Scaffold Ga0115997_1000432

Overview

Basic Information

• Taxon OID: 3300008940
• Scaffold ID: Ga0115997_1000432
• Source Dataset Name: Final time point T34 (2) (live) benzoate enrichments of Methanogenic microbial communities using Athabasca oil sands as inoculum DE NOVO (2)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Shell Corporation
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 6848
• Total Scaffold Genes: 14
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 8 (57.14%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified → Oil Sands → Methanogenic Incubations Using Athabaskan Oil Sands From Alberta Canada

Source Dataset Sampling Location

• Location Name: Canada: Alberta
• Coordinates
  • Lat. (^o): 57.02
  • Long. (^o): -111.65

Associated Families

Family	Category	Number of Sequences	3D Structure?
F103105	Metagenome / Metatranscriptome	101	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0115997_100043210	F103105	N/A	MSTNKAAQLLGVDRKTLAKNKKMLERCSEIIGDKSKVIRDRLLKELKII*