NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F019942

Metagenome / Metatranscriptome Family F019942

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F019942
Family Type Metagenome / Metatranscriptome
Number of Sequences 226
Average Sequence Length 41 residues
Representative Sequence YMIKISGLEHLTASEQLEVLGGLLDVSEGRPRSNQKDVLTT
Number of Associated Samples 113
Number of Associated Scaffolds 226

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.77 %
% of genes near scaffold ends (potentially truncated) 59.73 %
% of genes from short scaffolds (< 2000 bps) 100.00 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (79.646 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(72.124 % of family members)
Environment Ontology (ENVO) Unclassified
(90.708 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(79.646 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.48%    β-sheet: 0.00%    Coil/Unstructured: 56.52%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 226 Family Scaffolds
PF04195Transposase_28 3.98
PF14223Retrotran_gag_2 0.44
PF00078RVT_1 0.44



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A79.65 %
All OrganismsrootAll Organisms20.35 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005618|Ga0068864_100814266Not Available918Open in IMG/M
3300005842|Ga0068858_101194784Not Available747Open in IMG/M
3300005843|Ga0068860_102083341Not Available589Open in IMG/M
3300009092|Ga0105250_10522027Not Available541Open in IMG/M
3300009101|Ga0105247_10571056Not Available834Open in IMG/M
3300009101|Ga0105247_10957061Not Available665Open in IMG/M
3300009971|Ga0105127_10684All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum819Open in IMG/M
3300009975|Ga0105129_102594Not Available907Open in IMG/M
3300009980|Ga0105135_113296Not Available660Open in IMG/M
3300009980|Ga0105135_117193Not Available614Open in IMG/M
3300009980|Ga0105135_121197Not Available575Open in IMG/M
3300009980|Ga0105135_122292Not Available565Open in IMG/M
3300009980|Ga0105135_126824Not Available530Open in IMG/M
3300009980|Ga0105135_127868Not Available523Open in IMG/M
3300009980|Ga0105135_129573Not Available512Open in IMG/M
3300009981|Ga0105133_107376Not Available767Open in IMG/M
3300009989|Ga0105131_121622All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum640Open in IMG/M
3300009990|Ga0105132_141983Not Available517Open in IMG/M
3300009992|Ga0105120_1033900Not Available614Open in IMG/M
3300009994|Ga0105126_1035271Not Available601Open in IMG/M
3300009994|Ga0105126_1037493Not Available588Open in IMG/M
3300009994|Ga0105126_1044429Not Available553Open in IMG/M
3300009994|Ga0105126_1054637Not Available511Open in IMG/M
3300009995|Ga0105139_1010782All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum1186Open in IMG/M
3300009995|Ga0105139_1018677All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae1012Open in IMG/M
3300009995|Ga0105139_1055181Not Available708Open in IMG/M
3300009995|Ga0105139_1076452Not Available627Open in IMG/M
3300010281|Ga0134090_1079959Not Available612Open in IMG/M
3300010371|Ga0134125_12525740Not Available558Open in IMG/M
3300010373|Ga0134128_11967085Not Available644Open in IMG/M
3300010396|Ga0134126_12205254All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum601Open in IMG/M
3300010396|Ga0134126_12490289All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum563Open in IMG/M
3300010396|Ga0134126_12942572Not Available515Open in IMG/M
3300010400|Ga0134122_12899040Not Available533Open in IMG/M
3300012521|Ga0134099_1107324Not Available564Open in IMG/M
3300014326|Ga0157380_11731615Not Available683Open in IMG/M
3300014968|Ga0157379_10873568Not Available852Open in IMG/M
3300014968|Ga0157379_11869201Not Available591Open in IMG/M
3300015270|Ga0182183_1026649All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum744Open in IMG/M
3300015270|Ga0182183_1050671Not Available616Open in IMG/M
3300015270|Ga0182183_1061608Not Available580Open in IMG/M
3300015270|Ga0182183_1085311Not Available521Open in IMG/M
3300015273|Ga0182102_1015990Not Available670Open in IMG/M
3300015278|Ga0182099_1019362All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum727Open in IMG/M
3300015278|Ga0182099_1051655All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum559Open in IMG/M
3300015280|Ga0182100_1068289Not Available575Open in IMG/M
3300015284|Ga0182101_1046335Not Available655Open in IMG/M
3300015290|Ga0182105_1006789Not Available1184Open in IMG/M
3300015290|Ga0182105_1022914Not Available839Open in IMG/M
3300015290|Ga0182105_1075008Not Available575Open in IMG/M
3300015290|Ga0182105_1094042Not Available530Open in IMG/M
3300015293|Ga0182103_1041156Not Available678Open in IMG/M
3300015293|Ga0182103_1072944Not Available567Open in IMG/M
3300015293|Ga0182103_1084421Not Available541Open in IMG/M
3300015293|Ga0182103_1091994Not Available525Open in IMG/M
3300015297|Ga0182104_1045251Not Available708Open in IMG/M
3300015297|Ga0182104_1077875Not Available590Open in IMG/M
3300015301|Ga0182184_1018165Not Available885Open in IMG/M
3300015301|Ga0182184_1062381Not Available595Open in IMG/M
3300015301|Ga0182184_1069489Not Available574Open in IMG/M
3300015306|Ga0182180_1037050Not Available704Open in IMG/M
3300015309|Ga0182098_1095994Not Available559Open in IMG/M
3300015309|Ga0182098_1096917Not Available557Open in IMG/M
3300015310|Ga0182162_1021318All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum932Open in IMG/M
3300015310|Ga0182162_1120839All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum517Open in IMG/M
3300015311|Ga0182182_1016044All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum983Open in IMG/M
3300015311|Ga0182182_1059034Not Available653Open in IMG/M
3300015311|Ga0182182_1077640All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum594Open in IMG/M
3300015311|Ga0182182_1080360Not Available587Open in IMG/M
3300015312|Ga0182168_1017742All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum1019Open in IMG/M
3300015312|Ga0182168_1111399Not Available546Open in IMG/M
3300015313|Ga0182164_1042663Not Available773Open in IMG/M
3300015313|Ga0182164_1044052Not Available765Open in IMG/M
3300015313|Ga0182164_1049814Not Available734Open in IMG/M
3300015313|Ga0182164_1049978All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum733Open in IMG/M
3300015315|Ga0182120_1133574Not Available511Open in IMG/M
3300015316|Ga0182121_1059055Not Available720Open in IMG/M
3300015317|Ga0182136_1070477Not Available655Open in IMG/M
3300015317|Ga0182136_1076872Not Available635Open in IMG/M
3300015317|Ga0182136_1078941Not Available629Open in IMG/M
3300015317|Ga0182136_1137377All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum508Open in IMG/M
3300015317|Ga0182136_1137705All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum507Open in IMG/M
3300015318|Ga0182181_1060763Not Available629Open in IMG/M
3300015318|Ga0182181_1070248Not Available599Open in IMG/M
3300015319|Ga0182130_1126612Not Available519Open in IMG/M
3300015320|Ga0182165_1032168Not Available880Open in IMG/M
3300015325|Ga0182148_1030757Not Available870Open in IMG/M
3300015325|Ga0182148_1125337Not Available534Open in IMG/M
3300015327|Ga0182114_1048482Not Available805Open in IMG/M
3300015327|Ga0182114_1067360Not Available715Open in IMG/M
3300015327|Ga0182114_1068736All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum710Open in IMG/M
3300015327|Ga0182114_1114831Not Available581Open in IMG/M
3300015327|Ga0182114_1135702Not Available542Open in IMG/M
3300015328|Ga0182153_1084897Not Available633Open in IMG/M
3300015328|Ga0182153_1126848Not Available542Open in IMG/M
3300015329|Ga0182135_1075336All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum666Open in IMG/M
3300015329|Ga0182135_1106276Not Available585Open in IMG/M
3300015329|Ga0182135_1151398Not Available507Open in IMG/M
3300015329|Ga0182135_1154264Not Available503Open in IMG/M
3300015330|Ga0182152_1146217Not Available515Open in IMG/M
3300015331|Ga0182131_1061402Not Available722Open in IMG/M
3300015331|Ga0182131_1088291Not Available632Open in IMG/M
3300015331|Ga0182131_1115880Not Available568Open in IMG/M
3300015331|Ga0182131_1143168All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum521Open in IMG/M
3300015331|Ga0182131_1147809Not Available514Open in IMG/M
3300015332|Ga0182117_1014472All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae1236Open in IMG/M
3300015333|Ga0182147_1037070All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum897Open in IMG/M
3300015333|Ga0182147_1076727Not Available693Open in IMG/M
3300015333|Ga0182147_1106849Not Available609Open in IMG/M
3300015333|Ga0182147_1110293Not Available602Open in IMG/M
3300015333|Ga0182147_1138597Not Available547Open in IMG/M
3300015333|Ga0182147_1150309Not Available529Open in IMG/M
3300015334|Ga0182132_1045553All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum840Open in IMG/M
3300015334|Ga0182132_1119298Not Available584Open in IMG/M
3300015334|Ga0182132_1144509Not Available538Open in IMG/M
3300015335|Ga0182116_1033103Not Available976Open in IMG/M
3300015335|Ga0182116_1133944Not Available573Open in IMG/M
3300015336|Ga0182150_1021044All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum1050Open in IMG/M
3300015336|Ga0182150_1118930All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum577Open in IMG/M
3300015337|Ga0182151_1035164Not Available895Open in IMG/M
3300015337|Ga0182151_1088937Not Available646Open in IMG/M
3300015337|Ga0182151_1149957Not Available525Open in IMG/M
3300015337|Ga0182151_1159067Not Available512Open in IMG/M
3300015338|Ga0182137_1171553Not Available512Open in IMG/M
3300015339|Ga0182149_1099913Not Available634Open in IMG/M
3300015339|Ga0182149_1175583Not Available500Open in IMG/M
3300015340|Ga0182133_1128178Not Available600Open in IMG/M
3300015340|Ga0182133_1141134Not Available576Open in IMG/M
3300015348|Ga0182115_1147052Not Available754Open in IMG/M
3300015348|Ga0182115_1161461All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum718Open in IMG/M
3300015348|Ga0182115_1203389Not Available634Open in IMG/M
3300015348|Ga0182115_1258599Not Available553Open in IMG/M
3300015348|Ga0182115_1296584Not Available510Open in IMG/M
3300015349|Ga0182185_1100376Not Available831Open in IMG/M
3300015349|Ga0182185_1161399Not Available670Open in IMG/M
3300015349|Ga0182185_1197287All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum608Open in IMG/M
3300015349|Ga0182185_1232141Not Available561Open in IMG/M
3300015349|Ga0182185_1237700Not Available554Open in IMG/M
3300015349|Ga0182185_1245140Not Available545Open in IMG/M
3300015349|Ga0182185_1251585Not Available538Open in IMG/M
3300015350|Ga0182163_1074633All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum999Open in IMG/M
3300015352|Ga0182169_1171524Not Available709Open in IMG/M
3300015352|Ga0182169_1239459Not Available591Open in IMG/M
3300015352|Ga0182169_1246552All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum581Open in IMG/M
3300015352|Ga0182169_1268030Not Available554Open in IMG/M
3300015353|Ga0182179_1187043Not Available656Open in IMG/M
3300015353|Ga0182179_1205860Not Available627Open in IMG/M
3300015354|Ga0182167_1051508All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum1414Open in IMG/M
3300015354|Ga0182167_1182073Not Available772Open in IMG/M
3300015354|Ga0182167_1188213Not Available757Open in IMG/M
3300015354|Ga0182167_1208267All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum714Open in IMG/M
3300015354|Ga0182167_1261354Not Available622Open in IMG/M
3300015354|Ga0182167_1291829Not Available580Open in IMG/M
3300015354|Ga0182167_1356939Not Available510Open in IMG/M
3300015354|Ga0182167_1358445Not Available508Open in IMG/M
3300017408|Ga0182197_1106507All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum576Open in IMG/M
3300017408|Ga0182197_1109966All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum569Open in IMG/M
3300017408|Ga0182197_1125048Not Available541Open in IMG/M
3300017408|Ga0182197_1134867Not Available526Open in IMG/M
3300017408|Ga0182197_1145000Not Available511Open in IMG/M
3300017412|Ga0182199_1098726Not Available669Open in IMG/M
3300017412|Ga0182199_1139949Not Available585Open in IMG/M
3300017412|Ga0182199_1161062Not Available554Open in IMG/M
3300017414|Ga0182195_1080348Not Available750Open in IMG/M
3300017414|Ga0182195_1171868Not Available559Open in IMG/M
3300017421|Ga0182213_1244182Not Available515Open in IMG/M
3300017422|Ga0182201_1057867Not Available689Open in IMG/M
3300017422|Ga0182201_1068137Not Available652Open in IMG/M
3300017422|Ga0182201_1110073Not Available554Open in IMG/M
3300017432|Ga0182196_1043957Not Available776Open in IMG/M
3300017435|Ga0182194_1066704Not Available687Open in IMG/M
3300017445|Ga0182198_1021187Not Available1123Open in IMG/M
3300017446|Ga0182217_1065125Not Available848Open in IMG/M
3300017446|Ga0182217_1107117Not Available656Open in IMG/M
3300017691|Ga0182212_1162549Not Available510Open in IMG/M
3300017693|Ga0182216_1129443Not Available627Open in IMG/M
3300017693|Ga0182216_1138148All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum611Open in IMG/M
3300017694|Ga0182211_1121263Not Available617Open in IMG/M
3300020033|Ga0182146_104736Not Available562Open in IMG/M
3300025315|Ga0207697_10360475Not Available646Open in IMG/M
3300025885|Ga0207653_10059655All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum1284Open in IMG/M
3300025918|Ga0207662_10433869Not Available896Open in IMG/M
3300025925|Ga0207650_10409834Not Available1123Open in IMG/M
3300026088|Ga0207641_11869854Not Available602Open in IMG/M
3300026095|Ga0207676_12266005Not Available541Open in IMG/M
3300028049|Ga0268322_1039596Not Available570Open in IMG/M
3300028050|Ga0268328_1053119Not Available563Open in IMG/M
3300028051|Ga0268344_1013819All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum614Open in IMG/M
3300028053|Ga0268346_1014016Not Available721Open in IMG/M
3300028053|Ga0268346_1021295Not Available637Open in IMG/M
3300028054|Ga0268306_1030644All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum527Open in IMG/M
3300028058|Ga0268332_1017136Not Available849Open in IMG/M
3300028058|Ga0268332_1035019Not Available676Open in IMG/M
3300028058|Ga0268332_1038893Not Available653Open in IMG/M
3300028061|Ga0268314_1032290All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta607Open in IMG/M
3300028061|Ga0268314_1044929Not Available539Open in IMG/M
3300028064|Ga0268340_1057269Not Available588Open in IMG/M
3300028064|Ga0268340_1086256Not Available503Open in IMG/M
3300028262|Ga0268310_1046141Not Available525Open in IMG/M
3300028379|Ga0268266_11496398All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum651Open in IMG/M
3300028473|Ga0268319_1014352Not Available594Open in IMG/M
3300028473|Ga0268319_1020734All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum530Open in IMG/M
3300028526|Ga0268339_1010146Not Available621Open in IMG/M
3300028527|Ga0268335_1018140Not Available510Open in IMG/M
3300032465|Ga0214493_1071931All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum823Open in IMG/M
3300032469|Ga0214491_1138322Not Available573Open in IMG/M
3300032502|Ga0214490_1112105Not Available622Open in IMG/M
3300032551|Ga0321339_1123132Not Available581Open in IMG/M
3300032551|Ga0321339_1155859All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum500Open in IMG/M
3300032625|Ga0214501_1178692Not Available676Open in IMG/M
3300032689|Ga0214497_1109810Not Available593Open in IMG/M
3300032821|Ga0314719_1036119Not Available610Open in IMG/M
3300032821|Ga0314719_1045922Not Available530Open in IMG/M
3300032823|Ga0314723_1046505Not Available832Open in IMG/M
3300032890|Ga0314747_1009878All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum1380Open in IMG/M
3300032916|Ga0314734_1083557Not Available638Open in IMG/M
3300032976|Ga0314752_1078491All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum634Open in IMG/M
3300032976|Ga0314752_1115030Not Available516Open in IMG/M
3300033523|Ga0314768_1359428Not Available506Open in IMG/M
3300033530|Ga0314760_1111286Not Available675Open in IMG/M
3300033530|Ga0314760_1156768Not Available555Open in IMG/M
3300033533|Ga0314770_1232682Not Available577Open in IMG/M
3300033534|Ga0314757_1054607All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae955Open in IMG/M
3300033538|Ga0314755_1063749Not Available928Open in IMG/M
3300033538|Ga0314755_1158569All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum576Open in IMG/M
3300033542|Ga0314769_1285243Not Available554Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere72.12%
Switchgrass AssociatedHost-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated9.29%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere7.96%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.21%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.33%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.44%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.44%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.44%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.89%
Switchgrass DegradingEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009971Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_174 metaGHost-AssociatedOpen in IMG/M
3300009975Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaGHost-AssociatedOpen in IMG/M
3300009980Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaGHost-AssociatedOpen in IMG/M
3300009981Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaGHost-AssociatedOpen in IMG/M
3300009989Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaGHost-AssociatedOpen in IMG/M
3300009990Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaGHost-AssociatedOpen in IMG/M
3300009992Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaGHost-AssociatedOpen in IMG/M
3300009994Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaGHost-AssociatedOpen in IMG/M
3300009995Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaGHost-AssociatedOpen in IMG/M
3300010281Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 1_4_20_6_A1 metaGEngineeredOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012521Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 10_41_5_180_A2 metaGEngineeredOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015270Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015273Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015278Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015280Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015284Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015290Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015293Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015297Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015301Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015306Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015309Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015310Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015311Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015312Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015313Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015315Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015316Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015317Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015318Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015319Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015320Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015325Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015327Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015328Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015329Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015330Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015331Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015332Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015333Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015334Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015335Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015336Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015337Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015338Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015339Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015340Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015349Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015350Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015352Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015353Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015354Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017408Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017412Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017414Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017421Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017422Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017432Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017435Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017445Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017446Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017691Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017693Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017694Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300020033Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12JUL2016_LD2 MGHost-AssociatedOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028049Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028050Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028051Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028053Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028054Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028058Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028061Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028064Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028262Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028473Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028526Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028527Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300032465Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032469Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032502Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032551Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032625Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032689Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032821Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_15MAY2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032823Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_05JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032890Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032916Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032976Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033523Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_18SEP2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033530Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033533Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_18SEP2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033534Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033538Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033542Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_18SEP2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0068864_10081426623300005618Switchgrass RhizosphereYMIKISGLEHLTASKQTEVLEGPLDVSEGRTRSNQKDVLST*
Ga0068858_10119478413300005842Switchgrass RhizosphereMIKISGLEHLTASKQMEVLEGLLDVSEGRIRSNQKDVLTT*
Ga0068860_10208334113300005843Switchgrass RhizosphereMIKISGFEHLTTLKKPQVLGRLVDVLEGRTRSNQKDVLTT*
Ga0105250_1052202713300009092Switchgrass RhizosphereLEHLTASKQPEVLGRLLEAFDGRLRSTQKDVQSTRST*
Ga0105247_1057105613300009101Switchgrass RhizosphereMIKISGLEHLTVSKQTEVLEGLLDVFEGRTRSNQKDVLNT*
Ga0105247_1095706123300009101Switchgrass RhizosphereMIKISGLEHLTASKLTEVLEGLLDVFEGRTRSNQKDVL
Ga0105127_1068413300009971Switchgrass AssociatedMIKILGLEHLTASKKPEVLGGLLDVTEERPRSNLKDVLTT*
Ga0105129_10259413300009975Switchgrass AssociatedMIKISGLEHLTASEQPEVLGGLLDEFEGRPRRNQKDVLTT*
Ga0105135_11329613300009980Switchgrass AssociatedMIKILGLEHLTASEQPEVLGRLLDVFEGRHRSNQKDVLTA*
Ga0105135_11719313300009980Switchgrass AssociatedMIKILGLEHLTASEQPQLLGGLLDASEGRPRNNQKDVLTT*
Ga0105135_12119713300009980Switchgrass AssociatedLRAPYMIKISGLQHLTASEQPEVFGGLLDESEGRPGSNQKDVLTT*
Ga0105135_12229213300009980Switchgrass AssociatedLEHLTVLEQPEVLGGLLDVPEGRTRSNQKDVLTT*
Ga0105135_12682413300009980Switchgrass AssociatedVYMIKISGLEHLIASEQPEVLGRLLDVLEGRPRSNHKDVRTT*
Ga0105135_12786813300009980Switchgrass AssociatedMIKISGLEHLTASKQLDEFGRLLDVLEERPRSNQKDVLT
Ga0105135_12957313300009980Switchgrass AssociatedMIKISELEHLTASKQPEVLGGLLDVSEGRLRNNQEDVLTT*
Ga0105133_10737613300009981Switchgrass AssociatedMIKISGLEHLTASEQPQVLGGLLGASEGRPRSNRKGVLTTRS
Ga0105131_12162213300009989Switchgrass AssociatedMIKISGLEHLTASKQMEVLEGLLDVFEGRTRSNQKDVLTA*
Ga0105132_14198313300009990Switchgrass AssociatedATPYGVRVLRAPYMIEISGLEHLTASKQPEVLGGLLGVSEGRPRSHQKDVLTT*
Ga0105120_103390013300009992Switchgrass AssociatedLVLRAPYMIKISGLEHLTASKQTGVLGGLLDEVEGRSRSSLKDILTN*
Ga0105126_103527113300009994Switchgrass AssociatedMIKISGLEHLTASKQPQVLGGLLDVSEGRFRNNEEDILIT*
Ga0105126_103749323300009994Switchgrass AssociatedMIKILGHEHLTASEQPEVRGRLLEVLEGRPGSNQMDVL
Ga0105126_104442913300009994Switchgrass AssociatedVPYMIKNSELEHLTASKQPEVLGELLGVSEGMPRSNQKDVLTT*
Ga0105126_105463713300009994Switchgrass AssociatedMEREYFEHLTASEQPEELGRLLNVLKGRPRSNQKDVLTT*
Ga0105139_101078223300009995Switchgrass AssociatedMIKISRLEHLTASGHPEVLGRLLDVPEGRPRSNQKDVLTT*
Ga0105139_101867723300009995Switchgrass AssociatedMIKISELEHLTASEQPEELGRLLDVSEGRPRSNQKDVLTT*
Ga0105139_105518123300009995Switchgrass AssociatedMIKISRLEHLTASKKTEVLEGLLDISEGRVRSNQKDVLTT
Ga0105139_107645213300009995Switchgrass AssociatedLRAPYIIKISGLEHLTTLKQLEVLEGLLDVSEGRTRSNHEEVLNT*
Ga0134090_107995913300010281Switchgrass DegradingMIKISGLEHLTASKQMEVLEGLLDISERRVRSKQDVLT
Ga0134125_1252574023300010371Terrestrial SoilMIKISGHEHLTASEQPEALGRLLDVLEGRPRSNQEEILII*
Ga0134128_1196708513300010373Terrestrial SoilKISGLEHLTASKQMEVLGGLLDIPGGRPRSSQKDILTT*
Ga0134126_1220525423300010396Terrestrial SoilMIKISGLEHLTASEQPEVLEGLLDVFEGRPRSNQEDALTT*
Ga0134126_1249028913300010396Terrestrial SoilLRAPYMIKISGFEHLTVSKQPQVLKELLNIPEGRPRSNQKDVQTT*
Ga0134126_1294257213300010396Terrestrial SoilMIKILGLEHLTALEQPEVLGGLLDVSDGRPRSNEKDVLTT*
Ga0134122_1289904013300010400Terrestrial SoilMIKMSGLEHLTASKQMEVFEGLLDVSEERTRRNQKDVLTI
Ga0134099_110732423300012521Switchgrass DegradingMIKISGLEHLTASEQPKVLGGLLDVSEGKPRSNQKDVLTT*
Ga0157380_1173161523300014326Switchgrass RhizosphereMIKISGLENLTASKQMGVLEGLLDVSEGRTRSNQKDVLTT*
Ga0157379_1087356813300014968Switchgrass RhizosphereMIKISGLEHLTASKQTEVLEGLLDVFEGRTRSNQKDVLT
Ga0157379_1186920113300014968Switchgrass RhizospherePYGARILHAPYMIKISRLEHLTASKQPEVLGGLLDVFEGRPRRMF*
Ga0182183_102664913300015270Switchgrass PhyllosphereMIKILGLEHLAASKQTEVLEGLLDVSEGRTRSNQKDVLTT
Ga0182183_105067113300015270Switchgrass PhyllosphereLRAPYKIKISGLEHLTASKQPGELGRLLDVLKGRPRGNQKDVLTI*
Ga0182183_106160813300015270Switchgrass PhyllosphereMIKISGLEHLIVSKQLEELGRLLDVLEGRPRSNQKDVLTT*
Ga0182183_108531113300015270Switchgrass PhyllosphereMIKISGLEHLTASKQMEVLEALLDVPEGRTRSNRKDVLTTRNTQRR
Ga0182102_101599023300015273Switchgrass PhyllosphereATPYRARVLRAPYMLKISGYEHLTASKQPEVPGGLLDVFEGRHRNNQGQE*
Ga0182099_101936223300015278Switchgrass PhyllosphereMIKISGLEHLTASRQPEVLGGLLDVSEGRTRSNQEEVLIT*
Ga0182099_105165513300015278Switchgrass PhyllosphereMIKISGLEHLTASEQPEVLGGLLDESEGRPRINQKIF*
Ga0182100_106828923300015280Switchgrass PhyllosphereMIKILGLEHLTALEQPEVLERLLDVLHGRPRSNQRDVLTT*
Ga0182101_104633513300015284Switchgrass PhyllosphereMIKNSGLEHLIASEQPEELGRLLDVLEGRPRNNQKDVLIT*
Ga0182105_100678923300015290Switchgrass PhyllosphereMIKISELEHLIASKQPEVLEELLDVSEGRPRSNQEDVLTT*
Ga0182105_102291413300015290Switchgrass PhyllosphereMIKISGLEHLTASKQTEVLEGLLDVYEGRVRSNRK
Ga0182105_107500813300015290Switchgrass PhyllosphereARVLRALYMIKISGLEHLTASKQSEVLEELLDVSKGRTRSNKKDVLTT*
Ga0182105_109404213300015290Switchgrass PhyllosphereMIKISGLEHLTASKQTEELEGLLDVSEGRTKSNQKDVLTT*
Ga0182103_104115633300015293Switchgrass PhyllosphereMINILGLEHLTASKQTEVLEGLLDVSEGRVRSNQKDVL
Ga0182103_107294413300015293Switchgrass PhyllosphereMIKISRLEHLTASKQMEVLEELLDVSEGRTRRMF*
Ga0182103_108442123300015293Switchgrass PhyllosphereIKISGLEHLTASEQPEVHGGLLDVSEGRLRSNRKGVLTT*
Ga0182103_109199413300015293Switchgrass PhyllosphereYGARVLRAPYINKNSGLEHLTASEQLEELGRLLNVLEGRPRSNQKDVLTI*
Ga0182104_104525113300015297Switchgrass PhyllosphereMIKISGHEHLTASEQPEELGKLLAVLE*RSRGNHKDVLTT
Ga0182104_107787513300015297Switchgrass PhyllosphereGARVLHAPYMIKISRLEHLTTSEQPEVLGGLLDISEERPRSNQKDVLTT*
Ga0182184_101816513300015301Switchgrass PhyllosphereMIKISGLEHLTASKQPQVLEELLDVPVGRPRSDQKDVQVT*
Ga0182184_106238113300015301Switchgrass PhyllosphereGARVLRTPYMIKISGLEHLTASEQPEVLGGLLDISEGRPRSNQKDVLTT*
Ga0182184_106948913300015301Switchgrass PhyllosphereMIKISGLEHLTASKQTEVLEGLLNVSEGRVRSNQKDILTTRRT
Ga0182180_103705023300015306Switchgrass PhyllosphereGLEHLTASKQPEVLGGLLDVSEGRPRGNQKHVLTT*
Ga0182098_109599413300015309Switchgrass PhyllospherePYGARVLCAPYMIKISRLEHLTVSEKLEVLGRLLDVSKGRPRSNQKDVLTT*
Ga0182098_109691713300015309Switchgrass PhyllosphereIKISGLEHLTASKQPEVLGGLLDVSEGRPRGNQKHVLTT*
Ga0182162_102131813300015310Switchgrass PhyllosphereYGTRVLHAPYMIKISGLEHLTASEQLEVLGGILDVSEGRIRSNQEDVLTT*
Ga0182162_112083913300015310Switchgrass PhyllosphereLRAPYMIKISGLEHLTASKQTEVLEGLLNVSKGRTRSNQEEVLIT*
Ga0182182_101604413300015311Switchgrass PhyllosphereMIKISGLEHLTASEQPEVLGGLLDVSEGRPKSDLEDILT
Ga0182182_105903413300015311Switchgrass PhyllosphereIKISVLEHLTASKQLQVLGGLLDVFEGRLRSSQKKVLTT*
Ga0182182_107764013300015311Switchgrass PhyllosphereATPYGARVLRAPYMIKISGLEHLTASKQPEVLGRLLDVSEERPRSNQKYFLTT*
Ga0182182_108036013300015311Switchgrass PhyllosphereGARVLRAPYMIKILGLEHLTASKQTEVLEGLLDVTEGRTRSNQKDVLTT*
Ga0182168_101774213300015312Switchgrass PhyllosphereMIKISGLEHLTASKQTEVLEGLLDVYEGRTRRNQEEVLII*
Ga0182168_111139913300015312Switchgrass PhyllosphereMIKISGLEHLTASKQPEVLGELLDVSEGRLRNNQEDVLTT*
Ga0182164_104266323300015313Switchgrass PhyllosphereMIKISGLEHLTALKQPEVLGGLLDVSEGRPRSNHKDVLTT*
Ga0182164_104405223300015313Switchgrass PhyllosphereMIKISELEHLTASKQPEELGRLLDVLEGRPRSNQKDVRTT*
Ga0182164_104981423300015313Switchgrass PhyllosphereMIKISGLEHLTASEQLEVLGGLLDVPEGRPRSNQKDV*
Ga0182164_104997813300015313Switchgrass PhyllosphereMIKISGLEHLTVSEHPEVLGRLLDVPEGRPRNNQKDVLIT*
Ga0182120_113357413300015315Switchgrass PhyllosphereMIKILGLEHLTASEQPEVLEGLLDVSKGRPRSNQKDVLTV*
Ga0182121_105905523300015316Switchgrass PhyllosphereMIKILGLEHLIASKQMEVLERLLDIPGGRPRSSQKDILTT*
Ga0182136_107047713300015317Switchgrass PhyllosphereMIKILGFEHLTASKQPEVLEGLLDVSKGRLRNNREDVL
Ga0182136_107687223300015317Switchgrass PhyllosphereMIKILGLEHLTALDQPEVLGGLLDVSEGRLRNNQEDVLTT*
Ga0182136_107894123300015317Switchgrass PhyllosphereMIKNSGLEHLIASEQPEELGRLLDVLEGRPRNNQK
Ga0182136_113737713300015317Switchgrass PhyllosphereLRAPYMTKISGLEHLTALEQPEVLGGLLDVPEENNQKDDPTT*
Ga0182136_113770513300015317Switchgrass PhyllosphereMIKISGLEHLTASEQPEVLGGLLDVSEGSPRSNQKDVLTI
Ga0182181_106076323300015318Switchgrass PhyllosphereMIKISGLEHLTASKQMGVLGGLLDEVEGRSKSNQKDVLTI*
Ga0182181_107024813300015318Switchgrass PhyllosphereMIKISGLEHLTASEQPEIYGGLLDVSEGRLRRCSDCMKY
Ga0182130_112661213300015319Switchgrass PhyllosphereGLEHLTASKQSEVLGELLDVPEGRTRSNLTDVPTT*
Ga0182165_103216823300015320Switchgrass PhyllosphereMIKISGLEHLTASKQPEVLGGLLDVSEGRPRSNQKDVQIT*
Ga0182148_103075723300015325Switchgrass PhyllosphereMLKISEHDHLTASKQPEVPGGLLDVSEERLRNNQEEVLIT*
Ga0182148_112533723300015325Switchgrass PhyllosphereMIKISGLEHLTASEQPEVLAGLLDKSEGRPRINQKIF*
Ga0182114_104848223300015327Switchgrass PhyllosphereMIKISGLEHLTGSKQSEVLGRLLDVSEERPRSNQKDVL
Ga0182114_106736013300015327Switchgrass PhyllosphereMIKISGLEHLTASEQPEVLGRLLDVSERRPRSNQK
Ga0182114_106873613300015327Switchgrass PhyllosphereMIKISGLEHLTVSKQMEVLEGLLDISEGRTRSNQEEVLIT*
Ga0182114_111483113300015327Switchgrass PhyllosphereQVLRAPYMIKISGLEHLIASKQPEVLGGLLDVFEGRPRSNQKDVLTT*
Ga0182114_113570223300015327Switchgrass PhyllosphereMIKISGLEHLTASELPEVIGRLLDVSEGRPRSNQRDVLTI*
Ga0182153_108489713300015328Switchgrass PhyllosphereKISRLEHLTASEQPKVLGGLLDVSEGRPRSNQKDVLTT*
Ga0182153_112684813300015328Switchgrass PhyllosphereMIKISGIEHLTASMQMEVLEGLIDVSEGRTRSNQKDVL
Ga0182135_107533613300015329Switchgrass PhyllosphereMIKISGLEHLAASEQPKVLGGLLDVFEGKPRSNQKDV
Ga0182135_110627623300015329Switchgrass PhyllosphereMFKISGLEHLTASKQPEVLGGLLDVSKKKTKSNQKDVLIT*
Ga0182135_115139813300015329Switchgrass PhyllosphereMIKILGLEHLTASKQPEVLGGLLDVSEGRFRNNQEDVLTT*
Ga0182135_115426423300015329Switchgrass PhyllosphereMIKILGLEHLTASKQPEVLGRLLDVSEGKPRNNQKDVLTT*
Ga0182152_114621713300015330Switchgrass PhyllosphereMIKISGHEHLIASEQPEELGGLLDILEGRLRSNQKDVLTT*
Ga0182131_106140213300015331Switchgrass PhyllosphereMIRISGLEHLTALEQPEVLEGLLDVSEGRPRSNQKDVLTT
Ga0182131_108829113300015331Switchgrass PhyllosphereMIKISGLEHLTASEQLEELGRLLDVLEGRPRSNQKDVLTT*
Ga0182131_111588013300015331Switchgrass PhyllosphereCDSTYGSGATSYGARVLRALYMIRISGLEHLTASKQLEVLEGLLDVSEGRSRSNPE*
Ga0182131_114316823300015331Switchgrass PhyllosphereMIKISGLEHLTASKQPEVLRGLLDVSKKKTKSNQKDVLIT*
Ga0182131_114780923300015331Switchgrass PhyllosphereMIKISGLEHLTASKQMEVLEGLLDISEERTRSNQKDVLTT*
Ga0182117_101447223300015332Switchgrass PhyllosphereMIKISELEHLIVSKQPEVLEGLLDVSKGRPRSSQKDVLTT
Ga0182147_103707013300015333Switchgrass PhyllosphereMIKISALEHLIASKQPKILGGLLDISEGRPKSNRK
Ga0182147_107672713300015333Switchgrass PhyllosphereMIKISGLEHHTASEQPKVLGGLLYMSEGRRRSNQK
Ga0182147_110684913300015333Switchgrass PhyllospherePYMIKISELEHLTASEQLEEVGRLLDVLKGRPRSNQKDVLTT*
Ga0182147_111029313300015333Switchgrass PhyllosphereKISGLEHLTASEQPEVLGILLDVFRGRPRSNQKY*
Ga0182147_113859713300015333Switchgrass PhyllosphereMIKISGLEHLTALKQMEVLGGLLDEAGGRTRSNQKDILTT*
Ga0182147_115030913300015333Switchgrass PhyllosphereILGHEHLTASVQPGVLGRLLEVFEGRLRSNQKDVLTT*
Ga0182132_104555313300015334Switchgrass PhyllosphereMIKISGLEHLTTSEQMEVLGGQLDVSEGRIRCNQNN
Ga0182132_111929813300015334Switchgrass PhyllosphereTPYGARVLRAPYMIKISGLEHLTASEQPGVLGGLLDVFEGRPRSNQKDVLTT*
Ga0182132_114450913300015334Switchgrass PhyllosphereMIKISGLEHLTASKQTEVLEGLLDVSEGRTRSNQKDV
Ga0182116_103310323300015335Switchgrass PhyllosphereMIKISGLEHLTASEQPEVLGGLLDVSEGRPKSDPE
Ga0182116_113394413300015335Switchgrass PhyllosphereMIKILGLEHLTASKQPEVLGGLLDVFEGKPGSNQKDVLTT*
Ga0182150_102104433300015336Switchgrass PhyllosphereAPYMIKISWLEHLTASKQTEVLEGLLDIFEGRTRSNQKDVLTT*
Ga0182150_111893023300015336Switchgrass PhyllosphereMIKISGLEHLTASKQMEVLEGLLDVFEGRTRSNQKDVLTT*
Ga0182151_103516423300015337Switchgrass PhyllosphereMIKISGLEHLTASKQMEVLGGLLDIPGGRPRSSQKDILTT*
Ga0182151_108893713300015337Switchgrass PhyllosphereGATPYGARVLPAPYIIKIPGLEHLTTSEQPEVLGGLLDVSEGRPRSNQKDVQIT*
Ga0182151_114995723300015337Switchgrass PhyllosphereMIKISGLEHLTALKKPQVLEELLDVPEGRPRSKQKDVQTT*
Ga0182151_115906713300015337Switchgrass PhyllosphereGATPYGARVLRAPYMIKISGLEHLTASKQPEVLGGLLDMSEGRPISN*
Ga0182137_117155313300015338Switchgrass PhyllosphereMIKILGLEHLTALKQTEVLEGLLDVTEGITNSNQKEILDN*
Ga0182149_109991313300015339Switchgrass PhyllosphereIIKISGLEHLTALEQLEVLGRLLDVFEGRPKSSLKDVLTT*
Ga0182149_117558313300015339Switchgrass PhyllosphereMIKISGLEHLIASKQPKVLGRLLDVPKGKLGSDQKDVLTT*
Ga0182133_112817813300015340Switchgrass PhyllosphereMIKNLGLVHLTASKQPEELVRLLDVLEERPRRNQKDVLTT*
Ga0182133_114113413300015340Switchgrass PhyllosphereYMIKILGYEHLKASEQPEVLGGLLDVPKRKLRSNQKDILTT*
Ga0182115_114705213300015348Switchgrass PhyllosphereARVLRAPYMIKILGLEYLTASEQTEVLGRLLDVLKGRPRSDQKHILTT*
Ga0182115_116146123300015348Switchgrass PhyllosphereMIKISGLEHLTASEQPEELRGLLDVSEGRQEATRRMF*
Ga0182115_120338913300015348Switchgrass PhyllosphereMIKISGLEHLTASEQLEVLGGLLDVSEGRPKSDLEDILTT*
Ga0182115_125859913300015348Switchgrass PhyllosphereYMIKISGLEHLTASEQLEVLGGLLDVSEGRPRSNQKDVLTT*
Ga0182115_129658413300015348Switchgrass PhyllosphereRVLHASYMIKISGLEHLTASKQLKEHGRLLDVLEGRPRSSQKDVLTT*
Ga0182185_110037623300015349Switchgrass PhyllosphereMIRISGIEHLTASKQLEVLEGPLDISEGRSRRKQKDI
Ga0182185_116139913300015349Switchgrass PhyllosphereMIKISGLEHLTTLKQLEVLGRLLDVLEGRTRSNQKDVRTT*
Ga0182185_119728723300015349Switchgrass PhyllosphereMIRISGLEHLTASKKPEVLEGLLDVSEGRPRINQKDVLTT*
Ga0182185_123214113300015349Switchgrass PhyllosphereLVLRTPYMIKISGLEHLTASKQMEVLEGLLDVSEGRTRSNQVDVLST*
Ga0182185_123770013300015349Switchgrass PhyllosphereMIKISGLEHLTTSKQMEVLGGLLDVSEGRIRCNQNNV
Ga0182185_124514013300015349Switchgrass PhyllosphereMIKISELEHLTASKQPEVLGGLLDELEGRPRSNQ*
Ga0182185_125158523300015349Switchgrass PhyllosphereMIKILGLEHLTASKQTEVLEGLLDVFEGRIRSNQKDVLTT*
Ga0182163_107463313300015350Switchgrass PhyllosphereMIKNLGLVHLTASKQPEELGRLLDVLEERPRRNQKDVLTT*
Ga0182169_117152413300015352Switchgrass PhyllosphereMIKISELEYLTASKQPEVLGGLLDELEGRPRSNQK
Ga0182169_123945913300015352Switchgrass PhyllosphereTPYGARVLRAPYMIKISGLEHLTASEQTEVLEGLLDVSEGRTRSNQKDVLIT*
Ga0182169_124655213300015352Switchgrass PhyllosphereLRAPYMIKISGLEHLIASEQPGVLGRLLDVSEGRPRSNQKNIQTT*
Ga0182169_126803013300015352Switchgrass PhyllosphereAPYMIKISGLEHLTASKQPEVIGGLLDVSEERTRSNQKDILNT*
Ga0182179_118704323300015353Switchgrass PhyllosphereMIKISELEHLTTSMLMEVLEELLDVSEGRTRSNQEEVLII*
Ga0182179_120586023300015353Switchgrass PhyllosphereVLCAPYMIKISGLEHLTASEQSEVLGGLLDISEGRPRSNQKDVLTT*
Ga0182167_105150833300015354Switchgrass PhyllosphereMIKISGLEHLTASELPEVIGRLLDVSEGRPRSNQKDVLTI*
Ga0182167_118207323300015354Switchgrass PhyllosphereMIEISGLEHLIASEQPQVLGRLFYVLEGRPRSNQKDVQTTGSTRR
Ga0182167_118821323300015354Switchgrass PhyllosphereAPYMIKISGLEHLTASKKTEVLEGLLDIFEGRTRRNQKDVLTT*
Ga0182167_120826723300015354Switchgrass PhyllosphereVLRAPYMNKISGLEHLTTSEQTEELGGLIDVSKGRTRSNQKDVLTT*
Ga0182167_126135413300015354Switchgrass PhyllosphereMIKISGLEHLTVSEQLGVLGRLLDVFEGRPRSNQKNIQTT*
Ga0182167_129182913300015354Switchgrass PhyllosphereIKISGLEHLTASKQPEVLGGLLDVSKRKTRSNQKDVLIT*
Ga0182167_135693913300015354Switchgrass PhyllosphereMIKNLGLVHLTASKQPEELGRLLDVLKERPRRNQKDVLTT*
Ga0182167_135844513300015354Switchgrass PhyllosphereMIKISGLEHLTALKQPEVFGGLLDVSEGRTRSNQKDVLIT*
Ga0182197_110650713300017408Switchgrass PhyllosphereMIKNSGLEHLTASEQPEVLGILLDVSKRRPRSNQKDVLTA
Ga0182197_110996613300017408Switchgrass PhyllosphereIKISGLEHLTASEQPEVLGGLLDVPEGRTRSILKKVLTT
Ga0182197_112504813300017408Switchgrass PhyllosphereVRVLRAPYMIKILGLEHLTASEQPQVLGGLLDASEGRLRSNQKDVLIT
Ga0182197_113486713300017408Switchgrass PhyllosphereMNKISGLEHLTASRQPEVLGRLLDVLEGKPRSNQKDVLTT
Ga0182197_114500013300017408Switchgrass PhyllosphereGLEHLTASKKPEVPGGLLDVSEGRPGSDQKDVLTT
Ga0182199_109872613300017412Switchgrass PhyllosphereMIKILGHEHLIASEQLEVLGRLLKVFDRRPRSNQKDVLHTLST
Ga0182199_113994913300017412Switchgrass PhyllosphereMIKNLGLVHLTVSKQPEELGRLLDVLEERPRRNQKDVLTT
Ga0182199_116106213300017412Switchgrass PhyllosphereIKISGLEHLTASKQTEVLEGLLDVSEGRTRSNRKDVLTT
Ga0182195_108034823300017414Switchgrass PhyllosphereMIKISGLEHLTTSKQMEVLEGLLDVSEGRTRSNQVDVLTA
Ga0182195_117186813300017414Switchgrass PhyllosphereVLRAPYMIKISGLEHLTASEQLQVLGRLLDVLEGRLRSNEKDVHTA
Ga0182213_124418213300017421Switchgrass PhyllosphereMIKISGLEHLTALKQPEVLGGLLDVSEGRLISNQKDVLTT
Ga0182201_105786723300017422Switchgrass PhyllosphereMIKISGLEHLTASEQPEVLGRLLDVLEGRPRSNQKD
Ga0182201_106813713300017422Switchgrass PhyllosphereMIKISVLEHLTASGQPEELGRLLDVLEGRPRNNQKDVLTT
Ga0182201_111007313300017422Switchgrass PhyllosphereMNKISGLEHLTASEQPEVLGRLLEVLEGRPGSNQMDVLTT
Ga0182196_104395723300017432Switchgrass PhyllosphereMIKSSGLEHLTALKQTEVLGGLLDEVAGRSRSNQKDVLTT
Ga0182194_106670413300017435Switchgrass PhyllosphereYGARVLRAPYMIQISGLEHLTASKQPEVLGGLLDVLEGRTRSNLKDVLTT
Ga0182198_102118713300017445Switchgrass PhyllosphereMIKNSGLEHLIASEQPEELGRLLDVLEGRHRNNQKDVLTT
Ga0182217_106512513300017446Switchgrass PhyllosphereMIKISGLEHLTASEQLEELEGLLDVSEGRSRSNQKDALTT
Ga0182217_110711713300017446Switchgrass PhyllospherePYGARVLRAPYMIKISELEHLIVSKQPEVLEGLLDISKGRPRSSQKDVLTT
Ga0182212_116254913300017691Switchgrass PhyllosphereMIKISELEHLTAAEQLEEVGRLLDVLKGRPRSNQKDVLTTYLKKLH
Ga0182216_112944313300017693Switchgrass PhyllosphereMIKISGLEHLIASKQLEVLGRLLDERKPGSNQKDLLTT
Ga0182216_113814823300017693Switchgrass PhyllosphereMIKILGHEYLIASEQPEVLGRLLDVPEGRPRSNQDDVLAT
Ga0182211_112126313300017694Switchgrass PhyllosphereMIKISGLEHLTASKQLEVLGELLDVPEGRTRSNLK
Ga0182146_10473623300020033Switchgrass PhyllosphereMIKISGLEHLTASKQTEVLEGLLDVFEGRTRSNQKDVL
Ga0207697_1036047513300025315Corn, Switchgrass And Miscanthus RhizosphereMIKISGLEHLTASKQTDVLEGLLDVFEGRTRSNQKD
Ga0207653_1005965523300025885Corn, Switchgrass And Miscanthus RhizosphereMIKISGLEHLTASKQMEVLEGLLDIFEGRTRSNQKDVLTT
Ga0207662_1043386913300025918Switchgrass RhizosphereFRTPYMIKILGLEHLTTSEQPEVLGGLLDVFEGRPRINQKDVLTT
Ga0207650_1040983423300025925Switchgrass RhizosphereMIKISGLEHLTASKQMEVLEGLLDVSEGKTRSNQEEVLIT
Ga0207641_1186985413300026088Switchgrass RhizosphereMIKNLGLVHLTASKQPEELGRLLDVLEERPRRNQKDVLTT
Ga0207676_1226600523300026095Switchgrass RhizosphereMIKISGLEHLTASKQMEVLEGLLDVSEGMTRSNQKDVLTA
Ga0268322_103959613300028049PhyllosphereGATPYGARVLRAPYMINISGLEHLTASKQTKVLGELLDVPEGRSRSNQKDVLTT
Ga0268328_105311913300028050PhyllosphereMIKISGLDYLIASKQMEVLGGLLDISKGMTRSNQKDVLT
Ga0268344_101381923300028051PhyllosphereMIKISGLEYLTASEQPEVNGRLFDVSEERPRSNQKEVLAT
Ga0268346_101401623300028053PhyllosphereMIKISRLEHLTASKQTEVLEELLDVSEGRTRSNQKDV
Ga0268346_102129523300028053PhyllosphereMIKISGLEHLTASKQPEVLEGLLDVSKGRLRNNQEDVLTT
Ga0268306_103064413300028054PhyllosphereVLRAPYMIKISGLEHLTASEQLQVLGGFLGASEGRPRSNQKDVLTT
Ga0268332_101713623300028058PhyllosphereMIKISGLEHLTVSKQPEVLGGLLDVSEGRLRSNQKDILTT
Ga0268332_103501913300028058PhyllospherePTPYGARVLRAPYMIEISGLEHLTVSKQTEVLEGLLDVSEGRTRSNQEEVLIT
Ga0268332_103889313300028058PhyllosphereMIKILGHEHLTASEQPEVLGRLLEVLEGRPGSNQMDVLTT
Ga0268314_103229013300028061PhyllosphereMIKISGLEHLTASKQMEVLEGLLDVSEGRTRSNQKDVPTT
Ga0268314_104492913300028061PhyllosphereTPYGARVLRAPYTIKISGLEHLTASEQLEVLGGLLDVSEGRPRSNQKDVLTT
Ga0268340_105726913300028064PhyllosphereMIKNLGLVHLTASKQPEELGRLLDVLEERPRKNQKDVLTT
Ga0268340_108625613300028064PhyllosphereMIKISGLEHLTSLKQPEVLEGLLDVTKGRPRSNQKDVLT
Ga0268310_104614123300028262PhyllosphereMIKISGLEHLTASKQMEVLEGLLDVSEGRTRSNQEEVLII
Ga0268266_1149639813300028379Switchgrass RhizosphereMIKISGLEHLTASKQTEVLEGLLDVSEGRTRNNQE
Ga0268319_101435213300028473PhyllosphereSGATPYGARVLCAPYMIKILGLEHLTASEQPQVLGGLLDISKGKPRSNQKDVLTT
Ga0268319_102073413300028473PhyllosphereISGLEHLTASEQPRVLGGLLGASERRPRSNQKDVLTI
Ga0268339_101014613300028526PhyllosphereGSGATPYGVRVLRTPYMIKISGLEHLTTSKQMGVLGGLLDEVEGRSKSNQKDVLTI
Ga0268335_101814013300028527PhyllosphereRTYMIKISGHEQMKVLEGLLDVSEGRTRSNQKDVLTT
Ga0214493_107193123300032465Switchgrass PhyllosphereMIKISGLEHLTASEQPEVLGRLLDVPEGRLGSNQKDVL
Ga0214491_113832213300032469Switchgrass PhyllosphereMIKISGLEHLTASKQTEVFEGLLDVSEERTRSNQKDVLTI
Ga0214490_111210513300032502Switchgrass PhyllosphereLRAPYMIKISGLEHLTASKQLEVLGGLLDVSEGRQRSNQKDILTS
Ga0321339_112313213300032551Switchgrass PhyllosphereMLKISGHEHLTASKQPEVPGGLLDVSEGRLRNNQEDILTTWSTQRHP
Ga0321339_115585913300032551Switchgrass PhyllosphereFSYEGTLHTPYGARVLRAPYMIKISGLGTSLPRSNQKYLERLLDVSEGRLRNNQKDVLTT
Ga0214501_117869223300032625Switchgrass PhyllosphereMIKISRLEHLTASKQMEVLEGLLDVSEGRTKSNQEEVLII
Ga0214497_110981013300032689Switchgrass PhyllosphereSGATPYGARILRAYMMKISGLEHLTASKQTKVLGRLLDVSEGRPRSNQKDVLTT
Ga0314719_103611913300032821Switchgrass PhyllosphereMIKISGLEHLIVSKQLEELGRLLDVLEGRPRSNQKDVLTT
Ga0314719_104592213300032821Switchgrass PhyllosphereMIRILGLEHLTASEQPEVLEGLLDVSEGRPRSNQKDVLTT
Ga0314723_104650523300032823Switchgrass PhyllosphereMIKILGLEHLRASEQPQVLGGLLDASEGRLRSNQKD
Ga0314747_100987813300032890Switchgrass PhyllosphereTPYGARVLRAPYMIKISGLEHLTASKQMEVLEGLLDISEGRVRSK
Ga0314734_108355713300032916Switchgrass PhyllosphereKISGLEHLTALKQPEVLGGLLDVSGGRPRSNQKHVLTT
Ga0314752_107849113300032976Switchgrass PhyllosphereATPYGARVLRAPYMIKISGLEHLTASKQMEVLEGLLDISEGRVRSK
Ga0314752_111503013300032976Switchgrass PhyllosphereVPYMIKILGHEHLTVSEQTEVLEGLLDVPEARTRSNQKDILTT
Ga0314768_135942813300033523Switchgrass PhyllosphereLRAPYMIKISGLEHLTASEQPEVLEGLLDVSEGRPRSNQKDVLTT
Ga0314760_111128613300033530Switchgrass PhyllosphereMIKISGLEHLTALKQMEVLEGLLGASEGRSRSNQKDVLTT
Ga0314760_115676813300033530Switchgrass PhyllosphereKISRLEHLTASKQMKVLEGLLDISEGRTRSNQKDVLTA
Ga0314770_123268213300033533Switchgrass PhyllosphereIKISLLEHLTASEQPEVLEGLLDISEGRPRSNQKDVLTT
Ga0314757_105460713300033534Switchgrass PhyllosphereMIKISGLEHLTGSKQSEVLGRLLDVSEGRPRSNQKD
Ga0314755_106374913300033538Switchgrass PhyllosphereMFKISGFEHLTASKQQEVLGRLLDVLDRRTRSNQKDVLII
Ga0314755_115856913300033538Switchgrass PhyllosphereGARLLRAPYRIKISGLVHLIVSEQPEILGGLHDVSKGRPRSDQKDVLTT
Ga0314769_128524313300033542Switchgrass PhyllosphereMIKISGLEHLTASKKPEVPGGLLDVSEGRPGSDQKDVLTT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.