NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 2199352031

2199352031: Cave microbial community (Speleothem B)



Overview

Basic Information
IMG/M Taxon OID2199352031 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0047522 | Gp0053926 | Ga0011321
Sample NameCave microbial community (Speleothem B)
Sequencing StatusPermanent Draft
Sequencing CenterArizona Genomics Institute
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size181900666
Sequencing Scaffolds8
Novel Protein Genes9
Associated Families9

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available5
All Organisms → cellular organisms → Bacteria3

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSpeleothem And Rock Wall Surfaces Microbial Communities From Kartchner Caverns, Benson, Arizona, Usa
TypeEnvironmental
TaxonomyEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Speleothem And Rock Wall Surfaces → Speleothem And Rock Wall Surfaces Microbial Communities From Kartchner Caverns, Benson, Arizona, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)terrestrial biomecave wallrock
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Subsurface (non-saline)

Location Information
LocationUSA: Arizona
CoordinatesLat. (o)31.837801Long. (o)-110.350292Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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