Sample 3300026347

Overview

Basic Information
IMG/M Taxon OID	3300026347 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133548 \| Gp0296342 \| Ga0256809
Sample Name	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PU4
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	85039952
Sequencing Scaffolds	29
Novel Protein Genes	30
Associated Families	28

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria	7
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	2
All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
Not Available	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Sediment Microbial Communities From Tidal Freshwater Marsh On Altamaha River, Georgia, United States
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment → Sediment Microbial Communities From Tidal Freshwater Marsh On Altamaha River, Georgia, United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → freshwater marsh → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Sediment (non-saline)

Location Information
Location	USA: Georgia
Coordinates	Lat. (^o)	31.3377	Long. (^o)	-81.4644	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000982	Metagenome / Metatranscriptome	814	Y
F001196	Metagenome / Metatranscriptome	749	Y
F002568	Metagenome / Metatranscriptome	547	Y
F007558	Metagenome / Metatranscriptome	349	Y
F007982	Metagenome / Metatranscriptome	341	Y
F008086	Metagenome / Metatranscriptome	339	Y
F016989	Metagenome	243	Y
F018837	Metagenome / Metatranscriptome	233	Y
F021565	Metagenome / Metatranscriptome	218	Y
F022216	Metagenome / Metatranscriptome	215	Y
F031953	Metagenome / Metatranscriptome	181	Y
F033098	Metagenome / Metatranscriptome	178	Y
F034003	Metagenome	176	Y
F036766	Metagenome / Metatranscriptome	169	Y
F045836	Metagenome / Metatranscriptome	152	Y
F048395	Metagenome	148	Y
F049078	Metagenome / Metatranscriptome	147	Y
F050471	Metagenome / Metatranscriptome	145	Y
F053087	Metagenome	141	Y
F056714	Metagenome	137	Y
F057161	Metagenome	136	Y
F058543	Metagenome	135	N
F066900	Metagenome	126	Y
F076227	Metagenome	118	Y
F090575	Metagenome	108	Y
F092937	Metagenome / Metatranscriptome	107	N
F097083	Metagenome / Metatranscriptome	104	Y
F105454	Metagenome	100	N

Family

Category

Number of Sequences

3D Structure?

F000982

Metagenome / Metatranscriptome

814

F001196

Metagenome / Metatranscriptome

749

F002568

Metagenome / Metatranscriptome

547

F007558

Metagenome / Metatranscriptome

349

F007982

Metagenome / Metatranscriptome

341

F008086

Metagenome / Metatranscriptome

339

F016989

Metagenome

243

F018837

Metagenome / Metatranscriptome

233

F021565

Metagenome / Metatranscriptome

218

F022216

Metagenome / Metatranscriptome

215

F031953

Metagenome / Metatranscriptome

181

F033098

Metagenome / Metatranscriptome

178

F034003

Metagenome

176

F036766

Metagenome / Metatranscriptome

169

F045836

Metagenome / Metatranscriptome

152

F048395

Metagenome

148

F049078

Metagenome / Metatranscriptome

147

F050471

Metagenome / Metatranscriptome

145

F053087

Metagenome

141

F056714

Metagenome

137

F057161

Metagenome

136

F058543

Metagenome

135

F066900

Metagenome

126

F076227

Metagenome

118

F090575

Metagenome

108

F092937

Metagenome / Metatranscriptome

107

F097083

Metagenome / Metatranscriptome

104

F105454

Metagenome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0256809_1000008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	6930	Open in IMG/M
Ga0256809_1000542	All Organisms → cellular organisms → Bacteria → Proteobacteria	1918	Open in IMG/M
Ga0256809_1000628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1817	Open in IMG/M
Ga0256809_1000945	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
Ga0256809_1001491	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
Ga0256809_1001612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1303	Open in IMG/M
Ga0256809_1002256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1161	Open in IMG/M
Ga0256809_1002366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	1142	Open in IMG/M
Ga0256809_1002534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	1113	Open in IMG/M
Ga0256809_1004001	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
Ga0256809_1005235	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	861	Open in IMG/M
Ga0256809_1006451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	799	Open in IMG/M
Ga0256809_1007764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	751	Open in IMG/M
Ga0256809_1008283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	735	Open in IMG/M
Ga0256809_1008705	Not Available	723	Open in IMG/M
Ga0256809_1009133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	710	Open in IMG/M
Ga0256809_1009630	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
Ga0256809_1010623	Not Available	675	Open in IMG/M
Ga0256809_1011004	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	667	Open in IMG/M
Ga0256809_1015551	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
Ga0256809_1016438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	584	Open in IMG/M
Ga0256809_1016664	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
Ga0256809_1017166	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
Ga0256809_1017427	Not Available	573	Open in IMG/M
Ga0256809_1017643	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	572	Open in IMG/M
Ga0256809_1021005	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	540	Open in IMG/M
Ga0256809_1021516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
Ga0256809_1024198	Not Available	516	Open in IMG/M
Ga0256809_1025408	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	507	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0256809_1000008

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans

6930

Open in IMG/M

Ga0256809_1000542

All Organisms → cellular organisms → Bacteria → Proteobacteria

1918

Open in IMG/M

Ga0256809_1000628

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans

1817

Open in IMG/M

Ga0256809_1000945

All Organisms → cellular organisms → Bacteria

1578

Open in IMG/M

Ga0256809_1001491

All Organisms → cellular organisms → Bacteria

1343

Open in IMG/M

Ga0256809_1001612

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans

1303

Open in IMG/M

Ga0256809_1002256

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

1161

Open in IMG/M

Ga0256809_1002366

All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium

1142

Open in IMG/M

Ga0256809_1002534

All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium

1113

Open in IMG/M

Ga0256809_1004001

All Organisms → cellular organisms → Bacteria

946

Open in IMG/M

Ga0256809_1005235

All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis

861

Open in IMG/M

Ga0256809_1006451

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia

799

Open in IMG/M

Ga0256809_1007764

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria

751

Open in IMG/M

Ga0256809_1008283

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium

735

Open in IMG/M

Ga0256809_1008705

Not Available

723

Open in IMG/M

Ga0256809_1009133

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi

710

Open in IMG/M

Ga0256809_1009630

All Organisms → cellular organisms → Bacteria

698

Open in IMG/M

Ga0256809_1010623

Not Available

675

Open in IMG/M

Ga0256809_1011004

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

667

Open in IMG/M

Ga0256809_1015551

All Organisms → cellular organisms → Bacteria

595

Open in IMG/M

Ga0256809_1016438

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium

584

Open in IMG/M

Ga0256809_1016664

All Organisms → cellular organisms → Bacteria

582

Open in IMG/M

Ga0256809_1017166

All Organisms → cellular organisms → Bacteria

576

Open in IMG/M

Ga0256809_1017427

Not Available

573

Open in IMG/M

Ga0256809_1017643

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

572

Open in IMG/M

Ga0256809_1021005

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

540

Open in IMG/M

Ga0256809_1021516

All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium

536

Open in IMG/M

Ga0256809_1024198

Not Available

516

Open in IMG/M

Ga0256809_1025408

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium

507

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0256809_1000008	Ga0256809_10000087	F022216	VNRDVSGRHATTGPTDEQRRRIRRSAMLLAAVALAIYVTFIASGMLGWRG
Ga0256809_1000542	Ga0256809_10005422	F021565	VSIKYYAHFLVDEPDPRGLQEYRGVVELDGQPRRGGRELREAAHIIARNLGRQMREVKVLQWARLH
Ga0256809_1000628	Ga0256809_10006282	F000982	MTSWKPSGRARQLLEHHRLRGRSYPTPVYWDRLYQMLVEEAERRGKTPPPPPLTYALDHVPTEADRIECLHEQVAWADRNNLLHRIQMFFDAMPPSAWNRLT
Ga0256809_1000683	Ga0256809_10006832	F105454	VTNMSDTKDPAEPRGTPRKDDGQREPEPRRSRFGMASEGWEAYSTWLDRVRQQPGPVSRQAVIAKSLYSISSYKNWAGKARGAFDKPK
Ga0256809_1000945	Ga0256809_10009453	F090575	SWTRRVLGASIAAPDGRGPIPDNRAVPEIVQGIERLFGAGSAAALIVQAVLLHQSLNVVPEWPNPASLTEEEVPHCIRPELLPLLEAVMLVDSDAWQLFDPPSKEKFRQCTLAVFADVRRRVAG
Ga0256809_1001491	Ga0256809_10014913	F007982	MRPAARLTLSCLVLSLLAACGAPSPPQDEAEAREKGRDTDKTVFDDMIQTEDRARAVEGVVLGHKADLDATIEQQSEGATPPDEP
Ga0256809_1001612	Ga0256809_10016123	F036766	MSNRSFASWIVDRPGPAVLVTGLLGLLPLLGLGFAFFLPGAVPALIVLMRGPRAGTLVAAGAVMLLALAVWFVGRPLPVGLIYAAWVLGPPLALAVLFQRTGSLSMSLQVAVLAGVVLLLLLHVTLGDPEQFWAPRVRDLATEMQRRG
Ga0256809_1002256	Ga0256809_10022562	F058543	MEIVTISAKIYEKKKAEFFQTMESLTGLVEKQCHGLDIRVKDDHSLIIKITFDGKDQMEKNFYTGEFNILKGTVKSLCEDVRIKINDTAVNNN
Ga0256809_1002366	Ga0256809_10023661	F050471	SPPSGSHYGYMAGNGGSSGPAATAARPDRLASAGERVMNGFHVHAIGWVLVANAYILTPAEARELTDLWTDLVRRRAADLRQAPLLLHLLFPRSLPLAPATRAALAKLVAHMVSQHPERFGDAALRQRRNHWAGQAMLGCLLSGLTALLLPIHWTWAAPVTPTFLLMGFGCLLPTVMLWRAAAAVHACNTGRFATHLVERLLHRFQVR
Ga0256809_1002534	Ga0256809_10025342	F048395	MSIGELLVRQSDLRLHYLRRPPQAPGRLLKHVLHWGAWLNYLLSVVVLTAGITAGWRFAEIGFDLMMNNVSGQEVQQQIIKKIPAWILVYKGVKRW
Ga0256809_1004001	Ga0256809_10040012	F016989	VSATGGSPFDEMLERSAGLQGIVDAMHSTHPLVREIADSTQIMQAQDEIREWYYTLPDAQRIPSTLQQKALDSMRDAVGAVRAHGTDEDVLQYAEFVLSTAHRVATAAREGDLFGVGGQLVSVGEQEFITKLKQLSQPQQR
Ga0256809_1005235	Ga0256809_10052351	F092937	YRVAVTVEPMVRNCTCIGYLSEISDMGAPQINPKFTYDAQERVLRKADMMNATHLVWMGDYPFAAAAMIYRCGD
Ga0256809_1006451	Ga0256809_10064511	F053087	MGLSTSVGMLKIKIWYGLDPGTGRWGCPMRQRWGLGPHQEMSPALEDKLAFTVTATGSYEEAATLAQKWNCPVDDSTLHALTRRLGRRAERQTQVRLESGVGELTPQRAASELAVFMLDGYLVRYRGPGWGKRRTQKKRVEWHEIKTGVFYLQEQAAQTEGGRGMLSEKVVVCWQG
Ga0256809_1007764	Ga0256809_10077641	F001196	LSAIASGTLATLLASTAMAGPVGDQYRGGAFGLPWNASKSAIEGKYPGGKWQKDDKGRDRYCANSRQTLLKLPAQHQTRELCFMIGSDGTLASITARMDASLPSLLAVVNRSRTVFGDFDAVRRDESAIQSRSTAMLWTRDKPFVVQVSSTNDADGSPQEVLFTVADEAALYAEGTAQVSNKPPK
Ga0256809_1008283	Ga0256809_10082831	F066900	MTQYQTLTEMLDHRSRGSLAIGYLEGENAEKSLPLSQLRRRALGILHHLQRLGAQPGDLLILHVAGNEPFLDA
Ga0256809_1008705	Ga0256809_10087051	F097083	ATVRGTITYQAPPTPASMLYFISSEHWYVQEAPSGSPAATFELQVAPGTYQVVAFPVGSENLTNRPAAAYSTGTGLGALTVTAGQVLEGVHVQNINSDRCVTYAFPASPDGRFAPMEENCSKLTPETTPATVRGTITYQAPPTPTSMLYFISVEHWYSVEVPGGSSSSTFEIQVAPGTYQVVAFPVGSQNLTNRPAAAYTAGSGIDTLTVTAGQVVEGIHVQNINSDRCVNFAFPASPDG
Ga0256809_1009133	Ga0256809_10091332	F018837	MPTIFDELRRNYGTASAEQKLHILRRELLRPIVTVDSSAQLLQNASDSICECLGEDVSADEFRNTVKWLTEAARDLHQILDALTENVSQVPDKHGVD
Ga0256809_1009630	Ga0256809_10096302	F034003	MKKRRRRNHSLKKTNQLSFDFSTNDPIEIHTPKSDISELRKELAWEHRPIIEIVKS
Ga0256809_1010623	Ga0256809_10106231	F001196	MSKFPLSALSAGVLATLMAGLATAGPVGDQFRGGAFGLPWNASKSAIEAKYPGGTWASDDKGRAQYCSASRQTLLKLPAPHQTKELCFVIGSDGTLASVTARMDASLPSLLAVVNRSRTIFGDFDAVQRDENAIQSRSTAMLWTREKPYVVQVSSTNDADGSPTAVNFTVADEASMYAEGAAKVSNKPVP
Ga0256809_1011004	Ga0256809_10110041	F007558	MQAIADLKALALKMLEGAFQSGDVHATQQMGVSMTNAVKREGVVIIQNQNVEVFARIIPSMVKMLKLCDAIESNWRRQAAIELEPQQDQLPPPAGGEDTDPIEACCLWLYENHINWQDMQDLMKARYLDHVIGHFRKKSEAAKWL
Ga0256809_1015551	Ga0256809_10155512	F076227	MLQELAARTGATFWAIASMIFFVGAWLAVAVWVWRTRPEQLEARARLALEGDEDWHDVLSDTQTER
Ga0256809_1016438	Ga0256809_10164382	F049078	MKIHVKHSLKTDVASALKLCTELGNQEAIYARLGGTDVEIKREGRSPKVRLRISRKEAVNPPAAIRRLVPSTNHVSHTEAWSADGEGYCAD
Ga0256809_1016664	Ga0256809_10166641	F008086	EAGGGDSVLIVADDPIALAQTARHLVDDVYQAPGRPLLRVALHSGAVRTRPQASGPAHQIVGGDAVLCAARVEPVVAPGEIWATEEFRQQLLERPSLWRTVALAPPEGGERFNVAKAGGAEGELWVRLYRLEM
Ga0256809_1017166	Ga0256809_10171661	F031953	EDPLKQFRFTGWRATTRLEAQVAVPSVGFSWRSDPLNTSSASFGIIGEEVNGRYFTM
Ga0256809_1017427	Ga0256809_10174271	F045836	FTALGYYIVSSFLDPVQWLICGICGWKMDRIDQAMIAGAAMVGLLFIILVFLYPEVKLFSFPSPHVGISILGRAIGAALMTALIFWLKQRQMNRKKSS
Ga0256809_1017643	Ga0256809_10176431	F007558	TQQMGVNMSNAVKREGVVIIQNQNVEVLARIMPSMVKTLKLCDAMESSWRSQVEVTVAPQHPQLPPPGDEGDTDPIEACCTWLYENHTKWQDMQDLMKARYLDYVIGRFKTKTGAARWLGVGSTYLCKLSKTATHAARRN
Ga0256809_1021005	Ga0256809_10210051	F056714	TDPLSVFAATLQNTDSQAYELQIRQSGATDSSRYRIVENAQVEICFYGCEMTLLSTGQTVQVSPRDTVVIDSGVMNVTSGD
Ga0256809_1021516	Ga0256809_10215161	F033098	AIREQIVKRGRYVASNLAFNAKYGVLTEDKPLLTQFLEGAVAPGGQGERSDVVGAMIRDAKGAVLAQTGKALRALPDAPAAELEEREALTTDGEPVLLFRAPVTTATGGDEAAAGAVRTEAVKGGVEVAISQGALRDVQLRRVFEALMLAAVVILVGFAIGWVVIGRWLKPLQSMALA
Ga0256809_1024198	Ga0256809_10241982	F002568	MKNPPILISVIGFFAALAGFAWIFVGLRMLGFDWFGALGDLPAFEHVGLWGWLAIITGIVWLMAAFGLWSLQPWARIFAMIIAGFALFEAVLAFFQFPGTGIGFGMAI
Ga0256809_1025408	Ga0256809_10254081	F057161	GAGAGSTVIVLDWVIVLLQASVNVQDSVTIPPQGPGSVPNVEVTDPLIRQAPLALLV

Scaffold ID

Protein ID

Family

Sequence

Ga0256809_1000008

Ga0256809_10000087

F022216

VNRDVSGRHATTGPTDEQRRRIRRSAMLLAAVALAIYVTFIASGMLGWRG

Ga0256809_1000542

Ga0256809_10005422

F021565

VSIKYYAHFLVDEPDPRGLQEYRGVVELDGQPRRGGRELREAAHIIARNLGRQMREVKVLQWARLH

Ga0256809_1000628

Ga0256809_10006282

F000982

MTSWKPSGRARQLLEHHRLRGRSYPTPVYWDRLYQMLVEEAERRGKTPPPPPLTYALDHVPTEADRIECLHEQVAWADRNNLLHRIQMFFDAMPPSAWNRLT

Ga0256809_1000683

Ga0256809_10006832

F105454

VTNMSDTKDPAEPRGTPRKDDGQREPEPRRSRFGMASEGWEAYSTWLDRVRQQPGPVSRQAVIAKSLYSISSYKNWAGKARGAFDKPK

Ga0256809_1000945

Ga0256809_10009453

F090575

SWTRRVLGASIAAPDGRGPIPDNRAVPEIVQGIERLFGAGSAAALIVQAVLLHQSLNVVPEWPNPASLTEEEVPHCIRPELLPLLEAVMLVDSDAWQLFDPPSKEKFRQCTLAVFADVRRRVAG

Ga0256809_1001491

Ga0256809_10014913

F007982

MRPAARLTLSCLVLSLLAACGAPSPPQDEAEAREKGRDTDKTVFDDMIQTEDRARAVEGVVLGHKADLDATIEQQSEGATPPDEP

Ga0256809_1001612

Ga0256809_10016123

F036766

MSNRSFASWIVDRPGPAVLVTGLLGLLPLLGLGFAFFLPGAVPALIVLMRGPRAGTLVAAGAVMLLALAVWFVGRPLPVGLIYAAWVLGPPLALAVLFQRTGSLSMSLQVAVLAGVVLLLLLHVTLGDPEQFWAPRVRDLATEMQRRG

Ga0256809_1002256

Ga0256809_10022562

F058543

MEIVTISAKIYEKKKAEFFQTMESLTGLVEKQCHGLDIRVKDDHSLIIKITFDGKDQMEKNFYTGEFNILKGTVKSLCEDVRIKINDTAVNNN

Ga0256809_1002366

Ga0256809_10023661

F050471

SPPSGSHYGYMAGNGGSSGPAATAARPDRLASAGERVMNGFHVHAIGWVLVANAYILTPAEARELTDLWTDLVRRRAADLRQAPLLLHLLFPRSLPLAPATRAALAKLVAHMVSQHPERFGDAALRQRRNHWAGQAMLGCLLSGLTALLLPIHWTWAAPVTPTFLLMGFGCLLPTVMLWRAAAAVHACNTGRFATHLVERLLHRFQVR

Ga0256809_1002534

Ga0256809_10025342

F048395

MSIGELLVRQSDLRLHYLRRPPQAPGRLLKHVLHWGAWLNYLLSVVVLTAGITAGWRFAEIGFDLMMNNVSGQEVQQQIIKKIPAWILVYKGVKRW

Ga0256809_1004001

Ga0256809_10040012

F016989

VSATGGSPFDEMLERSAGLQGIVDAMHSTHPLVREIADSTQIMQAQDEIREWYYTLPDAQRIPSTLQQKALDSMRDAVGAVRAHGTDEDVLQYAEFVLSTAHRVATAAREGDLFGVGGQLVSVGEQEFITKLKQLSQPQQR

Ga0256809_1005235

Ga0256809_10052351

F092937

YRVAVTVEPMVRNCTCIGYLSEISDMGAPQINPKFTYDAQERVLRKADMMNATHLVWMGDYPFAAAAMIYRCGD

Ga0256809_1006451

Ga0256809_10064511

F053087

MGLSTSVGMLKIKIWYGLDPGTGRWGCPMRQRWGLGPHQEMSPALEDKLAFTVTATGSYEEAATLAQKWNCPVDDSTLHALTRRLGRRAERQTQVRLESGVGELTPQRAASELAVFMLDGYLVRYRGPGWGKRRTQKKRVEWHEIKTGVFYLQEQAAQTEGGRGMLSEKVVVCWQG

Ga0256809_1007764

Ga0256809_10077641

F001196

LSAIASGTLATLLASTAMAGPVGDQYRGGAFGLPWNASKSAIEGKYPGGKWQKDDKGRDRYCANSRQTLLKLPAQHQTRELCFMIGSDGTLASITARMDASLPSLLAVVNRSRTVFGDFDAVRRDESAIQSRSTAMLWTRDKPFVVQVSSTNDADGSPQEVLFTVADEAALYAEGTAQVSNKPPK

Ga0256809_1008283

Ga0256809_10082831

F066900

MTQYQTLTEMLDHRSRGSLAIGYLEGENAEKSLPLSQLRRRALGILHHLQRLGAQPGDLLILHVAGNEPFLDA

Ga0256809_1008705

Ga0256809_10087051

F097083

ATVRGTITYQAPPTPASMLYFISSEHWYVQEAPSGSPAATFELQVAPGTYQVVAFPVGSENLTNRPAAAYSTGTGLGALTVTAGQVLEGVHVQNINSDRCVTYAFPASPDGRFAPMEENCSKLTPETTPATVRGTITYQAPPTPTSMLYFISVEHWYSVEVPGGSSSSTFEIQVAPGTYQVVAFPVGSQNLTNRPAAAYTAGSGIDTLTVTAGQVVEGIHVQNINSDRCVNFAFPASPDG

Ga0256809_1009133

Ga0256809_10091332

F018837

MPTIFDELRRNYGTASAEQKLHILRRELLRPIVTVDSSAQLLQNASDSICECLGEDVSADEFRNTVKWLTEAARDLHQILDALTENVSQVPDKHGVD

Ga0256809_1009630

Ga0256809_10096302

F034003

MKKRRRRNHSLKKTNQLSFDFSTNDPIEIHTPKSDISELRKELAWEHRPIIEIVKS

Ga0256809_1010623

Ga0256809_10106231

F001196

MSKFPLSALSAGVLATLMAGLATAGPVGDQFRGGAFGLPWNASKSAIEAKYPGGTWASDDKGRAQYCSASRQTLLKLPAPHQTKELCFVIGSDGTLASVTARMDASLPSLLAVVNRSRTIFGDFDAVQRDENAIQSRSTAMLWTREKPYVVQVSSTNDADGSPTAVNFTVADEASMYAEGAAKVSNKPVP

Ga0256809_1011004

Ga0256809_10110041

F007558

MQAIADLKALALKMLEGAFQSGDVHATQQMGVSMTNAVKREGVVIIQNQNVEVFARIIPSMVKMLKLCDAIESNWRRQAAIELEPQQDQLPPPAGGEDTDPIEACCLWLYENHINWQDMQDLMKARYLDHVIGHFRKKSEAAKWL

Ga0256809_1015551

Ga0256809_10155512

F076227

MLQELAARTGATFWAIASMIFFVGAWLAVAVWVWRTRPEQLEARARLALEGDEDWHDVLSDTQTER

Ga0256809_1016438

Ga0256809_10164382

F049078

MKIHVKHSLKTDVASALKLCTELGNQEAIYARLGGTDVEIKREGRSPKVRLRISRKEAVNPPAAIRRLVPSTNHVSHTEAWSADGEGYCAD

Ga0256809_1016664

Ga0256809_10166641

F008086

EAGGGDSVLIVADDPIALAQTARHLVDDVYQAPGRPLLRVALHSGAVRTRPQASGPAHQIVGGDAVLCAARVEPVVAPGEIWATEEFRQQLLERPSLWRTVALAPPEGGERFNVAKAGGAEGELWVRLYRLEM

Ga0256809_1017166

Ga0256809_10171661

F031953

EDPLKQFRFTGWRATTRLEAQVAVPSVGFSWRSDPLNTSSASFGIIGEEVNGRYFTM

Ga0256809_1017427

Ga0256809_10174271

F045836

FTALGYYIVSSFLDPVQWLICGICGWKMDRIDQAMIAGAAMVGLLFIILVFLYPEVKLFSFPSPHVGISILGRAIGAALMTALIFWLKQRQMNRKKSS

Ga0256809_1017643

Ga0256809_10176431

F007558

TQQMGVNMSNAVKREGVVIIQNQNVEVLARIMPSMVKTLKLCDAMESSWRSQVEVTVAPQHPQLPPPGDEGDTDPIEACCTWLYENHTKWQDMQDLMKARYLDYVIGRFKTKTGAARWLGVGSTYLCKLSKTATHAARRN

Ga0256809_1021005

Ga0256809_10210051

F056714

TDPLSVFAATLQNTDSQAYELQIRQSGATDSSRYRIVENAQVEICFYGCEMTLLSTGQTVQVSPRDTVVIDSGVMNVTSGD

Ga0256809_1021516

Ga0256809_10215161

F033098

AIREQIVKRGRYVASNLAFNAKYGVLTEDKPLLTQFLEGAVAPGGQGERSDVVGAMIRDAKGAVLAQTGKALRALPDAPAAELEEREALTTDGEPVLLFRAPVTTATGGDEAAAGAVRTEAVKGGVEVAISQGALRDVQLRRVFEALMLAAVVILVGFAIGWVVIGRWLKPLQSMALA

Ga0256809_1024198

Ga0256809_10241982

F002568

MKNPPILISVIGFFAALAGFAWIFVGLRMLGFDWFGALGDLPAFEHVGLWGWLAIITGIVWLMAAFGLWSLQPWARIFAMIIAGFALFEAVLAFFQFPGTGIGFGMAI

Ga0256809_1025408

Ga0256809_10254081

F057161

GAGAGSTVIVLDWVIVLLQASVNVQDSVTIPPQGPGSVPNVEVTDPLIRQAPLALLV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026347: Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PU4

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences