Metagenome / Metatranscriptome Family F095059

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095059
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	68 residues
Representative Sequence	TVCVVEILTTEGINLSARSAKDAGTDFEFDXIEKLKAKINVKITNLIFFILTFNIINNYKSYYCKN
Number of Associated Samples	92
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (19.048 % of family members)
Environment Ontology (ENVO)	Unclassified (60.952 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (87.619 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01145	Band_7	40.95
PF09838	DUF2065	31.43
PF12221	HflK_N	2.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.67 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.71 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	65.71 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	54.29 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	54.29 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	31.43 %
Unclassified	root	N/A	31.43 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001352\|JGI20157J14317_10133728	Not Available	806	Open in IMG/M
3300003586\|JGI26261J51718_1039033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	1051	Open in IMG/M
3300005239\|Ga0073579_1158893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	1082	Open in IMG/M
3300005522\|Ga0066861_10041938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1634	Open in IMG/M
3300005523\|Ga0066865_10395843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	525	Open in IMG/M
3300006867\|Ga0075476_10303779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	559	Open in IMG/M
3300009071\|Ga0115566_10579574	Not Available	630	Open in IMG/M
3300009077\|Ga0115552_1438545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	514	Open in IMG/M
3300009443\|Ga0115557_1264523	Not Available	655	Open in IMG/M
3300009476\|Ga0115555_1079956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1424	Open in IMG/M
3300009790\|Ga0115012_11568559	Not Available	569	Open in IMG/M
3300016741\|Ga0182079_1528669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	903	Open in IMG/M
3300016743\|Ga0182083_1702359	Not Available	609	Open in IMG/M
3300017710\|Ga0181403_1027309	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300017714\|Ga0181412_1152559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	519	Open in IMG/M
3300017717\|Ga0181404_1130094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	612	Open in IMG/M
3300017725\|Ga0181398_1097462	Not Available	702	Open in IMG/M
3300017727\|Ga0181401_1067519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	949	Open in IMG/M
3300017731\|Ga0181416_1188003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	500	Open in IMG/M
3300017745\|Ga0181427_1115374	Not Available	656	Open in IMG/M
3300017745\|Ga0181427_1155603	Not Available	553	Open in IMG/M
3300017749\|Ga0181392_1105180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	841	Open in IMG/M
3300017763\|Ga0181410_1197456	Not Available	552	Open in IMG/M
3300017765\|Ga0181413_1119259	Not Available	800	Open in IMG/M
3300017776\|Ga0181394_1152458	Not Available	718	Open in IMG/M
3300017776\|Ga0181394_1257030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	522	Open in IMG/M
3300017786\|Ga0181424_10261806	Not Available	722	Open in IMG/M
3300017818\|Ga0181565_10558121	Not Available	738	Open in IMG/M
3300017950\|Ga0181607_10462556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	683	Open in IMG/M
3300017951\|Ga0181577_10247607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1173	Open in IMG/M
3300017957\|Ga0181571_10144142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1573	Open in IMG/M
3300017957\|Ga0181571_10144305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1572	Open in IMG/M
3300019276\|Ga0182067_1264940	Not Available	519	Open in IMG/M
3300019277\|Ga0182081_1090703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	959	Open in IMG/M
3300019282\|Ga0182075_1862091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	957	Open in IMG/M
3300020053\|Ga0181595_10251997	Not Available	746	Open in IMG/M
3300020175\|Ga0206124_10026291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2784	Open in IMG/M
3300020185\|Ga0206131_10359586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	624	Open in IMG/M
3300020385\|Ga0211677_10161276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	946	Open in IMG/M
3300020388\|Ga0211678_10062108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1722	Open in IMG/M
3300020413\|Ga0211516_10087989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1501	Open in IMG/M
3300020413\|Ga0211516_10193490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	937	Open in IMG/M
3300020438\|Ga0211576_10337882	Not Available	778	Open in IMG/M
3300020452\|Ga0211545_10314399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	715	Open in IMG/M
3300020460\|Ga0211486_10289598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	707	Open in IMG/M
3300020462\|Ga0211546_10494019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	617	Open in IMG/M
3300020468\|Ga0211475_10096060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1550	Open in IMG/M
3300020469\|Ga0211577_10074856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2395	Open in IMG/M
3300020475\|Ga0211541_10396407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	675	Open in IMG/M
3300020595\|Ga0206126_10386262	Not Available	619	Open in IMG/M
3300021169\|Ga0206687_1711642	Not Available	722	Open in IMG/M
3300021364\|Ga0213859_10250353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	810	Open in IMG/M
3300021364\|Ga0213859_10257183	Not Available	798	Open in IMG/M
3300021365\|Ga0206123_10388305	Not Available	576	Open in IMG/M
3300021378\|Ga0213861_10307697	Not Available	811	Open in IMG/M
3300021378\|Ga0213861_10478674	Not Available	595	Open in IMG/M
3300021389\|Ga0213868_10209561	All Organisms → cellular organisms → Bacteria → Proteobacteria	1163	Open in IMG/M
3300021389\|Ga0213868_10350976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	829	Open in IMG/M
3300021964\|Ga0222719_10474818	Not Available	757	Open in IMG/M
3300022900\|Ga0255771_1030086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3372	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10333429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	579	Open in IMG/M
3300022925\|Ga0255773_10365582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	561	Open in IMG/M
3300023087\|Ga0255774_10039308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2932	Open in IMG/M
3300023087\|Ga0255774_10070174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2076	Open in IMG/M
3300023108\|Ga0255784_10021079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	4203	Open in IMG/M
3300023108\|Ga0255784_10256892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	890	Open in IMG/M
3300023108\|Ga0255784_10391525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	663	Open in IMG/M
3300024223\|Ga0228601_1058227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	540	Open in IMG/M
3300024230\|Ga0228638_1022536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1894	Open in IMG/M
3300024250\|Ga0228677_1119788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	520	Open in IMG/M
(restricted) 3300024260\|Ga0233441_1255279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	502	Open in IMG/M
(restricted) 3300024261\|Ga0233439_10249996	Not Available	784	Open in IMG/M
3300024267\|Ga0228623_1033302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	1056	Open in IMG/M
3300024301\|Ga0233451_10202283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	845	Open in IMG/M
3300024301\|Ga0233451_10394625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	501	Open in IMG/M
(restricted) 3300024302\|Ga0233449_1218025	Not Available	595	Open in IMG/M
(restricted) 3300024339\|Ga0233445_1118264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	846	Open in IMG/M
3300024344\|Ga0209992_10298605	Not Available	658	Open in IMG/M
3300025699\|Ga0209715_1047843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1855	Open in IMG/M
3300025707\|Ga0209667_1154035	Not Available	678	Open in IMG/M
3300025810\|Ga0208543_1027080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1445	Open in IMG/M
3300025830\|Ga0209832_1054989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1406	Open in IMG/M
3300025876\|Ga0209223_10456152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	531	Open in IMG/M
3300025886\|Ga0209632_10061560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2341	Open in IMG/M
3300025886\|Ga0209632_10429186	Not Available	622	Open in IMG/M
3300025894\|Ga0209335_10325033	Not Available	645	Open in IMG/M
3300026085\|Ga0208880_1021150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1385	Open in IMG/M
3300026201\|Ga0208127_1151886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	557	Open in IMG/M
3300026466\|Ga0247598_1045552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1233	Open in IMG/M
3300026479\|Ga0228622_1094919	Not Available	608	Open in IMG/M
3300026503\|Ga0247605_1108456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	676	Open in IMG/M
3300026511\|Ga0233395_1050578	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300027207\|Ga0208946_1043513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1501	Open in IMG/M
3300027582\|Ga0208971_1128457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	562	Open in IMG/M
3300027906\|Ga0209404_11281627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	505	Open in IMG/M
3300028127\|Ga0233401_1069283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	837	Open in IMG/M
3300028198\|Ga0257121_1182146	Not Available	683	Open in IMG/M
3300028416\|Ga0228614_1069383	Not Available	700	Open in IMG/M
3300031630\|Ga0308004_10134410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	1042	Open in IMG/M
3300031757\|Ga0315328_10420687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	774	Open in IMG/M
3300031766\|Ga0315322_10573230	Not Available	727	Open in IMG/M
3300031766\|Ga0315322_10939966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	522	Open in IMG/M
3300031773\|Ga0315332_10152565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1500	Open in IMG/M
3300032073\|Ga0315315_10865710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	818	Open in IMG/M
3300032134\|Ga0315339_1178867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	592	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	27.62%
Coastal	Environmental → Aquatic → Marine → Coastal	17.14%
Strait	Environmental → Aquatic → Marine → Strait	13.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.38%
Pelagic	Environmental → Aquatic → Marine → Pelagic	9.52%
Oceanic	Environmental → Aquatic → Marine → Oceanic	8.57%
Inlet	Environmental → Aquatic → Marine → Inlet	5.71%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.76%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.95%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	19.05%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	17.14%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	13.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.38%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	9.52%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	8.57%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	8.57%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.76%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	19.05%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	15.24%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	13.33%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.48%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.71%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	5.71%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	4.76%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.76%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	4.76%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	3.81%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	3.81%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.90%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.90%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.95%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.95%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.95%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.95%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300003586	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_135m_DNA	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005522	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300016741	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071410CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016743	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019276	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101413AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019277	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019282	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071407BT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020460	Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020468	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020475	Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021169	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022900	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023108	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG	Environmental	Open in IMG/M
3300024223	Seawater microbial communities from Monterey Bay, California, United States - 1D	Environmental	Open in IMG/M
3300024230	Seawater microbial communities from Monterey Bay, California, United States - 48D	Environmental	Open in IMG/M
3300024250	Seawater microbial communities from Monterey Bay, California, United States - 58D_r	Environmental	Open in IMG/M
3300024260 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_135_MG	Environmental	Open in IMG/M
3300024261 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_100_MG	Environmental	Open in IMG/M
3300024267	Seawater microbial communities from Monterey Bay, California, United States - 28D	Environmental	Open in IMG/M
3300024301	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504CT (spades assembly)	Environmental	Open in IMG/M
3300024302 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_200_MG	Environmental	Open in IMG/M
3300024339 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_100_MG	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300025699	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)	Environmental	Open in IMG/M
3300025707	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_165m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025830	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)	Environmental	Open in IMG/M
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300026085	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026201	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45 (SPAdes)	Environmental	Open in IMG/M
3300026466	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 70R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026479	Seawater microbial communities from Monterey Bay, California, United States - 26D	Environmental	Open in IMG/M
3300026503	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 91R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026511	Seawater microbial communities from Monterey Bay, California, United States - 27D	Environmental	Open in IMG/M
3300027207	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C49A8_80 (SPAdes)	Environmental	Open in IMG/M
3300027582	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_18_M0_10 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028127	Seawater microbial communities from Monterey Bay, California, United States - 49D	Environmental	Open in IMG/M
3300028198	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_100	Environmental	Open in IMG/M
3300028416	Seawater microbial communities from Monterey Bay, California, United States - 15D	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031766	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032134	Ammonia-oxidizing marine archaeal communities from Pacific Ocean, United States - ASW #17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20157J14317_101337281	3300001352	Pelagic Marine	VVEIFTTDGINLSARSANDAGTELEFEIVCKLKVKNNANNINLIFFILTFNIINNYKSYNCKN*
JGI26261J51718_10390331	3300003586	Marine	VEIFTTDGINLSARSANDAGTDFELDIEKPKVKTRVINIILILFILTLYIINNYKP
Ga0073579_11588932	3300005239	Marine	GNVNGRGLVFVTTVVVEIFTTDGINLSARSANDAGTELEFEMVCKLKVKNNANNINLIFFILTFNIINNYKSYNCKN
Ga0066861_100419383	3300005522	Marine	LSARSAKEAGTVFEFDIEKVKDKINVKITSLIFFILAFNIINNYKSYNCKN
Ga0066865_103958431	3300005523	Marine	SAKEAGTVFEFDIEKLKVKINETKISLILFILTLDKINNCKSYNCKY
Ga0075476_103037793	3300006867	Aqueous	GNVNGRGLVFVTTVVVEIFTTDGINLSARSANDAGTELEFEIVCKLKVKNNANNINLIFFILTFNIINNYKSYNCKN
Ga0115566_105795742	3300009071	Pelagic Marine	VTVCVVEILTTDGINFSAKSAKDAGTVFEFELIEKLKAKIIVKTINLNFFILTFNIINYYKTYNCKN*
Ga0115552_14385453	3300009077	Pelagic Marine	CVVEILTTDGINLSARSAKDAGTDCEFDNVEKLNIKINVKIIIFNLFILTFNIINN*
Ga0115557_12645231	3300009443	Pelagic Marine	EVVVTVCVVEILTTDGINLSARSAKDAGTDCEFDNVEKLNVKMNAKNKNLIFFMLTFNIINNNKSYNCKY*
Ga0115555_10799563	3300009476	Pelagic Marine	GFVVVVTVCVVEILTTDGINFSAKSAKDAGTVFEFELIEKLKNKTNVKTTNLNFFILTFNIINYYKTYNCKN*
Ga0115012_115685592	3300009790	Marine	VDVEIFTTDGINFSARSANDVGTVLEFDWIEKLKENIIVKNINFNFFILTFNKINNYKTYNCKNKST*
Ga0182079_15286692	3300016741	Salt Marsh	VEILTTDGINLSARSANDAGTVFEFDXIEKLKAKINVNIINLIFFTLSFNIINNYKS
Ga0182083_17023592	3300016743	Salt Marsh	PGGNXKGNGLDVVLTVXVVEMFTTDGINLSARSANEDGTDFEFDXTEKLNARINVKITSFNFFILTFYKINNYKSYNCKN
Ga0181403_10273091	3300017710	Seawater	ITTDGINLSARSANDAGTVFEFDXIEKLKAKINVKITNLIFFTLSFNIINNYKS
Ga0181412_11525593	3300017714	Seawater	GNXNGNGLVVVVTVCVVEILTTDGINLSARSANDAGTVFEFDXTEKLKAKTNVKITNLIFFILTFNIINNYKSYYCKN
Ga0181404_11300943	3300017717	Seawater	VVTVXVVEILTTYGINFSARSAKDAGTVFEFDXIDKLKVKIIVKNINLIFFILTFNIINYYKS
Ga0181398_10974622	3300017725	Seawater	VVVTVCVVEILTTDGINLSARSANDAGTVFEFDXTEKLKAKINVNITNLIFFILTFNIINNYKS
Ga0181401_10675192	3300017727	Seawater	TVCVVEILTTEGINLSARSAKDAGTDFEFDXIEKLKAKINVKITNLIFFILTFNIINNYKSYYCKN
Ga0181416_11880033	3300017731	Seawater	SSKGEPGGNVNGNGLVVVVTVCVVEIFTTDGINLSARSANDAGTVFEFDXIEKLKAKINVKIINLIFFILTFNIINNYKSYYCKD
Ga0181427_11153742	3300017745	Seawater	VVEILTTEGINLSARSANDAGTLFEFDXTDKLKAKINVNITNLIFFTLTFNIINNYKPYYCKN
Ga0181427_11556032	3300017745	Seawater	GGNXNGNGLVVVVTVXVVEILTTDGINLSARSANDAGTVFEFDXIEKLKAKINVKITNLIFFILTFNIINNYKSYYRKN
Ga0181392_11051802	3300017749	Seawater	GLVFVTTVWVVEIFTTEGINLSARSAKDAGTDFEFDNVDKLKVKNIAKNKNLIFFILTFNIINNYKTYYCKY
Ga0181410_11974562	3300017763	Seawater	VCVVEILTTDGINLSARSANDAGTELELDIVWKLKVKNNAKNINLIFFILTFYIINNYKSYNCKK
Ga0181413_11192592	3300017765	Seawater	GNGLVFVTTVCVVEILTTDGINLSARSANDAGTELEFDIVWKLKVKNNAKNINLIFFILTFYIINNYKSYNCKN
Ga0181394_11524582	3300017776	Seawater	GNXNGNGFEVVVIVCVVEILTTDGINLSARSAKDAGTVCEFDXIEKLKVSINTENKSFNLVILFFNIINNYKSYNCKK
Ga0181394_12570301	3300017776	Seawater	GFELVTTVCVVEILTTDGINLSARSANDAGTELEFDIVWKLKVKNNAKNINLIFFILTFYIINNYKSYNCKK
Ga0181424_102618062	3300017786	Seawater	LTTDGINLSAKSAKDAGTVFEFELIEKLKAKINVKITNLNFFILTFNIINYYKTYNYKN
Ga0181565_105581211	3300017818	Salt Marsh	ILTTDGINLSARSANDAGTVFEFDXIEKLKAKINVNITNLNFFTLSFNIINNYKS
Ga0181607_104625563	3300017950	Salt Marsh	GGNWKGNGLEFVTTVCVVDILTTDGINLSARSANDSGTVLEFDEDKLLNVNNSTRNIVLICFMLTFNIINNYKSQDCKY
Ga0181577_102476071	3300017951	Salt Marsh	FVTTVVDVEIFTTEGINFSARSANDAGTGLEFDCNEKLRENIIVKTINFNFFILTFNKINNHKTYNCKNKST
Ga0181571_101441424	3300017957	Salt Marsh	TDGINLSARSAKDAGTGLEFDCKEKLKEKIIVKNINFIFFMLTFNKINNYKTNYCKDKSTRS
Ga0181571_101443053	3300017957	Salt Marsh	TDGINLSARSAKDAGTGLEFDCKEKLKEKIIVKNINFIFFILTFNKINNYKTNYCKDKSPRS
Ga0182067_12649401	3300019276	Salt Marsh	TDGINLSARSANDAGTVFEFDXIEKLKAKINVNITNLIFFTLYFNIINNYKS
Ga0182081_10907032	3300019277	Salt Marsh	GNGLFVVVTVCVVEILTTDGINLSARSANDAGTVFEFDXIEKLKAKMNVNITNLIFFTLSFNIINNYKS
Ga0182075_18620913	3300019282	Salt Marsh	VTTVVDVEIFTTEGINFSARSANDAGTGLEFDCNEKLRENIIVKIINFNFFILTFNQINNHKTYNCKNKST
Ga0181595_102519971	3300020053	Salt Marsh	VEILTTDGINLSARSANDAGTVFEFDXIEKLKAKINVNITNLNFFTLSFNIINNYKS
Ga0206124_100262914	3300020175	Seawater	NVNGRGLVFVTTVXVVEIFTTDGINLSARSANDAGTELEFEIVCKLKVKNNANNINLIFFILTFNIINNYKSYNCKN
Ga0206131_103595863	3300020185	Seawater	NWNGNGLVVEVTVCVVEILTTDGINLSARSANDAGTVFEFDWIEKLNAKINVKIVSLIFFILTFNIINNYKSYNCKN
Ga0211677_101612762	3300020385	Marine	TVCVVDILTTDGINLSARSANDSGTVLEFDEDKLLNVNNSTRNIVLICFILTFSIINNYK
Ga0211678_100621083	3300020388	Marine	LSARSANDSGTVLEFDEDKLLKVNNSTRNIVLICFILTFSIINNYKS
Ga0211516_100879893	3300020413	Marine	GINLSARSAKDAGTELELDIVWKLKVKNNANNINLIFFILTFNIINYYKSYNCKNQPTKP
Ga0211516_101934901	3300020413	Marine	NGKGFGFVTIVXVVEIFTTDGINLSARSAKEDGIEFELDCEAKLIERTSVKNNNLIFFMLTFNIINNYKSYNSKN
Ga0211576_103378822	3300020438	Marine	TDGINLSARSAKDAGTVFEFDCIEKIKVKNIVKNINLIFFILTFNIINYYKS
Ga0211545_103143993	3300020452	Marine	SNGDPGGNXKGNELLFVTTVVVVVEIFTTDGINFSARSAKDKGIVFEFEFIEKLNDKITVNNKILIFFMLTFNIINSYKAYNCKNKSA
Ga0211486_102895981	3300020460	Marine	DVEIFTTEGINFSARSANDVGTGLEFDCNEKLKENIIVKIINFNFFILTFNKINNHKTYNCKNKST
Ga0211546_104940193	3300020462	Marine	PNSLNMSSNGDPGGKLKGKGLEFVTTVFEVEILTTDGINFSARSAKDSGTGFEFDCNEKPIDITIVKNINFNLFILTFNIINYYETYNRKYKSTCS
Ga0211475_100960603	3300020468	Marine	VVEIFTTEGINLSARSANDAGTELEFDIVWKLKVKNNAKNINLIFFILTFNIINNYKPYNCKN
Ga0211577_100748561	3300020469	Marine	LVFVTTVWVVEIFTTEGINLSARSAKDAGTDFEFDNVDKLKVKNIAKNKNLIFFILTFNIINNYKTYYCKY
Ga0211541_103964071	3300020475	Marine	VTTVCVVEIFTTDGINFSARSANDAGTELEFEFNVNPKVKTIAVNISLIFFILVFNKINNDKSYYCKNHTPRS
Ga0206126_103862622	3300020595	Seawater	FDVVVTVCVVEILTTDGINLSARSAKDAGTVFEFDXTEKLKAKTNVKIASLIFFILIFNIINNYKSYNCKN
Ga0206687_17116422	3300021169	Seawater	GFEVVVTVCVVEMLTTDGISFSARSANDAGTVFEFDXIEKLKAKINVKTTSLIFFILTFDIINNYKSYNCKN
Ga0213859_102503533	3300021364	Seawater	LLFVTTVVDVEIFTTEGINFSARSANDAGTGLEFDCNEKLKENIIVKIINFNFFILTFNKINNHKTYNCKNKST
Ga0213859_102571831	3300021364	Seawater	NISSKGEPGGNWNGNGLVVVVTVCVVEILTTDGINLSARSANDAGTVFEFDXIEKLKAKINVNITNLIFFTLSFNIINNYKS
Ga0206123_103883052	3300021365	Seawater	TTDGINLSARSANDAGTVFEFDWIEKLNAKINVKIVSLIFFILTFNIINNYKSYNCKN
Ga0213861_103076972	3300021378	Seawater	GFVVVVTVCVVEILTTDGINLSAKSAKDAGTVFEFELIEKLKTKINVKTINLNFFILTFNIINYYKPYNCKN
Ga0213861_104786741	3300021378	Seawater	INFSARSANDGGTDCELDNFEKLNVKINVKNINLIFFILTFDIINNYKSYNCKNQPTXS
Ga0213868_102095611	3300021389	Seawater	GGKVNGKGLVFVTTVCVVEIFTTEGINLSAKSAKDSGTDCEFDXTDKPKLMTNVKIINLIFFILILNIINNYKTQNCKN
Ga0213868_103509762	3300021389	Seawater	VCVVEILTTDGINLSARSANDAGTVFEFDXIEKLKAKTNVKIINLIFFTLSFNIINNYKS
Ga0222719_104748182	3300021964	Estuarine Water	LVVVVTVCVVEILTTDGINLSARSANDAGTVFEFDXIEKLKAKINVNITNLIFFTLSFNIINNYKS
Ga0255771_10300865	3300022900	Salt Marsh	VEILTTDGINLSARSANDAGTVFEFDXIEKLKAKINVNITNLIFFTLSFNIINNYKS
(restricted) Ga0233426_103334291	3300022920	Seawater	RSANDAGTVFEFDCIEKLNAKINVKIVSLIFFILTFNIINNYKSYNCKN
Ga0255773_103655823	3300022925	Salt Marsh	GKELLFVTTVVDVEIFTTEGINFSARSANDVGTGLEFDCNEKLKEKIIVKKINFNFFILTFNKINYHKTYNCKNKST
Ga0255774_100393084	3300023087	Salt Marsh	TDGINLSARSANDAGTVFEFDXIEKLKAKINVNITNLNFFTLSFNIINNYKS
Ga0255774_100701741	3300023087	Salt Marsh	NGEPGGNWNGNGLVVVVTVCVVEILTTDGINLSARSANDAGTVFEFDXIEKLKVKINVKITSLIFFILTFNKINNYKSYYCKN
Ga0255784_100210791	3300023108	Salt Marsh	GLLLVTTVVEVEIFTTDGINLSARSAKDAGTGLEFDCKEKLKEKIIVKNINFIFFILTFNKINNYKTNYCKDKSPRS
Ga0255784_102568921	3300023108	Salt Marsh	GLLLVTTVVEVEIFTTDGINLSARSAKDAGTGLEFDCKEKLKEKIIVKNINFIFFMLTFNKINNYKTNYCKDKSTRS
Ga0255784_103915251	3300023108	Salt Marsh	TEGINFSARSANDAGTGLEFDCNEKLKENIIVKIINFNFFILTFNKINNHKTYNCKNKST
Ga0228601_10582273	3300024223	Seawater	GNXNGNGLVVVVTVCVVEILTTDGINLSARSANDAGTVFELDXIEKPKVKISVKNINLIFSILTFNIINNYKSYNCKN
Ga0228638_10225363	3300024230	Seawater	EVVVTVCVVEILTTDGINLSARSAKDAGTDCEFDXIEKPQVSINTENKSFNLFILFFNIINNYKSYYCKY
Ga0228677_11197883	3300024250	Seawater	GNVKGNGLVFVTTVCVVEILTTDGINLSARSANDAGTELEFDIVWKLKVKNNAKNINLIFFILTFYIINNYKSYNCKK
(restricted) Ga0233441_12552791	3300024260	Seawater	EILTTDGINLSARSANDAGTVFEFDCIEKLNAKINVKIVSLIFFILTFNIINNYKSYNCK
(restricted) Ga0233439_102499962	3300024261	Seawater	NPGNGFVLVITVVVVEILTTDGINLSAKSANEAGTVFEFDLIEKLNVISNATNIILTFFILTLYIVNNYKS
Ga0228623_10333022	3300024267	Seawater	EVVVTVCVVEILTTDGINLSARSAKDAGTDCEFDXIEKPKVNTNTENISFNLFILFFNIINNYKSYYCKY
Ga0233451_102022831	3300024301	Salt Marsh	ELLLVTTVVDVEIFTTEGINFSARSANDAGTGLEFDCNEKLREKIIVKKINFNFFILTFNKINYHKTYNCKNKST
Ga0233451_103946251	3300024301	Salt Marsh	TVVEVEIFTTDGINLSARSAKDAGTGLEFDCKEKLKEKIIVKNINFIFFMLTFNKINNYKTNYCKDKSTRS
(restricted) Ga0233449_12180252	3300024302	Seawater	EILTTDGINLSARSAKDAGTVFELDXIEKLRVKINVKIISLIFFILTFNIINNYKS
(restricted) Ga0233445_11182641	3300024339	Seawater	GRGLVFVTTVXVVEIFTTDGINLSARSANDAGTELEFEMVCKLKVKNNANNINLIFFILTFNIINNYKSYNCKN
Ga0209992_102986052	3300024344	Deep Subsurface	TVXVVEIFTTDGINLSARSAKDAGTDFEFENVEKLKVKNTAKSKNFILFILTFNIINNYKSYYCKY
Ga0209715_10478433	3300025699	Pelagic Marine	DGINLSARSANDAGTELEFEMVCKLKVKNNANNINLIFFILTFNIINNYKSYNCKN
Ga0209667_11540352	3300025707	Marine	LTTDGINLSARSAKDAGTVFELDXIEKLRVKINVKIISLIFFILTFNIINNYKS
Ga0208543_10270803	3300025810	Aqueous	PGGNVNGRGLVFVTTVXVVEIFTTDGINLSARSANDAGTELELEMVCKLKVKNNANNINLIFFILTFNIINNYKSYNCKN
Ga0209832_10549891	3300025830	Pelagic Marine	XNGKGFEVVVTVCVVEILTTDGINLSARSAKDAGTDCEFDNVEKLNVKMNAKNKNLIFFMLTFNIINNNKSYNCKY
Ga0209223_104561521	3300025876	Pelagic Marine	EVVVTVCVVEILTTDGINLSARSAKDAGTDCEFDNVEKLNVKMNAKNKNLIFFMLTFNIINNNKSYNCKY
Ga0209632_100615604	3300025886	Pelagic Marine	GGNXNGNGFEVVVTVCVVEILTTDGINLSARSAKDAGTDCEFDNVEKLNVKMNAKNKNLIFFMLTFNIINNNKSYNCKY
Ga0209632_104291862	3300025886	Pelagic Marine	NVNGRGLVFVTTVXVVEIFTTDGINLSARSANDAGTELEFEMVCKLKVKNNANNINLIFFILTFNIINNYKSYNCKN
Ga0209335_103250332	3300025894	Pelagic Marine	TTDGINLSAKSAKDSGTDCELDSVEKKNVKNTVKIVNLIFFILVFNIINNYKSNCCKGKP
Ga0208880_10211501	3300026085	Marine	TTEGINFSARSANDAGTGLEFDCNEKLRENIIVKIINFNFFILTFNKINNHKTYNCKNKS
Ga0208127_11518861	3300026201	Marine	GLLLVTTVVDVEIFTTEGINFSARSANDAGTGLEFECNEKLREKIIVKTINFNFFILTFNKINYHKT
Ga0247598_10455523	3300026466	Seawater	GNGLVFVTTVCVVEILTTDGINLSARSANDAGTELEFDIVWKLKTKNNAKNINLIFFILTFYIINNYKSYNCKN
Ga0228622_10949192	3300026479	Seawater	VVTVCVVEILTTDGINLSARSANDAGTELEFDIVWKLKVKNNAKNINLIFFILTFYIINNYKSYNCKK
Ga0247605_11084561	3300026503	Seawater	SSNGEPGGNXNGNGLVFVTTVXVVEIFTTDGISFSARSAKDAGTDFEFDNVDKLKVKNIAKNTNLIFFILTFNIINNYKTYYCKY
Ga0233395_10505782	3300026511	Seawater	PGGNVNGNGFEVVVTVCVVEMLTTDGISFSARSANDAGTVFEFDXIEKLKAKINVKTTSLIFFILTFNIINNYKSYNCKN
Ga0208946_10435133	3300027207	Marine	SNGEPGGKVNGNGFELVTTVCVVEILTTDGINLSARSAKDAGTVFELDXIEKLRVKINVKIISLIFFILTFNIINNYKS
Ga0208971_11284573	3300027582	Marine	NISSNGEPGGNWNGKGFVVVVTVXVVEILTTDGINLSARSAKDAGTVFELDXIEKLRVKINVKIISLIFFILTFNIINNYKS
Ga0209404_112816271	3300027906	Marine	PGNGLLLVTTVCVVDIFTTEGINFSARSAKDTGIEFEFDWIEKPKVKIIAKNINLIFFILTFNIINNYKSYNCKN
Ga0233401_10692831	3300028127	Seawater	KGNGLVFVTTVCVVEILTTDGINLSARSANDAGTELEFDIVWKLKVKNNAKNINLIFFILTFYIINNYKSYNCKN
Ga0257121_11821461	3300028198	Marine	TTEGINLSAKSAKDSGTDCEFDXTDKPKLMTNVKIINLIFFILILNIINNYKTQNCKN
Ga0228614_10693832	3300028416	Seawater	GNXNGNGFVVVVTVCVVEILTTDGINLSAKSAKDAGTVFEFELIEKLKTKTNVKTTNLNFFILTFNIINYYKTYYCKN
Ga0308004_101344102	3300031630	Marine	GGNXKGNGLELVTTVXVVEIFTTDGINLSARSAKDSGTDVEFDIVELLNVNNNIKNIALIFFILTFNVIDNYKS
Ga0315328_104206873	3300031757	Seawater	SVCVVDIFTTEGINLSARSAKDTGIELEFDWIEKPKVKIIAKNINLIFFILTFNIINNYKSYNCKN
Ga0315322_105732301	3300031766	Seawater	XNGKGLVVVVTVXVVEIFTTDGINLSARSANDAGTVFELDXIEKPKVKTKVINIILILLILTLYIINNYKP
Ga0315322_109399663	3300031766	Seawater	NGDPGGKVNGKGLVLVTTVCVVEMLTTDGINLSAKSAKDAGTVFEFDXIEKLKVKKSVKNINLIFSILTLNIINNYKSYNCKK
Ga0315332_101525653	3300031773	Seawater	VEIFTTDGINLSAKSAKDAGTVFEFELIEKLKTKINVKTINLNFFILTFNIINYYKPYNCKN
Ga0315315_108657101	3300032073	Seawater	VEIFTTDGINLSARSANEAGTDFEFDXIEKLNAKMNVKITSLNFFILTFYKINNYKSYSCKN
Ga0315339_11788671	3300032134	Seawater	VEILTTDGINLSARSAKDAGTVLELDXIEKLRVKINVKIISLIFFILTFNIINNYKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters