Sample 3300008071

Overview

Basic Information
IMG/M Taxon OID	3300008071 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0118187 \| Gp0131413 \| Ga0110933
Sample Name	Wastewater microbial communities from the domestic sewers in Singapore - Site 1
Sequencing Status	Permanent Draft
Sequencing Center	Singapore Centre on Environmental Life Sciences Engineering (SCELSE)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	172086532
Sequencing Scaffolds	12
Novel Protein Genes	12
Associated Families	11

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	1
All Organisms → cellular organisms → Bacteria	2
Not Available	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2
All Organisms → Viruses	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Wastewater Microbial Communities From The Domestic Sewers
Type	Engineered
Taxonomy	Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From The Domestic Sewers

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Singapore
Coordinates	Lat. (^o)	1.3	Long. (^o)	103.8	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F010231	Metagenome	306	Y
F032274	Metagenome / Metatranscriptome	180	Y
F032312	Metagenome / Metatranscriptome	180	N
F050793	Metagenome	145	N
F051936	Metagenome	143	N
F052660	Metagenome	142	N
F066564	Metagenome / Metatranscriptome	126	Y
F068794	Metagenome / Metatranscriptome	124	N
F069722	Metagenome / Metatranscriptome	123	Y
F080163	Metagenome	115	N
F096611	Metagenome / Metatranscriptome	104	Y

Family

Category

Number of Sequences

3D Structure?

F010231

Metagenome

306

F032274

Metagenome / Metatranscriptome

180

F032312

Metagenome / Metatranscriptome

180

F050793

Metagenome

145

F051936

Metagenome

143

F052660

Metagenome

142

F066564

Metagenome / Metatranscriptome

126

F068794

Metagenome / Metatranscriptome

124

F069722

Metagenome / Metatranscriptome

123

F080163

Metagenome

115

F096611

Metagenome / Metatranscriptome

104

Scaffold	Taxonomy	Length	IMG/M Link
Ga0110933_1031854	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	1395	Open in IMG/M
Ga0110933_1044850	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
Ga0110933_1046560	Not Available	655	Open in IMG/M
Ga0110933_1051626	Not Available	1400	Open in IMG/M
Ga0110933_1089100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1005	Open in IMG/M
Ga0110933_1098992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	1012	Open in IMG/M
Ga0110933_1134812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	960	Open in IMG/M
Ga0110933_1153083	Not Available	505	Open in IMG/M
Ga0110933_1159649	Not Available	537	Open in IMG/M
Ga0110933_1163464	All Organisms → Viruses	561	Open in IMG/M
Ga0110933_1199706	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
Ga0110933_1305712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	566	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0110933_1031854

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia

1395

Open in IMG/M

Ga0110933_1044850

All Organisms → cellular organisms → Bacteria

1423

Open in IMG/M

Ga0110933_1046560

Not Available

655

Open in IMG/M

Ga0110933_1051626

Not Available

1400

Open in IMG/M

Ga0110933_1089100

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli

1005

Open in IMG/M

Ga0110933_1098992

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae

1012

Open in IMG/M

Ga0110933_1134812

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales

960

Open in IMG/M

Ga0110933_1153083

Not Available

505

Open in IMG/M

Ga0110933_1159649

Not Available

537

Open in IMG/M

Ga0110933_1163464

All Organisms → Viruses

561

Open in IMG/M

Ga0110933_1199706

All Organisms → cellular organisms → Bacteria

609

Open in IMG/M

Ga0110933_1305712

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales

566

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0110933_1031854	Ga0110933_10318543	F051936	MEQEGTGQVLFFPLALRGKAFGFSVLQEHAVMTLVISIFFATLIIRYLSIHISIKK*
Ga0110933_1044850	Ga0110933_10448502	F032312	MARIKDYDEDLSAPKILRRRDSKGRFIKKDLPPYLGAEQVLKPKNYYHFDSHGNYKGSSMNFDALVCLGFTWFKLLGVALMMLLWPIVFIYALNDGIEGYPFKKYAIPYIFILVAWFIIFLYGLVS*
Ga0110933_1046560	Ga0110933_10465601	F066564	METTLNLESKEKLDCNSIKKLLQKHLTAVDSIAVKQVSNISADNGITYIAKVLSNCDSKVLLSQVYSISKVLDQDCIAYSSSDSVIGKGFVGIKPYDKFDDELFIDYDSIKPLVTLK*
Ga0110933_1051626	Ga0110933_10516262	F096611	MRANEFISERKASPKLCRSTKKLGASDQSSCVAQGLRAHRSKGKGHTDGHGTYVKGKKMKSVHYGGSVEDYS*
Ga0110933_1089100	Ga0110933_10891002	F069722	MRVRLTAELDPKAKRERPDLDKGAAHEKALGHGSG
Ga0110933_1098992	Ga0110933_10989921	F080163	MKTIKFLQESFETKERFQQEISFKYSYNRDTVESIDFRINQRNIRYFYEAMQNFENSLVNEFKEKKNNFCNAKQFLESINDFDKIIFVIITYMKTYFDFCKDYSKISLHVHLVQFDFTTSVLIQGFYNYSHKDLSFSTKLESKVLDSEIELLQEKLDLIREEICKLIGVDPNLEKQGHEDNYVFNLNIESDNQIGFLLQETEL*
Ga0110933_1134812	Ga0110933_11348121	F052660	MCILRILPEKTPEKIGQERAGTEWTVVKSKIRLCIRNRSYGRFLHSGILMGIALPIPSHRAKSHDFACWWPAAAGHSRSADALPGKSNS*
Ga0110933_1153083	Ga0110933_11530831	F032274	KTMQVSFDFTEQTEIVKREKRKHLEARQDWQRAPKIIVTEEYIALDKKLEPIEEELFDLIKKMPLAIEKKIKGKICVIPSGLKTDEELISRVRELRKQASKIGKELDDLFLTIAIRGDAPR*
Ga0110933_1159649	Ga0110933_11596492	F068794	MAKKEKGLVFNHKTITIRGSFINMLFTMVLMILFIAAAFNDKIAANLKLIAELIIAIYAISYGVWQGKKFLEGKKEKKETDEESKE*
Ga0110933_1163464	Ga0110933_11634642	F068794	MNKKTKGFIINHQTITIRGSFINMLFTVVLMVLFVAAAFNASVAANLKLVAELIIAIYAISYGVWRGMKAWENKKEKKEEETT*
Ga0110933_1199706	Ga0110933_11997061	F010231	KQLVLTHAYVHWLADVHLAGFAPAFTLSLCDSECSRKPPNAHSLGRYVPYKHRTNQLSI*
Ga0110933_1305712	Ga0110933_13057121	F050793	IPLFAGYALRESSETLGGIVFVLSIALMVLGFISGRGDEKRLTAYWAKYQQIHRMDNLLRANLVGVWLCAEARVAVYREGSGYRVQLGVLDEKTGAWENDEQDEVFPTLADVREYASQEGYEPMDVDFGQMTDEEFQQFLDRSRI*

Scaffold ID

Protein ID

Family

Sequence

Ga0110933_1031854

Ga0110933_10318543

F051936

MEQEGTGQVLFFPLALRGKAFGFSVLQEHAVMTLVISIFFATLIIRYLSIHISIKK*

Ga0110933_1044850

Ga0110933_10448502

F032312

MARIKDYDEDLSAPKILRRRDSKGRFIKKDLPPYLGAEQVLKPKNYYHFDSHGNYKGSSMNFDALVCLGFTWFKLLGVALMMLLWPIVFIYALNDGIEGYPFKKYAIPYIFILVAWFIIFLYGLVS*

Ga0110933_1046560

Ga0110933_10465601

F066564

METTLNLESKEKLDCNSIKKLLQKHLTAVDSIAVKQVSNISADNGITYIAKVLSNCDSKVLLSQVYSISKVLDQDCIAYSSSDSVIGKGFVGIKPYDKFDDELFIDYDSIKPLVTLK*

Ga0110933_1051626

Ga0110933_10516262

F096611

MRANEFISERKASPKLCRSTKKLGASDQSSCVAQGLRAHRSKGKGHTDGHGTYVKGKKMKSVHYGGSVEDYS*

Ga0110933_1089100

Ga0110933_10891002

F069722

MRVRLTAELDPKAKRERPDLDKGAAHEKALGHGSG

Ga0110933_1098992

Ga0110933_10989921

F080163

MKTIKFLQESFETKERFQQEISFKYSYNRDTVESIDFRINQRNIRYFYEAMQNFENSLVNEFKEKKNNFCNAKQFLESINDFDKIIFVIITYMKTYFDFCKDYSKISLHVHLVQFDFTTSVLIQGFYNYSHKDLSFSTKLESKVLDSEIELLQEKLDLIREEICKLIGVDPNLEKQGHEDNYVFNLNIESDNQIGFLLQETEL*

Ga0110933_1134812

Ga0110933_11348121

F052660

MCILRILPEKTPEKIGQERAGTEWTVVKSKIRLCIRNRSYGRFLHSGILMGIALPIPSHRAKSHDFACWWPAAAGHSRSADALPGKSNS*

Ga0110933_1153083

Ga0110933_11530831

F032274

KTMQVSFDFTEQTEIVKREKRKHLEARQDWQRAPKIIVTEEYIALDKKLEPIEEELFDLIKKMPLAIEKKIKGKICVIPSGLKTDEELISRVRELRKQASKIGKELDDLFLTIAIRGDAPR*

Ga0110933_1159649

Ga0110933_11596492

F068794

MAKKEKGLVFNHKTITIRGSFINMLFTMVLMILFIAAAFNDKIAANLKLIAELIIAIYAISYGVWQGKKFLEGKKEKKETDEESKE*

Ga0110933_1163464

Ga0110933_11634642

F068794

MNKKTKGFIINHQTITIRGSFINMLFTVVLMVLFVAAAFNASVAANLKLVAELIIAIYAISYGVWRGMKAWENKKEKKEEETT*

Ga0110933_1199706

Ga0110933_11997061

F010231

KQLVLTHAYVHWLADVHLAGFAPAFTLSLCDSECSRKPPNAHSLGRYVPYKHRTNQLSI*

Ga0110933_1305712

Ga0110933_13057121

F050793

IPLFAGYALRESSETLGGIVFVLSIALMVLGFISGRGDEKRLTAYWAKYQQIHRMDNLLRANLVGVWLCAEARVAVYREGSGYRVQLGVLDEKTGAWENDEQDEVFPTLADVREYASQEGYEPMDVDFGQMTDEEFQQFLDRSRI*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300008071: Wastewater microbial communities from the domestic sewers in Singapore - Site 1

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences