Scaffold Ga0182827_10009070

Overview

Basic Information

• Taxon OID: 3300014967
• Scaffold ID: Ga0182827_10009070
• Source Dataset Name: Freshwater microbial mat microbial communities from Canadian High Arctic Lake 9K, Kuujjuarapik, Canada - Sample L9Ka
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Laval University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 896
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Microbial Mat → Microbial Mat Communities From High Arctic Lakes

Source Dataset Sampling Location

• Location Name: Kuujjuarapik
• Coordinates
  • Lat. (^o): 55.275009
  • Long. (^o): -77.758484

Associated Families

Family	Category	Number of Sequences	3D Structure?
F057960	Metagenome	135	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0182827_100090702	F057960	AGGAG	MVFGLFKKTPKLEVTFTPTIAVARELRKEVEVAGDLVIRNVGKDAELTDLETVLVAGGTRRIDLDLPATWRGARPSAAG*