Metagenome Family F057960

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F057960
Family Type	Metagenome
Number of Sequences	135
Average Sequence Length	72 residues
Representative Sequence	MFGLFKKAPKLEMAFTPRVAVARELAKEVEVAGDLVVRNAGKDAELTDLQVVLVAGGTRRIDL
Number of Associated Samples	122
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.54 %
% of genes near scaffold ends (potentially truncated)	97.78 %
% of genes from short scaffolds (< 2000 bps)	97.78 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.296 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.852 % of family members)
Environment Ontology (ENVO)	Unclassified (25.185 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.30% β-sheet: 27.47% Coil/Unstructured: 69.23%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF01451	LMWPc	89.63
PF00106	adh_short	3.70
PF13561	adh_short_C2	2.22

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	80.00 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	80.00 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	80.00 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	80.00 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	80.00 %
Unclassified	root	N/A	3.70 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002561\|JGI25384J37096_10190965	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300004114\|Ga0062593_100287336	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300004156\|Ga0062589_101203590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	725	Open in IMG/M
3300004463\|Ga0063356_101726626	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300004480\|Ga0062592_100584533	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300004633\|Ga0066395_10439276	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	742	Open in IMG/M
3300005093\|Ga0062594_100843239	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	855	Open in IMG/M
3300005176\|Ga0066679_10171531	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300005332\|Ga0066388_103924763	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	759	Open in IMG/M
3300005332\|Ga0066388_106161106	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300005340\|Ga0070689_100441373	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300005343\|Ga0070687_101457010	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300005345\|Ga0070692_10511455	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M
3300005367\|Ga0070667_101488787	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	635	Open in IMG/M
3300005445\|Ga0070708_101950209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300005455\|Ga0070663_101306348	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	640	Open in IMG/M
3300005467\|Ga0070706_101648881	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	584	Open in IMG/M
3300005468\|Ga0070707_101853070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300005536\|Ga0070697_100297306	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300005545\|Ga0070695_101508998	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005554\|Ga0066661_10614994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300005558\|Ga0066698_10965866	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300005586\|Ga0066691_10300139	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300005713\|Ga0066905_100925947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	764	Open in IMG/M
3300005713\|Ga0066905_102117339	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300005719\|Ga0068861_102505770	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300005764\|Ga0066903_101104020	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300005764\|Ga0066903_101366515	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300005764\|Ga0066903_102538183	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300005764\|Ga0066903_107546949	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300005833\|Ga0074472_10858916	Not Available	544	Open in IMG/M
3300005937\|Ga0081455_11065536	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300006846\|Ga0075430_100764579	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	796	Open in IMG/M
3300006852\|Ga0075433_11136118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	679	Open in IMG/M
3300006954\|Ga0079219_11470630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300006954\|Ga0079219_12244133	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300009012\|Ga0066710_102790468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	691	Open in IMG/M
3300009088\|Ga0099830_10946733	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	713	Open in IMG/M
3300009090\|Ga0099827_10612021	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300009100\|Ga0075418_10739461	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1061	Open in IMG/M
3300009148\|Ga0105243_13137952	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300009162\|Ga0075423_11037252	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	872	Open in IMG/M
3300009162\|Ga0075423_12864673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	528	Open in IMG/M
3300009792\|Ga0126374_11098350	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300010358\|Ga0126370_11556145	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300010359\|Ga0126376_12216233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300010361\|Ga0126378_10988152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	946	Open in IMG/M
3300010397\|Ga0134124_12110346	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	602	Open in IMG/M
3300010398\|Ga0126383_13085766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300010400\|Ga0134122_10228632	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300010403\|Ga0134123_12393552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	593	Open in IMG/M
3300012200\|Ga0137382_10085481	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2054	Open in IMG/M
3300012582\|Ga0137358_10791146	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300012927\|Ga0137416_10278801	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300012929\|Ga0137404_10177790	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300012930\|Ga0137407_11325043	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300012948\|Ga0126375_11997403	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300012971\|Ga0126369_11926478	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	679	Open in IMG/M
3300013297\|Ga0157378_10596439	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1115	Open in IMG/M
3300013308\|Ga0157375_11719935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	743	Open in IMG/M
3300014154\|Ga0134075_10379284	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	622	Open in IMG/M
3300014874\|Ga0180084_1121502	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300014967\|Ga0182827_10009070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	896	Open in IMG/M
3300015373\|Ga0132257_103648121	Not Available	560	Open in IMG/M
3300015374\|Ga0132255_105803289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300016371\|Ga0182034_10729002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	844	Open in IMG/M
3300016422\|Ga0182039_11422590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300017659\|Ga0134083_10217839	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	792	Open in IMG/M
3300017936\|Ga0187821_10062996	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300018060\|Ga0187765_10366699	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	881	Open in IMG/M
3300018468\|Ga0066662_11491611	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
(restricted) 3300021517\|Ga0224723_1020225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2744	Open in IMG/M
3300021560\|Ga0126371_11737463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	747	Open in IMG/M
3300021560\|Ga0126371_13614637	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300025271\|Ga0207666_1012869	Not Available	1170	Open in IMG/M
3300025918\|Ga0207662_10194968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1308	Open in IMG/M
3300025922\|Ga0207646_10678472	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	922	Open in IMG/M
3300025922\|Ga0207646_11458359	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300025923\|Ga0207681_10663115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	865	Open in IMG/M
3300025932\|Ga0207690_11764832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300025933\|Ga0207706_10164473	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1950	Open in IMG/M
3300025986\|Ga0207658_10390684	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300026067\|Ga0207678_10731326	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300026067\|Ga0207678_11223978	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300026088\|Ga0207641_11022076	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	824	Open in IMG/M
3300026118\|Ga0207675_100346999	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300026326\|Ga0209801_1194545	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	819	Open in IMG/M
3300026343\|Ga0209159_1139688	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300027882\|Ga0209590_10466398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	816	Open in IMG/M
3300027909\|Ga0209382_11607120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
(restricted) 3300027995\|Ga0233418_10237848	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300030336\|Ga0247826_10585663	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	854	Open in IMG/M
3300031561\|Ga0318528_10489298	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	661	Open in IMG/M
3300031640\|Ga0318555_10258035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	942	Open in IMG/M
3300031720\|Ga0307469_11310267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	688	Open in IMG/M
3300031723\|Ga0318493_10630113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	599	Open in IMG/M
3300031736\|Ga0318501_10790111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300031740\|Ga0307468_101302189	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	662	Open in IMG/M
3300031748\|Ga0318492_10479640	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300031751\|Ga0318494_10166454	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300031754\|Ga0307475_10901154	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	698	Open in IMG/M
3300031764\|Ga0318535_10458002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300031770\|Ga0318521_10976276	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300031797\|Ga0318550_10241697	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	876	Open in IMG/M
3300031820\|Ga0307473_10946927	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300031859\|Ga0318527_10158699	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	951	Open in IMG/M
3300031873\|Ga0315297_11444938	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300031893\|Ga0318536_10306262	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	806	Open in IMG/M
3300031942\|Ga0310916_10853500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	765	Open in IMG/M
3300031947\|Ga0310909_11297486	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300031954\|Ga0306926_11633749	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	738	Open in IMG/M
3300031954\|Ga0306926_11784371	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	699	Open in IMG/M
3300031962\|Ga0307479_12186957	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300031997\|Ga0315278_11276819	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	717	Open in IMG/M
3300032002\|Ga0307416_101164834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	876	Open in IMG/M
3300032059\|Ga0318533_10345014	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1084	Open in IMG/M
3300032066\|Ga0318514_10517217	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	635	Open in IMG/M
3300032163\|Ga0315281_12233796	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300032164\|Ga0315283_10605955	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1186	Open in IMG/M
3300032174\|Ga0307470_11139313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300032180\|Ga0307471_101692402	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	787	Open in IMG/M
3300032261\|Ga0306920_103219707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300032275\|Ga0315270_11196025	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300032829\|Ga0335070_11160266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	709	Open in IMG/M
3300032893\|Ga0335069_11584815	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	702	Open in IMG/M
3300033290\|Ga0318519_10327163	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	902	Open in IMG/M
3300033406\|Ga0316604_10510429	Not Available	661	Open in IMG/M
3300033412\|Ga0310810_10982149	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	725	Open in IMG/M
3300033419\|Ga0316601_101233628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	750	Open in IMG/M
3300033480\|Ga0316620_11465943	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	674	Open in IMG/M
3300033481\|Ga0316600_10768681	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300033481\|Ga0316600_11332657	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300033487\|Ga0316630_11057424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	713	Open in IMG/M
3300034819\|Ga0373958_0198555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	20.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.85%
Plants	Host-Associated → Plants	20.00%
Aquatic	Environmental → Aquatic	8.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.07%
Freshwater	Environmental → Aquatic → Freshwater	6.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.93%
Sediment	Environmental → Aquatic → Sediment	1.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.37%
Loam	Environmental → Terrestrial → Soil → Loam	14.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.67%
Lake	Environmental → Aquatic → Freshwater → Lake	5.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.19%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.48%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.48%
Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Microbial Mat	0.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.74%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.74%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.74%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300014967	Freshwater microbial mat microbial communities from Canadian High Arctic Lake 9K, Kuujjuarapik, Canada - Sample L9Ka	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021517 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Balambano_FR2_MetaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027995 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MG	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25384J37096_101909652	3300002561	Grasslands Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEVAGELVLRNLGRAAELTDLELVLIGGGTRRIDLXVPEAWRGRXRXXXLAMTPAFPLANE*
Ga0062593_1002873363	3300004114	Soil	MLGLFKSTPKLEAIFTATRAVARELAREVEVNGELVVRNAGKAAELHDLKVVLVAGGTRRIDLPL
Ga0062589_1012035902	3300004156	Soil	MLGLFKSTPKLEAIFTATRAVARELAREVEVNGELVVRNAGKAAELHDLKVVLVAGGTRRIDLPLPPEFQGTKRLPPGGELRA
Ga0063356_1000119558	3300004463	Arabidopsis Thaliana Rhizosphere	VFGLFKSAPKLEATFSPTLAVARELAREVAVEGELVVRNVGKDVELRELALV
Ga0063356_1017266261	3300004463	Arabidopsis Thaliana Rhizosphere	MLGLFKSTPKLEAIFTATRAVARELAREVEVNGELVVRNAGKAAELHDLKVVLVAGGTRRID
Ga0062592_1005845331	3300004480	Soil	MVLGLFKRKSKLEVAFTPTIAVARELRKEVEVAGDLVIRNVGSDAQLTDLETVLVAG
Ga0066395_104392762	3300004633	Tropical Forest Soil	MRLFRRAPKLAAEFRPTRAIARELKREIELAGELVLRNEARDAELADLALVFIGGGTRRIDLALPAAWHG
Ga0062594_1008432392	3300005093	Soil	MVLGLFKRKPKLEVAFTPTIAVARELRKEVEVAGDLVIRNVGSDAQLTDLETVLVAGGTRRIDLDLPLTWRGPQRIPAGGELRAAASWTVAL
Ga0066679_101715311	3300005176	Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEVAGELVLRNLGRAAELTDLELVLIGGGTRRIDLVVPEAWRGRLRLGAGGELTAAVAWKLTL
Ga0066388_1039247632	3300005332	Tropical Forest Soil	MVLGLWKKPPKLEARFTPTLAVARELKKEVEVAGDLVVRNVGKDADLSDLEVVLVAGGTRRIDLELPASWHGPQRVPAGGELRATVDWKVTLAAPMRA
Ga0066388_1061611061	3300005332	Tropical Forest Soil	MVLGLWKKPPKLEARFDPTLAIARELKKEVEVAGDLVVRNVGKDADLSDLEVVLVAGGTRRIDLELPAGWRGPQRVPAGGELRATVDWKVTLAAPMRAPA
Ga0070689_1004413731	3300005340	Switchgrass Rhizosphere	MFGFFKKAPKLEMAFTPKIAIARELAKEVEVAGELVVKNVGKDAELTALEVVLVAGGTRRIDLELPKGWQGTQRIPGGGELRA
Ga0070687_1014570101	3300005343	Switchgrass Rhizosphere	MFGFFKKAPKLEMAFTPKTAIARELAKEVEVAGELVVKNVGKDAELTALEVVLVAGGTRRIDLELPKG
Ga0070692_105114551	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MFGLFKKAPKLEMTFTPRTAVARELAKEVEVAGDLVVKNAGKDAELTALQVVLVAG
Ga0070667_1014887872	3300005367	Switchgrass Rhizosphere	MFGFFKKAPKLEMAFTPKTAIARELAKEVEVAGDLVVKNVGKDAELTALEVVLVAGGTRRIDLELPKGWQG
Ga0070708_1019502091	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MFGLFKKAPKLEMIFTPTRAVARELAKEVEVAGELVVKNLGKDVDLAQLEVVLVAGGTRR
Ga0070663_1013063481	3300005455	Corn Rhizosphere	MFGFFKKAPKLEMAFTPKIAIARELAKEVEVAGELVVKNVGKDAELTALEVVLVAGGTRRIDLELPKGWQGTQRIPGGGE
Ga0070706_1016488811	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVLGLWKKPPKLEARFAPTVAAARELKREVEVAGELVVRNVGKDAELSDLEVVLVAGGTRRIDLELPPTWRGTQRVPAGGELRATVDWKVALAAPMRA
Ga0070707_1018530701	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VVLGLFRRTPRLEALFRPTLAVARELTREIEVVGELVLRNVGRDAELTDLELVLIGGGTRRIDLVVPEAWRGRL
Ga0070697_1002973061	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VVLGLFKRTPKVEALFRPTLAVARELTREIEVVGELVLRNVGREAELTDLELVLIGGGTRRIDLAVPEAWRGRL
Ga0070695_1015089982	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MFGLFKKAPKLEMTFTPKTAVARELAKEVEVSGDLVVKNAGKDAEVGDLQVVLVAGGTRRIDLELPAAWKGAQRIPA
Ga0066661_106149941	3300005554	Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEVAGELVLRNLGRAAELTDLELVLIGGGTRRIDLAVPEAWRGR
Ga0066698_109658662	3300005558	Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEMAGELVLRNLGRAAELTDLELVLIGGGTRRIDLAVPEAWRGRLQLAAGGELTAAVAWKLTLA
Ga0066691_103001391	3300005586	Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEVAGELVLRNLGRAAELTDLELVLIGGGTRRIDL
Ga0066905_1009259471	3300005713	Tropical Forest Soil	MVLGLFKKTPKLEASFAPTVAVARELKKEVEVAGELVVRNVGGAADLSDLETVLVAGGT
Ga0066905_1021173391	3300005713	Tropical Forest Soil	MVLGLFKKTPKLEASFAPTLAVARELKKEVEVAGELVVRNVGGAADLSDLETVLVAGGT
Ga0068861_1025057702	3300005719	Switchgrass Rhizosphere	VRLFKRTPKLEAAFQPTLAVARELAKEVEVNGALTLRNTGRGAELTDLALVLVAGGTRRIDLEL
Ga0066903_1011040201	3300005764	Tropical Forest Soil	MVLGLWKKPPKLEARFTPTVAVARELKKEVEVAGELVVRNVGKDADLNDLEVVLVAGGTRRIDLELPAAWRGGHRVRAGGELRATVDWKV
Ga0066903_1013665153	3300005764	Tropical Forest Soil	MVLGLWKKPPKLEARFTPTLAVARELKKEVEVAGDLVVRNVGKDADLSDLEVVLVAGGTRRIDLELPAGWRGPQ
Ga0066903_1025381833	3300005764	Tropical Forest Soil	MLRLFKKTPKLEAVFRPTRAVARELTREIDVAGELVLRNAGRDAELADLQLVLIAGGTRRIDLTLPAAWQG
Ga0066903_1075469492	3300005764	Tropical Forest Soil	MFGLFKKAPKLEMTFTPTAAVARELAKEVHVAGELVVRNAGKDAALSDLEVVLVAGGTRRIDLELP
Ga0074472_108589161	3300005833	Sediment (Intertidal)	MFGLFKKAPKLEMTFTPRTAVARELAKEIEVAGDLVVTNVGKDAELHDLGVVLVAGGTRR
Ga0081455_110655361	3300005937	Tabebuia Heterophylla Rhizosphere	MVLGLFKKTPKLEARFAPTVAVARELKKEVEVAGELVVRNVGGAADLSDLETVLVAGGTRRIDL
Ga0075430_1007645793	3300006846	Populus Rhizosphere	MFGFFKKAPKLEMAFTPKVAIARELAKEVEVAGDLVVKNVGKDAELTALEVVL
Ga0075433_111361182	3300006852	Populus Rhizosphere	MFGLFKKPPKLAMTFTPRTAVARELAKEVEVAGDLVVKNVGKDAELTDLEVVLVAGGTRRIDLELPPTWRGSQRIPADGELRAAV
Ga0079219_114706301	3300006954	Agricultural Soil	MLGLFKRTPKLAAEFRPSRAVARELAREIDVAGELVLRNEGRDAELSDLELVFIGGGTRRID
Ga0079219_122441331	3300006954	Agricultural Soil	VLRLFRKTPKLEAVFRPTVAVARELSREVEVAGELAIRNVGRDAELSRLALVLIAGGTRRIDLTLPDA
Ga0066710_1027904681	3300009012	Grasslands Soil	VRLFRKTPKLEAAFRPTRAVARELARQVEVAGELVLRNVGRDAELADLQLVLIAGGT
Ga0099830_109467332	3300009088	Vadose Zone Soil	MLGLFKRAPKLEAAFRPTVAVARELTREVEVVGELVLRNVGRDAELTDLELVLIGGGTRRIDL
Ga0099827_106120211	3300009090	Vadose Zone Soil	MLGLFKRAPKLEAVFRPTVALARELTREVEVAGELGLRDLGRAAELTELGLVLSGGGTRRIGLAVPEA
Ga0075418_107394613	3300009100	Populus Rhizosphere	MFGFFKKAPKLEMAFTPKVAIARELAKEVEVAGELVVKNVGKDAEVSDLQVVLVAGGTRRIDLELPAGWGGTQHI
Ga0105243_131379521	3300009148	Miscanthus Rhizosphere	MLGLFKSAPKLEAIFTATRAVARELAREVEVNGELVVRNAGKAAELHDLKVVLVAGGTRRIDL
Ga0075423_110372521	3300009162	Populus Rhizosphere	MSLFRRTPKLEAAFRPTLAVARELAREVAVAGELVRRNVGRHTELDALALVLVAGGTRRIDLDLPAAWQGRVRVP
Ga0075423_128646732	3300009162	Populus Rhizosphere	MFGLFKKPPKLELTFTPRTAVARELAKEVEVAGDLVVKNAGKDAEVGDLQVVLVAGGTRR
Ga0126374_110983502	3300009792	Tropical Forest Soil	MVLGLWKKAPKLEARFTPSLAVARELKKEVEVAGELVLRNAGSAAEVSDLETVLVAGGTRRIDLELPTAWRGTQR
Ga0126370_115561452	3300010358	Tropical Forest Soil	MVLGLWKKPPKLEARFTPTLAVARELKKEVEVAGDLVVRNVGKDADLSDLEVVLVAGGTRRIDLELPAGWRGPQRVPAGGELRATVDWKVKLAAPMRAP
Ga0126376_122162332	3300010359	Tropical Forest Soil	MMLGLWKKPPKLEARFAPTLAIARELKKEVEVAGDLVVRNVGKDADLSDLEVVLVAGGTRRIDLE
Ga0126378_109881521	3300010361	Tropical Forest Soil	MVLGLWKKPPKLEARFTPTLAVARELKKEVEVAGDLVVRNVGRDADLSDLEVVLVAGGTRRIDLE
Ga0134124_121103462	3300010397	Terrestrial Soil	MFGLFKKAPKLAMTFTPRTAVARELAKEVEVGGTLVVKNEGKAADVTDL
Ga0126383_130857661	3300010398	Tropical Forest Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGGAVDVTDLETVLVAGGTRRIDLELPAAWRGTQRLAAGGELRATVDWKVPLV
Ga0134122_102286321	3300010400	Terrestrial Soil	VRFFKRTPKLEAAFQPTLAVARELAREVEVNGQLTLRNSGRDAELTDLALVLVAGGTRRIDLELPAAW
Ga0134123_123935521	3300010403	Terrestrial Soil	MFGFFKKAPKLEMAFTPKVAVARELAKEVEVAGELVVKNVGKDAELTALEVVLVAGGTRRIDLELPKGWQGTQRIPGGGELRATVAWTVKLA
Ga0137382_100854814	3300012200	Vadose Zone Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEVAGELVLRNLGRAAELTALELVLIGGGTRRIDLAVPEALRGRLRLGAGGEL
Ga0137358_107911462	3300012582	Vadose Zone Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEVAGELVLRNLGRAAELTDLELVLIGGGTRRIDLAVPEAWRGRLQLAAGGELTAA
Ga0137416_102788013	3300012927	Vadose Zone Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEVAGELVLRNLGRAAELTDLELVLIGGGTRRIDLAVP
Ga0137404_101777901	3300012929	Vadose Zone Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEVAGELVLRNLGRAAELTDLELVLIGGGTRRIDLVVPEAWRGRLRLGAGGELTAAVAWK
Ga0137407_113250431	3300012930	Vadose Zone Soil	MFGLFKKAPKLAMTFTPRTAVARELAKEVAVAGTLVVRNEGKAAELADLEVVLVAGGTRRIDIDLPDAW
Ga0126375_119974032	3300012948	Tropical Forest Soil	MVLGLWKKAPKLEARFTPSLAVARELKKEVEVAGELVLRNAGSAAEVSDLETVLVAG
Ga0126369_119264782	3300012971	Tropical Forest Soil	MFGLFKKPPKLAMTFTPRTAVARELAKEVEVAGTLVVANQGKAAELSDLQVVLVAGGTRRIDIELP
Ga0157378_105964391	3300013297	Miscanthus Rhizosphere	MFGFFKKAPKLEMAFTPKIAIARELAKEVEVAGELVVKNVGKDAELTALEVVLVAGGTRRIDLELPKGWQ
Ga0157375_117199352	3300013308	Miscanthus Rhizosphere	MFGLFKKAPKLEMTFTPRTAVARELAKEVEVAGDLVVKNAGKDAELTALQVVLVAGGTRRIDLEL
Ga0134075_103792842	3300014154	Grasslands Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEVAGELVLRNLGRAAELTALELVLIGGGTRRIDLAVPEALRGRLRLGVGGELTAAVAWKLTLAAPMRAPA
Ga0180084_11215022	3300014874	Soil	MVLGLFKKTPKLEAKFAPTLAVARELKKEVAVAGELVVRNLGGAADLSDLETVLVAGGTRRIDLELPAAWRGAQRIPPGGELRATVAW
Ga0182827_100090702	3300014967	Microbial Mat	MVFGLFKKTPKLEVTFTPTIAVARELRKEVEVAGDLVIRNVGKDAELTDLETVLVAGGTRRIDLDLPATWRGARPSAAG*
Ga0132257_1036481212	3300015373	Arabidopsis Rhizosphere	MTMFGLFKSTPKLEATFTPTLAVARELAREVEVNGELVVRNAGKAVELHDLQVVLVAGGTRR
Ga0132255_1058032891	3300015374	Arabidopsis Rhizosphere	MFGFFKKAPKLEMAFTPKTAIARELAKEVEVAGELVVKNVGKDAELTALQVVLVAGGTRRIDLELPKGWQGTQRIPGGGELRASVAWTVK
Ga0182034_107290023	3300016371	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGGAVDVGDLETVLVAGGTRRIDLELPAAWRGTQRL
Ga0182039_114225901	3300016422	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGGAVDVGDLETVL
Ga0134083_102178393	3300017659	Grasslands Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEVAGELVLRNLGRAAELTDLELVLIGGGTR
Ga0187821_100629961	3300017936	Freshwater Sediment	MLGLFKKAPKLEASFTPALAVARELEKEIEITGELVIRNAGKDADLADLGLVLI
Ga0187765_103666991	3300018060	Tropical Peatland	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGSAVDVGDLETVL
Ga0066662_114916112	3300018468	Grasslands Soil	MLGLFRRAPKLAAVFRPTRAVARELTREIEVAGELTLRNVGKDAELCDLAVVLICGGTRRIDLELPGAWRGTVRVAAGGELRE
(restricted) Ga0224723_10202251	3300021517	Freshwater Sediment	MFGLFKRAPKLEATFAPTVAVARELAKEVEVAGELVVRNVGKAAKLTDLEVVLVAGGTRH
Ga0126371_117374633	3300021560	Tropical Forest Soil	MRLFKKTPKLEAVFRPTVAVARELSREIEVAGELVLRNVGRDAELTDLQVVLIAGGT
Ga0126371_136146371	3300021560	Tropical Forest Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGGAVDVADLETVL
Ga0207666_10128693	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MFGFFKKAPKLEMAFTPKIAIARELAKEVEVAGELVVKNVGKDAELTALEVVLVAGGTRR
Ga0207662_101949681	3300025918	Switchgrass Rhizosphere	MFGFFKKAPKLEMAFTPKTAIARELAKEVEVAGELVVKNVGKDAELTALEVVLVAGGTR
Ga0207646_106784721	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MLGFFKRAPRLEAVFRPTVAVARELTREVEVAGEFVLRNLGRAAELTDLELVLIGGGTRRIDLAVPEAWRGRLQLAAGGELTAAAWKLT
Ga0207646_114583591	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VRLFRKTPKLEAAFRPTRAVARELARQVDVAGELVLRNVGRDAELADLQLVLIAGGTRRIDLTLPEAWRARLKIPAGG
Ga0207681_106631151	3300025923	Switchgrass Rhizosphere	MFGFFKKAPKLEMAFTPKIAIARELAKEVEVAGELVVKNVGKDAELTALEVVLVAGGTRRIDLELPKGWQGTQRIPGGGEL
Ga0207690_117648322	3300025932	Corn Rhizosphere	MFGFFKKAPKLEMAFTPKIAIARELAKEVEVAGELVVKNVGKDAELTALEVVLVAGGTRRIDL
Ga0207706_101644731	3300025933	Corn Rhizosphere	MLGLFKSAPKLEAIFTATRAVARELAREVEVNGELVVRNAGKAAELHDLKVVLVAGGTRRIDLPLPPEFQGTKRLPPGGELRATVAWKIPLAAPM
Ga0207658_103906843	3300025986	Switchgrass Rhizosphere	MFGLFKSTPKLEAAFTPTRAVARELAREVEVSGELVVRNTGKAAELHDLQVVLV
Ga0207678_107313262	3300026067	Corn Rhizosphere	MFGFFKKAPKLEMAFTPKIAIARELAKEVEVAGELVVKNVGKDAELTALEVVLVAGGTRRIDLELPSGWQGTQRIPGGGELRASVAWTVKLAA
Ga0207678_112239781	3300026067	Corn Rhizosphere	MVLGLFKRKPKLEVAFTPTIAVARELRKEVEVAGDLVIRNVGSDAQLTDL
Ga0207641_110220763	3300026088	Switchgrass Rhizosphere	MVLGLFKRKPKLEVAFTPTIAVARELRKEVEVAGDLVIRNVGSDAQLTDLETVLVAGGTRRIDL
Ga0207675_1003469993	3300026118	Switchgrass Rhizosphere	MLGLFKSAPKLEAIFTATRAVARELAREVEVNGELVVRNAGKAAELHDLKVVLVAGGTRRIDLPLP
Ga0209801_11945453	3300026326	Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEVAGELVLRNLGRAAELTDLELVLIGGGTRRIDLAVPEAWRGRLHLAA
Ga0209159_11396883	3300026343	Soil	MLGLFKRAPKLAAVFRPSLAVARELTREVEVAGELVLRNLGRAAELTDLELVLIGGGTRR
Ga0209590_104663981	3300027882	Vadose Zone Soil	MLGLFKRAPKLEAVFRPTVAVARELTREVEVAGELVLRNLGRAAELTDLELVLIGGGTRRIDLA
Ga0209382_116071202	3300027909	Populus Rhizosphere	MFGFFKKAPKLEMAFTPKVAIARELAKEVEVAGDLVVKNVGKDAELTALEVVLVAGGTRRIDLELPKGWQGTQRIPGGGELRASVAWTVKLAAPMR
(restricted) Ga0233418_102378481	3300027995	Sediment	MFGLFKSTPKLEAVFTPVQAVARELAREVEVNGELVVRNAGKETELHDLQVVLVAGSTRRIDLPLPAEFQGKRRLAAGGELRATVAWKIP
Ga0247826_105856633	3300030336	Soil	MVLGLFKRKPKLEVAFTPTIAVARELRKEVEVAGDLVIRNVGSDAQLTDLETVLVAGGTRRIDLDLP
Ga0318528_104892981	3300031561	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGGAVDVGDLETVRVAGGTRRLDLELPAAWRGTQRRAAGAELRA
Ga0318555_102580351	3300031640	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGSAVDVGDLETVLVAGGTRRIDLELPAA
Ga0307469_113102672	3300031720	Hardwood Forest Soil	MLGLFKKAPKLEATFRPTLAVARELSREIEVAGELVLRNEGRDTELTDLGLVFIGGGTRRIDLTLPEAWRG
Ga0318493_106301131	3300031723	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGGAVDVGDLETVLVAGGTRRIDLELPAAWRGTQRLAAGAELRA
Ga0318501_107901112	3300031736	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGSAVDVGDLE
Ga0307468_1013021891	3300031740	Hardwood Forest Soil	MFGLFKKAPKLAMTFTPRTAVARELAKEVEVAGTLVVKNEGKTADVTDLEVVLVAGGTRRIDI
Ga0318492_104796401	3300031748	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGSAVDVGDLETVLVAGGTRRIDLELPAAWRGTQR
Ga0318494_101664541	3300031751	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGSAVDVGDLETVLVAGGTRRIDLELPAAWRGTQRLAAGAELRATVDWKVPL
Ga0307475_109011542	3300031754	Hardwood Forest Soil	MLGLFKKAPKLESSFTPALAVARELEKEIEITGELVIRNAGKDADLADLGLVLIA
Ga0318535_104580021	3300031764	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGGAVDVGDLETVLVAGGTRRIDLELPAAWRGTQRLAAGAELRAT
Ga0318521_109762761	3300031770	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGSAVDVGDLETVLVAGGTRRIDLELPAAWRGTQRLAAGAELRATVDW
Ga0318550_102416971	3300031797	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGSAVDVGDLETVLVAGGTRRIDLELPAAWRGTQRLAAGAELRV
Ga0307473_109469271	3300031820	Hardwood Forest Soil	VLGLFKRTPKLEARFEPRVAVGRELAKEVQVAGELVLRNAGRDVELTDLELVLVAGGTRRIDLALPEAWKRSV
Ga0318527_101586991	3300031859	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGGAVDVGGLETVLV
Ga0315297_114449381	3300031873	Sediment	MVFGLFKKTPKLEVTFTPTIAVARELRKEVEVAGDLVIRNVGKDAALTDLETVLV
Ga0318536_103062623	3300031893	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGGAVDVGDLETVLVAGG
Ga0310916_108535001	3300031942	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGGAVDVGDLETVLVAGGTRRIDLELPAAWRGTQRLAAGAELRVTVDWKVPLAAPMRAPAAE
Ga0310909_112974862	3300031947	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGSAVDVGDLETVLVAGGTRRIDLELPAAWRGMQRLAAGAELRAT
Ga0306926_116337492	3300031954	Soil	MVLGLFKKTPKLEVRFAPSLAVARELKKEVEVAGELVLRNVGSAVDVGDLETVLVAGGTRRIDLELPAAWRGMQRLAAG
Ga0306926_117843711	3300031954	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGGAVDVGDLE
Ga0307479_121869572	3300031962	Hardwood Forest Soil	VLGLFKRTPRLEATFRPTLAVARELTREVEVTGELVLRNLGRAAELTDLELVLIGGGTRR
Ga0315278_112768192	3300031997	Sediment	MFGLFKKAPKLEMTFTPKTAVARELAREVEVTGELVVRNLGKAAEVRDLDVVLVAGGTRRIDLDLPTAWKGTQHIPAGGELRQSVAWTVKLAAPMRAPAA
Ga0307416_1011648341	3300032002	Rhizosphere	MFGLFKKAPKLEMAFTPKTAVARELAKEVEVAGDLVVKNVGKDAELTALQVVLVAGGTRR
Ga0318533_103450143	3300032059	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGSAVDVGDLETVLVAGGTRRIDLELPAAWRGTQRLAAGAELRATVDWKV
Ga0318514_105172172	3300032066	Soil	MLGLFKRTPKLECTFTPTVAVARELAKEVAVAGELVLRNVGRDAELADLEVVLVAGGTRRIDLALPEAWRGTQHLAAGATLAATVDWTVKLAAPM
Ga0315281_122337962	3300032163	Sediment	MFGLFKKAPKLEMTFTPKTAVARELAKEVEVAGDLVVRNLGKAAEVSDLDVVLVAGGTRRIDLDLPAAWKGAQHIPAGGELRQSVAWTVKLAAPMRAPAA
Ga0315283_106059553	3300032164	Sediment	MFGLFKKAPKLEMTFTPKTAVARELAKEVEVAGDLVVRNLGKAAEVSDLDVVLVAGGTRRIDLDLPAAWKGAQ
Ga0307470_111393131	3300032174	Hardwood Forest Soil	MFGFFKKAPKLEMAFTPRTAVARELAKEVEVAGELVVKNTGKDADLTALQVVLVAGGTRRIDLELPTGWQGTQRIKGGGELRASVAWT
Ga0307471_1016924021	3300032180	Hardwood Forest Soil	MGLFKRTPKLEAVFRPTLAVAHELAREVAVSGELVLRNAGRDAELDDLALVLVAGGTRRIDLELPASWRGRVRLS
Ga0306920_1032197071	3300032261	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGGAVDVGDLET
Ga0315270_111960251	3300032275	Sediment	MFGLFKKAPKLEMTFTPKTAVARELAKEVEVAGDLVVRNLGKAAEVSDLDVVLVAG
Ga0335070_111602662	3300032829	Soil	MGLFNRAPKLECVFTPKHAVARELAKEVAVAGDLVLRNLGKDVDLTDLEVVLVAGNTRRIDLELPASWRGPQRLAAGASL
Ga0335069_115848151	3300032893	Soil	MLGLFKRAPKLECTFTPTIAVARELAKEVAVAGELVLRNAGKDAELTDLEVVLVAGGTRRIDLE
Ga0318519_103271633	3300033290	Soil	MVLGLFKKAPKLEVRFTPSLAVARELKKEVEVAGELVLRNVGSAVDVGDLETVLVAGGTRRIDLELPAAWRGTQRLAAGAELRATVDWK
Ga0316604_105104292	3300033406	Soil	MFGLWKSAPKLDAAFTPTLAVARELAREVEVNGELVVRNAGKAAELHDLKVVLVAGGTRRIDLPLPAEFSGTRKLAAGGELRATVAWKIPLAAPMR
Ga0310810_109821491	3300033412	Soil	MFGLFKKAPKLAMTFTPRTAVARELAKEVEVGGTLVVKNEGKAADVTDLEVVLVAGGTRRIDIELPGAWKGAQ
Ga0316601_1012336281	3300033419	Soil	MFGLFKKAPKLEMAFTPRVAVARELAKEVEVAGDLVVRNAGKDAELTDLQVVLVAGGTRRIDL
Ga0316620_114659431	3300033480	Soil	MFGLFKKTPKLEMTFTPRVAVARELAKEVEVAGDLVVKNAGKDAEVTDLEVVLVAGGTRRIDIELPAAWKGTRRIPAGGELRQAVAW
Ga0316600_107686811	3300033481	Soil	MFWKSAPKLEAAFTPTLAVARELAREVEVDGELVVRNVGKDAELHDLLVVLVAGGTR
Ga0316600_113326571	3300033481	Soil	MFGLFKKAPKLEMAFTPRVAVARELAKEVEVAGDLVVRNAGKDAELTDLQVVLVAGGTRRIDLELPAGWGGRQR
Ga0316630_110574241	3300033487	Soil	MFGLFKKTPKLEMTFTPRVAVARELAKEVEVAGDLVVKNAGKDAEVTDLEVVLVAG
Ga0373958_0198555_300_524	3300034819	Rhizosphere Soil	MFGFFKKAPKLEMAFTPKTAIARELAKEVEVAGDLVVKNVGKDAELTALEVVLVAGGTRRIDLELPAGWQGTQRI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters