEKDALDQDWREMPNDPQYAERRHFEERKRIVDQARADAAGR
Ga0210132_10371472	3300025538	Natural And Restored Wetlands	WTPRKSKQALDKDALDQAWREVLDDPHYMERRHYEERMRVEDQARAATANR
Ga0210094_10200591	3300025549	Natural And Restored Wetlands	WVVWTEPKSKEALDKDLLDQAWREVLDDPQYMERRHYEERKRVEDQARTAAANR
Ga0210108_10204063	3300025560	Natural And Restored Wetlands	MLDIIYIVGLVLVACIAWVVWIERKSKLALEKDALDQDWREMPNDPQYAERRHFEERKRIVDQARADAAGR
Ga0209638_11088002	3300025725	Arctic Peat Soil	IINIIILILVASIAWVVWTERKSKQALDKDALNQAWREVLDDPHYIERRHYEERMRVEDEARAAAAKHAERAGPNP
Ga0207707_101990521	3300025912	Corn Rhizosphere	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSSGIGG
Ga0207657_105889252	3300025919	Corn Rhizosphere	MVVTIILIVVAFIAWVVWTEQKSKQALDKDLLDQAWREVIDDPHYMERRHYEERKRVEDQARAAAANR
Ga0207681_111262451	3300025923	Switchgrass Rhizosphere	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEARAAAAKRASVGSS
Ga0207706_104492603	3300025933	Corn Rhizosphere	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIQDEAR
Ga0210117_10699371	3300025985	Natural And Restored Wetlands	MLEIITIIVLVPVACIAWMIWTERKSKQALDRDALDQAWREVPDDPNYAERRHFEERKRVVDQARADTAAN
Ga0208659_10000391	3300026054	Natural And Restored Wetlands	MIELIIFIVVAFIAWVVWTEQKSKQALERDALDQAWREVLDDPHYMERRHYEERMRVEDQARAAAANR
Ga0207678_104423553	3300026067	Corn Rhizosphere	MVVTIILIVVAFIAWVVWTEQKSKQALDKDLLDQAWREVLDDPHYMERRHYEERKRVEDQARAAAANR
Ga0207708_116261042	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	KQALDKDLLDQAWREVIDDPHYMERRHYEERKRVEDQARAAAANR
Ga0256801_10027181	3300026362	Sediment	MLEIITIIVLVPIACIAWMIWTEQKSKQALDRDALDQAWREVPDDPNYAERRHFEERKRVVDQARADTAAN
Ga0256821_10045123	3300026452	Sediment	MIELIIVIVVALIAWVVWTEPKSKEALDKDLLDQAWREVLDDPQYMERRHYEERKRVEDQARTAAANR
Ga0256821_10113642	3300026452	Sediment	MTEIIIILVVVCIAWVAWTAQKSKQAFDKDALEQAWREVLDDPHHMERRHYEERKRVENQARAAAANR
Ga0256814_10131111	3300026464	Sediment	LRGALEGGCIMLEIITIIVLVPIACIAWMIWTEQKSKQALDRDALDQAWREVPDDPNYAERRHFEERKRVVDQARADTAAN
Ga0207742_1036521	3300026800	Tropical Forest Soil	DRCAVFQGWIRMLEITNIVILVLVSCIAWIVWTERKSKQALDKDALDQAWREVLNDPNYAERRHFEERKRVVDQARASAADG
Ga0207511_1011983	3300026802	Soil	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIEDEARAAAAKRARVGSSGIGGS
Ga0207861_1009674	3300026830	Tropical Forest Soil	MLEITNIVILVLVSCIAWIVWTERKSKQALDKDALDQAWREVLNDPNYAERRHFEERKRVVDQARASAADG
Ga0208520_10013711	3300026912	Soil	MVASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYKERMRIEDEARAAAAKRASVGSDGIGGS
Ga0207817_10338221	3300026979	Tropical Forest Soil	MLEITNIVILVLVSCIAWIVWTERKSKQALDKDALDQAWREVLNDPNYAERRHFEERKRVVD
Ga0207824_10359582	3300026990	Tropical Forest Soil	KNSALIDRCAVFQGWIRMLEITNIVILVLVSCIAWIVWTERKSKQALDKDALDQAWREVLNDPNYAERRHFEERKRVVDQARASAADG
Ga0207740_10092031	3300027011	Tropical Forest Soil	FQGWIRMLEITNIVILVLVSCIAWIVWTERKSKQALDKDALDQAWREVLNDPNYAERRHFEERKRVVDQARASAADG
Ga0208637_10136221	3300027401	Soil	MIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIEDEARAAAAKR
Ga0207981_10038323	3300027560	Soil	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYKERMRIEDEARAAAAKRASVGSDGIGGS
Ga0209068_100083422	3300027894	Watersheds	MIVNIVILIVVVCIAWVVWTERKSKQALDKDALDEAWREVLDDPHYMERRHYEERKRVEDQARAAAANR
Ga0307292_100161964	3300028811	Soil	LLRTSKQALEKDALDQAWREVLDDPHYMERRHYEERMRVEDQARAAAANR
(restricted) Ga0255311_10008217	3300031150	Sandy Soil	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREGPDDPHYIERRHYEERRRIEDEARAAAAKRASVGSSGIGGS
Ga0307498_100073683	3300031170	Soil	MAELTIIFIVVAFITWVAWTVQKSKQALDKDALDEAWREVLDDPHYMERRHYEERKRVEDYDYRHAAAVKS
Ga0307498_102052291	3300031170	Soil	MLFNIIILFMVASISWVLWTERKSKQALDKDALDQAWREVPDDPHYFERRHYEERMRVEDEARAAAAKR
(restricted) Ga0255310_100073344	3300031197	Sandy Soil	MLFNIIILFMITSIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIEDEARAAAAKRASVGSDGIGGS
Ga0307497_102151442	3300031226	Soil	MTELTIIFIVVAFIAWVAWTAQKSKQALDKDALDQAWREVLVDPHYIERRHYEERMRVEDEARAAAAKR
Ga0170824_1197985042	3300031231	Forest Soil	ALDKDALDQAWREVPDDPHYIERRHYEERMRVEDEARAAAAKR
Ga0307428_10008784	3300031280	Salt Marsh	MLALLEIIIILIVVACIAWAVRSARQHKQAINECALDKAWRQVLDDPHYAERRHIEERKRVVDQARHAAANR
Ga0306925_116727612	3300031890	Soil	MFEIIIIVGFLAVVCLAWVVWTESKSKQTLDKDTLDQAWRDVLDDPHHAEQRHYEERKRVVDHARAVAADG
Ga0306922_120750031	3300032001	Soil	MFEIIIIVGFLAVVCLAWVVWTESKSKQTLDKDTLDQAWRDVLDDPHHAERSHYEERKRVVDHARAVAADG
Ga0306920_1009586433	3300032261	Soil	MDEIIIIVGFLAVVCLAWVVWTESKSKQTFDKDTLDQAWRDVLDDSHHAEQRHYEERKRVVDHARAVAADG
Ga0310812_104312391	3300032421	Soil	KLALDKELLEQAWREVLDDPHYMERRHYEERKRVEDQARAAAANR
Ga0335083_101178105	3300032954	Soil	MPHIVIITMLVVVVCIAWVAWTERKSKQALDKDALDQAWREVLDDPHYVERRHYEERKRVEDQARTAAAKR
Ga0335084_114799822	3300033004	Soil	MVELTIILIVVACVAWIVWTVREHKQALREAALDGAWREVLDDPHYVERRHLEERKRVVDKARAAANR
Ga0326726_1001126910	3300033433	Peat Soil	MTEIIIILVVVVCIAWVAWTAQKSKQALEKDALDQAWREVLDDPHYMERQHYEERKRVENQARAAAANR
Ga0326726_100148775	3300033433	Peat Soil	MVAIIIIFTVVVCIAWVVWTERKSKQALDKDALDQAWREVLDDPHHMERRHYEERMRVEDQARAAAANR
Ga0326726_100178183	3300033433	Peat Soil	MVELTIILIVVACVAWVVWTVREHKQALREAALDGAWREVLDDPHYVERRHLEERKRVVDKARAAANR
Ga0326726_100615285	3300033433	Peat Soil	MVELTIIFIVVAFIAWVVWTERKSKLALDKDLLDQAWREVLDDPHYMERRHYEERKRVEDQARAAAANR
Ga0326726_102797352	3300033433	Peat Soil	MIINIIILIVVVCIAWVVWTERKSKQALDKDALDQAWREVLDDPHYIERRHNEERKRVENQARAAAAKH
Ga0326726_119903252	3300033433	Peat Soil	MVELTIILIVVACFAWVVWTVREHKQALREAALDGAWREVLDDPHYVERRHLEERKRVVDKARAAANR
Ga0326726_124803431	3300033433	Peat Soil	MVAIIIIFIVVGCIAWVVWTPRKSKQALDKDALDQAWREVLDDPHYMERRHYEERMRVEDQARAAAANR
Ga0310811_100029227	3300033475	Soil	MLFNIIILFMIASIAWVLWTERKSKQALDKDALDQAWREVPDDPHYIERRHYEERMRIEDEARAAAAKRASVGSSGIGGS
Ga0316624_105678633	3300033486	Soil	MAQILNIIILIVVVGIAWVIWTERKSKQALDKDALEQAWREVPDDPHSVERRHYEERMRVENQARADAAKH
Ga0316628_1002185162	3300033513	Soil	MTELLIILIIVACIAWIVWILWESEQVLKEAVLDDAWREVLDDPHYMERRHLEERKRVVDKARAATANR
Ga0316628_1023977521	3300033513	Soil	MVEIIIILILAACIGWATWTAQKSKQALDKDALDQAWREVLNDPHYMERRHYEERMLVENQARAAAANRSSHGTPHTMKP
Ga0326723_0024571_450_689	3300034090	Peat Soil	MPNAFILIVLLVVVCAAWLVWTERKSKQALDKDALDQAWREVLHDPHYIERRHYEERMRVEEEARTAAAKHAVRAEPNP
Ga0326723_0155739_1_174	3300034090	Peat Soil	MVAIIIIFIVVVCIAWVVWTEQKSKQALDRDALVQAWREVLDDPHYMERRHYEERKRV
Ga0326723_0408134_440_616	3300034090	Peat Soil	MVELTIIFIVVALIAWVVWTERKSKLALDKDLLDEAWREVLDDPHYMERRHYEERKRVE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters