NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F080202

Metagenome / Metatranscriptome Family F080202

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F080202
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 68 residues
Representative Sequence VTSAESDYLLRLAALSLSFVGFSSVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALALVPTLLNL
Number of Associated Samples 103
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 91.30 %
% of genes near scaffold ends (potentially truncated) 98.26 %
% of genes from short scaffolds (< 2000 bps) 93.91 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (91.304 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(12.174 % of family members)
Environment Ontology (ENVO) Unclassified
(42.609 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(32.174 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 58.95%    β-sheet: 0.00%    Coil/Unstructured: 41.05%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF05656DUF805 8.70
PF09966DUF2200 4.35
PF08450SGL 3.48
PF12833HTH_18 2.61
PF04392ABC_sub_bind 1.74
PF03473MOSC 1.74
PF01740STAS 1.74
PF02321OEP 1.74
PF05988DUF899 0.87
PF02653BPD_transp_2 0.87
PF03738GSP_synth 0.87
PF13541ChlI 0.87
PF11964SpoIIAA-like 0.87
PF13673Acetyltransf_10 0.87
PF13751DDE_Tnp_1_6 0.87
PF13508Acetyltransf_7 0.87
PF14329DUF4386 0.87
PF01872RibD_C 0.87
PF01625PMSR 0.87
PF12840HTH_20 0.87
PF11809DUF3330 0.87
PF02738MoCoBD_1 0.87
PF01070FMN_dh 0.87
PF03466LysR_substrate 0.87
PF13671AAA_33 0.87
PF06821Ser_hydrolase 0.87
PF09335SNARE_assoc 0.87
PF14338Mrr_N 0.87
PF07045DUF1330 0.87
PF00486Trans_reg_C 0.87
PF13545HTH_Crp_2 0.87
PF03681Obsolete Pfam Family 0.87
PF00107ADH_zinc_N 0.87
PF02423OCD_Mu_crystall 0.87
PF08281Sigma70_r4_2 0.87
PF03795YCII 0.87
PF02608Bmp 0.87
PF03872RseA_N 0.87
PF00989PAS 0.87
PF03401TctC 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG3152Uncharacterized membrane protein YhaH, DUF805 familyFunction unknown [S] 8.70
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 3.48
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 3.48
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 3.48
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 1.74
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.87
COG5470Uncharacterized conserved protein, DUF1330 familyFunction unknown [S] 0.87
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 0.87
COG3545Predicted esterase of the alpha/beta hydrolase foldGeneral function prediction only [R] 0.87
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.87
COG3073RseA, negative regulator of sigma E activitySignal transduction mechanisms [T] 0.87
COG2423Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin familyAmino acid transport and metabolism [E] 0.87
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 0.87
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.87
COG1744Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupNSignal transduction mechanisms [T] 0.87
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 0.87
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 0.87
COG0754Glutathionylspermidine synthase, CHAP domainAmino acid transport and metabolism [E] 0.87
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 0.87
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 0.87
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.87
COG0225Peptide methionine sulfoxide reductase MsrAPosttranslational modification, protein turnover, chaperones [O] 0.87

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.30 %
UnclassifiedrootN/A8.70 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001842|RCM30_1060463All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1096Open in IMG/M
3300003994|Ga0055435_10271074All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae503Open in IMG/M
3300004156|Ga0062589_100496751All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae1027Open in IMG/M
3300004157|Ga0062590_102290452Not Available568Open in IMG/M
3300004463|Ga0063356_105458138Not Available546Open in IMG/M
3300004780|Ga0062378_10210290All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300005093|Ga0062594_100853963All Organisms → cellular organisms → Bacteria → Proteobacteria851Open in IMG/M
3300005206|Ga0068995_10098776All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300005330|Ga0070690_101191772All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300005344|Ga0070661_101192707All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae636Open in IMG/M
3300005356|Ga0070674_102056010All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300005466|Ga0070685_11427081All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae532Open in IMG/M
3300005539|Ga0068853_101621706All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300005577|Ga0068857_100849887All Organisms → cellular organisms → Bacteria → Proteobacteria873Open in IMG/M
3300006224|Ga0079037_102195346All Organisms → cellular organisms → Bacteria → Proteobacteria551Open in IMG/M
3300006358|Ga0068871_102293200All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae515Open in IMG/M
3300006575|Ga0074053_11920778All Organisms → cellular organisms → Bacteria → Proteobacteria847Open in IMG/M
3300006854|Ga0075425_101104890All Organisms → cellular organisms → Bacteria → Proteobacteria903Open in IMG/M
3300006871|Ga0075434_101977495All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae588Open in IMG/M
3300006918|Ga0079216_11077849All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae631Open in IMG/M
3300007004|Ga0079218_11039868All Organisms → cellular organisms → Bacteria → Proteobacteria826Open in IMG/M
3300007004|Ga0079218_12840871All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300007076|Ga0075435_101192500Not Available666Open in IMG/M
3300007324|Ga0099777_1462253All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300009082|Ga0105099_10976701All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae538Open in IMG/M
3300009091|Ga0102851_12915596All Organisms → cellular organisms → Bacteria → Proteobacteria549Open in IMG/M
3300009153|Ga0105094_10367242All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae832Open in IMG/M
3300009156|Ga0111538_12591559All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae636Open in IMG/M
3300009167|Ga0113563_10916339All Organisms → cellular organisms → Bacteria → Proteobacteria1002Open in IMG/M
3300009540|Ga0073899_10208033All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1486Open in IMG/M
3300009553|Ga0105249_12489201All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300009553|Ga0105249_12529587All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae586Open in IMG/M
3300009870|Ga0131092_10191230All Organisms → cellular organisms → Bacteria → Proteobacteria2158Open in IMG/M
3300009870|Ga0131092_10698427All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. KK3865Open in IMG/M
3300009870|Ga0131092_11177632All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae606Open in IMG/M
3300010362|Ga0126377_11519667All Organisms → cellular organisms → Bacteria → Proteobacteria743Open in IMG/M
3300010401|Ga0134121_10048516All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3478Open in IMG/M
3300010401|Ga0134121_10892134All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300011403|Ga0137313_1066456All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300011422|Ga0137425_1163739All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae555Open in IMG/M
3300011437|Ga0137429_1204334All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae617Open in IMG/M
3300012898|Ga0157293_10323366All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae518Open in IMG/M
3300012903|Ga0157289_10314630All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300012904|Ga0157282_10185309All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300012907|Ga0157283_10216416All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300013306|Ga0163162_13414119All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae507Open in IMG/M
3300013307|Ga0157372_10134496All Organisms → cellular organisms → Bacteria → Proteobacteria2846Open in IMG/M
3300013308|Ga0157375_10218786All Organisms → cellular organisms → Bacteria → Proteobacteria2063Open in IMG/M
3300014326|Ga0157380_13108888All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300014865|Ga0180078_1031481All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae841Open in IMG/M
3300014968|Ga0157379_10222636All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1710Open in IMG/M
3300015077|Ga0173483_10722407All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae565Open in IMG/M
3300015200|Ga0173480_10492497Not Available732Open in IMG/M
3300015374|Ga0132255_100398846All Organisms → cellular organisms → Bacteria → Proteobacteria2002Open in IMG/M
3300018481|Ga0190271_11006829All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae958Open in IMG/M
3300021082|Ga0210380_10240253All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales821Open in IMG/M
3300021445|Ga0182009_10487015All Organisms → cellular organisms → Bacteria → Proteobacteria648Open in IMG/M
3300021601|Ga0194061_1193494All Organisms → cellular organisms → Bacteria → Proteobacteria591Open in IMG/M
3300025920|Ga0207649_10329639All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300025920|Ga0207649_11525585All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae529Open in IMG/M
3300025925|Ga0207650_10562426All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300025927|Ga0207687_10619639All Organisms → cellular organisms → Bacteria → Proteobacteria913Open in IMG/M
3300025930|Ga0207701_10300467All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1394Open in IMG/M
3300025931|Ga0207644_11349054All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300025934|Ga0207686_11446324All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300025937|Ga0207669_11246223All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300025938|Ga0207704_10052028All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales2481Open in IMG/M
3300025961|Ga0207712_12050810All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300026088|Ga0207641_10029410All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales4543Open in IMG/M
3300026118|Ga0207675_100673449All Organisms → cellular organisms → Bacteria → Proteobacteria1042Open in IMG/M
3300026121|Ga0207683_11877628All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae548Open in IMG/M
3300027401|Ga0208637_1027277All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales644Open in IMG/M
3300027513|Ga0208685_1138626All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae520Open in IMG/M
3300027722|Ga0209819_10186462Not Available724Open in IMG/M
3300027735|Ga0209261_10189646All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300027871|Ga0209397_10503431All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium602Open in IMG/M
3300027885|Ga0209450_10960036All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas608Open in IMG/M
3300027890|Ga0209496_10205267All Organisms → cellular organisms → Bacteria → Proteobacteria940Open in IMG/M
3300027900|Ga0209253_10469236Not Available944Open in IMG/M
3300027909|Ga0209382_10349240Not Available1657Open in IMG/M
3300028380|Ga0268265_11033763All Organisms → cellular organisms → Bacteria → Proteobacteria813Open in IMG/M
3300028589|Ga0247818_11275906All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae527Open in IMG/M
3300028592|Ga0247822_11858904All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae515Open in IMG/M
3300028809|Ga0247824_10348161All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300028812|Ga0247825_11028023All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales599Open in IMG/M
3300028812|Ga0247825_11453635Not Available503Open in IMG/M
3300031170|Ga0307498_10377529All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales552Open in IMG/M
3300031226|Ga0307497_10296448Not Available740Open in IMG/M
3300031232|Ga0302323_101749487All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300031455|Ga0307505_10532745All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium567Open in IMG/M
3300031538|Ga0310888_11033539All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae517Open in IMG/M
3300031562|Ga0310886_10253938All Organisms → cellular organisms → Bacteria → Proteobacteria985Open in IMG/M
3300031902|Ga0302322_102786708All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae603Open in IMG/M
3300031944|Ga0310884_10540433All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae689Open in IMG/M
3300032000|Ga0310903_10296051All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae794Open in IMG/M
3300032003|Ga0310897_10721204All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae501Open in IMG/M
3300032013|Ga0310906_10651265All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300032157|Ga0315912_10677261All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria822Open in IMG/M
3300033406|Ga0316604_10142805All Organisms → cellular organisms → Bacteria → Proteobacteria1278Open in IMG/M
3300033406|Ga0316604_10419735All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae734Open in IMG/M
3300033413|Ga0316603_10781902All Organisms → cellular organisms → Bacteria → Proteobacteria895Open in IMG/M
3300033413|Ga0316603_12174057All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae524Open in IMG/M
3300033414|Ga0316619_11561783All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae593Open in IMG/M
3300033414|Ga0316619_11741970All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae563Open in IMG/M
3300033416|Ga0316622_101268993All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae861Open in IMG/M
3300033416|Ga0316622_102381822All Organisms → cellular organisms → Bacteria → Proteobacteria611Open in IMG/M
3300033416|Ga0316622_103111585All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae527Open in IMG/M
3300033418|Ga0316625_102600672All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae514Open in IMG/M
3300033419|Ga0316601_100435101Not Available1243Open in IMG/M
3300033482|Ga0316627_102640927All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae531Open in IMG/M
3300033483|Ga0316629_10168729All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum1351Open in IMG/M
3300033521|Ga0316616_100243668All Organisms → cellular organisms → Bacteria → Proteobacteria1844Open in IMG/M
3300033551|Ga0247830_10212613All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax ferrireducens1449Open in IMG/M
3300034148|Ga0364927_0083032All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria874Open in IMG/M
3300034894|Ga0373916_0081990All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae510Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil12.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil10.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.57%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil4.35%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.35%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.61%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands2.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.61%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.61%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge2.61%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland1.74%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.74%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.74%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.74%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.74%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.74%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.74%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.74%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge1.74%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.87%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.87%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton0.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.87%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.87%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.87%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.87%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry0.87%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001842Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM30, ROCA_DNA203_0.2um_MCP-S_C_2bEnvironmentalOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004780Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1FreshEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005206Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007324Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_C4L_LD (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009153Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009540Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-PhEngineeredOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009870Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plantEngineeredOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011403Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2EnvironmentalOpen in IMG/M
3300011422Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2EnvironmentalOpen in IMG/M
3300011437Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2EnvironmentalOpen in IMG/M
3300012898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1EnvironmentalOpen in IMG/M
3300012903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014865Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10DEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300021601Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L224-21mEnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027401Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)EnvironmentalOpen in IMG/M
3300027513Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)EnvironmentalOpen in IMG/M
3300027722Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027735Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027890Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300033406Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CTEnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034148Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17EnvironmentalOpen in IMG/M
3300034894Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.2EngineeredOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
RCM30_106046333300001842Marine PlanktonMLAASNQDMIVPPAESDYLLRLAALSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGL
Ga0055435_1027107413300003994Natural And Restored WetlandsVTSAESDYLLRLAALSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALALIPTLLNLLHIPPTVTWPLS
Ga0062589_10049675123300004156SoilVTAADSDYLIRLASLSLSFVGFSSVVVTLRGALGGELSERHVRLVRLYIEGG
Ga0062590_10229045223300004157SoilVTPAESEYLLCLAALSLSFVGFSAIVVTLRGALGGELSPRHIRLVCLYIEGGLLVTVLSLAP
Ga0063356_10545813813300004463Arabidopsis Thaliana RhizosphereVTPGESDYLLRLATLSLSFVGFSAVVVTLRGALGGELSERHLRLVRLYIEGGFVVTALALVPAL
Ga0062378_1021029013300004780Wetland SedimentVTSVESDYLLRLASLSLSFVGFSAVVVTLRGALGGELGDRHIRLVRLYIEGGFLVT
Ga0062594_10085396333300005093SoilVTPAESDYLLRLAALSLSFVGFSAVVVTLRGALGGKLSERHLRLVRLYIEGGLLVTALALVPTL
Ga0068995_1009877623300005206Natural And Restored WetlandsVTSAESDYLLRLASLSLSLVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALALVP
Ga0070690_10119177213300005330Switchgrass RhizosphereVTPAESDYLSQLASLSLSFVGFSAVVVTLRGALGGKLSDRHLRLVRLYIEGGLLITLLALVPALLNLLHVPDAVTWPLSSAA
Ga0070661_10119270713300005344Corn RhizosphereVTTRLRRQPILNEHAFVTSTESDYLFHLSGLSLSFVGFSAIVVTLRGALEGKLSDRHLRLVRLYIEGGFLITALALVPSLLNL
Ga0070674_10205601023300005356Miscanthus RhizosphereVTSVESDYLIRLASLSLSFVGFSSVVVTLRGALGGQLSERHVRLVRLYIEGGFLVT
Ga0070685_1142708123300005466Switchgrass RhizosphereVTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVRLVRLYIEGGFLVTALALAPTMLDLLGVTPAVTWPLSSAI
Ga0068853_10162170623300005539Corn RhizosphereVTSAESDYLFQLAGLSLSFVGFSAVVVTLRGALGGKLTDRHLRLVRLYIEGGLLVTALALVPTLLDLLHIP
Ga0068857_10084988713300005577Corn RhizosphereVTSNESDYLLRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALAL
Ga0079037_10219534623300006224Freshwater WetlandsVTSAESAYLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVT
Ga0068871_10229320013300006358Miscanthus RhizosphereVTSIESDYLLRLAGLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTL
Ga0074053_1192077813300006575SoilVTPAESDFLLRLASLSLSFVGFSAVVVSLRGALGGELSDQHLRLVRLYIEGGLLVTALGLVPTLLNLLHISESVTW
Ga0075425_10110489023300006854Populus RhizosphereVTAAESDYLLRLATLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALALLPTLLNLL
Ga0075434_10197749513300006871Populus RhizosphereVRGSAFCQADTAFRDGTIVTSAESGYLSSLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRFYIEGGLLLVALALVPRLLELLHFTDIVAWRV
Ga0079216_1107784913300006918Agricultural SoilVTSPEYDYLLRLATLSLSFVGFSAVVVTLRGALGGELSERHLRLVRLYIEGGFIVTAL
Ga0079218_1103986813300007004Agricultural SoilVTSAESDYLFRLATLSLSFVGFSAVVVTLRGALGGDLSDRHLRLVRLYIEGGLLVTALAL
Ga0079218_1284087113300007004Agricultural SoilMFHEGTIVTPGESDYLLRLATLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEG
Ga0075435_10119250013300007076Populus RhizosphereVTPTESDYLLRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGMLVTALALVP
Ga0099777_146225323300007324Activated SludgeMAPAESGYILHLSSLSLTFVGFSALVVTLRSTLGGDLSDRHLRLVRLYIEGGLLLTALALVPT
Ga0105099_1097670113300009082Freshwater SedimentVTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTAL
Ga0102851_1291559613300009091Freshwater WetlandsVTSAESAYLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFL
Ga0105094_1036724223300009153Freshwater SedimentVTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEG*
Ga0111538_1259155923300009156Populus RhizosphereVTSGESDYLLRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLVVTALALVPALLHLLQVPDAITWPLSS
Ga0113563_1091633913300009167Freshwater WetlandsVTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTALALMPA
Ga0073899_1020803323300009540Activated SludgeVTPAESDYLFRLAALSLSFVGFSAIVVSLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNVLQVPGTVIWPLS*
Ga0105249_1248920113300009553Switchgrass RhizosphereVTSADSDYLIRPAALSLSCVGFSRVVVTLRGALGGALSERHVRLVRLYIEGGFLVTALAL
Ga0105249_1252958713300009553Switchgrass RhizosphereVTSAESDYLVQLASLSLSFVGFSAVVVTLRGALGGKLSDRHLRLVRLYIEGGLLVTALALVPTLLNLLHIPDTVTWPLS
Ga0131092_1019123013300009870Activated SludgeLTPAESDYLFRLASLSLSFVGFSAVVVTLRGALKGEIADRHLRLVRLYIEGGLLVTTLALVPTLLNLLHVP
Ga0131092_1069842713300009870Activated SludgeVTPAESDYLLRLAALSLSFVGFSAVVVTLRGALRGELADRHLRLVRLYIEGGFLVTTLALVPTLLN
Ga0131092_1117763213300009870Activated SludgeVTPPESDYLFRLASLSLSFVGFSAVVVTLRGALKGEIADRHLRLVRLYIEGGLLVTTLALVPTLLNLLHVPDAVTW
Ga0126377_1151966723300010362Tropical Forest SoilVTSAESDYLLRLAALSLSFVGFSSVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALALVPTLLNL
Ga0134121_1004851613300010401Terrestrial SoilLIDPSRQEPAAVTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVRLVRLYIEGGFLVTALALAPTMLDLLGVTPAVTW
Ga0134121_1089213413300010401Terrestrial SoilMSGHTYEHAIVTPAESDYLSQLASLSLSFVGFSAVVVTLRGALGGKLSDRHLRLVRLYIEGGL
Ga0137313_106645613300011403SoilMTSGESDYLLRLAALSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLV
Ga0137425_116373923300011422SoilVTPAESDFLLRLAALSLSFVGFSAIVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALGLVPTLLNLLHVP
Ga0137429_120433423300011437SoilMTPAESDFLLRLAALSLSFVGFSAVVVTLRGALGGELSVRHLRLVRLYIEGGLLVTVLGLVPTLLDLLHVPESVMWRVA
Ga0157293_1032336623300012898SoilSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLDLLHIPDIVTWPLSSAAAASILPSYS*
Ga0157289_1031463013300012903SoilLVDPSRQEPAAVTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVR
Ga0157282_1018530913300012904SoilVTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVRLVRLYIEGGFLVTALALVPTMLDLLGVTPAVTWPL
Ga0157283_1021641623300012907SoilLVDPSRQEPAAVTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVRLVRLYIEGGFLVTAL
Ga0163162_1341411913300013306Switchgrass RhizosphereMTSAESDYLMRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLV
Ga0157372_1013449613300013307Corn RhizosphereVTSTESDYLFHLSGLSLSFVGFSAIVVTLRGALEGKLSDRHLRLVRLYIEGGFLITALALVPSL
Ga0157375_1021878613300013308Miscanthus RhizosphereLVDPSRQEPAAVTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVRLVRLYIEGGFLVTALALV
Ga0157380_1310888823300014326Switchgrass RhizosphereLADPSRQEPAAVTSVESDYLIRLASLSLSFVGFSSVVVTLRGALGGQLSERHVRLVRLYIEGGFLV
Ga0180078_103148113300014865SoilVTSAESDYLLRLASLSLSFVGFSAVVVTLRGALGGELANRHLRLVRLYIEGGFLVTALALVPTLLNLLHIPDTVTWPL
Ga0157379_1022263633300014968Switchgrass RhizosphereVTSAESDYLFQLAGLSLSFVGFSAVVVTLRGALGGKLTDRHLRLVRLYIEGGLLVTALALVPTLLDL
Ga0173483_1072240723300015077SoilVTSPESDYLFRLATLSLSFVGFSAVVVTLRGALKGELADRHLRLVRLYIEGGLLVTALAVLPTLL
Ga0173480_1049249713300015200SoilVTSAESDYLSQLASLSLSFVGFSAVVVTLRGALGGKLSDRHLRLVRMYIEGGLLVTALALVPSLLNFL
Ga0132255_10039884643300015374Arabidopsis RhizosphereVTPAESDFLLRLAALALSFVGFSAIVVTLRGALGGKLAERHLRFVRLYIEGGLVVTALGLVPTLLNLLHVPEPVI
Ga0190271_1100682923300018481SoilVTPAESDYLLRLAALSLSFVGFSAIVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNLLRIPHTVT
Ga0210380_1024025313300021082Groundwater SedimentVTSPESDYLFRLATLSLSFVGFSAVVVTLRGALKGELADRHLRLVRLYIEGGLLVTALAVLPTLLNLLHIR
Ga0182009_1048701523300021445SoilVTPAESDYLARLASLALSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPSLLSL
Ga0194061_119349413300021601Anoxic Zone FreshwaterVEPAESDYLFRLATLSLSFVGFSSVVVALRGALGGELSDRHLRLVRLYIEGGLLVTALAVFPTLLN
Ga0207649_1032963933300025920Corn RhizosphereVTAAESDYLLRLASLSLSFVGFSAIVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALIPTLLNLLHVAPPVTWPVSSAAA
Ga0207649_1152558523300025920Corn RhizosphereVTSTESDYLFHLSGLSLSFVGFSAIVVTLRGALEGKLSDRHLRLVRLYIEGGFLITALALVPSLLNL
Ga0207650_1056242613300025925Switchgrass RhizosphereMTSGESDYLLRLAGLSLSFVGFSVVVVTLRGALGGELSDRHLRLVRLYIEGGLLTTALA
Ga0207687_1061963913300025927Miscanthus RhizosphereVTPAESDYLGRLATLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPSLLELLHVTETALWRSA
Ga0207701_1030046713300025930Corn, Switchgrass And Miscanthus RhizosphereVTSAESDYLLRLASLSLSFVGFSAVVVTLRGALGGELSNRHLRLVRLYIEGGLLVTALA
Ga0207644_1134905423300025931Switchgrass RhizosphereVTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVRLVRLYIEGGFLVTALALVPTMLDLLGVAPAVTW
Ga0207686_1144632413300025934Miscanthus RhizosphereMSGHTYEHAIVTPAESDYLSQLASLSLSFVGFSAVVVTLRGALGGKLSDRHLRLVRLYIEGGLLVTALALAPKLLNLLN
Ga0207669_1124622323300025937Miscanthus RhizosphereVTSVESDYLIRLASLSLSFVGFSSVVVTLRGALGGQLSERHVRLVRLYIEGGFLVTALALAPTMLDLLGVTPAVTWP
Ga0207704_1005202813300025938Miscanthus RhizosphereVTSAESDYLFQLAGLSLSFVGFSAVVVTLRGALGGKLTDRHLRLVRLYIEGALLVTA
Ga0207712_1205081023300025961Switchgrass RhizosphereVTSAEPDYLIRLASLSLSFVGFSSVVVTLRGALGGQLSERHVRLVRLYIEGG
Ga0207641_1002941013300026088Switchgrass RhizosphereVTSAESDYLFQLAGLSLSFVGFSAVVVTLRGALGGKLTDRHLRLVRLYIEGGLLVTALALVPTLLDLLHIPDIVTWPLSSAA
Ga0207675_10067344933300026118Switchgrass RhizosphereVTSTESDYLFRLAALSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLFNLV
Ga0207683_1187762813300026121Miscanthus RhizosphereVTSAESDYLFQLAGLSLSFVGFSAVVVTLRGALGGKLTDRHLRLVRLYIEGGLLVTALALVPTLLNLLH
Ga0208637_102727713300027401SoilVTPAESDFLLRLASLSLSFVGFSTVVVSLRGALGGELSDQHLRLVRLYIEGGLLVTALGLVPTLLNLLHISESVTWPVSS
Ga0208685_113862613300027513SoilVTSAESDYLLRLASLSLSFVGFSAVVVTLRSALGGELANRHLRLVRLYIEGGFLVTALALVPTLLNLLHVPDTIT
Ga0209819_1018646213300027722Freshwater SedimentMDTTAIDYLLRLAALSISFVGFATIVVTLRRGLGGELSPFHLLLVRVYIEIGLIVAVGAIIPTLLNLFTLPN
Ga0209261_1018964623300027735Wetland SedimentVTSVESDYLLRLASLSLSFVGFSAVVVTLRGALGGELGDRHIRLVRLYIEGGFLVTTL
Ga0209397_1050343113300027871WetlandVTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLV
Ga0209450_1096003623300027885Freshwater Lake SedimentVTSADSDYLLRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNL
Ga0209496_1020526723300027890WetlandVTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTALALMPAVLDLLRLSESLT
Ga0209253_1046923613300027900Freshwater Lake SedimentVTSAESDFLLSLAALSLSFVGFSAVVVTLRGALGGEISDRHLRLVRLYIEGGLIV
Ga0209382_1034924013300027909Populus RhizosphereLPDEKGSPMVTPGESDYLLRLATLSLSFVGFSSVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALALIPTLLNLLHVRETVVWPLSS
Ga0268265_1103376313300028380Switchgrass RhizosphereVTSAESDYLFQLAGLSLSFVGFSAVVVTLRGALGGKLTDRHLRLVRLYIEGGLLVTALA
Ga0247818_1127590613300028589SoilMTSAESDYLLRLAGLSFSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTTLAIVPTLLNLLHVPDTITWPLSS
Ga0247822_1185890413300028592SoilMVPEYDYLLRLATLSLSFVGFSAVVVTLRGGLGGKLSARHLRLVRLYIEGGFIVTALALVPTLLNVLR
Ga0247824_1034816123300028809SoilVTSPESDYLLRIATLSLSFVGFSAVVVTLRGALGGELSERHLRLVRLYIEGGFIVTALALLPT
Ga0247825_1102802313300028812SoilVTSAESDYLFRLASLSLSFVGFSAVVVTLRGALGGKLSDRHLRLVRLYIEGGLLVTALAL
Ga0247825_1145363513300028812SoilVTSAESDYLLRLASLSLSFVGFSAVVVTLRGALGGQLANRHLRLVRLYIEGGFLVTALAIVPAL
Ga0307498_1037752913300031170SoilVTPAESDFLLRLASLSLSFVGFSAVVVSLRGALGGELSDQHLRLVRLYIEGGLLVTALGLVPTLLNLLHIPESV
Ga0307497_1029644823300031226SoilVTSAESDYLFRLATLSLSFVGFSAVIVTLRGALGGELSDRHVRLVRLYIEGGLLVTALALFP
Ga0302323_10174948723300031232FenVTSAESDYLFRVATLSLSFVGFSSVVVALRGALGGDLSDRHLRLVRLYIEGGLLVTALALVPTLLDILHVRDTVT
Ga0307505_1053274513300031455SoilVTSAESDYLFRLATLSLSFVGFSAVVVTLRGALGGELSARHLRLVRLYIEGGFLV
Ga0310888_1103353913300031538SoilMTSAESDYLMRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNLL
Ga0310886_1025393833300031562SoilVTSAESDYLLRLASLSLSFVGFSAVVVTLRGALGGELANRHLRLVRLYIEGGFLVTTLAIVPTLLNLLHVPDTITWPLSSAI
Ga0302322_10278670813300031902FenVTTAESDYLFHLATLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPT
Ga0310884_1054043313300031944SoilMTSAESDYLMRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNLLHIPDAVTWP
Ga0310903_1029605113300032000SoilMRPNNSFTPREHAIMTSAESDYLMRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPT
Ga0310897_1072120413300032003SoilVTSAESDYLLRLASLSLSFVGFSAVVVSLRGALGGELANRHLRLVRLYIEGGFLVTTLAIVPTL
Ga0310906_1065126513300032013SoilVTSTESDYLFRLAALSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLFNLVHVPGTVIWPLSSAA
Ga0315912_1067726123300032157SoilVTPAESDYLLRLATLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNLLHVPGTV
Ga0316604_1014280513300033406SoilVTSAESAYLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTALALMPA
Ga0316604_1041973523300033406SoilVTPAESDYLLRLAALSLSLVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVP
Ga0316603_1078190223300033413SoilVTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTALALMPAVLD
Ga0316603_1217405713300033413SoilVTSAESDFLLCLAALALSFTGFSAVVVTLRSALGGEISDRHLRLVRLYIEGGLIVTALALIPTLLNVLHVSAFVIWTVSS
Ga0316619_1156178323300033414SoilMTSAESDYLLHLAALSLSLVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVP
Ga0316619_1174197023300033414SoilVTSAESDYLFRLAALSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLDLLHVPDTVIWR
Ga0316622_10126899323300033416SoilVTPAESDYLLRLAALSLSLVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNLLHAPGTVTWPA
Ga0316622_10238182213300033416SoilVTSAESAYLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTALTLMPAVLDLLRLSESL
Ga0316622_10311158513300033416SoilVTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVT
Ga0316625_10260067213300033418SoilMTPAESDYLLRLAGLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALAL
Ga0316601_10043510113300033419SoilVTPAESDYLLRLAALSLSLVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGRLVTALALVPTLLNLLHAPGTV
Ga0316627_10264092723300033482SoilVTSAESAYLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTALALMPAVLDLLRLSESLTWRLSSAA
Ga0316629_1016872923300033483SoilMTSAESDYLLHLAALSLSLVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLDLLQIPGAVTWPLSSGA
Ga0316616_10024366833300033521SoilVTSAESDFLLCLAALSLSFTGFSAVVVTLRSALGGEISDRHLRLVRLYIEGGLIVTALALIPTLLNVLHVSA
Ga0247830_1021261333300033551SoilMTSAESDYLLRLAGLSFSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFL
Ga0364927_0083032_3_1913300034148SedimentMPRGREVTPAESDFLLRLAALSLSFVGFSAIVVTLRGALGGELSDRHLRLVRLYIEGGLLVTA
Ga0373916_0081990_289_5103300034894Sediment SlurryMTSAESDYLLRLASLSLSFVGFSAVVVTLRGALGGELANRHLRLVRLYIEGGFLVTTLALVPTLLNLLHVPDTI

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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