Sample 3300026402

Basic Information
IMG/M Taxon OID	3300026402 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133460 \| Gp0293497 \| Ga0255304
Sample Name	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepA_8d (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepA_8d (Metagenome Metatranscriptome)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	79639270
Sequencing Scaffolds	36
Novel Protein Genes	42
Associated Families	34

Dataset Contents

Total Genome Size

79639270

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	20
All Organisms → Viruses → Predicted Viral	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → Acidovorax temperans	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Fragilariopsis → Fragilariopsis cylindrus → Fragilariopsis cylindrus CCMP1102	1
All Organisms → cellular organisms → Eukaryota → Cryptophyceae	3
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → cellular organisms → Eukaryota → Sar	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → Viruses → Predicted Viral

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → Acidovorax temperans

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila

All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Fragilariopsis → Fragilariopsis cylindrus → Fragilariopsis cylindrus CCMP1102

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia

All Organisms → cellular organisms → Eukaryota → Sar

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater → Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Ecosystem Assignment (GOLD)

Name

Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Type

Environmental

Taxonomy

Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater → Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river → river water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

freshwater river biome → river → river water

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: Louisiana
Coordinates	Lat. (^o)	29.8571	Long. (^o)	-89.9778	Alt. (m)	N/A	Depth (m)	5
Location on Map

Zoom:	Powered by OpenStreetMap^©

Location Information

Location

USA: Louisiana

Coordinates

Lat. (^o)

29.8571

Long. (^o)

-89.9778

Alt. (m)

N/A

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000344	Metagenome / Metatranscriptome	1257	Y
F004323	Metagenome / Metatranscriptome	443	Y
F016245	Metagenome / Metatranscriptome	248	N
F020340	Metagenome / Metatranscriptome	224	Y
F023494	Metagenome / Metatranscriptome	210	Y
F025755	Metagenome / Metatranscriptome	200	Y
F029333	Metagenome / Metatranscriptome	188	Y
F032540	Metagenome / Metatranscriptome	179	N
F041009	Metagenome / Metatranscriptome	160	Y
F042297	Metagenome / Metatranscriptome	158	Y
F042748	Metagenome / Metatranscriptome	157	Y
F044442	Metagenome / Metatranscriptome	154	Y
F047008	Metagenome / Metatranscriptome	150	N
F049019	Metagenome / Metatranscriptome	147	N
F054052	Metagenome / Metatranscriptome	140	N
F058592	Metagenome / Metatranscriptome	134	Y
F058729	Metagenome / Metatranscriptome	134	N
F061852	Metagenome / Metatranscriptome	131	Y
F063389	Metagenome / Metatranscriptome	129	N
F065781	Metagenome / Metatranscriptome	127	Y
F067528	Metagenome / Metatranscriptome	125	Y
F070907	Metagenome / Metatranscriptome	122	Y
F076149	Metagenome / Metatranscriptome	118	N
F078630	Metagenome / Metatranscriptome	116	N
F082153	Metagenome / Metatranscriptome	113	Y
F084131	Metagenome / Metatranscriptome	112	N
F089854	Metagenome / Metatranscriptome	108	N
F090468	Metagenome / Metatranscriptome	108	Y
F091401	Metagenome / Metatranscriptome	107	N
F092088	Metagenome / Metatranscriptome	107	N
F095362	Metagenome / Metatranscriptome	105	Y
F099393	Metagenome / Metatranscriptome	103	N
F100446	Metagenome / Metatranscriptome	102	N
F103362	Metagenome / Metatranscriptome	101	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0255304_1000322	Not Available	5511	Open in IMG/M
Ga0255304_1002292	Not Available	2412	Open in IMG/M
Ga0255304_1003875	All Organisms → Viruses → Predicted Viral	1881	Open in IMG/M
Ga0255304_1004911	Not Available	1690	Open in IMG/M
Ga0255304_1007384	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1394	Open in IMG/M
Ga0255304_1007937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1347	Open in IMG/M
Ga0255304_1011141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → Acidovorax temperans	1144	Open in IMG/M
Ga0255304_1014330	Not Available	1006	Open in IMG/M
Ga0255304_1021214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	815	Open in IMG/M
Ga0255304_1021417	Not Available	811	Open in IMG/M
Ga0255304_1023933	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Fragilariopsis → Fragilariopsis cylindrus → Fragilariopsis cylindrus CCMP1102	765	Open in IMG/M
Ga0255304_1023977	Not Available	764	Open in IMG/M
Ga0255304_1024302	Not Available	759	Open in IMG/M
Ga0255304_1027246	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	712	Open in IMG/M
Ga0255304_1027938	Not Available	702	Open in IMG/M
Ga0255304_1028289	Not Available	698	Open in IMG/M
Ga0255304_1029276	Not Available	684	Open in IMG/M
Ga0255304_1029875	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	676	Open in IMG/M
Ga0255304_1034243	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	628	Open in IMG/M
Ga0255304_1034740	Not Available	623	Open in IMG/M
Ga0255304_1034932	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	621	Open in IMG/M
Ga0255304_1035573	Not Available	615	Open in IMG/M
Ga0255304_1036433	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	608	Open in IMG/M
Ga0255304_1038116	Not Available	593	Open in IMG/M
Ga0255304_1040584	Not Available	573	Open in IMG/M
Ga0255304_1042721	Not Available	557	Open in IMG/M
Ga0255304_1042806	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	556	Open in IMG/M
Ga0255304_1046060	Not Available	535	Open in IMG/M
Ga0255304_1046289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
Ga0255304_1047096	Not Available	528	Open in IMG/M
Ga0255304_1047261	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	527	Open in IMG/M
Ga0255304_1047683	Not Available	525	Open in IMG/M
Ga0255304_1047764	Not Available	524	Open in IMG/M
Ga0255304_1049586	All Organisms → cellular organisms → Eukaryota → Sar	514	Open in IMG/M
Ga0255304_1051123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	506	Open in IMG/M
Ga0255304_1051422	Not Available	504	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0255304_1000322	Ga0255304_10003226	F063389	MQIGWLQIIVIGVVVLLLFGKLPDIIQDLKSAYLEVSKKKEEKEK
Ga0255304_1002292	Ga0255304_10022921	F084131	QAAQPAPAQPLPSNVPLAQIEDFQSLQTLRDQAKEAKRFAQEQLDRDDFEPVRVGDTVLGRPELKAILRNAEKTLDDDIPARAQFLTQKQEAQKLAHQMFPYLKNKETPEYVLAQQALSQMPWMRNLPNADWIIGVQIEGLKALEAKQKAKPESKPKPAMSSKPPASQSVVSSAGGDVRAPSATKAANQIEALRMQLSKKGGVTANEAAAFLLAREKAKLNR
Ga0255304_1003875	Ga0255304_10038757	F042297	MSFETVVLNKVAKIVKCDNAAEFFCGTLSVICDKADAMKILRELNKDYKNKVQMSPDGSYGYLFDFVA
Ga0255304_1004911	Ga0255304_10049112	F063389	MQIGWLQIVVIGLVVLLLFGKLPNIIQDLKSAYLEISKKNEEKGK
Ga0255304_1007384	Ga0255304_10073843	F095362	VNIPVQAKFIEWFYNKSFPSYDSKRNRSGFLGEMLDLNKIDHDTIQYWVQEAFHQGAKAQRELDSEK
Ga0255304_1007937	Ga0255304_10079371	F049019	MRTSRKLTHVLFAVFTLAIMSMAALAADPGTSLPASSQASDQKQGSLLIYSHYGSVTSNVSANDTRINITNTHVTSSVVVHFFFVSQACNVADFKTELTQSQTYSFLVSDFDPDTVGYIMAVAEAEDGLPIAMNFLIGDLFVKSSTGPFSANLGAIAFAALWDGTNNGNNPNESGFWRIPGGDATTPSVNITFGSAGNYNALPRTLAVDNIPSFAGGDRALLILLTPVQSFVTGGGAVGTLFGLLFDDAEQSQSFQISGGSCQSTNIISDSYPRTAPRFTTVVPAGRTGWMKVYKTSDLGILGSVIVYNIGGRDVNFHGGHNLHHLTLSGTQTATLPVFPF
Ga0255304_1011141	Ga0255304_10111413	F067528	DFFELAQSGGSEQNSVLIALKPLYEGAFFKLWSGADREKVNQINSLSAAIERLKI
Ga0255304_1014330	Ga0255304_10143301	F042748	STEMRAVYGLVFSTLALAVVVCVSVNSLEYRPEVELFQQPADATMLKTEHFTPYNPLEDPELAPKYDVDTAKETKQSEDDFKAARGEIKKGMGIMKTVLAKLTKQDDARDKLMDEAITISDRIHSVRHLLINVKAEALGIQTKEDGNWIFTNPFGKGADPPDQDLAPFRGQITELTTKSEKISTDLKDLIKRCHSARNDALVLDSELYDEIHKAKVISADAVQGIHHHLDHVESFNHKDYDIVHRVDAKLNDKFHITRHRLNGMINLANAMSARQPNEVSEVTALATDLLIVNAETQERLGRMANLLDSIEFERGFRAKQ
Ga0255304_1015691	Ga0255304_10156911	F103362	SLIRDGLKFRDKPTTKSAGASVAALTSRRGSSTNNRSGDDNIEKLRAQAKAGDKKAADNLLVARLQSIRGNRGR
Ga0255304_1021214	Ga0255304_10212141	F000344	MRPKHPHAAESGVGKHTARESESAKACADGEERVANAHS
Ga0255304_1021381	Ga0255304_10213811	F100446	IIPGETITMDIQEPAKQCPDKAAIIAQNCKGVFGGALKDCGADICLGVTPAEAGSDAHKGQVTTKLIKLLPQTNAEQKGDTCMLLDQLKQVDKLPRTGGKSFSFSTFIKQEGERLQGTIARKGNEWALESNDDGDVIFTSNGVSCKAPKVIGRKYKNIVAVSSATEQKIKIVVDGKEACSVAGKLFTEPLDAPLNLGSISDHIQAKVAKPTYIASGVRSNEIGLFSKEKPECIGA
Ga0255304_1021417	Ga0255304_10214171	F000344	MRPRSALAALSGVGEHTARESESAQCCAAGKERVANAHPH
Ga0255304_1023933	Ga0255304_10239332	F054052	SAIYPDDHWSFSKKLTSSNIDDEIKSAVDGGKTMFVRLIASAG
Ga0255304_1023977	Ga0255304_10239771	F047008	MKMTKDQKTCRKLWLEHVRESGGIVHTRPPMGDENGFCLVAMPCAYNSRHAKFYDVSFAWCADNDVFDRKVGEFIALDRQMFGQTTKLPGYIIDNMLEMDLVD
Ga0255304_1024302	Ga0255304_10243021	F099393	MLVERGMPMRRFLPHGETQAPDSACGQVTGSGRWSGRVKKVVFFSVCLPALLIALGAGDSLNLAYGQSESNAAVPTAVRATESGLSDQNRPTRDRSEPTVTGAAMHVALFVPRN
Ga0255304_1027246	Ga0255304_10272461	F032540	MARGSVAVVPELGLATGADQVGGRSLRKRIVVAVVMLAFGCAAVALAAQSSSSDSKLRDTSVLKVGVNDRLDVWRQYQNDEDINPRKKKSPKADWEKQRSIPDFVDGIIGPSPTSMDEGGSKSRGSFNVKKITDKTDFYYLRISDRSGNNDRIRAELVGSDGYRLDWVGFGEIFTGPIHEGNLGETDYLRVEDLVTGEEQFFRFRF
Ga0255304_1027938	Ga0255304_10279381	F025755	GKLMKNKIAKTIGVLSVASLMSTSAFSQITISGYAEVGMLTGSNKGARAAASSKGLGSEFLVQVAGKGTLSNGWTFTGYQNFDTDEVGNGVDSANSNPMTTRALEISPSKDFKLFYTYDGVYGGEIARTAIPVVTERPVDLTGLSGLAEFIDVTSGGHAVGLEALNLGPAGRFSVAYNPNIYATQSQSSDRVYSATNYVASGENKASGYSFGYSVAPGPIKIAAGYTKLDAKQA
Ga0255304_1028289	Ga0255304_10282891	F089854	QSLLGITRLIVVGIPGITEMSIDNPRTDPATGKLSEGTGFIRWNKWGALRVEDVEVKDGKLELKVVGMLPTRNFIQRKGSADAIEVRFIMSIGSGGVEQSGFNVTVPEAQVPGGAISVKDIFVTYNPPEIAMGALFQIGDGRGIGASFALSDGNLNGLSLRGSDLNWRLGASGSRIDKLDVGFGNIQNPPWYIDGGFTVIVGETRVAGRWPLEVEARGRFYSDYRVDIRGSA
Ga0255304_1029276	Ga0255304_10292761	F058729	AFVFAAGTVNAQVNGPITGKTQVVQANANLQAEILVTIPSPGADGGAVRFGTVPRNSAINMDPRAVASTNLGFSSAPAMVSITSQPDEPLRIEYPSAVLLSNNTSGTLNYITYRPQISAINDHVALTATNREASKYLGTTNPGRDQVTADGGTGEGSTASSAVNGYVVMSPFTGTPAGKVTLFVGGKLYDGGTPNTPVMNISANIPNTKQVGFYDGEFTLNILYLN
Ga0255304_1029875	Ga0255304_10298751	F070907	LRKMNYGSVERVSPLVRESRKPRIVALAGAAVLLGLIALGALIAQSSQPSELLGEMLARGENARNKGVPPTVFAPPPEPADWDGAKAIIGKMPPTGVAPSALQEAGFETRGSITVRRDLAAENMYFRIYGRINHHLKCTLRQYRRMSMEYQGEVIYTGFKRVYTGQSEIQTGHLPRTHDTEFDVLTVRDLDTGEVQYFRVH
Ga0255304_1034243	Ga0255304_10342431	F058592	MVLLQVPSARTKYVVVEAGATVTVLPVPTDVPPQLPLYHFQLAPIPRLPPLTLNVVFLPKQIVVVPLIEVAGTEVSRTSNE
Ga0255304_1034243	Ga0255304_10342432	F058592	VVVAGATVTLLPVPTAVPPQLPLYHFQLAPVPRLPPLTLNVVFLPRQIVVVPLIDVAGTEVS
Ga0255304_1034740	Ga0255304_10347402	F091401	AFVLIALLTAGLLFVAHTLYFFDGFRNKILFFIGITALRTILIIALLVVVVAETIAFLAFLGISDKIAKDSPNCLSGPCQKFADTVTTQLGLSDLLVSGGNVAVSLQQVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0255304_1034932	Ga0255304_10349322	F092088	MSLTDAELRKLLRRPGCENTHNLGVQMRRTFNRFFNQYKSLVEPNYPEMKFSREDLLWGFNTLVACGWGSGNDGTGDKMMVPFSELPVHRRESAQKATNRGFISAAKEYQAGEELTFDYGLLNDAVLAFYGIPTPDCRGLRR
Ga0255304_1035573	Ga0255304_10355731	F041009	AGRSRIPEFYETGIYHQPTFDMAFDFYKPRLAQFQQISSFEFQCQRGKSTAKDFWMPWFQFSFTNGEKYLQGQMSTDRLAVKKRLMLSAEEYMIRIDLSSHKDKGYAITGIKTNVKYYPFKCGQSTIALDVPPGGKHLIIGLAGNLQTSADSTYFINIQALHLKLNEFIGDPTEAQLNP
Ga0255304_1036433	Ga0255304_10364332	F078630	FNQPLLFIDSVQNAKRQFVEKYVRHPDMKADMIIYIDAQSKFLHSAVEATSNIISTCGREILHTKVEKLLNPFSIDWFKAGWDAWSAQSRAEQKA
Ga0255304_1038116	Ga0255304_10381161	F076149	MNKLLLTTLGMVAAVSAAYAQGTFNANNNFTPAGASAKAFVLGLDGNPLAKANGRVEILSGGTSLSPNGSAGVALTLDGLFFINGLVAPGAGLGGTANLVVRAWDVTTGATYADATSRGSVNVVISSLGGGTTPPATFGNNSDFKGLKLEGG
Ga0255304_1040584	Ga0255304_10405841	F020340	LLSEGSRTFADLGLQGDAGTHFRLRFSYNSLTVESNEFNVKPNHMHVSVHPSDGQYSAGASKADIGAGITVQARDGGNNVLTGADNTNAGSDTVVVTVLEASGSVLDANLLGSKGLFLSSGARTFADLGLQGDAGTHFRLRFTYNSLSVESNEFNVRPNHMHVSVHPSDGQYGSGASKADIGSGITVQARD
Ga0255304_1042721	Ga0255304_10427213	F065781	MTEGERAGWLAVVYLLMVGVAAYFTIFMVIFSFVKQYLGD
Ga0255304_1042806	Ga0255304_10428062	F044442	IESNPQYKKDPQITLKECAAIYYTLRDQRTGVKNEKIGYPNWLFNKNKVERGVYQLPVPTAQELSDYQKELDAKVNPVGKAKAKVAKLAQAKTVKVKTPKKTAVVAEKADKMEASRLQRIVDESIAMDDDVEDFNQILKENGIEI
Ga0255304_1046060	Ga0255304_10460601	F016245	QTNNIHAVTTTSAGVVIGGSVTGILPAIVGGLGTLRVDLSNTVRQGTGIRVTVSFTPVDAVPGDGRLVVTLVGAGFACTAGTAVTFVSPAGGSGTVSISAGLVLTLQLSGGTFSAGSAVEFWFGGVTNPTSTQPQTNNIHAVTTTSAGVVIGGSVTGILPAIVGGLGTLRVDLSNTV
Ga0255304_1046289	Ga0255304_10462892	F023494	MKGNAALNCVFLSFPQLNRLVTTTNFIDKKSHLREQILISQFKPNQLSKVNTKELG
Ga0255304_1047096	Ga0255304_10470962	F082153	VTPVELPAVAAPMVSPLTVTVTALLAATLPPSIEMMIWVLLGVPALPAGGPLPLTCTPGVPVLEKNPEGYVSVMLLPLPSAPPALVVNENVAAAPDFPATRSEGA
Ga0255304_1047261	Ga0255304_10472611	F090468	MKLLEFTYTKQAGDVSKRAVIELVTPTTFVEGWDVTSLDNNEFAKFAQSMGELRRRQHEETMQLLQEFDLKHNYRRFKPEGMSDVQVEYV
Ga0255304_1047683	Ga0255304_10476831	F016245	AGQAVQFVFGGVTNPNSNQSHISNIHAATLNAPGNIVGASVTGYLPAIVNGLGALVVGLSNTVRQGTGIVMTVSFTPVDAVPNDGRFVLTLVGAGFACSASTTVTFVSPADGSGYVSISAGLVLTLQLSGGTFSAGQAVQFVFGGVTNPNSNQSHISNIHAATLNAPGNIVGAS
Ga0255304_1047764	Ga0255304_10477641	F061852	KTGEKPVKKDVTADAIGAILRLSENDIESLTKANKSALKAIFDALANSKPL
Ga0255304_1047764	Ga0255304_10477642	F047008	MEKMTKNQKIIRKDLLAYVLESGGIVHTRPPQGDENGFALVAVPCVHNAKDAKFYDVAFAWCADNDQFDRKVGEFIAVNRYMNGETTKLPGYIIDNMLEMDLV
Ga0255304_1048073	Ga0255304_10480731	F029333	MTSRVLVGVAAVPETPLPLICTPGDPLLAKNPDGYVSVIVLPAASAPPAVVVNENVAAAPLLPATRSDNDI
Ga0255304_1049586	Ga0255304_10495862	F054052	KVLLLAALLGVASAIYPDDHWNFSKKLTSSNIDEEIKSAVDGGKTMFVRLIASAG
Ga0255304_1051123	Ga0255304_10511231	F004323	MPRVGLRRLEGVAEPASANHSPVTRDYPSRALSDVFQAAALR
Ga0255304_1051422	Ga0255304_10514221	F058592	RKYVVVAAGETVTLLPVPTDVPPQLPLYHLQLAPAPRLPPVVLSVVLWPLHIVVVPLIEVAGTDVS
Ga0255304_1051422	Ga0255304_10514222	F058592	MVLLHVPSALRKYVVVEAGATVTLLPVPADVPPQLPLYHLQLAPAPKLPPLTLNVVFLPRQIVVLPVIEVAGTEVS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026402: Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepA_8d (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences