3300002039: Delisea pulchra microbial communities from Sydney, Australia, affected by bleaching disease - 2012_LB_B3

Overview

Basic Information

• IMG/M Taxon OID: 3300002039
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103015 | Gp0060411 | Ga0016929
• Sample Name: Delisea pulchra microbial communities from Sydney, Australia, affected by bleaching disease - 2012_LB_B3
• Sequencing Status: Permanent Draft
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 1010422860
• Sequencing Scaffolds: 3
• Novel Protein Genes: 3
• Associated Families: 3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	1
All Organisms → cellular organisms → Eukaryota	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Delisea Pulchra Microbial Communities From Sydney, Australia, Affected By Bleaching Disease
• Type: Host-Associated
• Taxonomy: Host-Associated → Algae → Red Algae → Ectosymbionts → Unclassified → Delisea Pulchra → Delisea Pulchra Microbial Communities From Sydney, Australia, Affected By Bleaching Disease

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Surface (saline)

Location Information

• Location: Long Bay, Sydney, Australia
• Coordinates
  • Lat. (^o): -33.57
  • Long. (^o): 151.15
  • Alt. (m): N/A
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002549	Metagenome / Metatranscriptome	549	Y
F009809	Metagenome / Metatranscriptome	312	Y
F078742	Metagenome / Metatranscriptome	116	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
LBB32012_10033882	Not Available	1630
LBB32012_10037381	All Organisms → cellular organisms → Eukaryota	1526
LBB32012_10074122	All Organisms → cellular organisms → Eukaryota	990

Sequences

Scaffold ID	Protein ID	Family	Sequence
LBB32012_10033882	LBB32012_100338823	F002549	MSKLLKILGVGATPLIDKAVEVADKFIDTPEEKKAFIKEAYEQEVQDRKEARELGKNKSTPDVLTYITLVIACGLGVAIFTDIINWSTLTEVQKGLITTFSGFFLRTLGDVYGYWFGSSMGSEGKTHDLTKLM
LBB32012_10037381	LBB32012_100373814	F078742	VEQLSVGTGSDLIDYGRLEVKEDGSWDVLASSSLAEEGVEGIVSSSDGLIRWHLTVWLDTVLKAEQFPTGVTNLNTSLSDMD*
LBB32012_10074122	LBB32012_100741221	F009809	LGEEDFRDAKSIIELLKENLTLWKEEEEGGQGDDA*