Sample 3300001806

Basic Information
IMG/M Taxon OID	3300001806 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0017769 \| Gp0056242 \| Ga0003255
Sample Name	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk Metatranscriptome (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk Metatranscriptome (Metagenome Metatranscriptome)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	44668563
Sequencing Scaffolds	36
Novel Protein Genes	39
Associated Families	30

Dataset Contents

Total Genome Size

44668563

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	25
All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WOR-3 → candidate division WOR-3 bacterium	2
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Clavicipitaceae → Claviceps → Claviceps purpurea → Claviceps purpurea 20.1	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei

All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WOR-3 → candidate division WOR-3 bacterium

All Organisms → cellular organisms → Bacteria

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Clavicipitaceae → Claviceps → Claviceps purpurea → Claviceps purpurea 20.1

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038

All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium

Ecosystem Assignment (GOLD)
Name	Microbial Community Impact On Carbon Sequestration In Managed Wetland Carbon Farming
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland → Microbial Community Impact On Carbon Sequestration In Managed Wetland Carbon Farming

Ecosystem Assignment (GOLD)

Name

Microbial Community Impact On Carbon Sequestration In Managed Wetland Carbon Farming

Type

Environmental

Taxonomy

Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland → Microbial Community Impact On Carbon Sequestration In Managed Wetland Carbon Farming

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → delta → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Sediment (saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

aquatic biome → delta → sediment

Earth Microbiome Project Ontology (EMPO)

Free-living → Saline → Sediment (saline)

Location Information
Location	Twitchell Island, Sacramento and San Joaquin Delta, California, USA
Coordinates	Lat. (^o)	38.107	Long. (^o)	-121.6475	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Location Information

Location

Twitchell Island, Sacramento and San Joaquin Delta, California, USA

Coordinates

Lat. (^o)

38.107

Long. (^o)

-121.6475

Alt. (m)

N/A

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F001633	Metagenome / Metatranscriptome	660	Y
F005443	Metagenome / Metatranscriptome	400	Y
F008500	Metagenome / Metatranscriptome	332	Y
F009043	Metagenome / Metatranscriptome	324	Y
F014145	Metagenome / Metatranscriptome	265	Y
F015068	Metagenome / Metatranscriptome	257	Y
F018396	Metagenome / Metatranscriptome	235	Y
F020700	Metagenome / Metatranscriptome	222	Y
F024439	Metagenome / Metatranscriptome	206	Y
F027192	Metagenome / Metatranscriptome	195	Y
F032070	Metagenome / Metatranscriptome	181	Y
F035541	Metagenome / Metatranscriptome	172	Y
F041780	Metagenome / Metatranscriptome	159	Y
F048649	Metagenome / Metatranscriptome	148	Y
F052605	Metagenome / Metatranscriptome	142	Y
F059693	Metagenome / Metatranscriptome	133	Y
F060244	Metagenome / Metatranscriptome	133	Y
F067889	Metagenome / Metatranscriptome	125	Y
F069733	Metatranscriptome	123	N
F075035	Metagenome / Metatranscriptome	119	Y
F082737	Metagenome / Metatranscriptome	113	Y
F085747	Metagenome / Metatranscriptome	111	N
F088925	Metagenome / Metatranscriptome	109	Y
F088984	Metagenome / Metatranscriptome	109	Y
F091056	Metagenome / Metatranscriptome	108	Y
F092888	Metagenome / Metatranscriptome	107	Y
F100011	Metagenome / Metatranscriptome	103	Y
F102643	Metagenome / Metatranscriptome	101	N
F105212	Metagenome / Metatranscriptome	100	Y
F105449	Metagenome / Metatranscriptome	100	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
JGI20216J20342_1000185	Not Available	580	Open in IMG/M
JGI20216J20342_1000330	Not Available	584	Open in IMG/M
JGI20216J20342_1000388	Not Available	827	Open in IMG/M
JGI20216J20342_1000505	Not Available	592	Open in IMG/M
JGI20216J20342_1000856	Not Available	834	Open in IMG/M
JGI20216J20342_1001342	Not Available	612	Open in IMG/M
JGI20216J20342_1001343	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	755	Open in IMG/M
JGI20216J20342_1001774	Not Available	583	Open in IMG/M
JGI20216J20342_1002675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	633	Open in IMG/M
JGI20216J20342_1003176	Not Available	838	Open in IMG/M
JGI20216J20342_1003328	Not Available	586	Open in IMG/M
JGI20216J20342_1005278	Not Available	716	Open in IMG/M
JGI20216J20342_1007471	Not Available	665	Open in IMG/M
JGI20216J20342_1008543	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	828	Open in IMG/M
JGI20216J20342_1009910	Not Available	501	Open in IMG/M
JGI20216J20342_1012660	Not Available	562	Open in IMG/M
JGI20216J20342_1012832	Not Available	743	Open in IMG/M
JGI20216J20342_1013882	Not Available	979	Open in IMG/M
JGI20216J20342_1015738	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WOR-3 → candidate division WOR-3 bacterium	1125	Open in IMG/M
JGI20216J20342_1018290	Not Available	811	Open in IMG/M
JGI20216J20342_1018767	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
JGI20216J20342_1020734	Not Available	851	Open in IMG/M
JGI20216J20342_1023972	Not Available	904	Open in IMG/M
JGI20216J20342_1025020	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Clavicipitaceae → Claviceps → Claviceps purpurea → Claviceps purpurea 20.1	1488	Open in IMG/M
JGI20216J20342_1025549	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	522	Open in IMG/M
JGI20216J20342_1029094	Not Available	831	Open in IMG/M
JGI20216J20342_1033786	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes	984	Open in IMG/M
JGI20216J20342_1033828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
JGI20216J20342_1034783	Not Available	677	Open in IMG/M
JGI20216J20342_1035004	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium	541	Open in IMG/M
JGI20216J20342_1035361	Not Available	690	Open in IMG/M
JGI20216J20342_1040688	Not Available	567	Open in IMG/M
JGI20216J20342_1040748	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division WOR-3 → candidate division WOR-3 bacterium	571	Open in IMG/M
JGI20216J20342_1046666	Not Available	577	Open in IMG/M
JGI20216J20342_1050408	Not Available	522	Open in IMG/M
JGI20216J20342_1070709	Not Available	665	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI20216J20342_1000185	JGI20216J20342_10001851	F014145	DFQPSSLPACTASSTANKSAG*FASLLPDGWFLQPPDQCFLARRLPPLLRDRPLVTAFRSPTTAATSRRPPFRGQSSQPATSRPSRLLSVPVRPFGSTTAPRFAPVAAASLPLARCTSTTRFGLPRPRSPLPSGIFTSLGIKAFNRFCCLPVHLANPPDFLSLPAARPGESWGCGSSFQVRYVSAGLLFLKP
JGI20216J20342_1000330	JGI20216J20342_10003301	F041780	SKPLVAACSPTGMHGQNKALKMIGLNSLCSPRPPFGGSASTLRAQPANHPENRNLETAFLLPCSDFPYPERRDRLKRSQPASSISLPRPIRVRSVLNSLPEAFGLRRGHGHKTRFPLAARQSQPILEPPLPFRVSPPPDHNTQSDSDCEVYLSKMPDILSLPERIIE*
JGI20216J20342_1000388	JGI20216J20342_10003881	F105212	HKGSPKNGGSGQKFLIGLEDKSNGSQDPRHRRVGVQDHKEQSDGIRTAKKC*
JGI20216J20342_1000505	JGI20216J20342_10005051	F085747	FQVICLAAKLSAGIHGTELREQNRRTVSGLLPGAPFRAHRINAPRAVCWPDSVRSRRLVTAFYSLGTTACFQATIPRSKLPACYFNALPNRSSEPFDRSLLRPNRFAPGPVGLIAGGPFPGLRPSTFETASNLHSPLGVLAPARSKRSIRFGSEKPTFRLRPIVLRSPQPFYFVKPVTDHRSELATFPEARCSSNL
JGI20216J20342_1000856	JGI20216J20342_10008561	F105212	HKRSPKNGGSGQRFLIELEAKSHGSQDPHHRWVGVWGNEEQSEEARITKKC*
JGI20216J20342_1001342	JGI20216J20342_10013421	F052605	GKIKVVRFKIIPGDWGKAGSGWLTRLLLTAPLGPAEAEFTSSSGGVRTPSNANEELGSEKRLEAASS*
JGI20216J20342_1001343	JGI20216J20342_10013432	F092888	VHEQGSLEQNQNLFTLRVRRNSGTIGFLAIGVCFTVVSSILIQAFVSGNPATRSPYCEPFSSIVLAIIGYIGLLTSWKEITITVDDLNKRLTATTRNLFMRTSHKREATFSEIRTMQGTIDERTNSVKVTIARDNLEAIQFQLDCNSYGPLEKYLKTLL
JGI20216J20342_1001774	JGI20216J20342_10017741	F082737	MVPSDPRCQLAPQPACQVACHIQLAERLSRLAPRPRCFSVGASLRSGPSASLPVRSQNLEADFHSPTATSLLPDGHSGVRVPALLLQFCRPIPVCPVRFDLHPRSVSRTTWDFCDQNPLLSGPAPLQPAALNRRSPSGLFALSDQSTRSRWPTENLLSGTPDLPSLPTGRMIKY
JGI20216J20342_1002675	JGI20216J20342_10026752	F001633	LLPAHPLGALAFAGWVLPDATLRGMRMFRSHGGTVPAVSGRELLSEASSPGSVAPCRERRAGRGADTPANLPSRRHRCHGDGAGFWPAVGPALRV*
JGI20216J20342_1003176	JGI20216J20342_10031761	F088984	MDKAWMALVRLPSISLWWAHVTVTPEASRTAVFSSGTLNGFRGVIPMGGQQQPSSGVGASLLKNAQKKAAKKHTSDRMKSIIPYRRPLDT
JGI20216J20342_1003328	JGI20216J20342_10033281	F009043	VPSDLIHSQTPRRHARHRALQPESPGAVPSAPRRLRWESNGSMLPGSPASFPGWSRHLEAAFHSPETTARFQTTISRSKLPTCFFDTLPAVCPARSAFDSPTRSGSPRYAQDRYRKPVA*LAPDTPNPSSDLHSPLGPFGPFRIKAFNPIPGREAHLPNAPDCLSLPNAGSILLVPTLDQRSRLASPSAACCSSN
JGI20216J20342_1005278	JGI20216J20342_10052781	F100011	MPVADDCSPSEGDAEPASAFLSPVARDYPSRALRGFFMPGDAST
JGI20216J20342_1007471	JGI20216J20342_10074711	F020700	MTARLSLHLRFAGLRPKTSPSVFSDAAAGTAATPIRLNFPVLFQEVSPEKVRRIL
JGI20216J20342_1008543	JGI20216J20342_10085431	F092888	VHEQGKLEQNQNLFSLRVRRTSGTISFLAIGVCFTIVSFILIQAMVSGHPAWYSAAYEPISSLVIAAVGYFGFLTSWKELSITVNDLDKRFTATTRNLFTRTSNKREATLSEIQAMDSKVDERTNTVKVTIARDNQEAIQFQLDCNSYGPLEKYLKTLLPKIPIITRDTRNYEADMLPGHINAV
JGI20216J20342_1009910	JGI20216J20342_10099101	F100011	MPADDDCSPSEGEAEPASTFLSPVARDYPSRALRGSFHTRSAST
JGI20216J20342_1010211	JGI20216J20342_10102111	F102643	RPIAKKYSDGKVKRTLKRRSKVLETVKRETDGASNYPMGIQIIHFCGASQLFNKSTECLVVWLLGYCVRYLVCMFVNIKCRRGIFHGGR*
JGI20216J20342_1012660	JGI20216J20342_10126601	F015068	EQQASEDVADLERSVAETLEIETGGGERREIGRFRKAGRQIASPVERFDPAGGNNPKGEWRPEARFASESRKLQRARSSDAALIGANRSGPPSRRAERAVEAASHGAK
JGI20216J20342_1012832	JGI20216J20342_10128321	F069733	CLLMVGRSSFCNCSFPSGLYIPSLHRLSGQSCDWFENRRSLDCPYEQLGKPDLKGVSFLQILIQAFLRLLKFSTCFMLSLLRDYLISLPCGFVIKQKIAECRSFVRRIKIFLRISLSHAAFANLYYLVSIYPSHPCEQPAQLKLFTKIHLSYSASTYLSYPCEQLARLRLFASICLAAKIHSLLRGLASAWIFVSYETLKPLCLKRTFSTSWDRTVSDIAIVDLSCTGILINTG*
JGI20216J20342_1013882	JGI20216J20342_10138822	F024439	RWLGQTSPYEAPPGVSASSQLFDRDVAVPGTTLSGLTGLSERSARRSGAIGSPPPPRRFHDHEEFRRSAVRAVRRPPGSSRRLRRPLRVRAEMPSPAMPGQVAPPGVSRPFSDISGGIRITRVCLTRHDPSSGFLAPSTGSSPSGLADSLGPLPLLGFSLVQLFRAAGP*
JGI20216J20342_1015738	JGI20216J20342_10157381	F067889	HGHKEEDVRKLIAAAAILAVVFVIGCQDTKKVTELQGKVDTMTQQITDMTGQVAKLTAERDSLGKVVTDLMAKIPPAKGGKTVTPPPAKGGLKPPTKK*
JGI20216J20342_1018290	JGI20216J20342_10182901	F069733	PK*PLMIFRHIELLLFSNLLSINSCLLMVGRSSFCNCSFPSGLYIPSLHRFSGQPCDWFENRRFLDCPCEQFGKPDLKGVGFLQISTQAFLRLLEFSTRFTLYLLINRSISLPCGFVIKQKIAECRSFVRRIKISLRISLSRAAFANLYELASIYLGRSCEQPAQLKLFTKINLDYSASTYLSYPCEQLARLRLFTSTCLAAKIHSLLRGLASAWIFVPCETLKPLCLKRTFSTSWDRTVSDIAIVDYPVQGYQLTLANSTKYRYLALLV
JGI20216J20342_1018767	JGI20216J20342_10187673	F018396	VRPAWWHQWFGSRVSDNADALQRLLRKICRQETALAWHLADRARAVRFAPHRLSLEGLAARERQNAHAMARETGGEATLAPTASPAHRPGSLTATKLIQDLVEVEDLYTLYRQARWLTPDTILRDTLERMAAEEDHSSQTIRRILGTMDSYVTDRPS*
JGI20216J20342_1020734	JGI20216J20342_10207341	F035541	CPGDVACSLGYIRSKGMANHRATTIRRSDVKRLALIFTLAILAGALLVPAANAQSNLTNLNNIPVTDTLAVGTFEWDVWSGYNKGFERGRRIGTRLFGSLYDNLEFGMKWGISRTAGPVELALKYKVIDEYNGRFPISLAVGVEGITGNSQRTGIDPTVYGVLGIHDLKFVGHWWDWYVGVNHNPTGLDTEDNSLFGGFKFWINDDIQFNADYMGYSDNEWYKLTGGFNYNWINHIGFQGWVERDSLSETNVFVLEMAVRADMRDLTAEVSDPE*
JGI20216J20342_1022406	JGI20216J20342_10224061	F091056	VIQRMRKTMFVLFALLVMALPLAASANGSAVDQFSAVKYIRNLSDLACQYRDHGLSLQLDGYNYEWLIFSDSCIRQNIEAELVVLGRSREHIIDPLAWQLHVDMLNATIEQINTITDELLTYNFYPNEDKIVSNIAKKANEGTSVLGKIEDELGRGEERNYADLATYGEKLWMIGNDLICLVKDLDFENWTALYSGDIKAGDCCKNDFQVCTACWDGKACGDGCPTVSTACVKGKVCQEKVCAKKSCGEKKCGNKCEKKASCSSCK*
JGI20216J20342_1023972	JGI20216J20342_10239722	F035541	VKRLALISTLAILAALTIIPAAFAAANTTKLNNIPVTDTLAQGTMEWDVYARYNEDFHRGRRIGTRLFLSLYDNFEFGMAWGVSRPAGPVELALKYKVLDEYNGFPVSVAIGAEGITGNYQRTNVDPTYYAVVGLHDVHLGTSWWDWYVGVNHNPTGYDDEDNSIFGGFKYWINKDWQVNADYLGYSDNEENVMSAGVNYDWAKHIGFQGWVERDSVTEENVFVLQLAVQGDMRDLTAEVSDPE*
JGI20216J20342_1025020	JGI20216J20342_10250201	F032070	MPFTATPNYTGVPDFGLIHIDPNETAQAFQVYLDTASRLTGVSLDDISCTVSRIPADVTTVNLAELVGLGMRLFDAVVWLHAGRPTSHPLVIEPTLTPDTIPSMHEVARAVFYCYFMLLTQARYPASAASTDKPKIPNFLRVIMGMEDDQSSYVERICSFEPQKFDPAWVQYVSFRNFGQEVLSRFGLGVAGYRMFGPFGLYDARADLPANLRPAFNFARRLAKAASSWSVHPLTRSPNVLTARGNLNKNLGNLILDSFTDDQIDEMVRTKILFKKPEREPAHRNYXTWAEEDDISGTGQIFSS*
JGI20216J20342_1025549	JGI20216J20342_10255492	F105449	MTLKCVECGRIALKLNAEKKCEECAKKDESMKSYFTKLFFINEGCARLVPAT*
JGI20216J20342_1029044	JGI20216J20342_10290441	F091056	MRKFMAITVALLVLGMAVPAFANGSAVDQFAAVKYIRNLSDLACQYRDHGLSLQLDGYNYEWLIFQDSCIRDNIEAELVVLGRNREHLIDPLAWQLHVDMIAATIEQINTITDELVTYNFYPNEDKIVEKIAKKANEGTKILGNIEDELGRGEERNYADLATYGEGLWMIGNDLNCLVKDLDFENWTALYSGYLCAGDCCQNEFPVCAACWDC
JGI20216J20342_1029094	JGI20216J20342_10290941	F067889	MVKSHEHKEEDVRKLIAAAAILAVVFVVGCQDTKKVTELQGTVDKLTQQVTDMTGQVAKLTTERDSLNKVVVDLMAKMPQPKAGKPALKPAPAGAKKAAPPTKK*
JGI20216J20342_1033786	JGI20216J20342_10337862	F005443	MLSNTLNTNEVKNSSGTEVEFSRLSTNERKTEFSQIAETPSQPHRLTIAHQETGESIKKRRRSLVRFDKTVMSGVDATVPVTVSAYAVLDSPIGALTATTEMGNVLAELMSFLASDGSNTTIKYDGTGSGASALLNGGL*
JGI20216J20342_1033828	JGI20216J20342_10338282	F088925	MQERKCSKCGSANVYTNVGNHWQQNGVVLQTIGENRFTDLFQTNAFLCLDCRNLDIEVLETTTMYGKQTTLAESIQGSKNWVKA*
JGI20216J20342_1034783	JGI20216J20342_10347832	F048649	MKKLIIALAALMVSAAAYGQGQFNFNNRVGTEVNARFVLSTDAANTSSIGSPDWTVKLTGGAPGGPLAALTPDSTGFRGAAGTSSAGFVTQISPTVAGVAAGSPAAIGVTVLGPGGVSQTFGPFTVSLGGGTITPPNLPLGTSPLVVNAVPEPT
JGI20216J20342_1035004	JGI20216J20342_10350041	F027192	MKRFMFVLALLLVVSLSSAFAQSEAEALVTASVESELVLVNVDGDWGLFSPGQTYTITPGGFKEPPGPGEGAGITVDAIGFEVDGNPGSDVLVSMILPSAFNSDDENGNLPLSNWNYGWNYDNDPGVAFSSAGPVTGSAVVVTIGGGAASGLFLGATVTVPTTAFA
JGI20216J20342_1035361	JGI20216J20342_10353612	F048649	MKKLIIALAALMVSIAAYGQGQFVFNNRIGTEVNARFITQSDPANGSSSSIGTPDWSVKLMGGPVGGTLVALDPSTTTFRGAPGSTAAGYVTSITPAVPGVAAGGTASVLVTVLGPGGLSQNFGPYTVAGLGGGTA
JGI20216J20342_1040688	JGI20216J20342_10406881	F008500	GLLAYVIADANDAIVEDSDILLDTNQNNFRAVTSVSCSNCHSAGLIPVVDEVREIALKNAREIGLDRDEVEQLESIYVTAPEFARVVQEDSQSFYQRALQQASLPIQGGDPVSGTFLRFDQDMRIEDAAGDLGLTPDELADAIDLLDPTLTVLERGTLDRDDFTNVFVDSLCILSEVLDNRPLQQDCD
JGI20216J20342_1040748	JGI20216J20342_10407481	F075035	VTSAMIVPNTIVRADVAASFKAPYTDTADYAKAAPASDSARVAGNSHLLQNKDTTALWNAKTLQGKDTSALWNAKTLQGKDTVALGNAKLLQGKDTTALWNAKTLQGKDTTGFVRTGQADAVTSAMIVLNGTIVRADVAASFKAPYTDTADYAKAAPAVDSAAVAGNSHLLQGKDTTALWNAKTLQGKDT
JGI20216J20342_1046666	JGI20216J20342_10466662	F059693	MVFGTIHRSGRGRRESPLPPAIPHGAKDSVGCPRGESRDSGLGTHEVRVHAVRLGGRSRLDASSVLSTGRSKGLVVSRGASRKE
JGI20216J20342_1050408	JGI20216J20342_10504081	F060244	ARHLLFPFGSGSTCCLARPDLTDVGISSALHTGLGFFGLLNAAALAPPYGWGDHEPRGPVAQRFHVLHRIQERLGPLCYTGSPGSARRVTLDNPDSTACPFGSSLKQPRMAGFAFTMLDERSVV*
JGI20216J20342_1070709	JGI20216J20342_10707092	F048649	MKKLIIALAALMVSIAAYGQGQFVFNNRIGTEVQARFITSTDPANGSSSSIGSPDWSVQLLGGPVGGTLVALDPSSTTFRGAPGTAAAGYVTSVTPVVPGVGVGGNASVQVKVLGPGGVNQTFGPYTVNGLGGGTTTPPNLQLGTSPLVVTTGVIPEPTTLAL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001806: Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk Metatranscriptome (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences