NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080645

Metagenome / Metatranscriptome Family F080645

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080645
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 95 residues
Representative Sequence MTLTSEQISDLCQAHCYRVIDNMDMDDLVSYAVQMMYQSFDKNPGQNDTDLDMLIEDIWVAEGEDDDATQEFIAGVVGNDLAEEIVKTTQF
Number of Associated Samples 90
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 20.00 %
% of genes near scaffold ends (potentially truncated) 21.74 %
% of genes from short scaffolds (< 2000 bps) 57.39 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (40.870 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(21.739 % of family members)
Environment Ontology (ENVO) Unclassified
(33.043 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(38.261 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.62%    β-sheet: 4.20%    Coil/Unstructured: 41.18%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.70
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF13392HNH_3 1.74
PF04965GPW_gp25 1.74
PF01467CTP_transf_like 0.87
PF13443HTH_26 0.87
PF12705PDDEXK_1 0.87
PF01844HNH 0.87
PF13578Methyltransf_24 0.87
PF13508Acetyltransf_7 0.87
PF14236DUF4338 0.87
PF14240YHYH 0.87
PF02371Transposase_20 0.87
PF11649T4_neck-protein 0.87
PF07275ArdA 0.87
PF16724T4-gp15_tss 0.87
PF07460NUMOD3 0.87
PF01541GIY-YIG 0.87
PF00805Pentapeptide 0.87
PF13529Peptidase_C39_2 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG1357Uncharacterized conserved protein YjbI, contains pentapeptide repeatsFunction unknown [S] 0.87
COG3547TransposaseMobilome: prophages, transposons [X] 0.87
COG4734Antirestriction protein ArdADefense mechanisms [V] 0.87


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.13 %
UnclassifiedrootN/A40.87 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001419|JGI11705J14877_10117754All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Mazuvirus → Mazuvirus scam7757Open in IMG/M
3300001533|MLSed_10138940All Organisms → Viruses → Predicted Viral1049Open in IMG/M
3300001533|MLSed_10141475All Organisms → Viruses → Predicted Viral1034Open in IMG/M
3300001533|MLSed_10308522Not Available562Open in IMG/M
3300001948|GOS2228_1013151All Organisms → Viruses → Predicted Viral1679Open in IMG/M
3300001968|GOS2236_1001911All Organisms → Viruses → Predicted Viral1139Open in IMG/M
3300001968|GOS2236_1070587All Organisms → Viruses → Predicted Viral1982Open in IMG/M
3300004112|Ga0065166_10423246Not Available558Open in IMG/M
3300005512|Ga0074648_1001372Not Available25794Open in IMG/M
3300005525|Ga0068877_10072673All Organisms → Viruses → Predicted Viral2209Open in IMG/M
3300005613|Ga0074649_1030359All Organisms → Viruses → Predicted Viral2733Open in IMG/M
3300005613|Ga0074649_1083250All Organisms → Viruses → Predicted Viral1217Open in IMG/M
3300005739|Ga0076948_1030372All Organisms → cellular organisms → Bacteria1427Open in IMG/M
3300005805|Ga0079957_1010613Not Available6950Open in IMG/M
3300006030|Ga0075470_10142424Not Available703Open in IMG/M
3300006641|Ga0075471_10162059All Organisms → Viruses → Predicted Viral1178Open in IMG/M
3300006734|Ga0098073_1000307All Organisms → cellular organisms → Bacteria18271Open in IMG/M
3300006734|Ga0098073_1055056All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Shandvirus → Shandvirus sh35527Open in IMG/M
3300006810|Ga0070754_10055335All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2079Open in IMG/M
3300006868|Ga0075481_10002949All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6813Open in IMG/M
3300006869|Ga0075477_10151768All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage968Open in IMG/M
3300007212|Ga0103958_1153546All Organisms → cellular organisms → Bacteria2131Open in IMG/M
3300007344|Ga0070745_1329894Not Available539Open in IMG/M
3300007538|Ga0099851_1030167Not Available2171Open in IMG/M
3300007538|Ga0099851_1046531All Organisms → Viruses → Predicted Viral1708Open in IMG/M
3300007538|Ga0099851_1189400Not Available752Open in IMG/M
3300007539|Ga0099849_1109118Not Available1097Open in IMG/M
3300007539|Ga0099849_1361133Not Available515Open in IMG/M
3300007541|Ga0099848_1032152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales2182Open in IMG/M
3300007542|Ga0099846_1117012Not Available975Open in IMG/M
3300008055|Ga0108970_10972768Not Available839Open in IMG/M
3300008106|Ga0114339_1054206Not Available1877Open in IMG/M
3300008113|Ga0114346_1202962Not Available789Open in IMG/M
3300008120|Ga0114355_1235584Not Available551Open in IMG/M
3300008266|Ga0114363_1081661All Organisms → Viruses → Predicted Viral1204Open in IMG/M
3300009009|Ga0105105_10177430Not Available1091Open in IMG/M
3300009154|Ga0114963_10000153Not Available43103Open in IMG/M
3300009165|Ga0105102_10682280Not Available575Open in IMG/M
3300009165|Ga0105102_10945872Not Available500Open in IMG/M
3300009169|Ga0105097_10928885Not Available500Open in IMG/M
3300009444|Ga0114945_10277006Not Available984Open in IMG/M
3300009469|Ga0127401_1169211Not Available545Open in IMG/M
3300009470|Ga0126447_1015403All Organisms → Viruses → Predicted Viral1929Open in IMG/M
3300009594|Ga0114941_112210Not Available554Open in IMG/M
3300009626|Ga0114943_1000135All Organisms → Viruses → Predicted Viral2651Open in IMG/M
3300010297|Ga0129345_1188181Not Available736Open in IMG/M
3300010354|Ga0129333_10061162All Organisms → Viruses → Predicted Viral3511Open in IMG/M
3300010354|Ga0129333_10083703All Organisms → Viruses → Predicted Viral2954Open in IMG/M
3300010354|Ga0129333_10122207All Organisms → Viruses → Predicted Viral2398Open in IMG/M
3300010354|Ga0129333_10130535All Organisms → Viruses → Predicted Viral2311Open in IMG/M
3300010354|Ga0129333_10190769All Organisms → Viruses → Predicted Viral1866Open in IMG/M
3300010354|Ga0129333_10281547All Organisms → Viruses → Predicted Viral1492Open in IMG/M
3300010354|Ga0129333_10833197All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Atlauavirus → Synechococcus virus AC2014fSyn7803C8784Open in IMG/M
3300010389|Ga0136549_10026069All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3380Open in IMG/M
3300011268|Ga0151620_1000166All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes25405Open in IMG/M
3300011984|Ga0119931_1005277All Organisms → Viruses → Predicted Viral1407Open in IMG/M
3300012000|Ga0119951_1020938All Organisms → Viruses → Predicted Viral2339Open in IMG/M
3300012471|Ga0129334_1025930All Organisms → Viruses → Predicted Viral4657Open in IMG/M
3300012970|Ga0129338_1292233Not Available9137Open in IMG/M
(restricted) 3300013130|Ga0172363_10718549Not Available625Open in IMG/M
(restricted) 3300013133|Ga0172362_10798572Not Available628Open in IMG/M
3300014050|Ga0119952_1097666All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01692Open in IMG/M
3300017766|Ga0181343_1000673Not Available14459Open in IMG/M
3300017788|Ga0169931_10054468All Organisms → Viruses → Predicted Viral4251Open in IMG/M
3300018665|Ga0188882_1010435All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes830Open in IMG/M
3300020151|Ga0211736_10093129Not Available732Open in IMG/M
3300021356|Ga0213858_10011072Not Available4265Open in IMG/M
3300021364|Ga0213859_10000226All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes26003Open in IMG/M
3300021961|Ga0222714_10000723All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae37663Open in IMG/M
3300021961|Ga0222714_10090532All Organisms → Viruses → Predicted Viral1965Open in IMG/M
3300022063|Ga0212029_1021509Not Available869Open in IMG/M
3300022187|Ga0196899_1094963Not Available892Open in IMG/M
3300022198|Ga0196905_1005475All Organisms → Viruses → Predicted Viral4458Open in IMG/M
3300022198|Ga0196905_1012661All Organisms → Viruses → Predicted Viral2751Open in IMG/M
3300022198|Ga0196905_1048813Not Available1211Open in IMG/M
3300022200|Ga0196901_1012507All Organisms → Viruses → Predicted Viral3551Open in IMG/M
3300022200|Ga0196901_1028498All Organisms → Viruses → Predicted Viral2193Open in IMG/M
3300022563|Ga0212128_10019272All Organisms → Viruses → Predicted Viral4377Open in IMG/M
3300024239|Ga0247724_1010828Not Available1351Open in IMG/M
3300024262|Ga0210003_1126132All Organisms → Viruses → Predicted Viral1127Open in IMG/M
3300025057|Ga0208018_100422All Organisms → cellular organisms → Bacteria11307Open in IMG/M
3300025135|Ga0209498_1126894Not Available997Open in IMG/M
3300025732|Ga0208784_1002403All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae7436Open in IMG/M
3300025751|Ga0208150_1017011All Organisms → Viruses → Predicted Viral2587Open in IMG/M
3300025768|Ga0209497_1012342Not Available595Open in IMG/M
3300025853|Ga0208645_1010415All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5734Open in IMG/M
3300027693|Ga0209704_1000598All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM016975Open in IMG/M
3300027741|Ga0209085_1000047All Organisms → Viruses80721Open in IMG/M
3300027762|Ga0209288_10136625All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Synechococcus phage S-CRM01784Open in IMG/M
3300027769|Ga0209770_10000616All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes19165Open in IMG/M
3300027777|Ga0209829_10317195Not Available630Open in IMG/M
3300029930|Ga0119944_1000281Not Available8810Open in IMG/M
3300029930|Ga0119944_1000570Not Available6597Open in IMG/M
3300029930|Ga0119944_1001116All Organisms → Viruses → Predicted Viral4795Open in IMG/M
3300029930|Ga0119944_1035847All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01626Open in IMG/M
3300031539|Ga0307380_10637116All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes910Open in IMG/M
3300031539|Ga0307380_10858145Not Available742Open in IMG/M
3300031565|Ga0307379_10508380All Organisms → Viruses → Predicted Viral1125Open in IMG/M
3300031673|Ga0307377_10300289All Organisms → Viruses → Predicted Viral1217Open in IMG/M
3300031758|Ga0315907_10084723All Organisms → Viruses → Predicted Viral2730Open in IMG/M
3300031787|Ga0315900_10147833All Organisms → Viruses → Predicted Viral2180Open in IMG/M
3300031951|Ga0315904_10203174All Organisms → Viruses → Predicted Viral1943Open in IMG/M
3300031963|Ga0315901_11137421Not Available534Open in IMG/M
3300032050|Ga0315906_10064341All Organisms → Viruses → Predicted Viral3760Open in IMG/M
3300032093|Ga0315902_10046378All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM015051Open in IMG/M
3300032116|Ga0315903_11070537Not Available556Open in IMG/M
3300033418|Ga0316625_100125245All Organisms → Viruses → Predicted Viral1522Open in IMG/M
3300033994|Ga0334996_0000003Not Available172253Open in IMG/M
3300033994|Ga0334996_0027684All Organisms → Viruses → Predicted Viral3645Open in IMG/M
3300034066|Ga0335019_0000360All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes28652Open in IMG/M
3300034066|Ga0335019_0359951Not Available898Open in IMG/M
3300034072|Ga0310127_191584Not Available768Open in IMG/M
3300034103|Ga0335030_0000301Not Available48176Open in IMG/M
3300034106|Ga0335036_0246970All Organisms → Viruses → Predicted Viral1211Open in IMG/M
3300034112|Ga0335066_0596367Not Available572Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous21.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater6.96%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient6.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater6.09%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment5.22%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake4.35%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton3.48%
AquaticEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic3.48%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs3.48%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil3.48%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake2.61%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.61%
BenthicEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Benthic2.61%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.61%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine2.61%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment2.61%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.74%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.74%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.74%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond1.74%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.87%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.87%
Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water0.87%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.87%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.87%
Drinking Water Treatment PlantEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Drinking Water Treatment Plant0.87%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.87%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.87%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.87%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment0.87%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.87%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water0.87%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.87%
EstuaryHost-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary0.87%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001419Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)EnvironmentalOpen in IMG/M
3300001533Benthic freshwater microbial communities from British Columbia, CanadaEnvironmentalOpen in IMG/M
3300001948Marine microbial communities from Chesapeake Bay, Maryland, USA - GS012EnvironmentalOpen in IMG/M
3300001968Marine microbial communities from Lake Gatun, Panama - GS020EnvironmentalOpen in IMG/M
3300004112Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)EnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005525Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaGEnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300005739Cyanobacteria communities in tropical freswater systems - freshwater lake in SingaporeEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006030Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006734Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300007212Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Bottom layer) 7 sequencing projectsEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300008055Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393Host-AssociatedOpen in IMG/M
3300008106Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-53-LTREnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300009009Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009469Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 6m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009470Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, surface; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009594Groundwater microbial communities from Devils Hole, Nevada to study Microbial Dark Matter (Phase II) - Devils HoleEnvironmentalOpen in IMG/M
3300009626Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP1EnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300011268Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555EnvironmentalOpen in IMG/M
3300011984Freshwater microbial communities from drinking water treatment plant - The University of Hong Kong - Raw_water_201107EnvironmentalOpen in IMG/M
3300012000Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007AEnvironmentalOpen in IMG/M
3300012471Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012970Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013130 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2EnvironmentalOpen in IMG/M
3300013133 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2EnvironmentalOpen in IMG/M
3300014050Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007BEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300018665Metatranscriptome of marine microbial communities from Baltic Sea - LD30M_ls2EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300024239Subsurface sediment microbial communities from gas well in Oklahoma, United States - OK STACK MC-2-EEnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025057Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025135Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment (SPAdes)EnvironmentalOpen in IMG/M
3300025732Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025768Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP1 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300027693Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027741Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027762Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027769Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027777Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300029930Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033994Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034072Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-AEnvironmentalOpen in IMG/M
3300034103Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034112Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI11705J14877_1011775413300001419Saline Water And SedimentLCSHKIPAILHLFITEPPMTNTTLTSEQVSDLLTAHCYRVIKNMDMNFLVSYAMQMMAQSFDQNPGQGDTDVNMLIEDIWVAEGEDDESTHEFIAGVLGDDDLTDEIMATTQF*
MLSed_1013894023300001533BenthicMNLTTEQISDLCQAHCYRVIDNMDMDDLVSYAVQMMYQSFDKNPGQNDTDVDMLIEDIWVAEGEDDDATSEFIAGVVGNDLADEIMKNTQF*
MLSed_1014147523300001533BenthicMNLTSEQISDLCQAHCYRVVDNMDLDDLISYAVQMMYSSFDKNPGQNDTDIEMLIEDIWVAEGEDDDATSEFIAGVVGSDLADEIMKSTQF*
MLSed_1030852213300001533BenthicSDLCQAHCYRVIDNMNHDDLVSYAVQMMYQSFDKNPGQNDTNLSMLVGDIRVAEGEDDDATSEFIAGVVGNELADEIMKNTQF*
GOS2228_101315143300001948MarineHCNRVIDNMDMDDLVSYAVQMMMTSFDQNPGQGDTDVDMLIEDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKTTQF*
GOS2236_100191123300001968MarineMTLTTEQISDLCQAHCYRVIEQIDMDDLISYAVQMMYQSFDKNPGQNDTDLPMLIEDIWVAEGEDDDSTLEFIAGVVGDDLADEIMKTTQF*
GOS2236_107058753300001968MarineMTLTTEQVSDLCQAHCYRVIENMDMDDLISYAVQMMYQSFDKNPGQNDTDLDMLIEDIWVAEGEDDDSTLEFIAGVVGDDLADEIMKTTQFQ*
Ga0065166_1042324623300004112Freshwater LakeVPLYLQSQPLKLMTKLLTSEQVSNLLQDHCYRVINEMDQDDLFSYAVQMMMQSFDQNPGQGDTDVAMLIEDIWVAEGEDDDSTLEFIAGAVGDELAEEIMKTTQF*
Ga0074648_1001372223300005512Saline Water And SedimentMNLTPSQVSDLCQAHCYRVIDNMDMDDLVSYAVQMMSQSFDQNPGQGDTDVDMLIEDIWVAEGEDDDSTLEFIAGVVGNELAEEIVKTTQF*
Ga0068877_1007267333300005525Freshwater LakeMRTSWWGTDGTEEPLAQGGCSGAGGGSTLWESRTFLLMALTTEQVSELLTAHCYRVIDNMSSDDLFSYAMQMMIQSFDQNPGQSDTDIAMLIEDIWVAEGEDEDSTQEFIAGVVGNDLAEETMKTTQF*
Ga0074649_103035963300005613Saline Water And SedimentMTSTTITSEQVSDLLTAHCYRVIDNMDMKDLVSYAVQMMSQSFDQNPGQGDTDVDMLIEDIWVAEGEDDESTHEFIAGVLGDDLTDEIMATTQF*
Ga0074649_108325043300005613Saline Water And SedimentMNLTPSQVSDLLDAHCYRVIENMDMDDLISYAVQMMSQSFDQNPGQGDTDVDMLIKDIWVAEGEDDDSTLEFIAGVVGNELAEEIVKTTQF*
Ga0076948_103037213300005739Lake WaterMDLDDLISYGVQMMVSSFDKNPGQGDTDVEMLIEDIWVAEGEDEDSAAEFISGTGITPEVVSNLMKTYQFQ*
Ga0079957_1010613133300005805LakeMTLTSEQVSDLLVAHCNRVIDNMDMDDLVSYAVQMMMSSFDQNPGQGDTDVAMLIEDIWVAEGEDDDSTQEFIAGIVGDELAEEIVTTTQF*
Ga0075470_1014242413300006030AqueousFTPDSLFSHTLFPNKMTLTSEQVSDLLTAHCNRVIDNMDMDDLVSYAVQMMMSSFDQNPGQGDTDVAMLIEDIWVAEGEDDDSTQEFIAGIVGDELAEEIVTTTQF*
Ga0075471_1016205923300006641AqueousMTLTSEQVSDLLTAHCNRVIDNMDMDDLVSYAVQMMMSSFDQNPGQGDTDVAMLIEDIWVAEGEDDDSTQEFIAGIVGDELAEEIVTTTQF*
Ga0098073_1000307153300006734MarineMNLTSEQISNLCQAHCYRVIDNMDLDDLISYAVQMMYSSFDKNPGQNDTDIEMLIQDIWIAEDEDDDATSEFIAGVVGSDLADEIMKSTQF*
Ga0098073_105505623300006734MarineAPFLTMTLTTEQISDLCQAHCYRVVDNMDMDDLMSYAIQMMYQSFDKNPGNGDTDVNMLIQDIWVAEGEDDDATSEFIAGVVGNDLADEVMKNTQF*
Ga0070754_1005533543300006810AqueousMMVPSLLWLGAGTYLVIRSTEIRPISSIPTLSEAMNLTTEQISDLCQAHCYRVMSNMDHEDLMSYAIQMMYQSFDKDPGQGNTDVDMLIEDIWVAEGENDDSTGEFIAGVVGNDLAQEIMQTVQF*
Ga0075481_10002949113300006868AqueousMNLTTEQISDLCQAHCYRVMSNMDHEDLMSYAIQMMYQSFDKDPGQGNTDVDMLIEDIWVAEGEDDDSTGEFIAGVVGNDLAQEIMQTVQF*
Ga0075477_1015176813300006869AqueousIRLTSSIPTLSEAMNLTTEQISDLCQAHCYRVMSNMDHEDLMSYAIQMMYQSFDKDPGQGNTDVDMLIEDIWVAEGENDDSTGEFIAGVVGNDLAQEIMQTVQF*
Ga0103958_115354613300007212Freshwater LakeMTSLSSDEIQNLVAAHCYRVINEMDLDDLISYGVQMMVSSFDKNPGQGDTDVEMLIEDIWVAEGEDEDSAAEFISGTGITPEVVSNLMKTYQFQ*
Ga0070745_132989413300007344AqueousMNLTTEQISDLCQAHCYRVMSNMDHEDLMSYAIQMMYQSFDKDPGQGNTDVDMLIEDIWVAEGENDDSTGEFIAGVVGNDLAQEIMQTVQF*
Ga0099851_103016733300007538AqueousMGVDQIVMSLTTEQISDLCQAHCYRVIDNMDADDLFSYAVQMMYQSFDKNPGQNDTDVAMLIEDIWVAEGEDDDSTLEFIAGVVGDELADEIMKNTQF*
Ga0099851_104653153300007538AqueousMKLTTEQTQDLLTAHCYRVIDNMDADDLFSYAMQLMMQSFDKNPGQGDTDVEGLISDIWIAEDEDDDSAQEFIAGVLGNELAEEIVKTTQF*
Ga0099851_118940023300007538AqueousMNLTSEQISDLCQAHCYRVINNMNHDDLLSYAIQMMYPSFDKDPGQGNTDVEMLIQDIWVAEGEDEDSTAEFIAGVVGNDLAKEIMQTVQF*
Ga0099849_110911823300007539AqueousMNLTPEQISDLCQAHCYRVINNMNHDDLMSYAIQMMYQSFDKDPGQGNTDVDMLIQDIWVAEGEDDDSTVEFIAGVVRNDLAKEIMQTVQF*
Ga0099849_136113323300007539AqueousMKLNSEQINDLCQAHCYRVVNSMDLDSLISYAVQMMYSSFDKNPGQNDTDVEMLIQDIWIAEDEDEDSTSEFIAGVVGNDLAYEIMKSTQF*
Ga0099848_103215223300007541AqueousMNLTSEQISDLCQAHCYRVINNMNHDDLLSYAIQMMYQSFDKDPGQGNTDVEMLIQDIWVAEGEDEDSTAEFIAGVVGNDLAKEIMQTVQF*
Ga0099846_111701213300007542AqueousHCYRVVNSMDLDSLISYAVQMMYSSFDKNPGQNDTDVEMLIQDIWIAEDEDEDSTSEFIAGVVGNDLAYEIMKSTQF*
Ga0108970_1097276813300008055EstuarySFTTEPMNLTTEQTSELLQAHCYRVIDNMSSDDLFSYAMQMMIQSFDQNPGQGDTDVDMLIEDIWVAEGEDDDSAQEFIAGVVGNDLAEEIVKSTQF*
Ga0114339_105420643300008106Freshwater, PlanktonGAGGGSTLWESRTFLLMALTTEQVSELLTAHCYRVIDNMSSDDLFSYAMQMMIQSFDQNPGQSDTDIAMLIEDIWVAEGEDEDSTQEFIAGVVGNDLAEETMKTTQF*
Ga0114346_120296213300008113Freshwater, PlanktonMTLTSEQVQDLLVAHCNRVIDNMDMDDLVSYAVQMMMSSFDQNPGQGDTDVDMLIEDIWVAEGEDDDSAQEFIAGVVGNELAEEIVKTTQFYKWNKGSSTTPG
Ga0114355_123558423300008120Freshwater, PlanktonMTLSSEQVYYLLGTHCYRVIDNMDADDLFSYAMQMMMQSFDKNPGQGDTDVDMLIKDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKNTQF*
Ga0114363_108166113300008266Freshwater, PlanktonMTLSSQQVNYLLGAHCYRVIDNMDAADLFSYAMQMMMQSFDKNPGQGDTDVDMLIEDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKNTQF*
Ga0105105_1017743023300009009Freshwater SedimentAGILWESIGHRATMNLTTEQLKDLCQAHCYRVIDNMDADDLFSYAVQMMYNSFDKNFGAGDTDVAMLIEDIWVAEGEDDDNTQEFIAGVVGDELADEIVKNTQF*
Ga0114963_10000153203300009154Freshwater LakeMSNLTSEQISEILLAHCYRVIDNMNHDDLVSYAVQMMCESFYKNPGQGDTDVNMLIQDIWYAEGEDDDSTLEFVAGVVGNEIADEIMKTTQF*
Ga0105102_1068228013300009165Freshwater SedimentVAQVRLMVADGAGILWESIGHRATMNLTTEQLKDLCQAHCYRVIDNMDADDLFSYAVQMMYNSFDKNFGSGDTDVAMLIEDIWVAEGEDDDNTQEFIAGVVGDELADEIVKNTQF*
Ga0105102_1094587213300009165Freshwater SedimentVAQQWLVVADGAGILWESIGHRAIMNLTTEQLNDLCQAHCYRVIDNMDADDLFSYAVQMMYNSFDKNFGAGDTDVAMLIEDIWVAEGEDDDNTQEFIAGVVGDELADEIVKNTQF*
Ga0105097_1092888513300009169Freshwater SedimentVAQQWLVVADGAGILWESIGHRATMNLTTEQLNDLCQAHCYRVIDNMDADDLFSYAVQMMYNSFDKNFGAGDTDVAMLIEDIWVAEGEDDDNTQEFIAGVVGDELADEIVKNTQF*
Ga0114945_1027700643300009444Thermal SpringsDLCQAHCYRVIENMDMDDLVSYAVQMMYQSFDKNPGQNDTDVDMLIEDIWVAEGEDDDSTEEFISGIVGSELASEIVKTTQF*
Ga0127401_116921113300009469Meromictic PondMIKTNLTSEQVSDLLQAHCYRVIDNMDADDLMSYAIQMMAQSFDQNPGQGDIDVPMLIEDIWVAEGEDDDSTLEFITGVVGYDLAKEIVENTQF*
Ga0126447_101540313300009470Meromictic PondILNKSTTDTIMIKTNLTSEQVSDLLQAHCYRVIDNMDADDLMSYAILMMAQSFDQNPGQGDIDVPMLIEDIWVAEGEDDDSTLEFITGVVGYDLAKEIVENTQF*
Ga0114941_11221013300009594GroundwaterQTLMTKLLTSEQISDLCQAHCYRVIENMDMDDLVSYAVQMMYQSFDKNPGQNDTDVDMLIEDIWVAEGEDDDSTEEFISGIVGSELASEIVKTTQF*
Ga0114943_100013563300009626Thermal SpringsVIENMDMDDLVSYAVQMMYQSFDKNPGQNDTDVDMLIEDIWVAEGEDDDSTEEFISGIVGSELASEIVKTTQF*
Ga0129345_118818123300010297Freshwater To Marine Saline GradientMNLTREQISDLCQAHCYRVINNMNHDDLMSYAIQMMYQSFDKDPGQGNTDVDMLIQDIWVAEGEDDDSTVEFIAGVVRNDLAKEIMQTVQF*
Ga0129333_1006116253300010354Freshwater To Marine Saline GradientMTLTSEQVQDLLVAHCNRVIDNMDMDDLVSYAVQMMMTSFDQNPGQGDTDVDMLIEDIWVAEGEDDDSTQEFIAGVVGDDLAEEIVKTTQF*
Ga0129333_1008370363300010354Freshwater To Marine Saline GradientMNLTSEQANELLTAHCYRVIDNMNSDDLFSYAVQMMMQSFDQNPGSGDTDLEMLVEDIWVAEGEDEDSAQEFIAGVVGNDLAEEIVKSTQF*
Ga0129333_1012220743300010354Freshwater To Marine Saline GradientMTLTSEQVSDLLTAHCNRVIDNMDMDDLVSYAVQMMMSSFDQNPGQGDTDVAMLIEDIWVAEGEDDDSTQEFIAGVVGNELAEEIVTTTQF*
Ga0129333_1013053543300010354Freshwater To Marine Saline GradientMNLTTEQTSELLQAHCYRVIDNMSSDDLFSYAMQMMIQSFDQNPGQGDTDVDMLIEDIWVAEGEDDDSAQEFIAGVVGNDLAEEIVKSTQF*
Ga0129333_1019076943300010354Freshwater To Marine Saline GradientMTLTSEQVQDLLVAHCNRVIDNMDMDDLVSYAVQMMMSSFDQNPGQGDTDVDMLIEDIWVAEGEDDDSTQEFIAGVVGDELAEEIVKTTQF*
Ga0129333_1028154723300010354Freshwater To Marine Saline GradientMTLTSEQVQDLLTAHCYRVIDNMDMDDLVSYAVQLMMQSFDKDPGQGNTDFEGLIQDIWVAEGEDDDSAQEFIAGVVGNELAEEIVKTTQF*
Ga0129333_1083319723300010354Freshwater To Marine Saline GradientMEKQMTLTSEKISDLCQAHCYRVIDNMDMDDLVSYAVQMMYNSFDKNFGDGDTDLAMLIEDIWVAEGEDDDSTQQFIAGVVGDELAEQIVSQTQF*
Ga0136549_1002606963300010389Marine Methane Seep SedimentAGTYLVIRSTEIRPISSIPTLSEAMNLTTEQISDLCQAHCYRVMSNMDHEDLMSYAIQMMYQSFDKDPGRGNTDVDMLIEDIWVAEGEDDDSTGEFIAGVVGNDLAQEIMQTVQF*
Ga0151620_1000166583300011268FreshwaterMTLTSEQVSDLLSAHCYRVIDNMDADDLFSYAMQMMMESFGGKPNQVDVDMLIEDIWVAEGEDDDATQEFIAGVIGDDLAEEIVKTTQF*
Ga0119931_100527723300011984Drinking Water Treatment PlantMTLTSEQVQDLLVAHCNRVIDNMDMDDLVSYAVQMMMSSFDQNPGQGDTDVDMLIEDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKTTQF*
Ga0119951_102093823300012000FreshwaterMLHSLLQFSPEKMTLTSEQISDLCQAHCYRVIDNMDMDDLVSYAVQMMYQSFDKNPGQNDTDLDMLIEDIWVAEGEDDDATQEFIAGVVGNDLAEEIVKTTQF*
Ga0129334_1025930133300012471AqueousMTLSSQQVNYLLGAHCYRVIDNMDSDDLFSYAMQMMMQSFDKNPGQGDTDVDMLIEDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKNTQF*
Ga0129338_1292233253300012970AqueousMTLSSQQVNYLLGAHCYRVIDNMDSDDLFSYAMQMMMQSFDKNPGQGDTDVDMLIEDIWVADGEDDDSTQEFIAGVVGNELAEEIVKNTQF*
(restricted) Ga0172363_1071854913300013130SedimentMTQLTSYQISDLVQAHCYRVIDNMDADDLMSFAIQMMVQSFDQNPGQGDTDVPMLIEDIWVAEGEDDDSTLEFIAEVVGNDLADEIMKTTQF*
(restricted) Ga0172362_1079857213300013133SedimentMTVTMSLTPEQVSDLVHAHCYRVIDNMNADDLMSYAIQMMVQSFDENPGQGDTNVEMLIEDIWIAERGDDDATSEFIAGVVGNDLADEIMKTIQF*
Ga0119952_109766623300014050FreshwaterMTLTSEQISDLCQAHCYRVIDNMDMDDLVSYAVQMMYQSFDKNPGQNDTDLDMLIEDIWVAEGEDDDATQEFIAGVVGNDLAEEIVKTTQF*
Ga0181343_1000673153300017766Freshwater LakeMTKLLTSEQVSNLLQDHCYRVINEMDQDDLFSYAVQMMMQSFDQNPGQGDTDVAMLIEDIWVAEGEDDDSTLEFIAGAVGDELAEEIMKTTQF
Ga0169931_1005446823300017788FreshwaterMTQLTSYQISDLVQAHCYRVIDNMDADDLMSFAIQMMVQSFDQNPGQGDTDVPMLIEDIWVAEGEDDDSTLEFIAGVVGNDLADEIMKTTQF
Ga0188882_101043513300018665Freshwater LakeLQAHCYRVIDNMDSDDLMSYAIQMMAQSFDQNPGQGDIDVPMLIEDIWVAEGEDDDSTLEFITGVVGYDLAKEIVENTQFXNWHIRHLRFALGALR
Ga0211736_1009312923300020151FreshwaterMGVDEILMPLTTEQVSDLLVAHCNRVIDAMDMDDLVSFAVVMMMQSFDQNPGQGDTDVPMLIEDIWVAEGEDDDSTQEFIAGVVGNDLAEEIVKTTQF
Ga0213858_1001107233300021356SeawaterMTLTTEQISDLCQAHCYRVVNNMDMDDLMSYAVQMMYQSFDENPGHGDTGVNELIQDIWVAEGEDDDATSEFIAEVVGNDLADEIMKNTQF
Ga0213859_1000022613300021364SeawaterMNLTTEQISDLCQAHCYRVIDNMDMDDLVSYAVQMMYQSFDKNPGNGDTDVNMLIEDIWIAEGEDDDSTEEFIAGVVGSDLADEIMKNTQF
Ga0222714_10000723313300021961Estuarine WaterMTLTSEQVSDLLVAHCNRVIDNMDMDDLVSYAVQMMMSSFDQNPGQGDTDVAMLIEDIWVAEGEDDDSTQEFIAGIVGDELAEEIVTTTQF
Ga0222714_1009053233300021961Estuarine WaterMTTLTTEQVNDLLVAHCNRVIDNMDMDDLVSYAVQMMMTSFDQNPGQGDTDVDMLIEDIWVAEGEDDDSTQEFIAGVVGDELAEEIVKTTQF
Ga0212029_102150913300022063AqueousEQVQDLLVAHCNRVIDNMDMDDLVSYAVQMMMTSFDQNPGQGDTDVDMLIEDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKTTQF
Ga0196899_109496313300022187AqueousAGTYLVIRSTEIRLTSSIPTLSEAMNLTTEQISDLCQAHCYRVMSNMDHEDLMSYAIQMMYQSFDKDPGQGNTDVDMLIEDIWVAEGENDDSTGEFIAGVVGNDLAQEIMQTVQF
Ga0196905_1005475143300022198AqueousMTTLTSEQVQDLLVAHCNRVIDNMDMDDLVSYAVQMMMTSFDQNPGQGDTDVDMLIEDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKTTQF
Ga0196905_101266173300022198AqueousMSLTTEQISDLCQAHCYRVIDNMDADDLFSYAVQMMYQSFDKNPGQNDTDVAMLIEDIWVAEGEDDDSTLEFIAGVVGDELADEIMKNTQF
Ga0196905_104881333300022198AqueousMNLTSEQISDLCQAHCYRVINNMNHDDLLSYAIQMMYPSFDKDPGQGNTDVEMLIQDIWVAEGEDEDSTAEFIAGVVGNDLAKEIMQTVQF
Ga0196901_1012507113300022200AqueousMKLTTEQTQDLLTAHCYRVIDNMDADDLFSYAMQLMMQSFDKNPGQGDTDVEGLISDIWIAEDEDDDSAQEFIAGVLGNELAEEIVKTTQF
Ga0196901_102849823300022200AqueousMGVDQIVMSLTTEQISDLCQAHCYRVIDNMDADDLFSYAVQMMYQSFDKNPGQNDTDVAMLIEDIWVAEGEDDDSTLEFIAGVVGDELADEIMKNTQF
Ga0212128_10019272133300022563Thermal SpringsVVSQDPCYITFVQHQTLMTKLLTSEQISDLCQAHCYRVIENMDMDDLVSYAVQMMYQSFDKNPGQNDTDVDMLIEDIWVAEGEDDDSTEEFISGIVGSELASEIVKTTQF
Ga0247724_101082813300024239Deep Subsurface SedimentMNLTNEQISDLCQAHCYRVINNMNHDDLISYAIQMMYTSFDKDPGQGNTDVEMLIQDIWVAEGEDDDSTSEFISGVVGNDLAQEIMQTVQF
Ga0210003_112613223300024262Deep SubsurfaceMIKTNLTSEQVSDLLQAHCYRVIDNMDSDDLMSYAIQMMAQSFDQNPGQGDIDVPMLIEDIWVAEGEDDDSTLEFITGVVGYDLAKEIVENTQF
Ga0208018_100422193300025057MarineMNLTSEQISNLCQAHCYRVIDNMDLDDLISYAVQMMYSSFDKNPGQNDTDIEMLIQDIWIAEDEDDDATSEFIAGVVGSDLADEIMKSTQF
Ga0209498_112689423300025135SedimentMTKLLTSEQISDLCQAHCYRVIENMDMDDLVSYAVQMMYQSFDKNPGQNDTDVDMLIEDIWVAEGEDDDSTEEFISGIVGSELASEIVKTTQFXNWHKGPEQDHKLLYNQHVEFN
Ga0208784_100240373300025732AqueousMTLTSEQVSDLLTAHCNRVIDNMDMDDLVSYAVQMMMSSFDQNPGQGDTDVAMLIEDIWVAEGEDDDSTQEFIAGIVGDELAEEIVTTTQF
Ga0208150_101701133300025751AqueousMMVPSLLWLGAGTYLVIRSTEIRPISSIPTLSEAMNLTTEQISDLCQAHCYRVIDNMNHDDLMSYAIQMMYQSFDKDPGQGNTDVDMLIEDIWVAEGEDDDSTGEFIAGVVGNDLAQEIMQTVQF
Ga0209497_101234233300025768Thermal SpringsVVSQDPCYITFVQHQTLMTKLLTSEQISDLCQAHCYRVIENMDMDDLVSYAVQMMYQSFDKNPGQNDTDVDMLIEDIWVAEGEDDDSTEEFISGIVGSELASEIV
Ga0208645_101041543300025853AqueousMNLTTEQISDLCQAHCYRVMSNMDHEDLMSYAIQMMYQSFDKDPGQGNTDVDMLIEDIWVAEGENDDSTGEFIAGVVGNDLAQEIMQTVQF
Ga0209704_100059853300027693Freshwater SedimentVAQVRLMVADGAGILWESIGHRATMNLTTEQLKDLCQAHCYRVIDNMDADDLFSYAVQMMYNSFDKNFGSGDTDVAMLIEDIWVAEGEDDDNTQEFIAGVVGDELADEIVKNTQF
Ga0209085_1000047663300027741Freshwater LakeMSNLTSEQISEILLAHCYRVIDNMNHDDLVSYAVQMMCESFYKNPGQGDTDVNMLIQDIWYAEGEDDDSTLEFVAGVVGNEIADEIMKTTQF
Ga0209288_1013662523300027762Freshwater SedimentMVADGAGILWESIGHRATMNLTTEQLKDLCQAHCYRVIDNMDADDLFSYAVQMMYNSFDKNFGAGDTDVAMLIEDIWVAEGEDDDNTQEFIAGVVGDELADEIVKNTQ
Ga0209770_1000061623300027769Freshwater LakeMTLTPEQISDLCQAHCYRVIENMDMDDLVSYAVQMMYQSFDKNPGQNDTDVDMLIEDIWVAEGEDDDATSEFIAGIVGSDLADEIMKTTQF
Ga0209829_1031719523300027777Freshwater LakeMSNLTSEQISEILLAHCYRVIDNMNHDDLVSYAVQMMCESFYKNPGQGDTDVNMLIQDIWYAEGEDDDSTLEFVAGVVGNEIADEIMK
Ga0119944_1000281163300029930AquaticMTLTSQQINDLATAHCYRVIDNMDADDLFSYAMQMMLQSFDKNPGQGDTDVDMLIEDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKTTQF
Ga0119944_100057083300029930AquaticMTLTSEQVSDLLTAHCNRVIDNMDMDDLVSYAVQMMMSSFDQNPGQGDTDVAMLIEDIWVAEGEDDDATQEFIAGVVGDELAEEIVTTTQF
Ga0119944_100111673300029930AquaticMNKQTTEMTLTSEQVSDLLTAHCYRVIDSMDMDDLVSYAVQLMMQSFDKDPGQGNTDVEALIQDIWIAEGEDDDSTQEFIAGVVGNELAEEIVTTIQF
Ga0119944_103584723300029930AquaticLPSRSFLIMTLTSEQVQDLLVAHCNRVIDNMDMDDLVSYAVQMMMTSFDQNPGQGDTDVDMLIEDIWVAEGEDDDSTQEFIAGVVGDDLAEEIVKTTQF
Ga0307380_1063711643300031539SoilKTNLTSEQVSDLLQAHCYRVIDNMDSDDLMSYAIQMMAQSFDQNPGQGDIDVPMLIEDIWVAEGEDDDSTLEFITGVVGYNLAKEIVENTQF
Ga0307380_1085814523300031539SoilMIKTNLTSEQVSDLLQAHCYRVIDNMDADDLMSYAIQMMAQSFDQNPGQGDTDVPMLIQDIWIAEGEDVDSTSDFIGAIVGDELAEEIMKTTQF
Ga0307379_1050838023300031565SoilMIKTNLTSEQVSDLLQAHCYRVIDNMDSDDLMSYAIQMMAQSFDQNPGQGDIDVPMLIEDIWVAEGEDDDSTLEFITGVVGYNLAKEIVENTQF
Ga0307377_1030028953300031673SoilHLMIKTNLTSEQVSDLLQAHCYRVIDNMDADDLMSYAIQMMAQSFDQNPGQGDTDVPMLIEDIWVAEGEDDDSTLEFITGVVGYDLAKEIVENTQF
Ga0315907_1008472333300031758FreshwaterMTLSSEQVYYLLGTHCYRVIDNMDADDLFSYAMQMMMQSFDKNPGQGDTDVDMLIKDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKNTQF
Ga0315900_1014783363300031787FreshwaterMTLSSQQVNYLLGAHCYRVIDNMDSDDLFSYAMQMMMQSFDKNPGQGDTDVDMLIKDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKNTQF
Ga0315904_1020317463300031951FreshwaterMTLSSEQVYYLLGAHCYRVIDNMDADDLFSYAMQMMMQSFDKNPGQGDTDVDMLIKDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKNTQF
Ga0315901_1113742123300031963FreshwaterTLSSEQVYYLLGTHCYRVIDNMDADDLFSYAMQMMMQSFDKNPGQGDTDVDMLIKDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKNTQF
Ga0315906_1006434163300032050FreshwaterMTLSSEQVHYLLGAHCYRVIDNMDADDLFSYAMQMMMQSFDKNPGQGDTDVDMLIKDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKNTQF
Ga0315902_1004637853300032093FreshwaterMALTTEQVSELLTAHCYRVIDNMSSDDLFSYAMQMMIQSFDQNPGQSDTDIAMLIEDIWVAEGEDEDSTQEFIAGVVGNDLAEETMKTTQF
Ga0315903_1107053723300032116FreshwaterTHCYRVIDNMDADDLFSYAMQMMMQSFDKNPGQGDTDVDMLIKDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKNTQF
Ga0316625_10012524553300033418SoilMTLTSEQISDLCQAHCYRVIENMDMDDLVSYAVQMMYQSFDKNPGQNDTDLDMLIEDIWVAEGEDDDATQEFIAGVVGNDLAEEIVKTTQF
Ga0334996_0000003_15703_159813300033994FreshwaterMDITTQQVSELLQAHCYRVIDNMSSDDLFSYAMQMMIQSFDQNPGQGDTDVDMLIEDIWVAEGEDEDSVQEFIAGVFGDALLAEEIVKSTQF
Ga0334996_0027684_1007_12823300033994FreshwaterMTLTSEQVSDLLTAHCNRVIDNMDMDDLVSYAVQMMMSSFDQNPGQGDTDVAMLIEDIWVAEGEDDDSTQEFIAGVVGNELAEEIVTTIQF
Ga0335019_0000360_6803_71503300034066FreshwaterVAQVRLVVADGAGILWESIGHRATMNLTTEQLKDLCQAHCYRVIDNMDADDLFSYAVQMMYNSFDKNFGAGDTDVAMLIEDIWVAEGEDDDNTQEFIAGVVGDELADVIMKNTQF
Ga0335019_0359951_491_7723300034066FreshwaterMTSTLTSDQVSDLLTAHCYRVIENMDMDDLVSYAVQMMSQSFDQNPGQGDTDVAMLIEDIWVAEGEDDDSTQEFIAGVVGNELAEEIVKTTQF
Ga0310127_191584_303_6503300034072Fracking WaterVAQVRLMVADCAGILWESIGHRATMNLTTEQLKDLCQAHCYRVIDNMDADDLFSYAVQMMYNSFDKNFGAGDTDVAMLIEDIWVAEGEDDDSTQEFIAGVVGDELADEIMKNTQF
Ga0335030_0000301_8319_85943300034103FreshwaterMTLTPEQISDLCQAHCYRVIDNMDMDDLVSYAVQMMYQSFDKNPGQNDTDVDMLIEDIWVAEGEDDDATSEFIAGIVGSDLADEIMKTTQF
Ga0335036_0246970_808_10893300034106FreshwaterMEKQMTLTSEQISDLCQAHCYRVIDNMDMDDLVSYAVQMMYQSFDKNPGQNDTDLAMLIEDIWVAEGEDDDATSEFIAGVVGNELADQIMSQT
Ga0335066_0596367_268_5553300034112FreshwaterMEKQMTLTSEQISDLCQAHCYRVIDNMDMDDLVSYAVQMMYQSFDKNPGQNDTDLDMLIEDIWVAEGEDDDATSEFIAGVVGNELADQIMSQTQF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.