Sample 3300027207

Overview

Basic Information
IMG/M Taxon OID	3300027207 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0099541 \| Gp0056852 \| Ga0208946
Sample Name	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C49A8_80 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	288326688
Sequencing Scaffolds	31
Novel Protein Genes	34
Associated Families	33

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Predicted Viral	3
Not Available	14
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
All Organisms → Viruses	1
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED264	2
All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Archaeal Communities From Monterey Bay, Ca, That Are Ammonia-Oxidizing
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine → Marine Archaeal Communities From Monterey Bay, Ca, That Are Ammonia-Oxidizing

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → intertidal zone → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Monterey Bay, California, USA
Coordinates	Lat. (^o)	36.25	Long. (^o)	-122.2099	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Family	Category	Number of Sequences	3D Structure?
F000245	Metagenome / Metatranscriptome	1468	Y
F000711	Metagenome / Metatranscriptome	925	Y
F001334	Metagenome / Metatranscriptome	720	Y
F003285	Metagenome / Metatranscriptome	496	Y
F005429	Metagenome / Metatranscriptome	401	Y
F007770	Metagenome	345	Y
F007946	Metagenome / Metatranscriptome	342	Y
F011338	Metagenome / Metatranscriptome	292	N
F011529	Metagenome / Metatranscriptome	290	Y
F013358	Metagenome / Metatranscriptome	272	N
F015654	Metagenome / Metatranscriptome	253	N
F016284	Metagenome / Metatranscriptome	248	Y
F016590	Metagenome	246	Y
F016978	Metagenome	243	Y
F019388	Metagenome / Metatranscriptome	230	N
F022427	Metagenome / Metatranscriptome	214	N
F031152	Metagenome	183	N
F039679	Metagenome	163	Y
F043616	Metagenome / Metatranscriptome	156	Y
F044141	Metagenome	155	N
F045374	Metagenome / Metatranscriptome	153	Y
F046469	Metagenome	151	Y
F051448	Metagenome / Metatranscriptome	144	N
F052646	Metagenome / Metatranscriptome	142	Y
F063067	Metagenome / Metatranscriptome	130	Y
F065937	Metagenome / Metatranscriptome	127	N
F069327	Metagenome / Metatranscriptome	124	Y
F093970	Metagenome / Metatranscriptome	106	Y
F095059	Metagenome / Metatranscriptome	105	Y
F096657	Metagenome / Metatranscriptome	104	N
F100059	Metagenome / Metatranscriptome	103	Y
F105348	Metagenome / Metatranscriptome	100	N
F105359	Metagenome	100	N

Family

Category

Number of Sequences

3D Structure?

F000245

Metagenome / Metatranscriptome

1468

F000711

Metagenome / Metatranscriptome

925

F001334

Metagenome / Metatranscriptome

720

F003285

Metagenome / Metatranscriptome

496

F005429

Metagenome / Metatranscriptome

401

F007770

Metagenome

345

F007946

Metagenome / Metatranscriptome

342

F011338

Metagenome / Metatranscriptome

292

F011529

Metagenome / Metatranscriptome

290

F013358

Metagenome / Metatranscriptome

272

F015654

Metagenome / Metatranscriptome

253

F016284

Metagenome / Metatranscriptome

248

F016590

Metagenome

246

F016978

Metagenome

243

F019388

Metagenome / Metatranscriptome

230

F022427

Metagenome / Metatranscriptome

214

F031152

Metagenome

183

F039679

Metagenome

163

F043616

Metagenome / Metatranscriptome

156

F044141

Metagenome

155

F045374

Metagenome / Metatranscriptome

153

F046469

Metagenome

151

F051448

Metagenome / Metatranscriptome

144

F052646

Metagenome / Metatranscriptome

142

F063067

Metagenome / Metatranscriptome

130

F065937

Metagenome / Metatranscriptome

127

F069327

Metagenome / Metatranscriptome

124

F093970

Metagenome / Metatranscriptome

106

F095059

Metagenome / Metatranscriptome

105

F096657

Metagenome / Metatranscriptome

104

F100059

Metagenome / Metatranscriptome

103

F105348

Metagenome / Metatranscriptome

100

F105359

Metagenome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0208946_1008536	All Organisms → Viruses → Predicted Viral	3414	Open in IMG/M
Ga0208946_1013250	All Organisms → Viruses → Predicted Viral	2834	Open in IMG/M
Ga0208946_1018776	Not Available	2398	Open in IMG/M
Ga0208946_1018887	All Organisms → Viruses → Predicted Viral	2391	Open in IMG/M
Ga0208946_1026730	Not Available	2004	Open in IMG/M
Ga0208946_1030801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1851	Open in IMG/M
Ga0208946_1036815	All Organisms → Viruses	1666	Open in IMG/M
Ga0208946_1037963	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
Ga0208946_1043513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1501	Open in IMG/M
Ga0208946_1046106	Not Available	1445	Open in IMG/M
Ga0208946_1058943	Not Available	1220	Open in IMG/M
Ga0208946_1071760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1055	Open in IMG/M
Ga0208946_1074064	Not Available	1029	Open in IMG/M
Ga0208946_1085469	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	918	Open in IMG/M
Ga0208946_1091962	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED264	865	Open in IMG/M
Ga0208946_1102680	Not Available	786	Open in IMG/M
Ga0208946_1105748	Not Available	765	Open in IMG/M
Ga0208946_1112391	Not Available	724	Open in IMG/M
Ga0208946_1117282	Not Available	697	Open in IMG/M
Ga0208946_1118546	Not Available	690	Open in IMG/M
Ga0208946_1120911	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	678	Open in IMG/M
Ga0208946_1129019	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
Ga0208946_1130401	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED264	632	Open in IMG/M
Ga0208946_1132409	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	623	Open in IMG/M
Ga0208946_1132686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	622	Open in IMG/M
Ga0208946_1136227	Not Available	607	Open in IMG/M
Ga0208946_1142630	Not Available	579	Open in IMG/M
Ga0208946_1150632	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	547	Open in IMG/M
Ga0208946_1153810	Not Available	535	Open in IMG/M
Ga0208946_1158585	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	518	Open in IMG/M
Ga0208946_1162937	Not Available	504	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0208946_1008536

All Organisms → Viruses → Predicted Viral

3414

Open in IMG/M

Ga0208946_1013250

All Organisms → Viruses → Predicted Viral

2834

Open in IMG/M

Ga0208946_1018776

Not Available

2398

Open in IMG/M

Ga0208946_1018887

All Organisms → Viruses → Predicted Viral

2391

Open in IMG/M

Ga0208946_1026730

Not Available

2004

Open in IMG/M

Ga0208946_1030801

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium

1851

Open in IMG/M

Ga0208946_1036815

All Organisms → Viruses

1666

Open in IMG/M

Ga0208946_1037963

All Organisms → cellular organisms → Bacteria

1635

Open in IMG/M

Ga0208946_1043513

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique

1501

Open in IMG/M

Ga0208946_1046106

Not Available

1445

Open in IMG/M

Ga0208946_1058943

Not Available

1220

Open in IMG/M

Ga0208946_1071760

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter

1055

Open in IMG/M

Ga0208946_1074064

Not Available

1029

Open in IMG/M

Ga0208946_1085469

All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote

918

Open in IMG/M

Ga0208946_1091962

All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED264

865

Open in IMG/M

Ga0208946_1102680

Not Available

786

Open in IMG/M

Ga0208946_1105748

Not Available

765

Open in IMG/M

Ga0208946_1112391

Not Available

724

Open in IMG/M

Ga0208946_1117282

Not Available

697

Open in IMG/M

Ga0208946_1118546

Not Available

690

Open in IMG/M

Ga0208946_1120911

All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon

678

Open in IMG/M

Ga0208946_1129019

All Organisms → cellular organisms → Bacteria

638

Open in IMG/M

Ga0208946_1130401

All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED264

632

Open in IMG/M

Ga0208946_1132409

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M

623

Open in IMG/M

Ga0208946_1132686

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium

622

Open in IMG/M

Ga0208946_1136227

Not Available

607

Open in IMG/M

Ga0208946_1142630

Not Available

579

Open in IMG/M

Ga0208946_1150632

All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon

547

Open in IMG/M

Ga0208946_1153810

Not Available

535

Open in IMG/M

Ga0208946_1158585

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45

518

Open in IMG/M

Ga0208946_1162937

Not Available

504

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0208946_1008536	Ga0208946_10085367	F105359	MNNIDKIAKLIATLDNDGLNKIIPIFKQHRKTLAHATKLDLRVGMKVSWGAMAHGTIDKINRTKCVCTRNDGQKWTVPITMMRVQ
Ga0208946_1013250	Ga0208946_10132504	F007946	MSTKDLIDNIKKGDAMKSNNTFNSIMHDKIIDALDNHKQEVASKLYGATNDAPVAEEPAVETPEGEEATDVEV
Ga0208946_1018776	Ga0208946_10187769	F046469	MNMEYLAVALLSCLVGACGMNQKHEAIQGEMPFVQGTPTKVLLQDMPELINTPTDGEGNPVKITVAVYKFPDV
Ga0208946_1018887	Ga0208946_10188872	F013358	MSIRPKSVCDSCSATYIIVHELPEDMYTEQYCPFCGEEHEDIEEDVLLNEDWD
Ga0208946_1026730	Ga0208946_10267303	F022427	TILGQTSSGLAGAGGTYDIDQTSTGTINLDVNGASANVSIEQTSSGTVHIDAAGSAFTADIDQDNASTLSLHHDGASADYVILQTGGSGDILTLTVNGASANVDIIQRD
Ga0208946_1030801	Ga0208946_10308012	F011529	MRWNKFTIDARGLKGIRLRSCKLWLDDTGFHPFLDPDEMIRPDMQKSMGVAFDELPKEAWDVMDRYDWEKAKRSKYATGN
Ga0208946_1036815	Ga0208946_10368153	F015654	MKRFFKEVYITGHGKEDKNTFNTFKDTKFYKVNAEKVEELKDCDNVKYITFDEIKI
Ga0208946_1037963	Ga0208946_10379633	F105348	MKIGVILGRGVEGVGVTKNVVEFQKLFPGVEIFATMDKLWPRRESMNFPVTYFRGADWDMVSKPAKKFPNLIACNDVVHRINQLDACIVWSIPSKSHSEECI
Ga0208946_1043513	Ga0208946_10435133	F095059	SNGEPGGKVNGNGFELVTTVCVVEILTTDGINLSARSAKDAGTVFELDXIEKLRVKINVKIISLIFFILTFNIINNYKS
Ga0208946_1046106	Ga0208946_10461064	F019388	MRTEQNPYLVETKNGQILKFSKIDADNEAVIKQLDGNDVEVYHDGKLQYKLHGVEQGKL
Ga0208946_1058943	Ga0208946_10589433	F051448	MMKKGEKSMFKPSIKNKLIDIDYEDKNVKIAHYYNKKDEHGLPMHNGLVYVYTFDEYYEDWKVHAILDFDFVSYKWRYGSSFFDSYEEIAKYWAEKMFLPPREFVSKKDKERMEMDSLINAHICEMS
Ga0208946_1071760	Ga0208946_10717603	F100059	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVHGNFFYGSKS
Ga0208946_1074064	Ga0208946_10740641	F063067	KAWNYLGKSIGGKEKSLIIKDYIDGMEKIMKKHSKVLGSLLTDYTKKRIQEPDPDSGDRPMWDELVVNNFKIKKVHIGQEFGEDFQDDDDIEGFPFELYTDNGDLADYINRTVANIKL
Ga0208946_1074064	Ga0208946_10740642	F016590	MIRFKQYLKEFAVQSTSDYVFNVPSGHSGGLKIPISGPMFKRIWPDTIRSTVFHVTDHAGLARLKKLEGGKKTISAFFSMMSRYMESGVATSGGVVVEMDADVVVSASSDIMSEVDKTGRRWVEMSWFANAQRYGTGPAFDKVEKDLNTLIVGLVKKHLPKGKEVQQTKHFGKDQGAAFDIWSNMKHHLKGDGRILRVVIKDYFDGVEKIIKKHKKVMGNIFYGY
Ga0208946_1085469	Ga0208946_10854692	F005429	MRTETVDEYLKRGGTVTQIPEVLDTVGSWWGYQERYQAESVKEGTQQVVSWKSVQPDERFDTEDDDRKYWNKLDKRCDALLKKLK
Ga0208946_1091381	Ga0208946_10913813	F000245	MRTFKEYSLERKLDKYVSDEIKKRKLARHPVNATDDYKMKKGKPAFKFPSPTGEMMIHVWLRPMAKPASKDTKAFNYQLEDK
Ga0208946_1091962	Ga0208946_10919621	F003285	PDQESFLQLKSEIQTLKIKDEYRSKELDALMSKLDDTSSKLNTLSDNISRLLAGQEIHKTNDNEVRDELKILHTRIGDLHDKCSEMIDKTETRISSDISLLYKKVDSLEKWRWITIGVATALTFFIGHILPKFLNN
Ga0208946_1102680	Ga0208946_11026801	F043616	MAISNVKVVNTASKYIVKSKGIGSETNQVLVNANDLTGGTNKSLVSLIECYYIIESVGSVEGKLTIS
Ga0208946_1105748	Ga0208946_11057482	F000711	METINEPNHPTDYRLVKLMDGSILMGTISVDEQHMRIENPLELTTIPRMTEFGLKEDTTLAKWIPFTSDKEFVITKDKVVVISLATVELAHFYEVVLNKIQTDSLQNRAPLTTEDIDRILSIAEEMDSEYIRDDEPN
Ga0208946_1108201	Ga0208946_11082012	F093970	KNKDKPIKNERLTKVLVSLLNSDLNFFISNNKTNGVMAKKPIKNLTALNVNGPILSIPVSXAIKVVPQIKVHSNALNKEIVFDIT
Ga0208946_1112391	Ga0208946_11123912	F065937	MFKKLLVATAAMAISATSFAGISLSGLYEGTLDSHGTYAQDIHTTMKGTAGASSVTVVLDKDFSVDDMWVESTAGVLTLKIGDWSGDDPDVTKIGVTTTVGAYTVGLSQESGGSTEVDASGTIGGIAVAMTNVTNE
Ga0208946_1117282	Ga0208946_11172821	F045374	ECNSEPFQVTVKEELGFDNEAIELGLEVTHCPFCGANLEWAQRGGYDASEYDNDEDRLDV
Ga0208946_1118546	Ga0208946_11185462	F044141	MKKRIKSKHQHHEEVIRQLIEEEIFQDKNVFFEKKLQEATEKYLKRIDYLVGANNELMRELTLCEQELTHATITVQKDCVSIPNKVADCIVLEENF
Ga0208946_1120911	Ga0208946_11209111	F052646	MKKLLLIGLCLLFLLGNKPVTETPQETTVPLSEILLYCNTPEFVRNMAENDYMLGLAASGVINDDKHRMLLSMELLMNPRNKQWAIIFNYAKGNLSCIVGGNRIELYKPKN
Ga0208946_1129019	Ga0208946_11290193	F039679	MKAENADTLEHDGSHLTIRDDLVAEGLSVPVHFLDYKEDTHVEQTDTLNIDCIFSTDGEELYEGMGIIVRITDPTRTDKYGE
Ga0208946_1130401	Ga0208946_11304012	F001334	MMKFKEYLQLNADDSIEQVMDGEWILKSRSSWKATDDEDNKLEIHNDGHDPELQGESWSVHTNTFAPKAFAFFCKQFIKEAK
Ga0208946_1132409	Ga0208946_11324091	F016978	MHNGIEPFAKFKVGDKIRGRDSTGIVDGQPGIVRDVHTSYPTSDDYEDLTNPGIVYEVSFMKGTFLLKDYQMDLLGKQQLFNFMYD
Ga0208946_1132686	Ga0208946_11326862	F069327	MERWDEREKTIDGDTPEEIIEDFEVAKVAVNCYQHKKEHFLIGLDLISEGKRIDEQLDFWESRLEKLCRENYQLLKSKGKDVDEIMDFFSEKTKDKLK
Ga0208946_1136227	Ga0208946_11362271	F031152	MTNKEKVTSFARNGYDDMPERKAFRKMMYRDESFKNWIKDYFQLNMEDGPFKIIEDPLGEYQVDLGMVDSSDNIVGLIEVDVFFSWKDKWPSYYKWCHRLGRKTKYWINNSYPYINVTFNTKHNDAIVTTREIESQYPIIDKWFNDKKMT
Ga0208946_1142630	Ga0208946_11426301	F096657	KKVMKNPAIISILLFFMVAQVHAVLPPNDLELENGECPSIKLKIVAKTMEPLKAKKGHSYFDLTVSSRHIGLVNGKIKEIRLVDSSNKETSLAFKKKSKTLSSSTFIIADKQIKGARLIITYHSKSHAIGSFLGRLIGVGGPGPDAYTIYIIPLDTLTDFKKET
Ga0208946_1150632	Ga0208946_11506321	F016284	INMTSKTLRDMRKELLDKYSEKMTGYEHLDDGTGDYARTISKDSEKESEETSEKT
Ga0208946_1153810	Ga0208946_11538102	F011529	VWIKESKRKTISELEGIRLRSARLWLDKDGFHPFLDQNTLIKPDLQKSMGCKYNELPKEAWDVMDKYDEALAKGSIYATXDKR
Ga0208946_1158585	Ga0208946_11585851	F007770	ASPVTKQMKWYGNDHSVEIMEHGDEELAKWQREAVAIKDTFKFTISVYESWHEDADLYESHDREDSFVSLARKFAEDNAVLYFPEGFPAEWIEQWFDDNNEKHWNHYIVQPDDKNIDKICKVWHSYGIAQIKDDSKELWYQVRDKVKQLMEKHNNYDYAI
Ga0208946_1162937	Ga0208946_11629371	F011338	LNSYEVRGVSVRNGYAYGGPRVKNLSTYAFSAFAANNAITLEGGTGDGEILLENESGVLQHPQSDSWSTTVADWNTLRFTGTLNSNVDGETMRLSDINGTKSSQNHRINFAFPTEVTKSA

Scaffold ID

Protein ID

Family

Sequence

Ga0208946_1008536

Ga0208946_10085367

F105359

MNNIDKIAKLIATLDNDGLNKIIPIFKQHRKTLAHATKLDLRVGMKVSWGAMAHGTIDKINRTKCVCTRNDGQKWTVPITMMRVQ

Ga0208946_1013250

Ga0208946_10132504

F007946

MSTKDLIDNIKKGDAMKSNNTFNSIMHDKIIDALDNHKQEVASKLYGATNDAPVAEEPAVETPEGEEATDVEV

Ga0208946_1018776

Ga0208946_10187769

F046469

MNMEYLAVALLSCLVGACGMNQKHEAIQGEMPFVQGTPTKVLLQDMPELINTPTDGEGNPVKITVAVYKFPDV

Ga0208946_1018887

Ga0208946_10188872

F013358

MSIRPKSVCDSCSATYIIVHELPEDMYTEQYCPFCGEEHEDIEEDVLLNEDWD

Ga0208946_1026730

Ga0208946_10267303

F022427

TILGQTSSGLAGAGGTYDIDQTSTGTINLDVNGASANVSIEQTSSGTVHIDAAGSAFTADIDQDNASTLSLHHDGASADYVILQTGGSGDILTLTVNGASANVDIIQRD

Ga0208946_1030801

Ga0208946_10308012

F011529

MRWNKFTIDARGLKGIRLRSCKLWLDDTGFHPFLDPDEMIRPDMQKSMGVAFDELPKEAWDVMDRYDWEKAKRSKYATGN

Ga0208946_1036815

Ga0208946_10368153

F015654

MKRFFKEVYITGHGKEDKNTFNTFKDTKFYKVNAEKVEELKDCDNVKYITFDEIKI

Ga0208946_1037963

Ga0208946_10379633

F105348

MKIGVILGRGVEGVGVTKNVVEFQKLFPGVEIFATMDKLWPRRESMNFPVTYFRGADWDMVSKPAKKFPNLIACNDVVHRINQLDACIVWSIPSKSHSEECI

Ga0208946_1043513

Ga0208946_10435133

F095059

SNGEPGGKVNGNGFELVTTVCVVEILTTDGINLSARSAKDAGTVFELDXIEKLRVKINVKIISLIFFILTFNIINNYKS

Ga0208946_1046106

Ga0208946_10461064

F019388

MRTEQNPYLVETKNGQILKFSKIDADNEAVIKQLDGNDVEVYHDGKLQYKLHGVEQGKL

Ga0208946_1058943

Ga0208946_10589433

F051448

MMKKGEKSMFKPSIKNKLIDIDYEDKNVKIAHYYNKKDEHGLPMHNGLVYVYTFDEYYEDWKVHAILDFDFVSYKWRYGSSFFDSYEEIAKYWAEKMFLPPREFVSKKDKERMEMDSLINAHICEMS

Ga0208946_1071760

Ga0208946_10717603

F100059

MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVHGNFFYGSKS

Ga0208946_1074064

Ga0208946_10740641

F063067

KAWNYLGKSIGGKEKSLIIKDYIDGMEKIMKKHSKVLGSLLTDYTKKRIQEPDPDSGDRPMWDELVVNNFKIKKVHIGQEFGEDFQDDDDIEGFPFELYTDNGDLADYINRTVANIKL

Ga0208946_1074064

Ga0208946_10740642

F016590

MIRFKQYLKEFAVQSTSDYVFNVPSGHSGGLKIPISGPMFKRIWPDTIRSTVFHVTDHAGLARLKKLEGGKKTISAFFSMMSRYMESGVATSGGVVVEMDADVVVSASSDIMSEVDKTGRRWVEMSWFANAQRYGTGPAFDKVEKDLNTLIVGLVKKHLPKGKEVQQTKHFGKDQGAAFDIWSNMKHHLKGDGRILRVVIKDYFDGVEKIIKKHKKVMGNIFYGY

Ga0208946_1085469

Ga0208946_10854692

F005429

MRTETVDEYLKRGGTVTQIPEVLDTVGSWWGYQERYQAESVKEGTQQVVSWKSVQPDERFDTEDDDRKYWNKLDKRCDALLKKLK

Ga0208946_1091381

Ga0208946_10913813

F000245

MRTFKEYSLERKLDKYVSDEIKKRKLARHPVNATDDYKMKKGKPAFKFPSPTGEMMIHVWLRPMAKPASKDTKAFNYQLEDK

Ga0208946_1091962

Ga0208946_10919621

F003285

PDQESFLQLKSEIQTLKIKDEYRSKELDALMSKLDDTSSKLNTLSDNISRLLAGQEIHKTNDNEVRDELKILHTRIGDLHDKCSEMIDKTETRISSDISLLYKKVDSLEKWRWITIGVATALTFFIGHILPKFLNN

Ga0208946_1102680

Ga0208946_11026801

F043616

MAISNVKVVNTASKYIVKSKGIGSETNQVLVNANDLTGGTNKSLVSLIECYYIIESVGSVEGKLTIS

Ga0208946_1105748

Ga0208946_11057482

F000711

METINEPNHPTDYRLVKLMDGSILMGTISVDEQHMRIENPLELTTIPRMTEFGLKEDTTLAKWIPFTSDKEFVITKDKVVVISLATVELAHFYEVVLNKIQTDSLQNRAPLTTEDIDRILSIAEEMDSEYIRDDEPN

Ga0208946_1108201

Ga0208946_11082012

F093970

KNKDKPIKNERLTKVLVSLLNSDLNFFISNNKTNGVMAKKPIKNLTALNVNGPILSIPVSXAIKVVPQIKVHSNALNKEIVFDIT

Ga0208946_1112391

Ga0208946_11123912

F065937

MFKKLLVATAAMAISATSFAGISLSGLYEGTLDSHGTYAQDIHTTMKGTAGASSVTVVLDKDFSVDDMWVESTAGVLTLKIGDWSGDDPDVTKIGVTTTVGAYTVGLSQESGGSTEVDASGTIGGIAVAMTNVTNE

Ga0208946_1117282

Ga0208946_11172821

F045374

ECNSEPFQVTVKEELGFDNEAIELGLEVTHCPFCGANLEWAQRGGYDASEYDNDEDRLDV

Ga0208946_1118546

Ga0208946_11185462

F044141

MKKRIKSKHQHHEEVIRQLIEEEIFQDKNVFFEKKLQEATEKYLKRIDYLVGANNELMRELTLCEQELTHATITVQKDCVSIPNKVADCIVLEENF

Ga0208946_1120911

Ga0208946_11209111

F052646

MKKLLLIGLCLLFLLGNKPVTETPQETTVPLSEILLYCNTPEFVRNMAENDYMLGLAASGVINDDKHRMLLSMELLMNPRNKQWAIIFNYAKGNLSCIVGGNRIELYKPKN

Ga0208946_1129019

Ga0208946_11290193

F039679

MKAENADTLEHDGSHLTIRDDLVAEGLSVPVHFLDYKEDTHVEQTDTLNIDCIFSTDGEELYEGMGIIVRITDPTRTDKYGE

Ga0208946_1130401

Ga0208946_11304012

F001334

MMKFKEYLQLNADDSIEQVMDGEWILKSRSSWKATDDEDNKLEIHNDGHDPELQGESWSVHTNTFAPKAFAFFCKQFIKEAK

Ga0208946_1132409

Ga0208946_11324091

F016978

MHNGIEPFAKFKVGDKIRGRDSTGIVDGQPGIVRDVHTSYPTSDDYEDLTNPGIVYEVSFMKGTFLLKDYQMDLLGKQQLFNFMYD

Ga0208946_1132686

Ga0208946_11326862

F069327

MERWDEREKTIDGDTPEEIIEDFEVAKVAVNCYQHKKEHFLIGLDLISEGKRIDEQLDFWESRLEKLCRENYQLLKSKGKDVDEIMDFFSEKTKDKLK

Ga0208946_1136227

Ga0208946_11362271

F031152

MTNKEKVTSFARNGYDDMPERKAFRKMMYRDESFKNWIKDYFQLNMEDGPFKIIEDPLGEYQVDLGMVDSSDNIVGLIEVDVFFSWKDKWPSYYKWCHRLGRKTKYWINNSYPYINVTFNTKHNDAIVTTREIESQYPIIDKWFNDKKMT

Ga0208946_1142630

Ga0208946_11426301

F096657

KKVMKNPAIISILLFFMVAQVHAVLPPNDLELENGECPSIKLKIVAKTMEPLKAKKGHSYFDLTVSSRHIGLVNGKIKEIRLVDSSNKETSLAFKKKSKTLSSSTFIIADKQIKGARLIITYHSKSHAIGSFLGRLIGVGGPGPDAYTIYIIPLDTLTDFKKET

Ga0208946_1150632

Ga0208946_11506321

F016284

INMTSKTLRDMRKELLDKYSEKMTGYEHLDDGTGDYARTISKDSEKESEETSEKT

Ga0208946_1153810

Ga0208946_11538102

F011529

VWIKESKRKTISELEGIRLRSARLWLDKDGFHPFLDQNTLIKPDLQKSMGCKYNELPKEAWDVMDKYDEALAKGSIYATXDKR

Ga0208946_1158585

Ga0208946_11585851

F007770

ASPVTKQMKWYGNDHSVEIMEHGDEELAKWQREAVAIKDTFKFTISVYESWHEDADLYESHDREDSFVSLARKFAEDNAVLYFPEGFPAEWIEQWFDDNNEKHWNHYIVQPDDKNIDKICKVWHSYGIAQIKDDSKELWYQVRDKVKQLMEKHNNYDYAI

Ga0208946_1162937

Ga0208946_11629371

F011338

LNSYEVRGVSVRNGYAYGGPRVKNLSTYAFSAFAANNAITLEGGTGDGEILLENESGVLQHPQSDSWSTTVADWNTLRFTGTLNSNVDGETMRLSDINGTKSSQNHRINFAFPTEVTKSA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300027207: Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C49A8_80 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences