Sample 3300029861

Basic Information
IMG/M Taxon OID	3300029861 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133139 \| Gp0283944 \| Ga0245310
Sample Name	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37399
Sequencing Status	Permanent Draft
Sequencing Center	Beijing Genomics Institute (BGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300029861 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0133139 | Gp0283944 | Ga0245310

Sample Name

Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37399

Sequencing Status

Permanent Draft

Sequencing Center

Beijing Genomics Institute (BGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	191219001
Sequencing Scaffolds	11
Novel Protein Genes	24
Associated Families	23

Dataset Contents

Total Genome Size

191219001

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes onderdonkii	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides salyersiae	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Dorea → Dorea longicatena	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Acetivibrio → Acetivibrio ethanolgignens	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → Viruses → Duplodnaviria → Heunggongvirae

All Organisms → cellular organisms → Bacteria

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes onderdonkii

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides salyersiae

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Dorea → Dorea longicatena

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Acetivibrio → Acetivibrio ethanolgignens

Ecosystem Assignment (GOLD)
Name	Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Ecosystem Assignment (GOLD)

Name

Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Type

Host-Associated

Taxonomy

Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Unclassified

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

Unclassified

Earth Microbiome Project Ontology (EMPO)

Unclassified

Location Information
Location	United Kingdom: London
Coordinates	Lat. (^o)	51.5	Long. (^o)	-0.12	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

United Kingdom: London

Coordinates

Lat. (^o)

51.5

Long. (^o)

-0.12

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F029444	Metagenome	188	Y
F032312	Metagenome / Metatranscriptome	180	N
F042095	Metagenome	159	N
F044555	Metagenome / Metatranscriptome	154	N
F050794	Metagenome	145	N
F055775	Metagenome	138	N
F056309	Metagenome	137	N
F058555	Metagenome	135	N
F059106	Metagenome	134	N
F060985	Metagenome / Metatranscriptome	132	N
F064817	Metagenome	128	N
F070093	Metagenome	123	N
F075481	Metagenome	119	N
F076064	Metagenome	118	N
F076653	Metagenome	118	N
F077313	Metagenome	117	N
F078005	Metagenome	117	N
F080673	Metagenome	115	N
F083451	Metagenome	113	N
F085718	Metagenome	111	N
F089592	Metagenome	109	N
F105374	Metagenome	100	N
F105375	Metagenome	100	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0245310_100099	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	150000	Open in IMG/M
Ga0245310_100961	All Organisms → cellular organisms → Bacteria	26679	Open in IMG/M
Ga0245310_101171	All Organisms → cellular organisms → Bacteria	22861	Open in IMG/M
Ga0245310_101822	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes onderdonkii	15908	Open in IMG/M
Ga0245310_104346	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides salyersiae	6964	Open in IMG/M
Ga0245310_109874	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	2834	Open in IMG/M
Ga0245310_110001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2794	Open in IMG/M
Ga0245310_111128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Dorea → Dorea longicatena	2484	Open in IMG/M
Ga0245310_114914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Dorea → Dorea longicatena	1792	Open in IMG/M
Ga0245310_118979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Acetivibrio → Acetivibrio ethanolgignens	1372	Open in IMG/M
Ga0245310_142901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	581	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0245310_100099	Ga0245310_100099102	F083451	MIMDKNEREKQVLDLLMSRKDIRKLVEKSNECYSKMDFVGAMKHRQEIKDIVDRESKIMLTKSESLIGLMNNADNEYKFNMLVWLHSMMCMADVFNGILEDFKDGVRKANGNSKFVKFDNLDRLMTECKKEIDYLMKGTSKSFQISFAVRSDELREMIENMVGDNIREGYDIFKEEAEMVNETDRSKIEEFNKKLDHD
Ga0245310_100099	Ga0245310_10009912	F089592	MKEILKSKKVLVEVNGFNIMSDTLYEVVGKHDGSAPQAFQDANIAKAPFPENATHVCCPWDDFSKAYNTGFYPRSRCYNGMDKDEVDRLVNQRVNNIMKPFEDISQKDLSQTNLEFWDDAKDKIFMGKVYNTANTVELFYLYLAVFSGMLTPQEMDGDPIFMNSMFCFIEKDNAKDFVQQREINKMNISYKFINALKKGDKERQAVIDLLLYIGIVTRPDFTEDDYYTGSLSNWMNEKKTNIDYLLDIWDRSLEGDFKEVLEFYRIINVLQRNGRINMTPSGLQYNGQIIGPDTRTSAEFLATKKDLISVKANVLDEYEELMSISNIDDKTKKVKGGKKKEDVDEGDKVNTEE
Ga0245310_100099	Ga0245310_100099121	F078005	MEKSKFVKELERIIDMVKAEDDGFEYGGKVIFYKEDDDNYEISLKNIEMNLMVEANTMASMNDRTFACLMSEVYKQKFTKAITISEDEDDEDN
Ga0245310_100099	Ga0245310_100099156	F085718	MVIEFDFEIYKNGDYDKVYLRDGKEPRVLCDNGEGDHPIVVMVEDDNANDYIVLRYNETGRRNINGQSSLDLMLSVKEREPELWVVVISYIDNKDKRQKMVLPNFFSRNIGGNIYLQGSSKSNVSYYVGRLEEDGCFDELCEKIRVKRDRIYNMEIISLSDDKATV
Ga0245310_100099	Ga0245310_100099165	F080673	MDEIELLRLQDEALSYLRDNITKDEAYYILTTENEMTEVLMSKRKDGSKRIKILDAEYTIEKDDMLFLFDTDGVIDECLLVASYIGVNMYFRRQDVNAILNNINREKVLKYPYIAIQLDNIQTVEKRRVVFEITGHRMDDNKERIDFMFVYFMARML
Ga0245310_100099	Ga0245310_10009919	F042095	MAKTLYKYEASSNKFVWFTTWDRALRNYYTDDYNYVPDPVVGNPFNTFVEFRSRKPGMANVDWGDGIKEQFHMTKVQGQDDYRIIFRSLAIQHKKNPNTTWWFRKEDGSQYVPVDNHAYADGRRDVQRAVSIDFTCDIYYANIQTCKMTAFPIVDIPGLEFLVVSHTMYVNDGIPVDKLSRSNKLIYIDLSSVGQRMTVIPEAITSKTEVYYLNMFNMLDLRDIESSGIRNIKNMKNLQTLDLSSCYLDRYIKEFNDLPKLTSLNITQGPSDMWNYFDINTLPFFEVDKINPNITNFIFLDDWKNGERRTNWNDDNMSGRGLDHLTYFAASHSNGIRVDKLPDYIYEMRAITWFGMSCSTHSQKRSDDFVNSFYDLVVGWDQITMASVAKDGERNQFYGLAVSMYGSQYPDENQRPSGMEQAPEGFVKGQSNGSPATPMEKIYVLKNNYAQKWTIKPE
Ga0245310_100099	Ga0245310_100099198	F058555	METKIRFLHIMKSNFDKILTERYIPRNIQTKKDELGCVKLPAGSLICPVDFKPVTNKEGKKVTAIKYSLKHEEYHGSGIQISDECKMAMIYLIIINVSKHVFLRKRMQDGNRDQIEINTNDFIDILSDGCAYFCYRHVLRDSHEDMNYQLISLKAWAEGEIMIALSDIIKYKHKASKTPRIKDMFVKKGESVYTCLDKNLDSNTRRRMANKSRKLNRVKMLSKIIFSARNRNINKIYKVTKKRTIKFNVSYLMDRLNIKLSKEGMMLISQRTVYRMIKEVLSMCCKTISDLYDEVKKNNGIVNTKDRKNVTIGHLRLSYRGTIMHIIIAEYFIKDVFLGVKGVEMSKAG
Ga0245310_100099	Ga0245310_10009923	F075481	MMRLRISLKAVFCLGLSLSLSSCGSRRQVSEASIDSRLISRIETMINEVIDRKMVEIKTSDLNADIVITERKFDTTKEVDPATGERPVSFQTDAHIVIGRRDSTVTADSLGVNKTRNDIKDLDNKTNIKSKDVDDKKESRWSIVWIVAGILMILLVLVYILKRVNVL
Ga0245310_100099	Ga0245310_10009955	F077313	MSKYVIKRKIPKYQEAGEVGSYMLGNMDGIQGLGIEPLVNTNQGLPAPVNPLGIYSLDTPDQLRTKYANAFDQDNVFPASFKGSLQRIAENYQDNGITLNNITVNDVDKSKTGSGETDVFDFTTIPYYGADDIGSRFTQMGRGIGRMRSEGYGDLSTGAKTANTITTIASGISGIMGLARNVVSGIASEKGTRTNIRLAQDREARQRRQSQMQYKDGGGVYLGPNNRFDSGSLTGEYLYPLPKSMEDQANVEVEKGEYVSQPGEAPMEAMGQKHADGGTPVSLEQGTKVITDDTTIEPDFAKYIRDTYGIKATPKDTYATLMDRYKAKIGLKSAYDDQKKALEKLEKNNKIDDENTRRLNASVLSKAINDSNDIVNGLEGRFTDFANVIYKEQEDRKMKKDEDTYFAKGGEIDNIISRSMKEYGLTEEDIAEAKKELLKKVAGIRQKMEKGGSSLFDYLLTFRPVENKYNNKDNTFGYQRQGQDGSYGGINTDERLEYYKTFMPLAYDAYMSAPKATAAKALQDAIYSTTGGWMGLATAENPIIANAEALRDYTTLVSFGGEDSQGNYPEDKKASYHDRMRDNKFGQYSSSRPMIGLDVVTEEQHKALNDAGITHFSQLFSDKNKDVVNKILGEDMLKMQALRSMKGMEGLDFILDPHKVAPGPMDIGDVEEPDVKLDMPELIDPNTLPKTNTNAGKSNSGNGGRNIVGGGLDFPEVFRMTPGAVTTEGLERHYAPTVDPVLRSADQYMVETNRAFQSQLDQMGNVPDSQRGALSSNLQAIMSSNIGRYINEVEQGNVAQRTWADNVNARTWSDTYDKNIAQRQAYQQRILQGLAINDENWARYFDSVNDEIQQKWNTATTMNTLRSIFGGVKIGPNGQLIADPQGDILSYRRLYPAQEVTKGKKG
Ga0245310_100099	Ga0245310_10009958	F050794	MAPVGTLYIMQLDAFLHRKIMQDLRIQRAKVLMMLYTSHYFVNNRQKQLLDHTYALSRDQAFDYMTEFNKRLSDKVGIKCTMDILLPTDDDNANIIIEYNGIIKKLMKEAEKLELDTDAIKEMMRDLLNELKDDIDLNILIFDVTQLLIKYNLFRLDAITEQEFKDSFVRMDSRSMEIKKLTLSDIKKVVMMMEDRYSYISSI
Ga0245310_100099	Ga0245310_10009993	F076653	MTIRDKYFGWKDIFFDRFVHCCNEKSDQPQGSNIPLAKINFDNKTGYVEDGTINIAELLQYLWINNKVYGCEYAPIDISSALQTLIRLTENAKHMFEDQPGVYDMIPYRGFFLRDDFLSGKDYSLDLDKIVSGMGGWYGEDEDPCYSMFVSQDQIWNLNPILKVLADEGSILAKELGYDMNSYVSDNGYTIYNPYLSWINHYYHYCPTFNEDKLKPWDRVEDRKNKFKMTDKVKRGANNWYYSGGTISCVDNFLGKEYRKNLRTFIYRGIVFFLDRIWHTPLFEKMGVKMKYNAYYCYAATSGIWYDKGFKERLAKRFNKSLGGDGELFGANLACMVCDRKDIDWEALRLWLDKYDDPTDKGMVNSPIQFMYLYLYYTFNK
Ga0245310_100961	Ga0245310_10096139	F064817	MNIKNLFNRFRKREPELSYSLNLIYLEDTKVVFNQNIQCAKDLENYLSAYMRLFGMYSDKPYVLIYQEYKNRYWVYDKEPYLLYYKVPLIVNTSRKLSGKSDMVITKEKYQAAKDLVPAHEVSDRFKIPEYITGVFTDIWYKCQGYMDTDHVGLEEILELMQHNWLKEFELLVFKRNYDTDMLFLNHSLTYILDQTEEEGRRICIQNIIERNINQENQDENETI
Ga0245310_100961	Ga0245310_10096141	F105375	MKNNETFQTTQHLDKLVTNLGLQIQELFSLDLEEILNYSNNLMNLLVNAYVENQCLALSAMISKQDGFAIYSFLFQTPDTSNGAADALVNFAMNFTDGEANIKSINRISLNIMQITFTV
Ga0245310_100961	Ga0245310_10096145	F044555	MKTTNPSSRITISQNGNQILTCKVYKEPNYILSMSNEEILELISGLNYMGNLPMVPDLNKPIEIQVSATRQIPLEQNKEVQTRIKEIIYNNLYDTLVDELKDTISRFQAQYNIQEINPYLQDILQNPEDLISLSQHHKR
Ga0245310_101171	Ga0245310_1011714	F060985	MSNIDEKAKNNLTIEMRIFENYEKVKYEIIKVIDFLRHEETNLGMCRIFDNQNHEFWHSVIKPWFQPERFGITHLWFLSGFSFIGYGEYHTIRGNRWLKTPIDKIDRENRIFGYWFPYYKKYIPHRIKVLKLALKDLERIKEEYGKD
Ga0245310_101171	Ga0245310_1011715	F032312	MARIKDYDEDLSAPKLLKERARDNKGRFIKKDLPPYLGSEQVLKPKNYYHFDSHGNYKGSSMNFDALVCLGFTWFKLLGVALMMLLWPIVFIYALNDGIEGYPFKKYAIPYIFILVAWFIIFLYGLVS
Ga0245310_101822	Ga0245310_1018228	F076064	LKKTTPGRALENLFYLQYDLPPEASFHATTEEAKRPDELYMRKLLPELIRLKLQPRHVVANDEAYYAVMKGVMLFTPEAEKLMLTEDYFSARRQIRLCAPDLKRRNETRRHPMPVLKLY
Ga0245310_104346	Ga0245310_1043466	F055775	MAQIAQQDNLVIEVTTTAAALDGAIKKKLIECIEGGTITDVILVTKEVEKKISHARVISWLVDTTGDSPKYTIHIINANSGAVSAIALN
Ga0245310_109874	Ga0245310_1098742	F105374	MKKRVTLLVALCIWKVVAAQTPYGEMPERFRPDTLPCRLGGGVCFGMDGLDAAIPRGEGASSCRDPRVVFVAGDTLITFISVAGVADTALGDPVCRFYGRNVARVVSRTRRMTGGRMGAADNDFPDDPDFAELQGVVIENQRYPWESYAAGDSAYRLPVARSLVGGKEDPLLGSDMRRRYVRLLTEVSVELKAGGTRPFVHVVYLLPDP
Ga0245310_110001	Ga0245310_1100011	F059106	LLQIFVWIVDLKVRERLTEYLKKDIRYHQVIIEVLV
Ga0245310_111128	Ga0245310_1111281	F070093	FCPFRIDPPMEPEQERLFKLYSGSGIHSLPELNPKSI
Ga0245310_114914	Ga0245310_1149143	F056309	VKGTKRTCLRRMPSLSVVPLLLGDSDSLSVSYGMEPEQEALSIVSFKD
Ga0245310_118979	Ga0245310_1189792	F070093	VSNFESLLLAEFCPFRIDPPMEPEQERLFKLYSGSGIQSLPELNSKLNPNLFQRI
Ga0245310_142901	Ga0245310_1429011	F029444	MEVSEQLTGFELEDLMSWTVSNLQRPFREDFSLKKSGIIAEKESQIFGRRFVGF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300029861: Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37399

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences