Sample 3300023063

Overview

Basic Information
IMG/M Taxon OID	3300023063 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0132900 \| Gp0272138 \| Ga0233335
Sample Name	Leaf litter microbial communities from Shasta-Trinity National Forest, California, United States - GEON-DECOMP-222
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	197356059
Sequencing Scaffolds	22
Novel Protein Genes	23
Associated Families	18

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium rosa	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Rutstroemiaceae → Rutstroemia → unclassified Rutstroemia → Rutstroemia sp. NJR-2017a WRK4	1
Not Available	12
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Rhizophoraceae → Rhizophora → Rhizophora mucronata	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil And Plant Litter Microbial Communities From Temperate Forests In California, United States
Type	Environmental
Taxonomy	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Leaf Litter → Soil And Plant Litter Microbial Communities From Temperate Forests In California, United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	forest biome → litter layer → plant litter
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	USA: California
Coordinates	Lat. (^o)	40.2526	Long. (^o)	-123.026	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F011735	Metagenome / Metatranscriptome	287	Y
F013050	Metagenome / Metatranscriptome	275	Y
F014824	Metagenome / Metatranscriptome	259	Y
F015054	Metagenome	257	Y
F020197	Metagenome / Metatranscriptome	225	Y
F023377	Metagenome / Metatranscriptome	210	Y
F024826	Metagenome / Metatranscriptome	204	Y
F030315	Metagenome / Metatranscriptome	185	Y
F039163	Metagenome / Metatranscriptome	164	Y
F044585	Metagenome / Metatranscriptome	154	Y
F056350	Metagenome / Metatranscriptome	137	Y
F058438	Metagenome / Metatranscriptome	135	Y
F061214	Metagenome / Metatranscriptome	132	Y
F075510	Metagenome / Metatranscriptome	118	N
F085031	Metagenome	111	Y
F091248	Metagenome	107	N
F092248	Metagenome / Metatranscriptome	107	Y
F106076	Metagenome / Metatranscriptome	100	Y

Family

Category

Number of Sequences

3D Structure?

F011735

Metagenome / Metatranscriptome

287

F013050

Metagenome / Metatranscriptome

275

F014824

Metagenome / Metatranscriptome

259

F015054

Metagenome

257

F020197

Metagenome / Metatranscriptome

225

F023377

Metagenome / Metatranscriptome

210

F024826

Metagenome / Metatranscriptome

204

F030315

Metagenome / Metatranscriptome

185

F039163

Metagenome / Metatranscriptome

164

F044585

Metagenome / Metatranscriptome

154

F056350

Metagenome / Metatranscriptome

137

F058438

Metagenome / Metatranscriptome

135

F061214

Metagenome / Metatranscriptome

132

F075510

Metagenome / Metatranscriptome

118

F085031

Metagenome

111

F091248

Metagenome

107

F092248

Metagenome / Metatranscriptome

107

F106076

Metagenome / Metatranscriptome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0233335_1000024	All Organisms → cellular organisms → Bacteria	76590	Open in IMG/M
Ga0233335_1000652	All Organisms → cellular organisms → Eukaryota	6435	Open in IMG/M
Ga0233335_1000761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium rosa	6078	Open in IMG/M
Ga0233335_1004430	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3028	Open in IMG/M
Ga0233335_1006889	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Rutstroemiaceae → Rutstroemia → unclassified Rutstroemia → Rutstroemia sp. NJR-2017a WRK4	2513	Open in IMG/M
Ga0233335_1008819	Not Available	2240	Open in IMG/M
Ga0233335_1030185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1115	Open in IMG/M
Ga0233335_1035105	Not Available	1008	Open in IMG/M
Ga0233335_1036701	Not Available	979	Open in IMG/M
Ga0233335_1039145	Not Available	937	Open in IMG/M
Ga0233335_1045563	Not Available	843	Open in IMG/M
Ga0233335_1053643	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	755	Open in IMG/M
Ga0233335_1053898	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	752	Open in IMG/M
Ga0233335_1055285	Not Available	740	Open in IMG/M
Ga0233335_1059485	Not Available	704	Open in IMG/M
Ga0233335_1060846	Not Available	692	Open in IMG/M
Ga0233335_1069176	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Rhizophoraceae → Rhizophora → Rhizophora mucronata	635	Open in IMG/M
Ga0233335_1071660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	620	Open in IMG/M
Ga0233335_1072684	Not Available	615	Open in IMG/M
Ga0233335_1073766	Not Available	609	Open in IMG/M
Ga0233335_1078390	Not Available	584	Open in IMG/M
Ga0233335_1089848	Not Available	534	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0233335_1000024

All Organisms → cellular organisms → Bacteria

76590

Open in IMG/M

Ga0233335_1000652

All Organisms → cellular organisms → Eukaryota

6435

Open in IMG/M

Ga0233335_1000761

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium rosa

6078

Open in IMG/M

Ga0233335_1004430

All Organisms → cellular organisms → Eukaryota → Opisthokonta

3028

Open in IMG/M

Ga0233335_1006889

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Rutstroemiaceae → Rutstroemia → unclassified Rutstroemia → Rutstroemia sp. NJR-2017a WRK4

2513

Open in IMG/M

Ga0233335_1008819

Not Available

2240

Open in IMG/M

Ga0233335_1030185

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium

1115

Open in IMG/M

Ga0233335_1035105

Not Available

1008

Open in IMG/M

Ga0233335_1036701

Not Available

979

Open in IMG/M

Ga0233335_1039145

Not Available

937

Open in IMG/M

Ga0233335_1045563

Not Available

843

Open in IMG/M

Ga0233335_1053643

All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium

755

Open in IMG/M

Ga0233335_1053898

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea

752

Open in IMG/M

Ga0233335_1055285

Not Available

740

Open in IMG/M

Ga0233335_1059485

Not Available

704

Open in IMG/M

Ga0233335_1060846

Not Available

692

Open in IMG/M

Ga0233335_1069176

All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Rhizophoraceae → Rhizophora → Rhizophora mucronata

635

Open in IMG/M

Ga0233335_1071660

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium

620

Open in IMG/M

Ga0233335_1072684

Not Available

615

Open in IMG/M

Ga0233335_1073766

Not Available

609

Open in IMG/M

Ga0233335_1078390

Not Available

584

Open in IMG/M

Ga0233335_1089848

Not Available

534

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0233335_1000024	Ga0233335_100002429	F020197	MKDNMSDQDSTPFSVGYVLRTTAKHMRKSIDMSIRKTFDRMPEFHGNQEKSTEVLQALDALHKMRGMLDDFQLHNKHIFNKE
Ga0233335_1000652	Ga0233335_10006523	F092248	LLRLLLPLSDMVYLIFRTEHEAPRSPKGSPDHSKSVGATGGVYKGQGLNQRKVMTCAY
Ga0233335_1000761	Ga0233335_10007614	F085031	MAQTEKPLREQMTDAMDAISKQLDLLRSGPTIGGPSDDRSVIAELEAEFQELKEARASL
Ga0233335_1004430	Ga0233335_10044301	F013050	MSKGKQPRTRVNKVPKLLLSEIKAVFIPSGQGIGLEAAIF
Ga0233335_1006889	Ga0233335_10068893	F106076	MVNEETVYSTPWKPVKTIAKKTVASIPFKAPLLFPCIKEWCAYVTVTPDDSNITVLSRGNSKGFTATIPIGGHCPPSSMVGDKALXKYAQNIAKKNRASETINRATPMFNPCCTAKVWLPKYVPSLITSRHQKDIDRTRDKKAVIKNXDELPKPCIVKTALVVKANNDIQQYNGQGDGDTKXNGXDXKLLLIKFVIIKILLMDSLVXLYL
Ga0233335_1008819	Ga0233335_10088192	F030315	VIKYNEFIIIIKYEDILLIKNDVDALKYNYRIGLDTLLVYTIKYEY
Ga0233335_1030185	Ga0233335_10301851	F075510	XKSGVFTFLILQVVTFFGLVLCCTHLSEITLTIAANIVHTAFMFHGKFYXXIFTDKNLNTDTLIRLAYGHYLSAFYMAYLGVLHGIDMHYDWKNEATYDGLESEMSXXDEALMNEIGTFLEAVFILNIICWXLYPEPEALSYEIFMXGDIGMVSDVRFYGVAPHXYFRPYMAXLIVCPHHKTGIFGLVFLFFVLFHQPTLHGVNEHGLYYKRRLLFTSRRVKQKVFFKQAPLNVELNLYYQTTYAFFIMCALYTNTFLPYGRFYNRLGGNVGMLSSYLYVFLYLSVTSLRRPYXFELYFYFIYNKCNFLKNTKVAYIPRTHDQLK
Ga0233335_1035105	Ga0233335_10351051	F091248	MSKRQKKKAPAVEEVPAPDTEARIEYIYEDTQCVTGVEPEYKWGDIYRLISRREVPDMGLEEAPIYANIEKSAIMKVATRPELFPCSELMRWVLPHTNHNSMLICNVDGQGYAAFSPGYVALAYHLPEPQLFLTDRWLDDLRMDLVETLKRMLLPGKIFRHRVTEDYDTATLRPTYRFIALMLNRIFGRANGRLFKLEWVPLMFFIATEGTIFNWASIVSSNLSSCVAAASEGKERRRSEFYMSSILIDCILCHQSFPGLKCVWEKNRMP
Ga0233335_1036701	Ga0233335_10367011	F058438	VPDALEKLPLSPVLASQLETMVPSGSWLTGRMFPTAREAIQ
Ga0233335_1039145	Ga0233335_10391451	F091248	MSKRQKKKAPAVEEVPAPDTEAKTEYIYEDTQCVTGVELEYKWGEIYRLISRREVPDMGLEEAPIYTNIEKSAIMKVATRPELFPCPEVMRWVLPNTNHNSMLMCNVEGQGYAAFSPGYVALAYHLPKPHLFLTNDWLDNLRMDFVETMKRMLLPGKLYRHRATEEYDTASLRPTYRFIALMLNRIFGRANCRLFKFEWIPLMFYVATEGTIFNWASIVSSSLSSCVAATLEGEARKRSE
Ga0233335_1045563	Ga0233335_10455632	F061214	VISALCRLVNGFAEITICLALKETPINGGLTYEGPKVA
Ga0233335_1053643	Ga0233335_10536431	F024826	MADATPYFGIAPFVLGMSRDVVRAAAGKPDSVETSSDEGESVETWFYQGGEIELEFEAVPDSKLESITAWSSDTTVNGIAIIGCDADDLPRLAAEADIRDLELTDDFADSGQCWQSEQHGLMLWAAKGKIVNLTIFPRFD
Ga0233335_1053898	Ga0233335_10538982	F014824	PSYSTHLNLPNNHSIIILKVTKNKNTTILIIKPFIHKTNGVIDIIINSKSKIKKIIQKIKNRRETGNTLTLKESKPHSKVSLLINLDLTKNLPKPMIIGTNKEINK
Ga0233335_1055285	Ga0233335_10552851	F091248	MSRRQKKKAPVVEEQTTIEAVLPTEYIYEDTQCVMGVDPEYKWGDIYRMISHREVPDMGLEEEPIYANIEKSAIMKVATRPEMFPCAELMRWILPHTNHGSMLICNVEGQGYASFSPGYVALAYHLPEPQVFLSNEWLDNLKMDLIETMRKMLLPGKLYRHRATEDYDTATLRPPYRFIALML
Ga0233335_1059485	Ga0233335_10594851	F015054	ISWKSRVLILGENDPLKLVNEKVQEQDVEEDKSHWRKSDARARRILVNSVRDHLVTQILQTKTTMKMFKTLKE
Ga0233335_1060846	Ga0233335_10608461	F015054	MIGMKVEDHLDGATNFISWKSRVLILGENDLLKLVNEKVTEQDVEEDKSDWRKSDARARRILVNSVRDHLVHQILQRKATMKMFNTLKE
Ga0233335_1069176	Ga0233335_10691761	F013050	MSKGKQPRTRTNKVPKLLLSEIKEVIIKYVQGIGLEAAIFXRS
Ga0233335_1071660	Ga0233335_10716601	F056350	LAWYQRTYFNVNIGNLIKYFAVLTTAFHDVHSLFGFFIILVVFSQLVSGTMLSFSLVPESMMVPMVRDEEDIEDLYTDDFFXIHERGVDLLFIFSXLHLFRKLYI
Ga0233335_1072684	Ga0233335_10726842	F023377	MTHRPACSLRAIRMAMLAALALFAAAAHAMSVSYQCTGRRPLVAELTPREGQIHFEGQDWTVTRIPSGREARYLNKRAGVTVVTQKREMTFTHGAETLQCFLKSDALPGDAPQQTH
Ga0233335_1073766	Ga0233335_10737661	F044585	MSAAELDHLALTALRLLPDEPERAMRLWDDAFARASEPGRDDVARSLLRLRIVRMHHQARFGDRESLGPPMLATAAEARAHGWRVESLLVDLLEVYLATLGSNPDDGLGDVEAIRAEAEAHLDPIELSWMELMAGHFSGTMLGWAQEPERAYRALNRLVASPQAPPGLVANVQMNIGH
Ga0233335_1078390	Ga0233335_10783901	F039163	AERSIDHIGSEKTPIRIVQQWGILVNGLTAEPATWGNE
Ga0233335_1088584	Ga0233335_10885841	F091248	EGPEVEEATKTEYIYEYTQCVSGVEPEYKWGEVYRLISHREVPDMGLEEESIYDNIEKSALMKVATRPELFPCSEVIGWILPRVDTSTIIIGNVEGQGYAAFSPGYVALAYHLPEAQVFLSDDWLDSIRMDLVETLKKMLLEGKLYRYRQTGEYDTARLRAPYRFIALMLNRIFGRAHG
Ga0233335_1089848	Ga0233335_10898481	F011735	MWYGPFVISKVLEKGAYELVDYDGIPLGKPRNGLYLKRYYA

Scaffold ID

Protein ID

Family

Sequence

Ga0233335_1000024

Ga0233335_100002429

F020197

MKDNMSDQDSTPFSVGYVLRTTAKHMRKSIDMSIRKTFDRMPEFHGNQEKSTEVLQALDALHKMRGMLDDFQLHNKHIFNKE

Ga0233335_1000652

Ga0233335_10006523

F092248

LLRLLLPLSDMVYLIFRTEHEAPRSPKGSPDHSKSVGATGGVYKGQGLNQRKVMTCAY

Ga0233335_1000761

Ga0233335_10007614

F085031

MAQTEKPLREQMTDAMDAISKQLDLLRSGPTIGGPSDDRSVIAELEAEFQELKEARASL

Ga0233335_1004430

Ga0233335_10044301

F013050

MSKGKQPRTRVNKVPKLLLSEIKAVFIPSGQGIGLEAAIF

Ga0233335_1006889

Ga0233335_10068893

F106076

MVNEETVYSTPWKPVKTIAKKTVASIPFKAPLLFPCIKEWCAYVTVTPDDSNITVLSRGNSKGFTATIPIGGHCPPSSMVGDKALXKYAQNIAKKNRASETINRATPMFNPCCTAKVWLPKYVPSLITSRHQKDIDRTRDKKAVIKNXDELPKPCIVKTALVVKANNDIQQYNGQGDGDTKXNGXDXKLLLIKFVIIKILLMDSLVXLYL

Ga0233335_1008819

Ga0233335_10088192

F030315

VIKYNEFIIIIKYEDILLIKNDVDALKYNYRIGLDTLLVYTIKYEY

Ga0233335_1030185

Ga0233335_10301851

F075510

XKSGVFTFLILQVVTFFGLVLCCTHLSEITLTIAANIVHTAFMFHGKFYXXIFTDKNLNTDTLIRLAYGHYLSAFYMAYLGVLHGIDMHYDWKNEATYDGLESEMSXXDEALMNEIGTFLEAVFILNIICWXLYPEPEALSYEIFMXGDIGMVSDVRFYGVAPHXYFRPYMAXLIVCPHHKTGIFGLVFLFFVLFHQPTLHGVNEHGLYYKRRLLFTSRRVKQKVFFKQAPLNVELNLYYQTTYAFFIMCALYTNTFLPYGRFYNRLGGNVGMLSSYLYVFLYLSVTSLRRPYXFELYFYFIYNKCNFLKNTKVAYIPRTHDQLK

Ga0233335_1035105

Ga0233335_10351051

F091248

MSKRQKKKAPAVEEVPAPDTEARIEYIYEDTQCVTGVEPEYKWGDIYRLISRREVPDMGLEEAPIYANIEKSAIMKVATRPELFPCSELMRWVLPHTNHNSMLICNVDGQGYAAFSPGYVALAYHLPEPQLFLTDRWLDDLRMDLVETLKRMLLPGKIFRHRVTEDYDTATLRPTYRFIALMLNRIFGRANGRLFKLEWVPLMFFIATEGTIFNWASIVSSNLSSCVAAASEGKERRRSEFYMSSILIDCILCHQSFPGLKCVWEKNRMP

Ga0233335_1036701

Ga0233335_10367011

F058438

VPDALEKLPLSPVLASQLETMVPSGSWLTGRMFPTAREAIQ

Ga0233335_1039145

Ga0233335_10391451

F091248

MSKRQKKKAPAVEEVPAPDTEAKTEYIYEDTQCVTGVELEYKWGEIYRLISRREVPDMGLEEAPIYTNIEKSAIMKVATRPELFPCPEVMRWVLPNTNHNSMLMCNVEGQGYAAFSPGYVALAYHLPKPHLFLTNDWLDNLRMDFVETMKRMLLPGKLYRHRATEEYDTASLRPTYRFIALMLNRIFGRANCRLFKFEWIPLMFYVATEGTIFNWASIVSSSLSSCVAATLEGEARKRSE

Ga0233335_1045563

Ga0233335_10455632

F061214

VISALCRLVNGFAEITICLALKETPINGGLTYEGPKVA

Ga0233335_1053643

Ga0233335_10536431

F024826

MADATPYFGIAPFVLGMSRDVVRAAAGKPDSVETSSDEGESVETWFYQGGEIELEFEAVPDSKLESITAWSSDTTVNGIAIIGCDADDLPRLAAEADIRDLELTDDFADSGQCWQSEQHGLMLWAAKGKIVNLTIFPRFD

Ga0233335_1053898

Ga0233335_10538982

F014824

PSYSTHLNLPNNHSIIILKVTKNKNTTILIIKPFIHKTNGVIDIIINSKSKIKKIIQKIKNRRETGNTLTLKESKPHSKVSLLINLDLTKNLPKPMIIGTNKEINK

Ga0233335_1055285

Ga0233335_10552851

F091248

MSRRQKKKAPVVEEQTTIEAVLPTEYIYEDTQCVMGVDPEYKWGDIYRMISHREVPDMGLEEEPIYANIEKSAIMKVATRPEMFPCAELMRWILPHTNHGSMLICNVEGQGYASFSPGYVALAYHLPEPQVFLSNEWLDNLKMDLIETMRKMLLPGKLYRHRATEDYDTATLRPPYRFIALML

Ga0233335_1059485

Ga0233335_10594851

F015054

ISWKSRVLILGENDPLKLVNEKVQEQDVEEDKSHWRKSDARARRILVNSVRDHLVTQILQTKTTMKMFKTLKE

Ga0233335_1060846

Ga0233335_10608461

F015054

MIGMKVEDHLDGATNFISWKSRVLILGENDLLKLVNEKVTEQDVEEDKSDWRKSDARARRILVNSVRDHLVHQILQRKATMKMFNTLKE

Ga0233335_1069176

Ga0233335_10691761

F013050

MSKGKQPRTRTNKVPKLLLSEIKEVIIKYVQGIGLEAAIFXRS

Ga0233335_1071660

Ga0233335_10716601

F056350

LAWYQRTYFNVNIGNLIKYFAVLTTAFHDVHSLFGFFIILVVFSQLVSGTMLSFSLVPESMMVPMVRDEEDIEDLYTDDFFXIHERGVDLLFIFSXLHLFRKLYI

Ga0233335_1072684

Ga0233335_10726842

F023377

MTHRPACSLRAIRMAMLAALALFAAAAHAMSVSYQCTGRRPLVAELTPREGQIHFEGQDWTVTRIPSGREARYLNKRAGVTVVTQKREMTFTHGAETLQCFLKSDALPGDAPQQTH

Ga0233335_1073766

Ga0233335_10737661

F044585

MSAAELDHLALTALRLLPDEPERAMRLWDDAFARASEPGRDDVARSLLRLRIVRMHHQARFGDRESLGPPMLATAAEARAHGWRVESLLVDLLEVYLATLGSNPDDGLGDVEAIRAEAEAHLDPIELSWMELMAGHFSGTMLGWAQEPERAYRALNRLVASPQAPPGLVANVQMNIGH

Ga0233335_1078390

Ga0233335_10783901

F039163

AERSIDHIGSEKTPIRIVQQWGILVNGLTAEPATWGNE

Ga0233335_1088584

Ga0233335_10885841

F091248

EGPEVEEATKTEYIYEYTQCVSGVEPEYKWGEVYRLISHREVPDMGLEEESIYDNIEKSALMKVATRPELFPCSEVIGWILPRVDTSTIIIGNVEGQGYAAFSPGYVALAYHLPEAQVFLSDDWLDSIRMDLVETLKKMLLEGKLYRYRQTGEYDTARLRAPYRFIALMLNRIFGRAHG

Ga0233335_1089848

Ga0233335_10898481

F011735

MWYGPFVISKVLEKGAYELVDYDGIPLGKPRNGLYLKRYYA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300023063: Leaf litter microbial communities from Shasta-Trinity National Forest, California, United States - GEON-DECOMP-222

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences