Basic Information | |
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Taxon OID | 3300029930 Open in IMG/M |
Scaffold ID | Ga0119944_1000281 Open in IMG/M |
Source Dataset Name | Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Hong Kong |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 8810 |
Total Scaffold Genes | 25 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 9 (36.00%) |
Novel Protein Genes | 5 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 3 (60.00%) |
Associated Families | 5 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment Plant In Pearl River Delta Area, China |
Source Dataset Sampling Location | ||||||||
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Location Name | China: Pearl River Delta area | |||||||
Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | .5 | Location on Map | ||
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F023571 | Metagenome / Metatranscriptome | 209 | Y |
F029416 | Metagenome / Metatranscriptome | 188 | Y |
F042214 | Metagenome / Metatranscriptome | 158 | Y |
F058099 | Metagenome / Metatranscriptome | 135 | Y |
F080645 | Metagenome / Metatranscriptome | 115 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0119944_100028112 | F058099 | GAGG | MNKDLLISQLRLGIDGNSILQILDALCDGMDSGESSQDFCPTLDEIQF |
Ga0119944_100028116 | F080645 | N/A | MTLTSQQINDLATAHCYRVIDNMDADDLFSYAMQMMLQSFDKNPGQGDTDVDMLIEDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKTTQF |
Ga0119944_100028119 | F029416 | GAG | MPTLSQKVYANLFSSDQWDLIYAMVGHALDDDDFDPEDVYTIRNKIHAIFDDND |
Ga0119944_10002812 | F042214 | AGG | MILTTSELIQLVTTGMVEVSDDLILRMSESAESYEDSDWYNDPNCVMSKHHY |
Ga0119944_10002817 | F023571 | N/A | MNLCNWGATMVPHHAVDFSQFNHTTMNFSALTFENHAIKGATKARHTFENGWSISVVAGAKDSGLYGIIGDDTFEVAVIRPNGNMLEDVLPWQTPVQITTLCHLIEML |
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