Sample 3300003589

Overview

Basic Information
IMG/M Taxon OID	3300003589 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0046785 \| Gp0091321 \| Ga0008662
Sample Name	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_120m_DNA
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	210273364
Sequencing Scaffolds	26
Novel Protein Genes	28
Associated Families	27

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1
All Organisms → Viruses → Predicted Viral	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2
Not Available	9
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → environmental samples → uncultured marine thaumarchaeote AD1000_06_F06	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae → Acaryochloris → unclassified Acaryochloris → Acaryochloris sp. CCMEE 5410	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1
unclassified Hyphomonas → Hyphomonas sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine → Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → coastal inlet → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Saanich Inlet, British Columbia, Canada
Coordinates	Lat. (^o)	48.6	Long. (^o)	-123.5	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F002665	Metagenome	539	N
F004164	Metagenome / Metatranscriptome	450	Y
F004772	Metagenome / Metatranscriptome	424	N
F007318	Metagenome / Metatranscriptome	353	Y
F015154	Metagenome / Metatranscriptome	257	Y
F015265	Metagenome / Metatranscriptome	256	Y
F016399	Metagenome / Metatranscriptome	247	Y
F017732	Metagenome / Metatranscriptome	239	N
F032337	Metagenome	180	Y
F033593	Metagenome / Metatranscriptome	177	N
F040324	Metagenome	162	N
F043676	Metagenome / Metatranscriptome	156	Y
F046643	Metagenome	151	N
F046847	Metagenome / Metatranscriptome	150	N
F052383	Metagenome / Metatranscriptome	142	Y
F058538	Metagenome / Metatranscriptome	135	N
F061863	Metagenome / Metatranscriptome	131	Y
F066454	Metagenome / Metatranscriptome	126	N
F071270	Metagenome / Metatranscriptome	122	Y
F073088	Metagenome	120	N
F091752	Metagenome / Metatranscriptome	107	N
F094386	Metagenome / Metatranscriptome	106	N
F094606	Metagenome	106	Y
F096496	Metagenome	104	N
F098669	Metagenome / Metatranscriptome	103	N
F100536	Metagenome	102	Y
F105496	Metagenome / Metatranscriptome	100	N

Family

Category

Number of Sequences

3D Structure?

F002665

Metagenome

539

F004164

Metagenome / Metatranscriptome

450

F004772

Metagenome / Metatranscriptome

424

F007318

Metagenome / Metatranscriptome

353

F015154

Metagenome / Metatranscriptome

257

F015265

Metagenome / Metatranscriptome

256

F016399

Metagenome / Metatranscriptome

247

F017732

Metagenome / Metatranscriptome

239

F032337

Metagenome

180

F033593

Metagenome / Metatranscriptome

177

F040324

Metagenome

162

F043676

Metagenome / Metatranscriptome

156

F046643

Metagenome

151

F046847

Metagenome / Metatranscriptome

150

F052383

Metagenome / Metatranscriptome

142

F058538

Metagenome / Metatranscriptome

135

F061863

Metagenome / Metatranscriptome

131

F066454

Metagenome / Metatranscriptome

126

F071270

Metagenome / Metatranscriptome

122

F073088

Metagenome

120

F091752

Metagenome / Metatranscriptome

107

F094386

Metagenome / Metatranscriptome

106

F094606

Metagenome

106

F096496

Metagenome

104

F098669

Metagenome / Metatranscriptome

103

F100536

Metagenome

102

F105496

Metagenome / Metatranscriptome

100

Scaffold	Taxonomy	Length	IMG/M Link
JGI26248J51725_1001261	All Organisms → cellular organisms → Bacteria → Proteobacteria	8959	Open in IMG/M
JGI26248J51725_1003448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4755	Open in IMG/M
JGI26248J51725_1008615	All Organisms → Viruses → Predicted Viral	2529	Open in IMG/M
JGI26248J51725_1009128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	2433	Open in IMG/M
JGI26248J51725_1010988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2141	Open in IMG/M
JGI26248J51725_1014950	All Organisms → Viruses → Predicted Viral	1721	Open in IMG/M
JGI26248J51725_1017740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1523	Open in IMG/M
JGI26248J51725_1033104	Not Available	980	Open in IMG/M
JGI26248J51725_1034921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	944	Open in IMG/M
JGI26248J51725_1035927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	926	Open in IMG/M
JGI26248J51725_1036017	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	924	Open in IMG/M
JGI26248J51725_1041249	All Organisms → cellular organisms → Archaea	843	Open in IMG/M
JGI26248J51725_1046065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	785	Open in IMG/M
JGI26248J51725_1050834	Not Available	736	Open in IMG/M
JGI26248J51725_1051024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
JGI26248J51725_1053093	Not Available	716	Open in IMG/M
JGI26248J51725_1054579	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → environmental samples → uncultured marine thaumarchaeote AD1000_06_F06	704	Open in IMG/M
JGI26248J51725_1063452	Not Available	639	Open in IMG/M
JGI26248J51725_1068027	Not Available	612	Open in IMG/M
JGI26248J51725_1068206	Not Available	611	Open in IMG/M
JGI26248J51725_1068853	Not Available	607	Open in IMG/M
JGI26248J51725_1071924	Not Available	591	Open in IMG/M
JGI26248J51725_1078160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae → Acaryochloris → unclassified Acaryochloris → Acaryochloris sp. CCMEE 5410	563	Open in IMG/M
JGI26248J51725_1079637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	556	Open in IMG/M
JGI26248J51725_1080649	unclassified Hyphomonas → Hyphomonas sp.	552	Open in IMG/M
JGI26248J51725_1080936	Not Available	551	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

JGI26248J51725_1001261

All Organisms → cellular organisms → Bacteria → Proteobacteria

8959

Open in IMG/M

JGI26248J51725_1003448

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria

4755

Open in IMG/M

JGI26248J51725_1008615

All Organisms → Viruses → Predicted Viral

2529

Open in IMG/M

JGI26248J51725_1009128

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium

2433

Open in IMG/M

JGI26248J51725_1010988

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria

2141

Open in IMG/M

JGI26248J51725_1014950

All Organisms → Viruses → Predicted Viral

1721

Open in IMG/M

JGI26248J51725_1017740

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter

1523

Open in IMG/M

JGI26248J51725_1033104

Not Available

980

Open in IMG/M

JGI26248J51725_1034921

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae

944

Open in IMG/M

JGI26248J51725_1035927

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter

926

Open in IMG/M

JGI26248J51725_1036017

All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae

924

Open in IMG/M

JGI26248J51725_1041249

All Organisms → cellular organisms → Archaea

843

Open in IMG/M

JGI26248J51725_1046065

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria

785

Open in IMG/M

JGI26248J51725_1050834

Not Available

736

Open in IMG/M

JGI26248J51725_1051024

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria

734

Open in IMG/M

JGI26248J51725_1053093

Not Available

716

Open in IMG/M

JGI26248J51725_1054579

All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → environmental samples → uncultured marine thaumarchaeote AD1000_06_F06

704

Open in IMG/M

JGI26248J51725_1063452

Not Available

639

Open in IMG/M

JGI26248J51725_1068027

Not Available

612

Open in IMG/M

JGI26248J51725_1068206

Not Available

611

Open in IMG/M

JGI26248J51725_1068853

Not Available

607

Open in IMG/M

JGI26248J51725_1071924

Not Available

591

Open in IMG/M

JGI26248J51725_1078160

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae → Acaryochloris → unclassified Acaryochloris → Acaryochloris sp. CCMEE 5410

563

Open in IMG/M

JGI26248J51725_1079637

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas

556

Open in IMG/M

JGI26248J51725_1080649

unclassified Hyphomonas → Hyphomonas sp.

552

Open in IMG/M

JGI26248J51725_1080936

Not Available

551

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
JGI26248J51725_1000693	JGI26248J51725_100069314	F017732	AHSKLNIDMHQFILNVIFLFLLTGCASKGYSIDEIFEDGAEIDSTPEDSIKYTCNQNKYFYIQYIGDEKKSLWIIFPKNEIKLYQTEISNVFSNGITKLIFNEQTTTVKKDGSIFYSECLKQT*
JGI26248J51725_1001261	JGI26248J51725_10012617	F098669	METATRGRKQKWRLKXAEGLGRKWRIEETERRELHESDQGLDPGHGLNPGRKVRRIDQAMEGSPEIVPAKIRKKPCLGRVFFVLNFIPENLNYSN*
JGI26248J51725_1003448	JGI26248J51725_10034484	F004164	MAYLHTLRLIFFLLLPIYGQAEEDLKYSYEHDSIGDKYDAEGDITFRNHKDNGVVFEYAHVNINWKGGFFKSSITDDFIQKKPIQNGLVLYDITEGNQIKGYSVFARHIQIKNYPVGFETKKITVDEGRHPDFSDYDWIFKFKVASMENLKMNDQSHQAIYTKLWGSRPTSTTNCKSTQPGMNFSNSTGEIYVESWFDLKDNKLLKQVFTKXGCVPSKRLISKETWILIN*
JGI26248J51725_1008615	JGI26248J51725_10086152	F066454	MSIRLDVLILINSGVTDRSEIMERLGINIMSVSNCFRFLIKEGWVEYSREPVSAVGSVGYRITQVGIDKIKAXTVDDYRKSPQRKIPAYEVMRSHLGVGGDVTRSELVNLWNELTDYYLPYEGDKEFTEIVVFPP*
JGI26248J51725_1009128	JGI26248J51725_10091283	F058538	MYSQYETTVINRRRLHDLLTXVNRKYHLEYEVVQENRDVFYVIFHDLNIKQTIAIQKQIKGSSQPEHFDMH*
JGI26248J51725_1010509	JGI26248J51725_10105091	F094606	PIEAKKVARSIQRKPFTIPDSRDQSVLLISFENIIDNPKIPTIAPNNMGSLMGFLKKIKPLKTVNKVRVEKIRQTKPDAK*
JGI26248J51725_1010988	JGI26248J51725_10109881	F046643	TDSKGNQIELWEPEDIFLARSPNYLKSVKYFLSILYYCCVYLVVAYIVLSVSVHFFDSISDDGLIETFKQILEGCGVGCRPMR*
JGI26248J51725_1014950	JGI26248J51725_10149501	F046847	MADEQTEQVETPKTENEVVISQSKLDKLIDKGFSKGANRAKTELADILGVDSIEQARELINAKRETDEANKSDLDKAAELIQTLNSTIDGLESNNKMMVADMAVQKVVTENGIKDADYFKHLLAQASATDDFDQSTFIEQLKGDKP
JGI26248J51725_1017740	JGI26248J51725_10177403	F007318	MKINIIIPKNSAPIIIKRQDMLMKSKIRKKTEWTVFLETVTMIAEITAINENV*
JGI26248J51725_1033104	JGI26248J51725_10331042	F015154	AAIAKNYTVTVSSTASSGSTVTGQSSYYLMASSGAETELAARVVGRAQYPDEGNNDAYPIVEVWLNTHRDRYVTATASTA*
JGI26248J51725_1034921	JGI26248J51725_10349212	F040324	MQXEIEKDNSLKKRVDEQIQTRKKIISDFLKDLSLKEKQVTTSKKTGINENTITRMKNNRNFVTSFDNAIALYSVYPDLNKMFLNQWIELSGLQNISEYEVQINGSITKNFDILPLLPNETSSLKIPQNIYINFKPMIVYRYQSITSLLNRQLFIFSQRGLDNNSCENFFKFLSDKICLGIAEDNKQYVGYLTKEEKGYYVINPITKKIYTNSFKINEVYRLILTINDDWSMTSD*
JGI26248J51725_1035927	JGI26248J51725_10359273	F105496	STNLFDLGQLQINPIILGGVGWEVKNSKVLESEIPQILQGWIIDLSD*
JGI26248J51725_1036017	JGI26248J51725_10360171	F015265	PDHMTKNPKLIERNAIVSLNNVGLPVFLNPIYDMTPIASPTKNPTKFSMFSNKNSNGV*
JGI26248J51725_1041249	JGI26248J51725_10412491	F096496	VNKKLVPTNIERNAILTKQQKIHLKSEKVDPKILNNIRRTLEKKLDGLTEDLDIIKNSKSLENWRLLQSEKFQELHKVLESTVMNFKPFYPFAVKTFSKKVGTKKFRMFWMDISEESNFSTERIFEPSFALRKIKHYFNDDSFELLCWAVENNLIPCYKNNAKREEDFELAKNDELYFLKLQNTRTFTN
JGI26248J51725_1046065	JGI26248J51725_10460652	F094386	MDYTEYYELFKQYPECEVEHENHKEGFDGKRNFDLEKAIIKLVAEDETLFLYQERTFNFSMLLLNKQYADLDFWVCTTHALHDISEHKQGLLDDGDYRLYFEGAEGPIEEEEQGY
JGI26248J51725_1050834	JGI26248J51725_10508341	F091752	LYRMSQMLQIETEFLPENIQWLGLGNKYLECQYEITDNWGTKGLDKKDSYDTNFQNEYDFVLDNMKLQG*
JGI26248J51725_1051024	JGI26248J51725_10510241	F105496	NSFLSLLCSTNLFDLGQLQINPIILGGVGWEVKNSKVLESEIPQILQGWIIDLSD*
JGI26248J51725_1053093	JGI26248J51725_10530931	F033593	FTSSHYAARQVDVNLTPETTLQLEQRNRNSFYDLRPVIIQDNLIYESATSADQIELENEVGNLVVNFRNEGYTVRDVEVRNGFAYGGPRVKNLSDRAFTTFSANNAITLEGGAGDGEILLENESGVLQHPQSDSWSTTIADWNTLRFTGTLNSNVDGETMRLSDINGTKSSQNHRINFAFPTEVTKSA*
JGI26248J51725_1054579	JGI26248J51725_10545792	F073088	MNLIQIQFDQFVFLNNTYYLKSEFQSTLKNVIENELNIFIDFKVMLTSIGVKTIKFRKKDKIHKI*
JGI26248J51725_1063452	JGI26248J51725_10634522	F052383	TPKRSADVTIIKGTDIILIKLTTAVKEMDNATSPLANLVNTFDVTPPGAAAIIIKPTAIGADKFSIKATPKATIGKIINCKKNPTKKLFGYLSTLVKSLTESPRPSPSIISAKQRGAILVTISMIYFYETVKL*
JGI26248J51725_1068027	JGI26248J51725_10680272	F016399	LKTGIIGDVVKGIGAGSLVSLVMSRVAPNSSITPIASTGAAFLTGGIVGGAANLILSGGLGQLGGIFGGATTPQQEFGV*
JGI26248J51725_1068206	JGI26248J51725_10682061	F071270	VPDAYTLAKQHLEAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN*
JGI26248J51725_1068853	JGI26248J51725_10688532	F004772	MGTNIKVAQNVSSDGAIITGFRYVDSNLTVGANGGGPVPQTTRVMAIHTYSTIAGEVVITGANQITNKTAKGTAIRYRVGALDSNDMYIGDMGVGVYGVLSVATSGTAAMAPTITLYVG*YAFLF
JGI26248J51725_1071924	JGI26248J51725_10719241	F061863	IMQINTNLLIQTFIAACLVIFGVVTKNSFEQLGFPNHPIGKPIGMGMFIMGWIYTAYILSINKPNKLMFILPSALIVMSVMMMKQYMVKKQNPPMVFPAIFALSWIILGLGAGNHLVGNQKYLGLFASFLVLLSMMVILPFQRKNKIIDGPGQPLFVIAWGILIMLNSNR*
JGI26248J51725_1078160	JGI26248J51725_10781601	F100536	IRPSRKHILIAIGFLSVALAALYPIRGMFPPFYYEQYNTVKDRLETIEGLQIRDSWQHKDIRLEDCGFDVAIDDRNASLTFVDHQDWVALFLKIDGIRISMDGQQRLVTCEQMKSAGLEIDGLSDVLENLGSVIEFCSDQANPILVPDAEYDYWDHLNYAQINFFIEKNNPK*
JGI26248J51725_1079637	JGI26248J51725_10796372	F043676	MNNKQFDALEAGTKVLIKAWDHNVSDQVETVATYNGWCDHPDWGTAVNVSYENVDCHQDSLFSNERETETDIPVSQFQKNVLEVMEV
JGI26248J51725_1080649	JGI26248J51725_10806492	F002665	QGVPEDKVSEIFRYIASVRDNMKYDPKAVLRKIADDVEMEDIKYDTTFWDNYIDEILSKIQKPEPRFADGGLV*
JGI26248J51725_1080936	JGI26248J51725_10809362	F032337	MPKEKIDYVEQDIYDYFGADQDIWKAERHELLGIIGGMSGILELIWHNQVSAERSFKDFKDWLKETKELDMIEVVDN

Scaffold ID

Protein ID

Family

Sequence

JGI26248J51725_1000693

JGI26248J51725_100069314

F017732

AHSKLNIDMHQFILNVIFLFLLTGCASKGYSIDEIFEDGAEIDSTPEDSIKYTCNQNKYFYIQYIGDEKKSLWIIFPKNEIKLYQTEISNVFSNGITKLIFNEQTTTVKKDGSIFYSECLKQT*

JGI26248J51725_1001261

JGI26248J51725_10012617

F098669

METATRGRKQKWRLKXAEGLGRKWRIEETERRELHESDQGLDPGHGLNPGRKVRRIDQAMEGSPEIVPAKIRKKPCLGRVFFVLNFIPENLNYSN*

JGI26248J51725_1003448

JGI26248J51725_10034484

F004164

MAYLHTLRLIFFLLLPIYGQAEEDLKYSYEHDSIGDKYDAEGDITFRNHKDNGVVFEYAHVNINWKGGFFKSSITDDFIQKKPIQNGLVLYDITEGNQIKGYSVFARHIQIKNYPVGFETKKITVDEGRHPDFSDYDWIFKFKVASMENLKMNDQSHQAIYTKLWGSRPTSTTNCKSTQPGMNFSNSTGEIYVESWFDLKDNKLLKQVFTKXGCVPSKRLISKETWILIN*

JGI26248J51725_1008615

JGI26248J51725_10086152

F066454

MSIRLDVLILINSGVTDRSEIMERLGINIMSVSNCFRFLIKEGWVEYSREPVSAVGSVGYRITQVGIDKIKAXTVDDYRKSPQRKIPAYEVMRSHLGVGGDVTRSELVNLWNELTDYYLPYEGDKEFTEIVVFPP*

JGI26248J51725_1009128

JGI26248J51725_10091283

F058538

MYSQYETTVINRRRLHDLLTXVNRKYHLEYEVVQENRDVFYVIFHDLNIKQTIAIQKQIKGSSQPEHFDMH*

JGI26248J51725_1010509

JGI26248J51725_10105091

F094606

PIEAKKVARSIQRKPFTIPDSRDQSVLLISFENIIDNPKIPTIAPNNMGSLMGFLKKIKPLKTVNKVRVEKIRQTKPDAK*

JGI26248J51725_1010988

JGI26248J51725_10109881

F046643

TDSKGNQIELWEPEDIFLARSPNYLKSVKYFLSILYYCCVYLVVAYIVLSVSVHFFDSISDDGLIETFKQILEGCGVGCRPMR*

JGI26248J51725_1014950

JGI26248J51725_10149501

F046847

MADEQTEQVETPKTENEVVISQSKLDKLIDKGFSKGANRAKTELADILGVDSIEQARELINAKRETDEANKSDLDKAAELIQTLNSTIDGLESNNKMMVADMAVQKVVTENGIKDADYFKHLLAQASATDDFDQSTFIEQLKGDKP

JGI26248J51725_1017740

JGI26248J51725_10177403

F007318

MKINIIIPKNSAPIIIKRQDMLMKSKIRKKTEWTVFLETVTMIAEITAINENV*

JGI26248J51725_1033104

JGI26248J51725_10331042

F015154

AAIAKNYTVTVSSTASSGSTVTGQSSYYLMASSGAETELAARVVGRAQYPDEGNNDAYPIVEVWLNTHRDRYVTATASTA*

JGI26248J51725_1034921

JGI26248J51725_10349212

F040324

MQXEIEKDNSLKKRVDEQIQTRKKIISDFLKDLSLKEKQVTTSKKTGINENTITRMKNNRNFVTSFDNAIALYSVYPDLNKMFLNQWIELSGLQNISEYEVQINGSITKNFDILPLLPNETSSLKIPQNIYINFKPMIVYRYQSITSLLNRQLFIFSQRGLDNNSCENFFKFLSDKICLGIAEDNKQYVGYLTKEEKGYYVINPITKKIYTNSFKINEVYRLILTINDDWSMTSD*

JGI26248J51725_1035927

JGI26248J51725_10359273

F105496

STNLFDLGQLQINPIILGGVGWEVKNSKVLESEIPQILQGWIIDLSD*

JGI26248J51725_1036017

JGI26248J51725_10360171

F015265

PDHMTKNPKLIERNAIVSLNNVGLPVFLNPIYDMTPIASPTKNPTKFSMFSNKNSNGV*

JGI26248J51725_1041249

JGI26248J51725_10412491

F096496

VNKKLVPTNIERNAILTKQQKIHLKSEKVDPKILNNIRRTLEKKLDGLTEDLDIIKNSKSLENWRLLQSEKFQELHKVLESTVMNFKPFYPFAVKTFSKKVGTKKFRMFWMDISEESNFSTERIFEPSFALRKIKHYFNDDSFELLCWAVENNLIPCYKNNAKREEDFELAKNDELYFLKLQNTRTFTN

JGI26248J51725_1046065

JGI26248J51725_10460652

F094386

MDYTEYYELFKQYPECEVEHENHKEGFDGKRNFDLEKAIIKLVAEDETLFLYQERTFNFSMLLLNKQYADLDFWVCTTHALHDISEHKQGLLDDGDYRLYFEGAEGPIEEEEQGY

JGI26248J51725_1050834

JGI26248J51725_10508341

F091752

LYRMSQMLQIETEFLPENIQWLGLGNKYLECQYEITDNWGTKGLDKKDSYDTNFQNEYDFVLDNMKLQG*

JGI26248J51725_1051024

JGI26248J51725_10510241

F105496

NSFLSLLCSTNLFDLGQLQINPIILGGVGWEVKNSKVLESEIPQILQGWIIDLSD*

JGI26248J51725_1053093

JGI26248J51725_10530931

F033593

FTSSHYAARQVDVNLTPETTLQLEQRNRNSFYDLRPVIIQDNLIYESATSADQIELENEVGNLVVNFRNEGYTVRDVEVRNGFAYGGPRVKNLSDRAFTTFSANNAITLEGGAGDGEILLENESGVLQHPQSDSWSTTIADWNTLRFTGTLNSNVDGETMRLSDINGTKSSQNHRINFAFPTEVTKSA*

JGI26248J51725_1054579

JGI26248J51725_10545792

F073088

MNLIQIQFDQFVFLNNTYYLKSEFQSTLKNVIENELNIFIDFKVMLTSIGVKTIKFRKKDKIHKI*

JGI26248J51725_1063452

JGI26248J51725_10634522

F052383

TPKRSADVTIIKGTDIILIKLTTAVKEMDNATSPLANLVNTFDVTPPGAAAIIIKPTAIGADKFSIKATPKATIGKIINCKKNPTKKLFGYLSTLVKSLTESPRPSPSIISAKQRGAILVTISMIYFYETVKL*

JGI26248J51725_1068027

JGI26248J51725_10680272

F016399

LKTGIIGDVVKGIGAGSLVSLVMSRVAPNSSITPIASTGAAFLTGGIVGGAANLILSGGLGQLGGIFGGATTPQQEFGV*

JGI26248J51725_1068206

JGI26248J51725_10682061

F071270

VPDAYTLAKQHLEAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN*

JGI26248J51725_1068853

JGI26248J51725_10688532

F004772

MGTNIKVAQNVSSDGAIITGFRYVDSNLTVGANGGGPVPQTTRVMAIHTYSTIAGEVVITGANQITNKTAKGTAIRYRVGALDSNDMYIGDMGVGVYGVLSVATSGTAAMAPTITLYVG*YAFLF

JGI26248J51725_1071924

JGI26248J51725_10719241

F061863

IMQINTNLLIQTFIAACLVIFGVVTKNSFEQLGFPNHPIGKPIGMGMFIMGWIYTAYILSINKPNKLMFILPSALIVMSVMMMKQYMVKKQNPPMVFPAIFALSWIILGLGAGNHLVGNQKYLGLFASFLVLLSMMVILPFQRKNKIIDGPGQPLFVIAWGILIMLNSNR*

JGI26248J51725_1078160

JGI26248J51725_10781601

F100536

IRPSRKHILIAIGFLSVALAALYPIRGMFPPFYYEQYNTVKDRLETIEGLQIRDSWQHKDIRLEDCGFDVAIDDRNASLTFVDHQDWVALFLKIDGIRISMDGQQRLVTCEQMKSAGLEIDGLSDVLENLGSVIEFCSDQANPILVPDAEYDYWDHLNYAQINFFIEKNNPK*

JGI26248J51725_1079637

JGI26248J51725_10796372

F043676

MNNKQFDALEAGTKVLIKAWDHNVSDQVETVATYNGWCDHPDWGTAVNVSYENVDCHQDSLFSNERETETDIPVSQFQKNVLEVMEV

JGI26248J51725_1080649

JGI26248J51725_10806492

F002665

QGVPEDKVSEIFRYIASVRDNMKYDPKAVLRKIADDVEMEDIKYDTTFWDNYIDEILSKIQKPEPRFADGGLV*

JGI26248J51725_1080936

JGI26248J51725_10809362

F032337

MPKEKIDYVEQDIYDYFGADQDIWKAERHELLGIIGGMSGILELIWHNQVSAERSFKDFKDWLKETKELDMIEVVDN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003589: Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_120m_DNA

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences