3300007324: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_C4L_LD (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300007324
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123879 | Ga0099777
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_C4L_LD (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 158423740
• Sequencing Scaffolds: 17
• Novel Protein Genes: 18
• Associated Families: 16

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Thermoguttaceae → Thermogutta → Thermogutta terrifontis	1
Not Available	8
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Coccolithales → Coccolithaceae → Coccolithus → Coccolithus braarudii	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Dechloromonas	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1
All Organisms → cellular organisms → Bacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Austria: Klosterneuburg
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001758	Metagenome / Metatranscriptome	640	Y
F007073	Metagenome / Metatranscriptome	358	Y
F009934	Metagenome / Metatranscriptome	311	Y
F010686	Metagenome / Metatranscriptome	300	Y
F011207	Metagenome / Metatranscriptome	293	Y
F021769	Metagenome / Metatranscriptome	217	Y
F023533	Metagenome / Metatranscriptome	209	Y
F025291	Metagenome / Metatranscriptome	202	N
F051952	Metatranscriptome	143	N
F053088	Metagenome / Metatranscriptome	141	N
F070166	Metatranscriptome	123	N
F071145	Metagenome / Metatranscriptome	122	Y
F080202	Metagenome / Metatranscriptome	115	Y
F082715	Metagenome / Metatranscriptome	113	N
F091427	Metagenome / Metatranscriptome	107	Y
F105419	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0099777_1008493	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Thermoguttaceae → Thermogutta → Thermogutta terrifontis	1111
Ga0099777_1008839	Not Available	569
Ga0099777_1022871	Not Available	1004
Ga0099777_1055900	Not Available	639
Ga0099777_1075358	Not Available	901
Ga0099777_1109083	Not Available	541
Ga0099777_1227592	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	826
Ga0099777_1309247	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	869
Ga0099777_1322421	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	567
Ga0099777_1368818	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Coccolithales → Coccolithaceae → Coccolithus → Coccolithus braarudii	502
Ga0099777_1381805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	500
Ga0099777_1428249	Not Available	746
Ga0099777_1451818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Dechloromonas	516
Ga0099777_1452015	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1046
Ga0099777_1462253	All Organisms → cellular organisms → Bacteria	692
Ga0099777_1469454	Not Available	660
Ga0099777_1474606	Not Available	758

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099777_1008493	Ga0099777_10084932	F010686	VNHGGQAPKGVWGMSRHQEAMKGVEGCDKSGEAVKQALIPEFPS*
Ga0099777_1008839	Ga0099777_10088391	F071145	MRKLASIAGAALLAVTAFATPASAQSMSAGGSCGYQLGDYGMSDVNSDAFGPALHGVPSLFYQVNYSGVPAPTTVGVIIRYNGELESQTAVVPFTAENSGGSFEGALRANISPDAQGFANSLMSTFPGRGDNGTVSMK
Ga0099777_1022871	Ga0099777_10228711	F070166	GKDFSLTELAALFHNQLWLQVKCETDVHFKEKFGRSLEVLAKILKECNFSRGLQPRAISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEISKLPPKSFIGKGYRDHGTAPSPEIDGTPSWQEVGSEFSNLEREHTEAFLFLLKVIDNDPNVSIQERLQGLKRAIEVTERIKRIHPNWRNSQITEASKGRIIDAKKVKKVIP*
Ga0099777_1055900	Ga0099777_10559001	F009934	MREPLDGPAMRPETPLAVENGVGKLAAYTAPNVSMGKRAWRTPT
Ga0099777_1075358	Ga0099777_10753581	F051952	FPRQTIAPDHFTTTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLEDVVSANPQDRLNRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN*
Ga0099777_1099471	Ga0099777_10994711	F001758	SQVTGEKSGQAGWRDSSQAGAQVSGAEAEFTSSSGDVRASSVYAKKELGDEER*
Ga0099777_1109083	Ga0099777_11090831	F051952	DHFTSTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRSIFTSLEDVVSANPQDRLIRMREVFGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFPPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTSD
Ga0099777_1227592	Ga0099777_12275921	F091427	MLITGVYYAGISTTISLTNLLVTRRTLSMPGLRGRRILLPFTSITILLMLRALAIITPVLGSAMLMLLLDRH*
Ga0099777_1309247	Ga0099777_13092471	F021769	KNMKNLKLELFNFKQSLDFDRSDIAYIVEGHMNACNDLSEKTIIFSLNEKLKSFTYDDDVNTLLEGLNDDMSKYQLLYELKNLYSVLNSKNQGELYRQPINVLLQTINLDTDEDRMSKVLNELAIYDWVPEIKLFVYNLTKSPEQRSNLLSGGKSEVVYTIVEQVEDGHLAYIKDSWFLLTDDSIEKTLLENHVKDDNRMKTLRSLQTAMQFATINESRIDFRISEYLTIGLSVNDSTIFINEDELSEDTSLENLFSSPIVPIVNRNFYPLLVEVSNNIDSFVELDVVK
Ga0099777_1322421	Ga0099777_13224211	F011207	MPLPPPAAGGAGALGGILGGLGGLITCLCCLSALGLIGLWATFIPFVAFFKYAYDQETRAFGGSPSIQNLQQIVILLAVCLLTIRFVKRQMNT*
Ga0099777_1368818	Ga0099777_13688181	F023533	ISALELEQIADVAPVASYIPDSGVYDNPATDITPTLTLPATPSCTIRGQTIFEIRKMRTDARQIAMAISYEIQTMEKRKAYIEQMTNYLNDRIRELNKVKRDLAAEVKWVQVSNQRIAELAQKEKLIKLQDVMSCSRAEQERLNGEKDSKTFSVNSLAAQAAQLQSS
Ga0099777_1381805	Ga0099777_13818051	F082715	MKFMKRSLSLLISAMLLLACFALAEETPLLPIAIVSYDLTDEATTAALSALIEPKENALTRWERVVLSDGREAWVICQFDQTTMSNAWSRVIDAETQEVLQEDTTDTGFFATAQTRWESAKGIYALWSIQDKMLFDRLYAMAPCYGEPVEGDLI*
Ga0099777_1428249	Ga0099777_14282491	F007073	WTAKNRYGGVMYTCPKGDVLYGIYSNAGFLIGTINDRVVEGNWYEGGRGDRNDWQGSFRITLSADNLEFDGFWYRVTQDGAELRWHEQRLGAPWPSAPTHEQCLVPYDDDALTGTHYTVPGYGREPVTFALCKDRWDQMYGSFGSPDGYVEGWSVDNGSGFQGYKYDSDGRSGAFILRNVSPTEARGFYWRGRLATQNLATAEEVVLHRTSYTSHLEDCERVGPVSWKDYVVLPIALEH*
Ga0099777_1451818	Ga0099777_14518181	F053088	MNQSIEYFLAQAKHISDASPTLRIHGVLFNTTIGIVATGTIYGHQSARDGSHIRTSLIVGAHAVNGFHVIETKAGSNYLLARVGPSRSFRDQWRTLQEHLGANDRALADPPKSEFSAFDPGLMRARVPARAADFTRSRLPAD*
Ga0099777_1452015	Ga0099777_14520151	F105419	MRKLFALGALMVAAAVSNGCISNTMYGCEITETLAPGASEGEVVMKHGAPDNIVYLGNQYCNPQTGERGEVDKYLYEYRIGGGTTLLGWLFASDEFHNIAYLIEGGRVMGGGYVGEGKGSIILGNNFGVVSTPLGVFDMNFGGFVHPKARAGYGGDG
Ga0099777_1462253	Ga0099777_14622532	F080202	MAPAESGYILHLSSLSLTFVGFSALVVTLRSTLGGDLSDRHLRLVRLYIEGGLLLTALALVPT
Ga0099777_1469454	Ga0099777_14694541	F071145	MFLEEYMRKLSSIAGAALLAFTAFATPASAQSMSAGGSCGYSAGDYGFTDINSSKTMHAGESTVPALFYSVNYSGVPAPTTVGVIVRYNDELESQNAVAAFTAENSGGTFDGALRANISPEAQGGGNG
Ga0099777_1474606	Ga0099777_14746061	F025291	QPNQRRKQVTNGKTKHHMVNLQREINIFRESAWRVITYNYHLGDHSSTGLYTLNVGADQRYMSFQTLLSTDEFQNMSVVYNEYKIHKAVFTSLPTTNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSARIFAPKALTAQSCEWNLKGLGPNFGIWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK*