Sample 3300025991

Overview

Basic Information
IMG/M Taxon OID	3300025991 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111376 \| Gp0101392 \| Ga0210128
Sample Name	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordB_D2 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	137407292
Sequencing Scaffolds	28
Novel Protein Genes	30
Associated Families	27

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium	1
All Organisms → cellular organisms → Bacteria	4
Not Available	11
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Chryseobacterium → unclassified Chryseobacterium → Chryseobacterium sp.	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands → Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: San Francisco Bay, California
Coordinates	Lat. (^o)	38.15012	Long. (^o)	-122.438774	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F005940	Metagenome / Metatranscriptome	386	N
F008422	Metagenome / Metatranscriptome	333	Y
F009188	Metagenome / Metatranscriptome	322	Y
F009400	Metagenome / Metatranscriptome	318	Y
F012874	Metagenome / Metatranscriptome	276	Y
F017486	Metagenome / Metatranscriptome	240	N
F023829	Metagenome / Metatranscriptome	208	Y
F024678	Metagenome / Metatranscriptome	205	Y
F031307	Metagenome	183	Y
F039643	Metagenome	163	Y
F040630	Metagenome	161	Y
F043801	Metagenome / Metatranscriptome	155	Y
F044339	Metagenome / Metatranscriptome	154	Y
F047065	Metagenome / Metatranscriptome	150	Y
F050382	Metagenome / Metatranscriptome	145	Y
F056621	Metagenome	137	Y
F062788	Metagenome / Metatranscriptome	130	Y
F085724	Metagenome	111	Y
F086433	Metagenome / Metatranscriptome	110	Y
F087210	Metagenome / Metatranscriptome	110	Y
F087950	Metagenome / Metatranscriptome	110	Y
F088283	Metagenome / Metatranscriptome	109	Y
F093888	Metagenome / Metatranscriptome	106	Y
F099322	Metagenome / Metatranscriptome	103	Y
F100931	Metagenome / Metatranscriptome	102	Y
F105216	Metagenome / Metatranscriptome	100	Y
F106150	Metagenome / Metatranscriptome	100	N

Family

Category

Number of Sequences

3D Structure?

F005940

Metagenome / Metatranscriptome

386

F008422

Metagenome / Metatranscriptome

333

F009188

Metagenome / Metatranscriptome

322

F009400

Metagenome / Metatranscriptome

318

F012874

Metagenome / Metatranscriptome

276

F017486

Metagenome / Metatranscriptome

240

F023829

Metagenome / Metatranscriptome

208

F024678

Metagenome / Metatranscriptome

205

F031307

Metagenome

183

F039643

Metagenome

163

F040630

Metagenome

161

F043801

Metagenome / Metatranscriptome

155

F044339

Metagenome / Metatranscriptome

154

F047065

Metagenome / Metatranscriptome

150

F050382

Metagenome / Metatranscriptome

145

F056621

Metagenome

137

F062788

Metagenome / Metatranscriptome

130

F085724

Metagenome

111

F086433

Metagenome / Metatranscriptome

110

F087210

Metagenome / Metatranscriptome

110

F087950

Metagenome / Metatranscriptome

110

F088283

Metagenome / Metatranscriptome

109

F093888

Metagenome / Metatranscriptome

106

F099322

Metagenome / Metatranscriptome

103

F100931

Metagenome / Metatranscriptome

102

F105216

Metagenome / Metatranscriptome

100

F106150

Metagenome / Metatranscriptome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0210128_1010127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1343	Open in IMG/M
Ga0210128_1010650	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium	1316	Open in IMG/M
Ga0210128_1012793	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
Ga0210128_1016180	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
Ga0210128_1020653	Not Available	999	Open in IMG/M
Ga0210128_1022841	Not Available	956	Open in IMG/M
Ga0210128_1035068	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Chryseobacterium → unclassified Chryseobacterium → Chryseobacterium sp.	794	Open in IMG/M
Ga0210128_1036946	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
Ga0210128_1038412	Not Available	762	Open in IMG/M
Ga0210128_1043613	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	720	Open in IMG/M
Ga0210128_1043721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
Ga0210128_1044170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	716	Open in IMG/M
Ga0210128_1049549	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
Ga0210128_1050104	Not Available	677	Open in IMG/M
Ga0210128_1057375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
Ga0210128_1058418	Not Available	632	Open in IMG/M
Ga0210128_1064867	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
Ga0210128_1066949	Not Available	594	Open in IMG/M
Ga0210128_1067004	Not Available	594	Open in IMG/M
Ga0210128_1068754	Not Available	587	Open in IMG/M
Ga0210128_1071780	Not Available	576	Open in IMG/M
Ga0210128_1087827	Not Available	525	Open in IMG/M
Ga0210128_1088314	Not Available	524	Open in IMG/M
Ga0210128_1088821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	523	Open in IMG/M
Ga0210128_1090048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	519	Open in IMG/M
Ga0210128_1090191	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	519	Open in IMG/M
Ga0210128_1091429	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	515	Open in IMG/M
Ga0210128_1096327	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	503	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0210128_1010127

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

1343

Open in IMG/M

Ga0210128_1010650

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium

1316

Open in IMG/M

Ga0210128_1012793

All Organisms → cellular organisms → Bacteria

1221

Open in IMG/M

Ga0210128_1016180

All Organisms → cellular organisms → Bacteria

1107

Open in IMG/M

Ga0210128_1020653

Not Available

999

Open in IMG/M

Ga0210128_1022841

Not Available

956

Open in IMG/M

Ga0210128_1035068

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Chryseobacterium → unclassified Chryseobacterium → Chryseobacterium sp.

794

Open in IMG/M

Ga0210128_1036946

All Organisms → cellular organisms → Bacteria

775

Open in IMG/M

Ga0210128_1038412

Not Available

762

Open in IMG/M

Ga0210128_1043613

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1

720

Open in IMG/M

Ga0210128_1043721

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium

719

Open in IMG/M

Ga0210128_1044170

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium

716

Open in IMG/M

Ga0210128_1049549

All Organisms → cellular organisms → Bacteria → Proteobacteria

680

Open in IMG/M

Ga0210128_1050104

Not Available

677

Open in IMG/M

Ga0210128_1057375

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia

638

Open in IMG/M

Ga0210128_1058418

Not Available

632

Open in IMG/M

Ga0210128_1064867

All Organisms → cellular organisms → Bacteria

603

Open in IMG/M

Ga0210128_1066949

Not Available

594

Open in IMG/M

Ga0210128_1067004

Not Available

594

Open in IMG/M

Ga0210128_1068754

Not Available

587

Open in IMG/M

Ga0210128_1071780

Not Available

576

Open in IMG/M

Ga0210128_1087827

Not Available

525

Open in IMG/M

Ga0210128_1088314

Not Available

524

Open in IMG/M

Ga0210128_1088821

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales

523

519

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

519

Open in IMG/M

Ga0210128_1091429

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales

515

Open in IMG/M

Ga0210128_1096327

All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon

503

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0210128_1007482	Ga0210128_10074824	F087210	MRFLMGVLALAGAETALAHTPDTGFLSNFGHQLTSLHHSPAAMLLGVVVL
Ga0210128_1010127	Ga0210128_10101274	F040630	PKGRGILRPIKSQSFGILNFGHCDLPFDLAQSGGESFDFAQDREPVERLVEPFDICVLLFEFFNC
Ga0210128_1010650	Ga0210128_10106503	F024678	MESEVLMRIALKLFLFFIGMALSMLGISVAIHSAHMVLGVLILVSGITTIMGSLPSYE
Ga0210128_1012793	Ga0210128_10127934	F012874	MPAKAGIQNYLISLDSRLRGNDAKGVFKTFYETINLKSSIIMG
Ga0210128_1016180	Ga0210128_10161802	F050382	ETLNYNIQISNKIKSQLFEILNFGHCDLFGICVLLFAIF
Ga0210128_1020653	Ga0210128_10206532	F093888	QLSNVTGLPPIISICALVIIFSLILFGILISIKIRNIKKALNKLNDRLDTISQRLGRQPGEFQNIQPHKYKLGSHINNEIATDGRTSLEGSNTANIAQKNGFEEHRINTEISTKIHELLKKSDKPTLYHDLAKHLSKDYPDYNYDFFLKEVEDLQKEGKVEVQLIAGKLYFQIKKT
Ga0210128_1022841	Ga0210128_10228411	F009188	KPSDKAIAAVQWLYEQVGGELRPHSSFKQTQCPGDAWRQWIVEETTPELSNKAPDKVYIPDSFESKLDKILGKLENIERKLKLGKLIQ
Ga0210128_1035068	Ga0210128_10350681	F023829	MKIKLIRSYRSKNGNPTFVYGVTGSASDLDAFKTAQGDYYREDADGTALWFTTRCVGQVGQLIITTNGNVVPDMSAYDQAASLAAQYGGNFGAELAKSAAQAILGVASP
Ga0210128_1036946	Ga0210128_10369461	F047065	KVVSSSKTHMWECVYGAYVDHLSDISTDSLPEEIQIFYDSIKLRITSVEAFGHIDNDEASYIANDIMYMADVISSDLRKP
Ga0210128_1038412	Ga0210128_10384122	F039643	MRKFWKKQVEDLGGDPSVLIKGRTQVAKEKAIALVAAHKEAITVRNAGYVIGRAACIVKNPCLDFWQGVKE
Ga0210128_1043613	Ga0210128_10436131	F087950	MQCWINGPATGGIDDKIKMAIILLKTNIPAFHHSIIPFSGPIRKPQ
Ga0210128_1043721	Ga0210128_10437212	F005940	TIASGIGGDEEVMELVNGRWLTAKLTITTSDNTQSPELLSFAVRGFQLVNDLVVDMPINISDQVERPFRKALRINGQGELIYQALRNKEGQNVQLEIFRPDTLLRGIIENVSSPVEEISPRGSVTTYCLVRFRGSKVISTSSSGEGLGIGLLGVKRLG
Ga0210128_1044170	Ga0210128_10441701	F085724	MKTILTIVMVLGMTAVYEPDSIIPKYFVDKTPQGEYRVYNSKQIVVPKYIVKPDRWGNGYQVYETGKPVLPLYRIEKRK
Ga0210128_1049549	Ga0210128_10495491	F106150	YPILSTMKVYKSTDELSKELAEVKDTLEGFKKLVEIQKKEIFELKKYVSEDIKNKNLLQGYRKVIEDISYQVRK
Ga0210128_1050104	Ga0210128_10501041	F099322	GEGSVRMVLDGVSLIRYSDGAWCRVAPPSAHDLKDNWYRSSPSLLIRWLDAVGKVRPVKSNE
Ga0210128_1056982	Ga0210128_10569822	F100931	LPNLLKNLHLEELSLVDRPANAQAMVSLFKRDNSEEEITKMNEEMEAKVKAYMDDKGCGRGEAMKALGY
Ga0210128_1057375	Ga0210128_10573752	F086433	MVRIRRWFSGKRMTVIWEEPALPEFVKINPLSPPGAAEGGLQPGDITMAANAQEFLEAEGDETALPR
Ga0210128_1058418	Ga0210128_10584181	F105216	MPTTRFHALCCAAILTAACSDEAPKPWTTREMNALSEQFGHIAEAYAVVDVCIPMIEADKDAKRRVLSKIDVRRYSQLSQLDTEAELAKFLAHHRQSGGTDEQAAALDQTYRESHQAAAQLLTSLDSCVETVIDYSNTILNTRVSTT
Ga0210128_1064867	Ga0210128_10648673	F062788	YQIAYASITGPTICNMAQGPIILEESDILKIETSDTAGISAAISLLELNRE
Ga0210128_1066949	Ga0210128_10669491	F017486	MNKIIITNAHAHGFAFACDTETQGQVFIPVHIADSFDLAPGDEINAVLVPNYQDKSDKGTPWQAVKLQRDNEVCEKAIIDNSQTLNNEALDAEMFTYILAGGYHTTAELADYFELDHKTAGNAAQRLFNSGKIAKADVFNRVGQKRPTIILWAAAAKTFIEVV
Ga0210128_1067004	Ga0210128_10670041	F009400	MSWMTGLNEIALSLWVGLDYFFFPLLILQLVAGLLARRLLPAGTPT
Ga0210128_1068754	Ga0210128_10687541	F044339	MLITLTLVVGELTDAGQRGHAVGAQAAIMVAQAVRSAEAVSSVIDGSGDRGAASDGFRTYMMMLLVGAPVLIDDPVARRFLEQAQYLGGVMARTLAVIDRSPGGPAAPGDGLDDAVRQLQSAAAPLLALLSPGIRDSIERIGQTTEE
Ga0210128_1071780	Ga0210128_10717801	F047065	MTDLLNEFSKAAMAVSSRKTQMWECVKQAYVDHLSDISTDSLPEEIQIFYDSVKLRITSVEALGHIDNDEAGYIANDIMYMADVIRSGLIKP
Ga0210128_1087827	Ga0210128_10878271	F039643	MRKFWKKQVEDLGGDPSVLIKSRTQLAKEMFIELVAAHKEAITVRNAGYVIGRAACIVKNPCVEFYKGVREGLNS
Ga0210128_1088314	Ga0210128_10883141	F043801	MFMAEKFTGVCPCGFSFTTPAGKDDAVAVMKYHAELQHKKEYPNGATTAEAMKYIKKV
Ga0210128_1088821	Ga0210128_10888211	F088283	VVPFLAACAGCATDADVAGMYVPSCVAFEGNTIELTDQRFTWDKFTDEVTVDAAGNEVDPFPGFPVRGTYTIENDVLHLTTDVGDLAALLHLVRRPGQVYLLTVTEFEAWQKGGTVPNCALLLGAGE
Ga0210128_1090048	Ga0210128_10900481	F085724	MRTLLIGMIVLGMTAVYEPNSIIPKYFVDKTPQGEYRVYDSKQIVVPKYIVKPDPWGKGYQVYETGKPVLPVYRIERKXTEAPTN
Ga0210128_1090191	Ga0210128_10901912	F056621	LNDKERFALAERIQKMTQEKHAHFRLIKRRDEIENELQVKIEDRGS
Ga0210128_1091429	Ga0210128_10914292	F008422	MGMTYQKGDVFLDKVTHKLYIFDGNEWLEIVPTSVLKKPDWT
Ga0210128_1096327	Ga0210128_10963272	F031307	LSKINTYFGFKNGKLVSVLQSVNSDAKKAIDCTYYIAQPQEFEKQIEKWKKEKTEEE

Scaffold ID

Protein ID

Family

Sequence

Ga0210128_1007482

Ga0210128_10074824

F087210

MRFLMGVLALAGAETALAHTPDTGFLSNFGHQLTSLHHSPAAMLLGVVVL

Ga0210128_1010127

Ga0210128_10101274

F040630

PKGRGILRPIKSQSFGILNFGHCDLPFDLAQSGGESFDFAQDREPVERLVEPFDICVLLFEFFNC

Ga0210128_1010650

Ga0210128_10106503

F024678

MESEVLMRIALKLFLFFIGMALSMLGISVAIHSAHMVLGVLILVSGITTIMGSLPSYE

Ga0210128_1012793

Ga0210128_10127934

F012874

MPAKAGIQNYLISLDSRLRGNDAKGVFKTFYETINLKSSIIMG

Ga0210128_1016180

Ga0210128_10161802

F050382

ETLNYNIQISNKIKSQLFEILNFGHCDLFGICVLLFAIF

Ga0210128_1020653

Ga0210128_10206532

F093888

QLSNVTGLPPIISICALVIIFSLILFGILISIKIRNIKKALNKLNDRLDTISQRLGRQPGEFQNIQPHKYKLGSHINNEIATDGRTSLEGSNTANIAQKNGFEEHRINTEISTKIHELLKKSDKPTLYHDLAKHLSKDYPDYNYDFFLKEVEDLQKEGKVEVQLIAGKLYFQIKKT

Ga0210128_1022841

Ga0210128_10228411

F009188

KPSDKAIAAVQWLYEQVGGELRPHSSFKQTQCPGDAWRQWIVEETTPELSNKAPDKVYIPDSFESKLDKILGKLENIERKLKLGKLIQ

Ga0210128_1035068

Ga0210128_10350681

F023829

MKIKLIRSYRSKNGNPTFVYGVTGSASDLDAFKTAQGDYYREDADGTALWFTTRCVGQVGQLIITTNGNVVPDMSAYDQAASLAAQYGGNFGAELAKSAAQAILGVASP

Ga0210128_1036946

Ga0210128_10369461

F047065

KVVSSSKTHMWECVYGAYVDHLSDISTDSLPEEIQIFYDSIKLRITSVEAFGHIDNDEASYIANDIMYMADVISSDLRKP

Ga0210128_1038412

Ga0210128_10384122

F039643

MRKFWKKQVEDLGGDPSVLIKGRTQVAKEKAIALVAAHKEAITVRNAGYVIGRAACIVKNPCLDFWQGVKE

Ga0210128_1043613

Ga0210128_10436131

F087950

MQCWINGPATGGIDDKIKMAIILLKTNIPAFHHSIIPFSGPIRKPQ

Ga0210128_1043721

Ga0210128_10437212

F005940

TIASGIGGDEEVMELVNGRWLTAKLTITTSDNTQSPELLSFAVRGFQLVNDLVVDMPINISDQVERPFRKALRINGQGELIYQALRNKEGQNVQLEIFRPDTLLRGIIENVSSPVEEISPRGSVTTYCLVRFRGSKVISTSSSGEGLGIGLLGVKRLG

Ga0210128_1044170

Ga0210128_10441701

F085724

MKTILTIVMVLGMTAVYEPDSIIPKYFVDKTPQGEYRVYNSKQIVVPKYIVKPDRWGNGYQVYETGKPVLPLYRIEKRK

Ga0210128_1049549

Ga0210128_10495491

F106150

YPILSTMKVYKSTDELSKELAEVKDTLEGFKKLVEIQKKEIFELKKYVSEDIKNKNLLQGYRKVIEDISYQVRK

Ga0210128_1050104

Ga0210128_10501041

F099322

GEGSVRMVLDGVSLIRYSDGAWCRVAPPSAHDLKDNWYRSSPSLLIRWLDAVGKVRPVKSNE

Ga0210128_1056982

Ga0210128_10569822

F100931

LPNLLKNLHLEELSLVDRPANAQAMVSLFKRDNSEEEITKMNEEMEAKVKAYMDDKGCGRGEAMKALGY

Ga0210128_1057375

Ga0210128_10573752

F086433

MVRIRRWFSGKRMTVIWEEPALPEFVKINPLSPPGAAEGGLQPGDITMAANAQEFLEAEGDETALPR

Ga0210128_1058418

Ga0210128_10584181

F105216

MPTTRFHALCCAAILTAACSDEAPKPWTTREMNALSEQFGHIAEAYAVVDVCIPMIEADKDAKRRVLSKIDVRRYSQLSQLDTEAELAKFLAHHRQSGGTDEQAAALDQTYRESHQAAAQLLTSLDSCVETVIDYSNTILNTRVSTT

Ga0210128_1064867

Ga0210128_10648673

F062788

YQIAYASITGPTICNMAQGPIILEESDILKIETSDTAGISAAISLLELNRE

Ga0210128_1066949

Ga0210128_10669491

F017486

MNKIIITNAHAHGFAFACDTETQGQVFIPVHIADSFDLAPGDEINAVLVPNYQDKSDKGTPWQAVKLQRDNEVCEKAIIDNSQTLNNEALDAEMFTYILAGGYHTTAELADYFELDHKTAGNAAQRLFNSGKIAKADVFNRVGQKRPTIILWAAAAKTFIEVV

Ga0210128_1067004

Ga0210128_10670041

F009400

MSWMTGLNEIALSLWVGLDYFFFPLLILQLVAGLLARRLLPAGTPT

Ga0210128_1068754

Ga0210128_10687541

F044339

MLITLTLVVGELTDAGQRGHAVGAQAAIMVAQAVRSAEAVSSVIDGSGDRGAASDGFRTYMMMLLVGAPVLIDDPVARRFLEQAQYLGGVMARTLAVIDRSPGGPAAPGDGLDDAVRQLQSAAAPLLALLSPGIRDSIERIGQTTEE

Ga0210128_1071780

Ga0210128_10717801

F047065

MTDLLNEFSKAAMAVSSRKTQMWECVKQAYVDHLSDISTDSLPEEIQIFYDSVKLRITSVEALGHIDNDEAGYIANDIMYMADVIRSGLIKP

Ga0210128_1087827

Ga0210128_10878271

F039643

MRKFWKKQVEDLGGDPSVLIKSRTQLAKEMFIELVAAHKEAITVRNAGYVIGRAACIVKNPCVEFYKGVREGLNS

Ga0210128_1088314

Ga0210128_10883141

F043801

MFMAEKFTGVCPCGFSFTTPAGKDDAVAVMKYHAELQHKKEYPNGATTAEAMKYIKKV

Ga0210128_1088821

Ga0210128_10888211

F088283

VVPFLAACAGCATDADVAGMYVPSCVAFEGNTIELTDQRFTWDKFTDEVTVDAAGNEVDPFPGFPVRGTYTIENDVLHLTTDVGDLAALLHLVRRPGQVYLLTVTEFEAWQKGGTVPNCALLLGAGE

Ga0210128_1090048

Ga0210128_10900481

F085724

MRTLLIGMIVLGMTAVYEPNSIIPKYFVDKTPQGEYRVYDSKQIVVPKYIVKPDPWGKGYQVYETGKPVLPVYRIERKXTEAPTN

Ga0210128_1090191

Ga0210128_10901912

F056621

LNDKERFALAERIQKMTQEKHAHFRLIKRRDEIENELQVKIEDRGS

Ga0210128_1091429

Ga0210128_10914292

F008422

MGMTYQKGDVFLDKVTHKLYIFDGNEWLEIVPTSVLKKPDWT

Ga0210128_1096327

Ga0210128_10963272

F031307

LSKINTYFGFKNGKLVSVLQSVNSDAKKAIDCTYYIAQPQEFEKQIEKWKKEKTEEE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300025991: Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordB_D2 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences