3300003069: Coral viral communities from Mount Irvine Bay, Buccoo, Tobago - bleached corals

Overview

Basic Information

• IMG/M Taxon OID: 3300003069
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0059069 | Gp0051329 | Ga0051127
• Sample Name: Coral viral communities from Mount Irvine Bay, Buccoo, Tobago - bleached corals
• Sequencing Status: Permanent Draft
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 611050
• Sequencing Scaffolds: 11
• Novel Protein Genes: 14
• Associated Families: 12

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	9
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pekhitvirus → Pekhitvirus S04C24	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Coral Viral Communities From Mount Irvine Bay, Buccoo, Tobago, From Healthy And Bleached Corals
• Type: Host-Associated
• Taxonomy: Host-Associated → Cnidaria → Unclassified → Unclassified → Unclassified → Coral → Coral Viral Communities From Mount Irvine Bay, Buccoo, Tobago, From Healthy And Bleached Corals

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus

Location Information

• Location: Mount Irvine Bay, Buccoo, Tobago
• Coordinates
  • Lat. (^o): 11.183496
  • Long. (^o): -60.816715
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F015877	Metagenome	251	Y
F027171	Metagenome / Metatranscriptome	195	N
F027690	Metagenome / Metatranscriptome	194	Y
F043885	Metagenome	155	Y
F044154	Metagenome	155	N
F058923	Metagenome / Metatranscriptome	134	N
F062680	Metagenome / Metatranscriptome	130	Y
F062787	Metagenome / Metatranscriptome	130	N
F067639	Metagenome	125	Y
F088830	Metagenome / Metatranscriptome	109	N
F095308	Metagenome	105	N
F095346	Metagenome	105	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0051127_10007	Not Available	853
Ga0051127_10077	Not Available	803
Ga0051127_10134	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pekhitvirus → Pekhitvirus S04C24	784
Ga0051127_10327	Not Available	738
Ga0051127_10340	Not Available	735
Ga0051127_10440	Not Available	711
Ga0051127_10487	Not Available	695
Ga0051127_10538	Not Available	678
Ga0051127_10594	Not Available	659
Ga0051127_10620	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	645
Ga0051127_10795	Not Available	501

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0051127_10007	Ga0051127_100071	F027690	KTAKKAVKEVGDLPKDIVKVADKAIVEPLERPVKKAINVVEQVGADIVEPLEKPVKKLTKEIVETVTGTDKMDYRLPQQPVVTPEITPEIVPDEEETILARGRGTRRTKRPGQGGTIIEGYGALQRGKGERSVV*
Ga0051127_10077	Ga0051127_100772	F062787	MRLQKSSLDEYEYRTTDGQVRYLLAPNLEHAAWAAAELSGGTQFLKDVKRCDEW*
Ga0051127_10134	Ga0051127_101342	F062787	MRLQKQSLKEWQYTRTDGQVRYLLAPDLEHAAWAAAELSGGTQFLKDVKRCDEW*
Ga0051127_10265	Ga0051127_102651	F062680	MDNNKANVTEKRKGAGRPKVIIDQEILKNLASIGCPTYEIASVMNVSAR
Ga0051127_10327	Ga0051127_103272	F095346	NGGLSEQARRRHTGPLCSLVLASRLGGSSLKRXSETRKKHVGEAVRLLSLGYQPAAVALRLQRLFGISRATSFRDCETASAEMDGETMELDADTEPAAMSERRNAMLCDLEQAWMEASAQHNVQELMQLSRAFERLYRMGGDQSHKF*
Ga0051127_10340	Ga0051127_103402	F044154	MVKLNTNISIENVITVIVLIASMTLAYGFMKADISTIKKELTMKVDERSFQADRNLIAFQLDVMMEDIKEIKQILKERK*
Ga0051127_10440	Ga0051127_104401	F067639	MTVSYSELVTQIRAYTEVDSSVLSDTIVNDFIEFAENRTFRDVGCGR
Ga0051127_10487	Ga0051127_104872	F062787	MRLQNSSLKEWQYTQTDGQVRYLLAPDLEHAAWAAAELSGGTQFLKDVKLCDEW*
Ga0051127_10538	Ga0051127_105381	F088830	SWYYAVLASKAVLQQKIAELEGDSFFSPAFYIDKLEGLEDLEMFLKMSWDEWLASLATDQTAVEESK*
Ga0051127_10538	Ga0051127_105382	F027171	VSQVLEIDSLDFDHDGLLHVTALVDEVVLVRKQTIFDPPEYGAALYRGSFYLSDEDLIPATDALLRKLIADRVDDWAPIDPDE*
Ga0051127_10594	Ga0051127_105941	F058923	MSITFVYRDENNKVQVKKIEYEEVKKDLMKYLSHDIRSIIKEKEEDEHNI*
Ga0051127_10594	Ga0051127_105942	F043885	MNIIYKSGNYVSAPMTESLFWSRVGWLRNAMLTAENFEFRLLYFHKLQELMRFVP*
Ga0051127_10620	Ga0051127_106201	F095308	MEPPETIATFMEDGCVSVTVGHLTGVVSSAHLIEPKENQLRQRWLEENAIHDN*
Ga0051127_10795	Ga0051127_107951	F015877	QLMKDVVIIEMAHEITKAGRFETLLEQFLEDQGEAEHIDEIDMGKALFEEREYIDKVKDQKGEREVSVKKMTAYFKSDKLQKFLKKHDFKNYSPTQMAAHIRNKLGGGETRRKVKGKTTYMWYLPWIRKNSDDFKTPDMDEETPF*