Sample 3300031664

Basic Information
IMG/M Taxon OID	3300031664 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128948 \| Gp0324308 \| Ga0310118
Sample Name	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA5 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA5 (Metagenome Metatranscriptome)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	35167571
Sequencing Scaffolds	45
Novel Protein Genes	48
Associated Families	47

Dataset Contents

Total Genome Size

35167571

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	38
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	1
All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena	1
All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Longamoebia → Centramoebida → Acanthamoebidae → Acanthamoeba → Acanthamoeba castellanii → Acanthamoeba castellanii str. Neff	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Fibroporiaceae → Fibroporia → Fibroporia radiculosa	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila

All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena

All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Longamoebia → Centramoebida → Acanthamoebidae → Acanthamoeba → Acanthamoeba castellanii → Acanthamoeba castellanii str. Neff

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Fibroporiaceae → Fibroporia → Fibroporia radiculosa

Ecosystem Assignment (GOLD)
Name	Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Ecosystem Assignment (GOLD)

Name

Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Type

Environmental

Taxonomy

Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Unclassified

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

Unclassified

Earth Microbiome Project Ontology (EMPO)

Unclassified

Location Information
Location	Norway: Oslo
Coordinates	Lat. (^o)	59.9989	Long. (^o)	10.7903	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Location Information

Location

Norway: Oslo

Coordinates

Lat. (^o)

59.9989

Long. (^o)

10.7903

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000605	Metagenome / Metatranscriptome	993	Y
F001363	Metagenome / Metatranscriptome	713	Y
F001429	Metagenome / Metatranscriptome	696	Y
F001758	Metagenome / Metatranscriptome	640	Y
F003383	Metagenome / Metatranscriptome	490	Y
F003497	Metagenome / Metatranscriptome	483	Y
F004178	Metagenome / Metatranscriptome	449	Y
F004452	Metagenome / Metatranscriptome	437	Y
F006508	Metagenome / Metatranscriptome	371	Y
F006591	Metagenome / Metatranscriptome	369	Y
F008027	Metagenome / Metatranscriptome	340	Y
F009017	Metagenome / Metatranscriptome	324	Y
F009282	Metagenome / Metatranscriptome	320	Y
F011467	Metagenome / Metatranscriptome	290	Y
F016972	Metagenome / Metatranscriptome	243	Y
F018180	Metagenome / Metatranscriptome	236	Y
F018933	Metagenome / Metatranscriptome	232	N
F022801	Metagenome / Metatranscriptome	212	Y
F023257	Metagenome / Metatranscriptome	210	N
F023505	Metagenome / Metatranscriptome	209	Y
F025750	Metagenome / Metatranscriptome	200	Y
F030305	Metagenome / Metatranscriptome	185	N
F031388	Metagenome / Metatranscriptome	182	Y
F037019	Metagenome / Metatranscriptome	168	Y
F038563	Metagenome / Metatranscriptome	165	Y
F039646	Metagenome / Metatranscriptome	163	N
F040634	Metagenome / Metatranscriptome	161	N
F043715	Metagenome / Metatranscriptome	155	Y
F058585	Metagenome / Metatranscriptome	134	N
F058623	Metagenome / Metatranscriptome	134	Y
F059538	Metagenome / Metatranscriptome	133	N
F059539	Metagenome / Metatranscriptome	133	N
F059694	Metagenome / Metatranscriptome	133	Y
F062326	Metagenome / Metatranscriptome	130	Y
F067447	Metagenome / Metatranscriptome	125	N
F068474	Metagenome / Metatranscriptome	124	Y
F070743	Metagenome / Metatranscriptome	122	N
F071456	Metagenome / Metatranscriptome	122	Y
F081973	Metagenome / Metatranscriptome	113	Y
F083663	Metagenome / Metatranscriptome	112	Y
F086425	Metagenome / Metatranscriptome	110	Y
F096368	Metagenome / Metatranscriptome	104	Y
F100551	Metagenome / Metatranscriptome	102	Y
F102319	Metagenome / Metatranscriptome	101	Y
F102578	Metagenome / Metatranscriptome	101	Y
F104140	Metagenome / Metatranscriptome	100	Y
F104188	Metagenome / Metatranscriptome	100	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0310118_108297	Not Available	885	Open in IMG/M
Ga0310118_108598	Not Available	869	Open in IMG/M
Ga0310118_109606	Not Available	820	Open in IMG/M
Ga0310118_109871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	809	Open in IMG/M
Ga0310118_109992	Not Available	804	Open in IMG/M
Ga0310118_110115	Not Available	799	Open in IMG/M
Ga0310118_110137	Not Available	798	Open in IMG/M
Ga0310118_110577	Not Available	778	Open in IMG/M
Ga0310118_111232	Not Available	753	Open in IMG/M
Ga0310118_111703	Not Available	737	Open in IMG/M
Ga0310118_111927	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	729	Open in IMG/M
Ga0310118_112358	Not Available	714	Open in IMG/M
Ga0310118_112488	Not Available	710	Open in IMG/M
Ga0310118_112495	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena	710	Open in IMG/M
Ga0310118_112500	Not Available	710	Open in IMG/M
Ga0310118_112613	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Longamoebia → Centramoebida → Acanthamoebidae → Acanthamoeba → Acanthamoeba castellanii → Acanthamoeba castellanii str. Neff	706	Open in IMG/M
Ga0310118_113313	Not Available	684	Open in IMG/M
Ga0310118_115290	Not Available	632	Open in IMG/M
Ga0310118_116100	Not Available	614	Open in IMG/M
Ga0310118_116151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	613	Open in IMG/M
Ga0310118_117024	Not Available	595	Open in IMG/M
Ga0310118_117621	Not Available	585	Open in IMG/M
Ga0310118_117752	Not Available	582	Open in IMG/M
Ga0310118_117769	Not Available	582	Open in IMG/M
Ga0310118_117801	Not Available	581	Open in IMG/M
Ga0310118_117910	Not Available	580	Open in IMG/M
Ga0310118_117977	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Fibroporiaceae → Fibroporia → Fibroporia radiculosa	578	Open in IMG/M
Ga0310118_118181	Not Available	574	Open in IMG/M
Ga0310118_118213	Not Available	574	Open in IMG/M
Ga0310118_118306	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia	572	Open in IMG/M
Ga0310118_118658	Not Available	566	Open in IMG/M
Ga0310118_118906	Not Available	561	Open in IMG/M
Ga0310118_119152	Not Available	557	Open in IMG/M
Ga0310118_119372	Not Available	554	Open in IMG/M
Ga0310118_119632	Not Available	550	Open in IMG/M
Ga0310118_120608	Not Available	536	Open in IMG/M
Ga0310118_120670	Not Available	535	Open in IMG/M
Ga0310118_120956	Not Available	531	Open in IMG/M
Ga0310118_121002	Not Available	530	Open in IMG/M
Ga0310118_121348	Not Available	526	Open in IMG/M
Ga0310118_121609	Not Available	523	Open in IMG/M
Ga0310118_121614	Not Available	523	Open in IMG/M
Ga0310118_121766	Not Available	521	Open in IMG/M
Ga0310118_121901	Not Available	519	Open in IMG/M
Ga0310118_122089	Not Available	516	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0310118_108297	Ga0310118_1082971	F030305	LQFIGSCIVPFGFLVPVPSFLFPALSDLARRCSSGRPVPRVSDRTGDEASSCPDSSVFSAVPADGSSSRPDSRILQLGSPQIARLPRLSTSCLAVDERPGCPVRSIIWLYRRRRFRVAPNLTSFGGTVSNSPSRPGSSLLQPLPLMVLRVAPGAPSSGFAGGDSSGCPEALIPRLCRLVAFRVSPDLPPSDICRFRFSGLPQIGFLGGSMMNPRFARTLHPRSIQLTSLQVAPKFPLPAAPRMNLQTHSGLAFLPTLRCSLNLYPLIACRRTGLLRTTINQFRIACRAGLQSVS
Ga0310118_108598	Ga0310118_1085981	F039646	ARWCNSGPKKRIRALVHRHQHSHGELNRGEQEYWVSEDGTVTQKNVDTGEPYSHPSVEGLFHQFTAKTKHGGVAWTVTKMGGDTYQFEFVSCKKEVCGDYVPLRFLKPETRIEWAYNDTVVRGFLGWTWMTVTKGDRKYQLVDCDLSDKLRRYIAGKPRNARMKSELMNYARRLTNKADIIAIHGGGAHEVLVGRMSDYVENAFYCDVRHELEVAMSYWRRNHVVTEALTTYYETGKMPLDVAKIQKAIKVGVNTMTSAAHLPALALGGVALATGGVGPAVLASSMAVT
Ga0310118_109606	Ga0310118_1096061	F018933	LFRSVPSCWSQPSLLRRSRITPRSTLDSLYRPRIAPRSVLIDRCCPPIARRSTLNAPRRSQIAPRSTLCARAGHGLLRVQHLESSPRVQIAPYSTLCAPRRSQIAPRSTLPARYRSRIAPLSAIDAPCRSTDISVRLHFAPCAVHGLLRAQHFKLRTAHRLLCVRRLHFVPIADCSAFLTPCLVSLADCSVLNT
Ga0310118_109871	Ga0310118_1098711	F004178	MRSRPSHAAKSGVGEHTARESESAHRVRRERACGERP
Ga0310118_109992	Ga0310118_1099921	F023505	KDDRKEVGEVPRIIPGDRGKVESGWLAQPLEDRFARGGNRRQYSPVPLAAFARSQ
Ga0310118_110115	Ga0310118_1101151	F006591	RSLGAPPSQVGGRLLDASPRGNAEFSVSWQNRRPDYSKRLLGEAFQRGSHGPCRGSVLHKVMRPLRHGLVTAVLQVGPRELPPERWPDGTGLASYPSIDI
Ga0310118_110137	Ga0310118_1101371	F067447	GPNPPHFAPRRNYFLLDTYTKRYTRIAPWLTLSAYAGRGLLRAQHFSALPRSRIAPRSTLGFQRLTRIAPCPALPALMLHPDCSVFSTCRSVPCTDCSALVPSRSAPATNYFVFDTWPFRPAPGCLRALDVLPCAVYRSLGVQHLALAPVTNYFVLDTWPSVQRPDASVLSTSRPALPADCSALTALRCARYGLLHAWHLALAPVKDYSSLDT
Ga0310118_110577	Ga0310118_1105771	F003383	MRLRVAPLPASSRPVRVAFPGCPFRAPFLLSRRPNPQVAPWLRSVGCAGDGRSSCPELRMPSAVPVSARFRVAPLPAFSCSAPDVGLGFPLVLHLRLYRRWITELPRCAHLSAVPSCQSSSYPEHQPFGIADDSSSELPRTSNPPAPIDGYPSYPGSHTYRFALF
Ga0310118_110950	Ga0310118_1109502	F104188	MMTTERALKGAVSDGKLLLPGVVAREMGCSGEKDNRGKYEAARSRQDDLGSGARNAMEKSVGHLGELGVTMIAGSGDFSSTKGKVRSKGAGMRV
Ga0310118_111232	Ga0310118_1112321	F058585	NLDHSQYSRCCVLRLPQWPPSSFRWRCYHWLRWLSELRLASGPCTPARPVANLPARIGFVSFGSTGCKPPTCVDCSALPLVLRRSIWLAPDDPGLIGLAPDNPGSTRLAPHGPFLRLGRQPTSDSHRCRPLARLAASSGLRLMLPLPLGWLRFQFALAASPSALTVREPLGLRLVAPSPAEPVMHSLFPPNLASTAKPSMSIPVPLALAASGIFQLNIFRLASAFALLVRPAIPLWLAPQVSPSVRAGGH
Ga0310118_111703	Ga0310118_1117031	F100551	ALIALRIQTPSGNDSTMNLQPCSSFVALLRSPASFQFVPLDLSTANRRPTLRLELNFSPAVQQMTGLFHLPLAFCLQPKPLADCFVPMDRLVSCLAFNLASSVCRILTLRC
Ga0310118_111927	Ga0310118_1119271	F011467	NTMIDNIRNDEFLTILRSQAGIVQSDLSYVDTEGKLQLDTDMLTKLQRVLLPVLVDALKYIPVSKITSSDKNRDIILDKIVICSYDIIPENIRFHLESDSEFSLQDVEVKGTHTQLFIQLNSLRTEIKDVEFYYKKKSFPALEDSGRVTFRIKGEGAKLSLTYKIDQGPKDKVPKVMEGNAHFDITNLEIDFVTSTLRHTVLIPMLTNLFKVQLKKQIEEQVEKNLKNWIDKLGDMMSSTIS
Ga0310118_112358	Ga0310118_1123581	F096368	MLLLFEVIKTKPSGRTEFLGAFLVDRVNDFHARTIRLSMYFVGSRKGDGDRDCDSSIELSESLNKKDTRTLFLRIDIVIGFDGSKW
Ga0310118_112488	Ga0310118_1124881	F102319	MIPGPITSWSKSLLRYKSKTKVMDAAAADRTSLMKKKKDGPSRAMLRSILFSVLHV
Ga0310118_112495	Ga0310118_1124951	F022801	RKGTTISGQVQKFNRFRTSGLGKLVLQTQAVMGMQLMAMRPAHSSSGASQVTVVPPQLFPMTVIGEQLRPTRTSRPVRSSPRRAATADAAVLLEGTVLAQHCGEVGGVTGGGGVPLGMAAARVMSTETTTTESLENMFNLVESLNFGGMFE
Ga0310118_112500	Ga0310118_1125001	F009282	MTETRVPYPVHADTPLDPPPTSRTLLHQMRPWPPMWRRPLQDRPPYAVWVIGSLVAWALVLAGFMAWDLNSTSRTVVWFLFEGWCIGVLSASIARKIYR
Ga0310118_112613	Ga0310118_1126131	F083663	MIARVCLFALLVVVVSSQEPTKPVWPDQFVASFGLNMASADIKNASSTFYSNWEIKAQLIDYPTQCIPFNTAAAKQDCKIWFLPAGAYISIPQQQICCLWFPGVGAVPPDFLTPFNYSGSIESVPDQYGVMHQCYLWVGDGFAYWTEVKTGFDIQFRDGPGDTFWNFGTFTSAPQDPSIFALPANCGGTCPSSISHEPSLLFATYLG
Ga0310118_113313	Ga0310118_1133131	F023257	NMLCAPTPTDAIGLSARSLLRAIVVLMIVCLIQIAWTISQIIRLGFIQHSPEANNLIYHLISPSLYSVLLLLGFLGVRRRSVCLLKTFYVLQAITVVLSVALVTGVSTYLAVSHPDLVQTACDFARKYPVQVAIGSVVALLLLVVKLRSIFYARVLALQLTLKSDALVEMKNVESDSEEPLQPAQPMFVVQQPAFAAPANGQEALYMQIPATAHLIPVYVDRAGNPV
Ga0310118_113705	Ga0310118_1137051	F104140	MKSKNKLDGASNFRAWKTRIDLILAKKKVLDIVKPEFE
Ga0310118_114483	Ga0310118_1144831	F104188	WKSILGMTASLWAIMWQAITKNMKNMMRIERNLKGPVIDGKLALVGVVAREMGCLESREGRGRYDVTRSRNEGLGSGARNAMEKSIEFLGELGVTMIAGSGDFSSTKGKVRSKGAGMRV
Ga0310118_115290	Ga0310118_1152901	F000605	NISTMRVVLLIAVLIATVFAQTPTKPVWPKAASASIFVEGWGEERHERHFFRWFYDEAAGKERLEGPQRFEGEMYFTTTILDATTQKEWFVVHQGSLVTCYVGAWNHSLPHPNYDNARFVGKAEIDFRVVNHWIEPRPEGRESQLYDRADNGQIVRIDFEDRRRREVSVHFHEFNAGTQDPSRWDLPAQIKNICNQIP
Ga0310118_116100	Ga0310118_1161001	F025750	MEKADAHRSIDPWPAKTGGGEQRAHVTPSSDAGFWPCMPVGERADRR
Ga0310118_116151	Ga0310118_1161511	F071456	IPLPGPPPRRQALPPRRAAPGQTAAERITLMTNNTLSKAPVSQAPVQPDQPARDATTDRCHELARTERGWERCHRDEHPADGRHHVRDRSWLSTVSSPLLQLGQPCTGACQWPDQVQPYRGTAKGRHY
Ga0310118_117024	Ga0310118_1170242	F008027	MGQIKILVGNYGGKDVTAITKQQYKANKHFTATNAAFGDPLPGVVKFLHVIYSFEGVLGSVSIPENKNFEPVPPKLVILGALYGGADVTDKVRALVPHGADHGAFQVENAHFGDPNPGIFKN
Ga0310118_117621	Ga0310118_1176211	F059694	MGSAQAEIIAGEGKAVTSERSRLGEKEKAAARLEAMKRKPDKPVSGELTDEAHGAPERDAQYRACR
Ga0310118_117752	Ga0310118_1177521	F040634	MHGTEHRISDCRAYSPQAPRLLAYPASASSPLDAPQLIFPKRDRSLAAAFPSSRTPSACADSTLRSMVLACYFAHSLAVRPARSAFWLPRQTLVGPSFRRHPRLKPVAFCTGPLCQLCRQVPLPFRSFRSLQIKASLGVATVRSAFRNCPIFVRSPQPFLLKFGCGS
Ga0310118_117769	Ga0310118_1177691	F086425	MVLACYFVHSLAGFSCSFGFRLRRLLLVCPSYRLHPRFKPVSFLPGLLCRLCRLYPLPIGSFRSLWINASTGFATVRSAFRTCPIFVRSPQPFH
Ga0310118_117801	Ga0310118_1178011	F003497	SNSPLPDRHARSKHGSQRIGDVALLLPVTAFIRLRISAPEPIRHFYLLEASVSERPFARPQRLFSFENHRSEVKAPDLSLRRNSELFFQPVRPSAPTLDGVRHASGDIRRRKPVAVSRAQNSQTSIQPSLPFRTFVPPDRSAQSAAWSEKLTLVPGPFFLRSPKASITF
Ga0310118_117910	Ga0310118_1179101	F059538	PGVSMLGGRVVQPLLRPSATPAVRLQLSLPLLPLAAPVSNLRLASAALPPARPRANLPARIGVVSLGSVSGKCSAFAAYYALPIDWLLTFQLALVSGLQLGLRLLPTHIWRCPSARLALQLPVLTGCCCNN
Ga0310118_117977	Ga0310118_1179771	F016972	TDEIPVVNLYLTIYGIDRVSFGAKTSRYGPYELGYRRATKNFTKXCKIVP
Ga0310118_118181	Ga0310118_1181811	F031388	VGRKTAESVERFDPEGCKSPGGEWRPRKQSSGPARRAATGLKRRSCPQLGQTSEGRGAEGGPGGEPSWEVAKWQVRTVDPGMEASEREQPLWARERPLRATGSVEEKDAVRPGGIDPEAEKLALGERNGEALSAP
Ga0310118_118213	Ga0310118_1182131	F001363	MRVAILLFAILVAVYAQTKPIWPPAASTSILIEGWSDRRDDRHFFRWFYDENVAKERMDGPERFLDEWYLTERIVDAKGQQQWFVAYQEGLVNCVSSKTNQTLPHPNLNNIRFVGKAEINFRVVDHWIERDSLNRDIAQIYNRDDNGEIVRIDNSDPRRNRALTIHFHEFNAGTQDPSLWTLPQNILDICN
Ga0310118_118306	Ga0310118_1183061	F001429	SSDKNREFWLDNIVLCSYDVIPENVRFHLESDSELSFKDVELKGTQTYLVIQLDRLLTELKDVEFYYRRKVFPEIEDSGRVTFRETGTGSRLTLTYNVLQRPEDKVPRIMEGNVSFDISNLEIEFDTKTLKHDVLVPMLTKMFKLQIKQQIEYQVEKNLNGFLNKLGDLLMNSIAQTNKPFLSGLEAARK
Ga0310118_118658	Ga0310118_1186581	F004452	VGRKVSILRERNRTQGNGTAKHSALLDAMLSAVHAGGEQGWVS
Ga0310118_118906	Ga0310118_1189061	F009017	SLAHHGHASVLSIAFRIAVRFAYLLPGNRFGGYRFNAFRRAAAFYPKLDRSLVTAFPSPTTASAFANSIPGSMVLACYFTVSFARCHARSVFPLNRRNWFAPIPAASTLQTRCTFTSKLIRPHSPSPLPSRSFSSFGIKAFNGRRCRPVRLPNPPDFRLLPATVLFLEEGYGSSFAVRYVFGGSLF
Ga0310118_119152	Ga0310118_1191521	F018180	FSSGSATVFDGAFARSHGSGLLSLRLPFAHMPAVFFSTSPSFRKFNEACLLSDPSRTGRSFVTPFSAFSVGLSLFTGMPFSSAPCWRTVATVYPLGNCDSLRFETCLSYFTRLGAVSHRPSSLSPFFAFTDSARTPPEELVNPASAVPPCGFPLEESGQPAWPDFSPVTWDYPGDLCHLSFVQLH
Ga0310118_119372	Ga0310118_1193721	F062326	SRVHGTIERTTGMLGVRSAAGCVRFIVSRSPATPFGARRVSAKNASSSPASCRSRKLGTAFRSPVTTLSPPLRGQRSRPAPSLPRRCFFAYPLDQRLLRSVRFRSRNRANSSPSTRCPRRSPALLRCHPISTPLQVACTFRIKAFNRLHHNKLASPDARLSFAPRRALFRFSLRIDARNPSSPC
Ga0310118_119632	Ga0310118_1196321	F006508	VAPANAPQKTVADRSLTVKTRENHRRVLTWFASRWCNHQPKRAEKPHSIIRNRKNPDGPA
Ga0310118_120608	Ga0310118_1206082	F068474	ISTGSAAVFDSAFARRHGSRLFTLKLLFFHSPAVSFLTSPTLGSFSRGLPSLRGLPGPDSRFVPPFGVFLLADPTFYF
Ga0310118_120670	Ga0310118_1206701	F102578	MSAEETFVALTRRRLKSGDGEQRVWNPEYPAADRAPSMP
Ga0310118_120956	Ga0310118_1209561	F070743	IEQLALPTGMRGQSLACSVAEALPSCSPQRLLARHGSVRQSSLALLPARSHRLGTAFRSPATTVLFREPPWRGQRSWPIPSALILNLSSSPFGLELPPSAAFVTPPGAFRAQDPLPSFKPRTLKRPSNFRSPSGLSSFRIEALGQRLSLRSLPFVTGPIFLRSPKALINFGNYALS
Ga0310118_121002	Ga0310118_1210021	F037019	HRMGLFHRLSPAKCSGIEPILQATGSRTWARLGSLSMSRQGAAFSHRRYDRDSFRRDRTPNRVAWRFPDWTVVGFAVPSPCLGSAPHGIPLPEHSRLFGLDPAIDGRLSLLGGRITRGDSNPDCLALAFLRLCCSGDLVAGRRLSPCPHLFASHGLSLLESRSQLSGAFSFFAGHF
Ga0310118_121348	Ga0310118_1213481	F043715	KSTTTTMKFTSVLIALCATAVAADSRPFKFKLVTPNKTVYLTASGAGASSPAEAVDCTITGGAIACGPNRGGLGTAMHTKMAPSARAVNNRGWSVNANNRIVYRPNGKAFNIVTRGREMWVENCDAHPDGRTFVKGEAYAVYA
Ga0310118_121609	Ga0310118_1216091	F058623	KKVMNQLKALVLSLIAVPATVYAASTPPTVKAPKESCSNIEWNTAFLRDYPTAPAACREVTVKDGVKYATFNGVVSKVGHNFVQVSVSDVSDNPISMIAFQIGTGGRVTLGDKVEPVENLKVGDHLTFWVPEGRFGISPTLTDQPMTIIKPEAMSAN
Ga0310118_121614	Ga0310118_1216141	F001758	SQVTGEKSGQAGWQGSSKEKPQGGLAEAEFTSSSGSVRALSENAKKELSDEKR
Ga0310118_121766	Ga0310118_1217661	F059539	RPVPQFGRVLAKLNLRANQNTQVGDRDYMAGKYYSAAYEHRFVPGLKDLLLETAQGMSAKPHFDVRLTKMNEMGGVENIVSKVKNSDALDLDSFSDYLRDVYGIGFEDLMDAYGRVASGAMGWLDQYTYVDKKGKPHSKHPPRAQMIGGEAIEALIRHDI
Ga0310118_121901	Ga0310118_1219011	F081973	YTLDLYGLCTAQLCMLYGCGAANLDVVCKEYSSTTFICVCPGELVSYVAANTTSFQGCGSGSNGSGSGAPISQVLASVNTTHLEAFLVNGMEQILGAAIVTVNGNQFTLNINATVPIDGLTAELEKEIAAFLGGGYTAADVTVQYVSKRKRATSGTVIVSINGNASGASVFG
Ga0310118_122089	Ga0310118_1220891	F038563	WSTVNHRLLHNLTINQLPMANRRRNRRNRGGAQGTLPGPSKFVSPLEKDEAFYVKVQKPEGVPLHVTPTHFSVTLKGSTGQMLLHGSRCANTWTTGKIPVGDWVDVVLQASTDDTLALTSTIWYSSQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300031664: Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA5 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences