Metagenome Family F076227

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076227
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	68 residues
Representative Sequence	MLQELAAQTGASGWVIGSMIFFVAAWAVIAWRVYRARPEDLDARARLALEGDADDRQGGPPATRTDR
Number of Associated Samples	68
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.34 %
% of genes near scaffold ends (potentially truncated)	15.25 %
% of genes from short scaffolds (< 2000 bps)	82.20 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.661 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (28.814 % of family members)
Environment Ontology (ENVO)	Unclassified (28.814 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (44.068 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.84% β-sheet: 0.00% Coil/Unstructured: 43.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF14715	FixP_N	53.39
PF02433	FixO	37.29
PF13746	Fer4_18	2.54
PF05751	FixH	1.69
PF12801	Fer4_5	1.69
PF00596	Aldolase_II	0.85
PF07364	DUF1485	0.85
PF02082	Rrf2	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG2993	Cbb3-type cytochrome oxidase, cytochrome c subunit FixO	Energy production and conversion [C]	37.29
COG5456	Nitrogen fixation protein FixH	Inorganic ion transport and metabolism [P]	1.69
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.85
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.85
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.85
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.85
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.85
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.85
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.85
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.85
COG5476	Microcystin degradation protein MlrC, contains DUF1485 domain	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.66 %
Unclassified	root	N/A	20.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.66 %
Unclassified	root	N/A	20.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.66 %
Unclassified	root	N/A	20.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.34 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	16.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.34 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	16.10 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	6.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.34 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	16.10 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.34 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	6.78 %
Bacteroidetes Order II. Incertae sedis	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis	5.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.08 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.34 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.78 %
Rhodothermaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	5.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.08 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.34 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.08 %
unclassified Rhodothermaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → unclassified Rhodothermaceae	1.69 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.34 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.08 %
Rhodothermaceae bacterium RA	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → unclassified Rhodothermaceae → Rhodothermaceae bacterium RA	1.69 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_103206518	Not Available	537	Open in IMG/M
3300003471\|FeGluNO3_10174975	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300004241\|Ga0066604_10129596	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1002	Open in IMG/M
3300004282\|Ga0066599_100224347	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300004282\|Ga0066599_101197256	Not Available	567	Open in IMG/M
3300004782\|Ga0062382_10635856	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300006224\|Ga0079037_100326238	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300006224\|Ga0079037_100684669	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300006224\|Ga0079037_100789996	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300006224\|Ga0079037_101116102	Not Available	783	Open in IMG/M
3300006224\|Ga0079037_101402096	Not Available	696	Open in IMG/M
3300006224\|Ga0079037_101643485	Not Available	642	Open in IMG/M
3300006930\|Ga0079303_10148456	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300009009\|Ga0105105_10065835	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1675	Open in IMG/M
3300009037\|Ga0105093_10009702	All Organisms → cellular organisms → Bacteria	3872	Open in IMG/M
3300009075\|Ga0105090_10007367	All Organisms → cellular organisms → Bacteria	6457	Open in IMG/M
3300009075\|Ga0105090_10210844	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300009082\|Ga0105099_10789816	All Organisms → cellular organisms → Bacteria → FCB group	594	Open in IMG/M
3300009091\|Ga0102851_10455243	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300009091\|Ga0102851_10809003	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1003	Open in IMG/M
3300009091\|Ga0102851_12139381	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300009111\|Ga0115026_10046642	All Organisms → cellular organisms → Bacteria	2364	Open in IMG/M
3300009111\|Ga0115026_10348851	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300009131\|Ga0115027_10650114	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300009131\|Ga0115027_11198530	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300009146\|Ga0105091_10578088	Not Available	578	Open in IMG/M
3300009167\|Ga0113563_10537623	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1282	Open in IMG/M
3300009167\|Ga0113563_11326167	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300009167\|Ga0113563_11985580	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300009167\|Ga0113563_13487884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300009179\|Ga0115028_10877360	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300009179\|Ga0115028_11882946	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300009430\|Ga0114938_1116530	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	969	Open in IMG/M
3300009870\|Ga0131092_10335323	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1448	Open in IMG/M
3300012931\|Ga0153915_12158001	Not Available	652	Open in IMG/M
(restricted) 3300013138\|Ga0172371_10833520	Not Available	605	Open in IMG/M
3300013232\|Ga0170573_10004821	Not Available	694	Open in IMG/M
3300013315\|Ga0173609_10929542	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300021602\|Ga0194060_10000522	All Organisms → cellular organisms → Bacteria	27914	Open in IMG/M
(restricted) 3300024300\|Ga0233420_10346530	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300025130\|Ga0209594_1062055	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	1179	Open in IMG/M
3300026347\|Ga0256809_1015551	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300027683\|Ga0209392_1012484	All Organisms → cellular organisms → Bacteria	2617	Open in IMG/M
3300027715\|Ga0208665_10014823	All Organisms → cellular organisms → Bacteria → Acidobacteria	1984	Open in IMG/M
3300027762\|Ga0209288_10027854	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	1644	Open in IMG/M
3300027778\|Ga0209464_10398461	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300027792\|Ga0209287_10055689	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	1452	Open in IMG/M
3300027796\|Ga0209373_10312112	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300027840\|Ga0209683_10525411	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300027841\|Ga0209262_10020453	All Organisms → cellular organisms → Bacteria → Acidobacteria	2803	Open in IMG/M
3300027841\|Ga0209262_10434447	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300027871\|Ga0209397_10054384	Not Available	1509	Open in IMG/M
3300027871\|Ga0209397_10483457	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300027877\|Ga0209293_10042068	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300027877\|Ga0209293_10318892	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300027885\|Ga0209450_10052737	All Organisms → cellular organisms → Bacteria → Acidobacteria	2522	Open in IMG/M
3300027885\|Ga0209450_10099154	All Organisms → cellular organisms → Bacteria → Acidobacteria	1928	Open in IMG/M
3300027885\|Ga0209450_10147647	All Organisms → cellular organisms → Bacteria → Acidobacteria	1620	Open in IMG/M
3300027885\|Ga0209450_10268353	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300027887\|Ga0208980_10010760	All Organisms → cellular organisms → Bacteria	5353	Open in IMG/M
3300027890\|Ga0209496_10098362	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	1247	Open in IMG/M
3300027897\|Ga0209254_10016769	All Organisms → cellular organisms → Bacteria	6707	Open in IMG/M
3300027899\|Ga0209668_10261393	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1100	Open in IMG/M
3300027899\|Ga0209668_10561444	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300027900\|Ga0209253_10021657	All Organisms → cellular organisms → Bacteria	5421	Open in IMG/M
3300028176\|Ga0268284_1134539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300031577\|Ga0316602_10057828	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300031834\|Ga0315290_10014304	All Organisms → cellular organisms → Bacteria	6033	Open in IMG/M
3300031834\|Ga0315290_10214503	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300031997\|Ga0315278_10201199	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	2050	Open in IMG/M
3300032018\|Ga0315272_10265345	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300032164\|Ga0315283_10517772	Not Available	1295	Open in IMG/M
3300032164\|Ga0315283_11446505	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300032256\|Ga0315271_10032607	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → unclassified Rhodothermaceae → Rhodothermaceae bacterium RA	3660	Open in IMG/M
3300032256\|Ga0315271_10076506	All Organisms → cellular organisms → Bacteria	2489	Open in IMG/M
3300032256\|Ga0315271_10735959	Not Available	848	Open in IMG/M
3300032397\|Ga0315287_10531192	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300032397\|Ga0315287_11858691	Not Available	668	Open in IMG/M
3300033233\|Ga0334722_10000222	All Organisms → cellular organisms → Bacteria	86822	Open in IMG/M
3300033233\|Ga0334722_10003711	All Organisms → cellular organisms → Bacteria	16285	Open in IMG/M
3300033408\|Ga0316605_10008242	All Organisms → cellular organisms → Bacteria	6087	Open in IMG/M
3300033408\|Ga0316605_10060235	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	2740	Open in IMG/M
3300033408\|Ga0316605_10277678	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1457	Open in IMG/M
3300033408\|Ga0316605_10448056	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1177	Open in IMG/M
3300033408\|Ga0316605_10507752	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300033408\|Ga0316605_10627663	Not Available	1006	Open in IMG/M
3300033408\|Ga0316605_11569002	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300033408\|Ga0316605_12340858	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300033413\|Ga0316603_10754867	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300033413\|Ga0316603_10944818	Not Available	813	Open in IMG/M
3300033414\|Ga0316619_10300504	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300033416\|Ga0316622_100007712	All Organisms → cellular organisms → Bacteria	8295	Open in IMG/M
3300033416\|Ga0316622_100598697	Not Available	1267	Open in IMG/M
3300033416\|Ga0316622_101316972	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300033416\|Ga0316622_101488770	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300033419\|Ga0316601_100787913	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300033419\|Ga0316601_100926878	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300033419\|Ga0316601_101220916	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300033433\|Ga0326726_10691071	Not Available	984	Open in IMG/M
3300033433\|Ga0326726_12135104	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300033434\|Ga0316613_10232010	Not Available	1201	Open in IMG/M
3300033482\|Ga0316627_100358078	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300033482\|Ga0316627_103022466	Not Available	501	Open in IMG/M
3300033483\|Ga0316629_11458587	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300033483\|Ga0316629_11515840	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300033488\|Ga0316621_10535994	Not Available	824	Open in IMG/M
3300033513\|Ga0316628_101010731	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300033521\|Ga0316616_100049350	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → unclassified Rhodothermaceae → Rhodothermaceae bacterium RA	3267	Open in IMG/M
3300033521\|Ga0316616_100582560	Not Available	1308	Open in IMG/M
3300033521\|Ga0316616_100613283	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1281	Open in IMG/M
3300033521\|Ga0316616_101213002	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	960	Open in IMG/M
3300033521\|Ga0316616_101920880	Not Available	782	Open in IMG/M
3300033557\|Ga0316617_100292296	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300033557\|Ga0316617_101934655	Not Available	604	Open in IMG/M
3300034052\|Ga0373889_012164	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300034076\|Ga0373898_045268	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300034080\|Ga0373897_083467	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.92%
Engineered	Engineered	5.08%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	61.86%
Terrestrial	Environmental → Terrestrial	33.05%
Wastewater	Engineered → Wastewater	2.54%
Bioremediation	Engineered → Bioremediation	2.54%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	59.32%
Soil	Environmental → Terrestrial → Soil	29.66%
Metal	Engineered → Bioremediation → Metal	2.54%
Marine	Environmental → Aquatic → Marine	1.69%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.69%
Peat	Environmental → Terrestrial → Peat	1.69%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	1.69%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.85%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.85%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	28.81%
Sediment	Environmental → Aquatic → Freshwater → Sediment	16.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.25%
Lake	Environmental → Aquatic → Freshwater → Lake	13.56%
Lentic	Environmental → Aquatic → Freshwater → Lentic	6.78%
Pond	Environmental → Aquatic → Freshwater → Pond	5.08%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	2.54%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.69%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.69%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	1.69%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.85%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	28.81%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	16.95%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	14.41%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	11.02%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	6.78%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	5.08%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.54%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.69%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.69%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.69%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	1.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.85%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.85%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	28.81%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	11.02%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	11.02%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	9.32%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.63%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	6.78%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	5.08%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.54%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	2.54%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.69%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.69%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.69%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.69%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.85%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.85%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.85%
Wetland Sediment	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Wetland Sediment	0.85%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.85%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.85%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003471	Fe-reducing enrichment culture from wetland. Sample 5 with periodic nitrate additions.	Environmental	Open in IMG/M
3300004241	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009430	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013138 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_12m	Environmental	Open in IMG/M
3300013232	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA ? S1	Engineered	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300024300 (restricted)	Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_102_MG	Environmental	Open in IMG/M
3300025130	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring (SPAdes)	Environmental	Open in IMG/M
3300026347	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PU4	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027762	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027796	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300028176	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_40m	Environmental	Open in IMG/M
3300031577	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034052	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.2	Engineered	Open in IMG/M
3300034076	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.2	Engineered	Open in IMG/M
3300034080	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.1	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1032065181	3300001213	Wetland	MLQELATRTGAVGWTIASMLFFVVAWLVIAVWVFRTRPAELDARARLALEGDAEIRQGVPSGARTER*
FeGluNO3_101749754	3300003471	Wetland Sediment	MNMLQELAAQTGAGGWAIASMVFFAVVWLVIAGRVIRARPDDMEARARLALEGESEGEDEALTRGNHG*
Ga0066604_101295962	3300004241	Freshwater	MLQELAAQTGASALAMASMIFFMVAWVAIAVWVWRARPEDLEARARLALEGDAENSQGVPPGTRTER*
Ga0066599_1002243471	3300004282	Freshwater	MLQELAAQTGAGVWAIASMIFFVVAWLGIAVWVFRTRPEDLEARARLALEGDAEDWQGSPSGAQTKR*
Ga0066599_1011972561	3300004282	Freshwater	VLQELAAQTGAAGWAIASMLFFAVVWLVIAWRVVRARPDEMEARARLALEGEAEDRD
Ga0062382_106358562	3300004782	Wetland Sediment	MLQELAAQTGASGWVIASMLFFVVAWAAIAWRVCRARPDDMEARARLALEGDGEAGHTDPSGTQTTR*
Ga0079037_1003262382	3300006224	Freshwater Wetlands	MLQELAAQTGASGWVIGSMIFFVAAWAAIAWRVFRARPEDLEARARLALEGEAESRQGASPRTRTGR*
Ga0079037_1006846692	3300006224	Freshwater Wetlands	MLQELAAHTGASGWVIGSMVFFVAAWAAIAWRVFRTRPEEFEARARLALEGEAEEGRRVPPATRTER*
Ga0079037_1007899962	3300006224	Freshwater Wetlands	MLQELAAETGASGWAIGSMIFFVAAWAAIAWRVYRARPEDLDARARLALEGEADDRQGGPPATRTDR*
Ga0079037_1011161022	3300006224	Freshwater Wetlands	MLQELAAQTGASAWAIASMIFFVVAWVAIAARVVRSRPEDLEARAHLALEGDADDRLGVPPATRTDR*
Ga0079037_1014020962	3300006224	Freshwater Wetlands	MLQELAAQTGASGWVIGSLLFFVAAWAVIAWRVYRARPEDLAARARLALEGDADDRQGSPPATRTDR*
Ga0079037_1016434852	3300006224	Freshwater Wetlands	MLQELAAETGASGWVIGSLIFFVAAWGAIAWRVCRARPEDLNARARLALEGDAEDWQE
Ga0079303_101484562	3300006930	Deep Subsurface	VLQELAAQTGASGWTIGAMIFFVAVWAVIAWRVYRARPEDLDARARLALEGDADDRQGGPPATRTDR*
Ga0105105_100658353	3300009009	Freshwater Sediment	MLQELAAQTGAAGWAIASMLFFAVVWLVIVWRVVRARPDEMEARARLALEGEAEDRDEAVTRGHHG*
Ga0105093_100097022	3300009037	Freshwater Sediment	VLQELAAQTGAAGWAIASMLFFAVVWLVIVWRVVRARPDEMEARARLALEGEAEDRDEAVTRGHHG*
Ga0105090_100073672	3300009075	Freshwater Sediment	MLRELAAQTGAGGWAIASMLFFAVVWLVIAWRVVRARPDEMEARARLALEGEAEDRDEAQTRGHHG*
Ga0105090_102108443	3300009075	Freshwater Sediment	MLRELAAQTGAGGWAIASMIFFAVVWLVIAWRVFRARPDEMEARARLALEGEAEDGDEARTRGHHG*
Ga0105099_107898162	3300009082	Freshwater Sediment	MLQELAAETGAAGWAIASMLFFLVVWLAIAARVFRTRPEELEALARLALEGEGEDWQGDSTAARTDR*
Ga0102851_104552432	3300009091	Freshwater Wetlands	MLQELAAQTGASGWVIGSMIFFVAAWAVIAWRVYRARPEDLDARARLALEGDADDRQGGPPATRTDR*
Ga0102851_108090032	3300009091	Freshwater Wetlands	MLQELAAHTGASGWVIGSMVFFVAAWAAIAWRVFRTRPEEFDARARLALEGEAEEGRRVPPATRTER*
Ga0102851_121393812	3300009091	Freshwater Wetlands	MLQELAAETGASGWAIGSMIFFVAAWVVIAWRVFRARPEDLDARARLALEGEADDRQGGPPATRTDR*
Ga0115026_100466422	3300009111	Wetland	VLQELAAQTGASGWVIGSLLFFVAAWAAIAWRVYRARPEDLAARARLALEGDADDRQGSPPATRTDR*
Ga0115026_103488511	3300009111	Wetland	MLQELAARTGASAWVIGSMLLFLGVWLVIAVRVLVARSDDMDARARLALEGDGDRGIGAPAPHGRRIE*
Ga0115027_106501141	3300009131	Wetland	MLQELAAQTGGSGWVIGSMIFFVAAWAAIAWRVFRARPEDLEARARLALEGEAESRQGASPRTRTGR*
Ga0115027_111985302	3300009131	Wetland	MLQELAAQTGAGGWAIASMLFFSVVWLVIAGRVLRARPEDMDARARLALEGDGENGDGALTRGNHG*
Ga0105091_105780882	3300009146	Freshwater Sediment	MLQELAAQTGAAGWAIASMLFFAVVWLIIVWRVVRARPDEMEARARLALEGEAEERDEALTRGHHG*
Ga0113563_105376232	3300009167	Freshwater Wetlands	VLQELAAQTGASGWVIGSMIFFVAAWAAIAWRVFRARPEDLEARARLALEGEAGDRQEASPERRTER*
Ga0113563_113261672	3300009167	Freshwater Wetlands	MNMLQELAAQTGASGWVIGSMMFFVVAWAAIAWRVCRARPDDMEARARLALEGDDDAGHTGPSGTQTTR*
Ga0113563_119855802	3300009167	Freshwater Wetlands	QELAARTGASGWVIGSMIFFVAAWVAIAAWAFRTRPEDLEARARLALEGEAEDWQGNPPATRTER*
Ga0113563_134878842	3300009167	Freshwater Wetlands	MLQELAAQSGASGWVIASMIFFVVVWAAIAWRVFRTRPEEFEARARLALEGDAEDGHRDASETRTER*
Ga0115028_108773602	3300009179	Wetland	SDRWGGEVNVLQELAERTGASGWVIGSMIFFVVAWAAIAWRVFRARPGDMEARARLALEGDAEDGRTDPSGTQTKR*
Ga0115028_118829462	3300009179	Wetland	VLQELAAQTGASGWVIGSLLFFVAAWAVIAWRVYRARPEDLAARARLALEGDADDRQGSPPATRTDR*
Ga0114938_11165302	3300009430	Groundwater	MLQELAAHTGASGWAIASMIFFAAAWAVIAWRVCRARPEDLDARARLALEGDADHRQEGPPATRTDR*
Ga0131092_103353232	3300009870	Activated Sludge	MLQELAAETGASVWALVSMAFFFLAWLGIAVWVFRTRPEAFEARARLALEGDATEWHGVPSDPQTDR*
Ga0153915_121580011	3300012931	Freshwater Wetlands	MLQELAAQTGAAGLAIASMLFFLVVWLAIAWRVFRARPADMEARARLALEGEAEDQQGVSSGARTEALTRGNHG*
(restricted) Ga0172371_108335202	3300013138	Freshwater	VEAGAVAVLQDLAAQTGAGVWVIASMIFFVVAWLGIAVWVVRTRPEVLEARARLALEGEAEDGQGVPPGTRAEG*
Ga0170573_100048212	3300013232	Sediment	MLQELAAQTGAGVWVIASMIFFVVAWIGIAVWVVRIRPEVLDARARLALEGENEDGQGVPSSTRADR*
Ga0173609_109295422	3300013315	Sediment	MLQELAAQTGAGVWVIASMIFFVVAWLGIAVWVVRTRPEVLDARARLALEGENEDGQGVPSSTRADR*
Ga0194060_1000052217	3300021602	Anoxic Zone Freshwater	MLQELAAETGASVWAIGSMMFFLLAWLGIAAWVYRTRPDEFDARARLPLEGDTEEWQKVPSATPTGR
(restricted) Ga0233420_103465302	3300024300	Freshwater	MLQELAAETAATGWAIASMVFFGAIWLGIAVWVFRTSPEQFESRARLALEGDAEDRQNAPPVTQAER
Ga0209594_10620552	3300025130	Groundwater	MLQELAAHTGASGWAIASMIFFAAAWAVIAWRVCRARPEDLDARARLALEGDADHRQEGPPATRTDR
Ga0256809_10155512	3300026347	Sediment	MLQELAARTGATFWAIASMIFFVGAWLAVAVWVWRTRPEQLEARARLALEGDEDWHDVLSDTQTER
Ga0209392_10124842	3300027683	Freshwater Sediment	MLRELAAQTGAGGWAIASMLFFAVVWLVIAWRVVRARPDEMEARARLALEGEAEDRDEAQTRGHHG
Ga0208665_100148233	3300027715	Deep Subsurface	VLQELAAQTGASGWTIGAMIFFVAVWAVIAWRVYRARPEDLDARARLALEGEADDRQGGPPATRTDR
Ga0209288_100278541	3300027762	Freshwater Sediment	RRGEVTVLQELAAQTGAAGWAIASMLFFAVVWLVIVWRVVRARPDEMEARARLALEGEAEDRDEAVTRGHHG
Ga0209464_103984611	3300027778	Wetland Sediment	ASAWAIASMIFFVIVWVAIAVWVVRIRPEDLDARARLALEGDADDGQGITPGTRTAR
Ga0209287_100556891	3300027792	Freshwater Sediment	MLQELAAQTGAAGWAIASMLFFAVVWLVIVWRVVRARPDEMEARARLALEGEAEDRDEAVTRGHHG
Ga0209373_103121121	3300027796	Freshwater	MLQELAAQTGASAWGIASMIFFMVAWVAIAVWVWRARPEDLEARARLALEGDAENSQGVPPGTRTER
Ga0209683_105254112	3300027840	Wetland Sediment	MLQELAAQTGASGWVIASMLFFVVAWAAIAWRVCRARPDDMEARARLALEGDGEAGHTDPSGTQTTR
Ga0209262_100204531	3300027841	Freshwater	MLQELAAQTGASALAMASMIFFMVAWVAIAVWVWRARPEDLEARARLALEGDAENSQGVPPGTRTER
Ga0209262_104344472	3300027841	Freshwater	MLQELAAQTGAAGWAIASMLFFVVVWLVIAWRVVRARPDEMKARARLALEGEAEDRDEARTRGHHG
Ga0209397_100543842	3300027871	Wetland	MLQELAAQTGASGWVIGSMIFFVAAWAVIAWRVYRARPEDLDARARLALEGDADDRQGGPPATRTDR
Ga0209397_104834572	3300027871	Wetland	MLQELAAQTGAGGWAIASMLFFAVVSVVIERRVWRTRPEELEARARLALEGDGENGDGALTRGNHG
Ga0209293_100420682	3300027877	Wetland	VLQELAAQTGASGWVIGSLLFFVAAWAAIAWRVYRARPEDLAARARLALEGDADDRQGSPPATRTDR
Ga0209293_103188922	3300027877	Wetland	MLQELAARTGASAWVIGSMLLFLGVWLVIAVRVLVARSDDMDARARLALEGDGDRGIGAPAPHGRRIE
Ga0209450_100527371	3300027885	Freshwater Lake Sediment	MLQELAAETGASAWAIGSMIFFVAAWAAIAWRVYRARPEDLDARARLALEGEADDRQGGPPAARTDR
Ga0209450_100991543	3300027885	Freshwater Lake Sediment	VLQELAAETGASGWVIGSMLFFVAAWAVIAWRVYRARPEDLDARARLALEGEAEDSDEALTRGHHG
Ga0209450_101476473	3300027885	Freshwater Lake Sediment	MLQELAAQTGASALAIASMIFFMVAWVAIAVWVLRTRPEDMESRARLALEGEAEDSQGVPPGTRTER
Ga0209450_102683532	3300027885	Freshwater Lake Sediment	VLQELAAQTGAVGWAVASMLLFLVVWLAIAWRVFRTRREDLEARARLALEGEAEDRQRVSSSARIEALTRGNHG
Ga0208980_100107605	3300027887	Wetland	MNMLQELAARTGASGWVIGSMVFFVVAWAAIAWRVIRARPEDLEARARLALEGDAGDWQRDSSGTRTER
Ga0209496_100983622	3300027890	Wetland	MNMLQELAAQTGASGWVIGSMMFFVVAWAAIAWRVCRARPDDMEARARLALEGDAEDGRTDPSGTQTKR
Ga0209254_100167692	3300027897	Freshwater Lake Sediment	MLQELAAQTGAAGWAIASMLFFAVVWLVIAWRVVRARPDEMEARARLALEGEAEDRDKALTRGHHG
Ga0209668_102613932	3300027899	Freshwater Lake Sediment	MLQELAAQTGASALAVASMIFFMVAWVAIAVWVLRTRPEDLEARARLALEGDAENSQGVPPGTRTER
Ga0209668_105614442	3300027899	Freshwater Lake Sediment	MLQELAAQTGAGVWAIASMIFFVVAWLGIAVWVLRIRPEDLEARARLALEGDDEDWQGVRSGTRAEALTRGNHGRVR
Ga0209253_100216575	3300027900	Freshwater Lake Sediment	MNMFQELAAQTGASALAIASMIFFMVAWVAIAVWVLRTRPEDLEARARLALEGDAENSQGVPPGTRTER
Ga0268284_11345392	3300028176	Saline Water	MLQELAAQTSATGWVIASMLLFAVAWLAIAVWVVRIRPDQLEARARLALEGDGEDGKDATPGTPTER
Ga0316602_100578282	3300031577	Soil	MLQELAAQTGASGWVIGSLLFFVAAWAVIAWRVYRARPEDLAARARLALEGDADDRQGSPPATRTDR
Ga0315290_100143041	3300031834	Sediment	MLQELAAQTGAGVWAIASMIFFVVAWLGIAVWVFRTRPEDLEARARLALEGDAEDWQGTPSGARTER
Ga0315290_102145032	3300031834	Sediment	MLQELAAQTGASAWAIASMIFFMVAWVAIAVWVMRTRPEDLEARARLALEGEAEDGQVAPPGTRTER
Ga0315278_102011993	3300031997	Sediment	MLQERAAQTGASAWAIASMIFFMVAWVAIAVWVMRTRPEDLEARARLALEGEAEDGQVAPPGTRTER
Ga0315272_102653452	3300032018	Sediment	MLQELAAETGANIWAIASMIFFFVAWLGIAAWVYRTRPEEFDARARLPLEGDAEQWQGASSESPAER
Ga0315283_105177722	3300032164	Sediment	MLQELAAQTGASAWAIASMIFFIVAWVAIAVWVMRTRPEDLEARARLALEGEAEDSQGVPPGTRTER
Ga0315283_114465051	3300032164	Sediment	RRYGEASPCRGRGLGEIAMLQELAAQTGAGVWAIASMVFFVVAWLGIAVWVFRARPEDLEARARLALEGDGEDGQGVESGTQTDALTRGNHGRVR
Ga0315271_100326074	3300032256	Sediment	MLQELAAQTGAGVWAIASMIFFVVAWLGIAVWVFRTRPEELQARARLALEGDAEDWQGTPSGARTER
Ga0315271_100765063	3300032256	Sediment	MLQELVAQTGAGIWAIASMVFFVVAWLGIAVWVFRIRPEDLEARARLALEGDDHDWQGDGSGTRTEALTRGNHGRVR
Ga0315271_107359592	3300032256	Sediment	MLQELAAQTGAGVWAIASMIFFVVAWLGIAVWVFRTRPEDLEARARLALEGDGEDWRGGGSGTRTKR
Ga0315287_105311922	3300032397	Sediment	MLQELAAQTGAGVWAIASMVFFVVAWLGIAVWVFRARPEDLEARARLALEGDGEDGQGVEPGTQTDALTRGNHGRVR
Ga0315287_118586912	3300032397	Sediment	MLQELAAQTGASALAIASMIFFMVAWVAIAVWVLRTRPEDLEARARLALEGEAENSQGVPPGTRTER
Ga0334722_1000022246	3300033233	Sediment	MLQELASETGAGVWAIVSMFFFFVAWLGIAAWVYRTRPEEFEARARLPLEGDTGQWQGVPSETSTER
Ga0334722_1000371114	3300033233	Sediment	MLQELAAETSGNVWAIGSMAFFLLVWLGIAVWVYRTRPEEFDRRARLALEGDEDGQGASPERPAER
Ga0316605_100082424	3300033408	Soil	MLQELAAQTGAGGWAIASMLFFAVVWLVIAGRVLRARPDDMEARARLALEGEAEDRDEALTRGNHG
Ga0316605_100602353	3300033408	Soil	MLQELAAQTGAAGLAIASMLFFLVVWLAIAWRVFRARPADMEARARLALEGEAEDQQGVSSGARTEALTRGNHG
Ga0316605_102776782	3300033408	Soil	MLQELAAQTGASGWVIGSMIFFVAAWAAIAWRVFRARPEDLEARARLALEGEAESRQGASPRTRTGR
Ga0316605_104480562	3300033408	Soil	MLQELAARTGASAWVIASMICFVVAWAAIAWRVFRTRREEFDARARLALEGDAEAGHTDPSGTQTTR
Ga0316605_105077523	3300033408	Soil	MLQELAERTGASGWVIGSMIFFVVAWAAIAWRVFRARPGDMEARARLALEGEAEDGRTDPSGTQTKR
Ga0316605_106276632	3300033408	Soil	MLQELAERTGASGWVIGSMIFFAVAWAAIAWRVFRAHPGDMEARARLALEGDDEAGHRDPSGTQTTR
Ga0316605_115690022	3300033408	Soil	MLQELAAQTGAGGWAIASMLFFAVIWLVIAGRVLRARPEDMDARARLALEGDGENGDGALTRGNHG
Ga0316605_123408581	3300033408	Soil	DGLSPAPRHRHQVEATREMNMLQELAAQTGASGWVIGSMMFFVVAWAAIAWRVCRARPGDMEARARLALEGDDDAGHTGPSGTQTTR
Ga0316603_107548671	3300033413	Soil	LAAQTGASGWVIGSMIFFVAAWAVIAWRVYRARPEDLDARARLALEGDADDRQGGPPATRTDR
Ga0316603_109448182	3300033413	Soil	MNMLQELAAQTGASGWVIGSMMFFVVAWAAIAWRVCRARPGDMEARALLALEGDDDAGHTGPSGTQTTR
Ga0316619_103005043	3300033414	Soil	MLQELAAQTGASGWVIGSLLFFVAAWAAIAWRVYRARPEDLAARARLALEGDADDRQGSPPATRTDR
Ga0316622_1000077127	3300033416	Soil	MLQELAAETGASGWAIGSMVFFVAAWAAIAWRVCRARPEDLDARARLALEGEADDRQGGPPAARTDR
Ga0316622_1005986972	3300033416	Soil	MLQELAAQTGASGWVIGSLLFFVAAWAVIAWRVYRARPEDLAARARLALEGDADDRQGSPPA
Ga0316622_1013169721	3300033416	Soil	GRCGEAGRRGQVTVLQELAAQTGASGWVIGSLLFFVAAWTVIAWRVFRARPEDLDARARLALEGDADDRQGGPPATRTDR
Ga0316622_1014887702	3300033416	Soil	MLQELAAQTGASAWAIASMIFFVVAWVAIAARVVRSRPEDLEARAHLALEGDADDRLGVPPATRTDR
Ga0316601_1007879132	3300033419	Soil	MLQELAAQSGASGWVIASMIFFVVVWAAIAWRVFRTRPEEFEARARLALEGDAEDGHRDASETRTER
Ga0316601_1009268781	3300033419	Soil	GRSYGGASRPGEVDMLQELAAQTGASGWVIGSMIFFVAAWAAIAWRVFRARPEDLEARARLALEGEAESRQGASPRTRTGR
Ga0316601_1012209162	3300033419	Soil	MLQELAAQTGASGWVIGSMMFFVVAWAAIAWRVCRARPDDMEARARLALEGDADAGHADPSGTQTTR
Ga0326726_106910711	3300033433	Peat Soil	MLQELAAGSGAAVWAIASLIFFLVVWLVIAARVFRARPEDLDARARLALEGDAEDRLETPPASRTER
Ga0326726_121351042	3300033433	Peat Soil	LASQTGATGWAIASMLFFLVVWLAIAWRVLRTRPADMEARARLALEGDAEDQQEVSSGAQTEALTRGNHG
Ga0316613_102320101	3300033434	Soil	MLQDLAAQTGASGWVIGSMIFFVAAWAAIAWRVFRARPEDLEARARLALEGEAESRQGASPRTRTGR
Ga0316627_1003580783	3300033482	Soil	VLQELAAQTGASGWVIGSLLFFVAAWAVIAWRVYRARPEDLAARARLALEGDADDRQGSPPATRTDR
Ga0316627_1030224661	3300033482	Soil	MLQELAAQTGAGVWVIASMIFFVVVWLGIAVWVVRTRPEVLEARARLALEGEAEDGQGVPSGTRADR
Ga0316629_114585872	3300033483	Soil	MLQELAERTGASGWVIGSMIFFVVAWAVIAWRVFRARPGDMEARARLALEGDAEDGRTDPSGTQTKR
Ga0316629_115158402	3300033483	Soil	MLQELAAQTGASGWTIGAMIFFVAVWAVIAWRVYRARPEDLDARARLALEGEADDRQGGPPATRTDR
Ga0316621_105359942	3300033488	Soil	MLQELAAETGASGWAIGSMVFFVAAWAAIAWRVCRARPEDLDARARLALEGEADDRQGGPPATRTDR
Ga0316628_1010107313	3300033513	Soil	MLQELAAQTGASGWVIGSMIFFVAAWAVIAWRVYRARPEDLAARARLALEGDADDRQGSPPATRTDR
Ga0316616_1000493504	3300033521	Soil	MLQELAAQTGASLWVIGSMIFFVVAWLGIAVWVVRTRTDVLEARARLALEGEADNGQTVPPGTQPDR
Ga0316616_1005825601	3300033521	Soil	MLQELAAQTGASGWVIGSMIFFVAAWAVIAWRVYRARPEDLDARARLALEGDADDRQG
Ga0316616_1006132832	3300033521	Soil	MLQELAAQTGASGWVIGSMIFFVAAWAAIAWRVFRARPEDLEALARLALEGEAESRQGASPRTRTGR
Ga0316616_1012130022	3300033521	Soil	LQELAAQTGAGVWVIASMIFFVVAWLGIAVWVVRTRPEVLEARARLALEGEAEDRQEGPPATRADR
Ga0316616_1019208802	3300033521	Soil	MLQELAAQTGASALAIASMIFFMVAWVGIAVWVLRTRPEDLEARARLALEGEAENSQGVPPRTRTER
Ga0316616_1039548232	3300033521	Soil	MLQELAAETGAGGWAIASMLFFAVVWLVIARRVWRTRPEELEARARLALEGDGENGDGALTRGNHG
Ga0316617_1002922962	3300033557	Soil	MLQELAAQTGASGWVIGSMMFFVVAWAAIAWRVCRARPDDMEARARLALEGDGDAGHTGPSGTQTTR
Ga0316617_1019346551	3300033557	Soil	MLQELAAQTGAGGWAIASMLFFAVIWLVIAGRVLRARPEDMDARARLALEGDGENGDGALTR
Ga0373889_012164_637_840	3300034052	Sediment Slurry	VLQELAAQTGASGWVIGSMIFFVAAWAVIAWRVYRARPEDLDARARLALEGDADDRQGGPPATRTDR
Ga0373898_045268_140_343	3300034076	Sediment Slurry	VLQELAAQTGASGWVIGSMIFFVAAWAVIAWRVYRARPEDLDARARLALEGEADDRQGGPPATRTDR
Ga0373897_083467_377_622	3300034080	Sediment Slurry	GVRARGARFGEVNVLQELAARTGATGLAIASMLFFAVVWLVIAARVIRTRPEEMDAMARLALEGDADDGQGSPASGARTER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters