Scaffold M2t2BS2_10184769

Overview

Basic Information

• Taxon OID: 3300002144
• Scaffold ID: M2t2BS2_10184769
• Source Dataset Name: Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS2 (113f)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5027
• Total Scaffold Genes: 23
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 10 (43.48%)
• Novel Protein Genes: 4
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (50.00%)
• Associated Families: 4

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location

• Location Name: Baltic Sea
• Coordinates
  • Lat. (^o): 57.305
  • Long. (^o): 20.0745

Associated Families

Family	Category	Number of Sequences	3D Structure?
F013631	Metagenome / Metatranscriptome	269	Y
F034907	Metagenome / Metatranscriptome	173	Y
F053990	Metagenome / Metatranscriptome	140	Y
F105024	Metagenome / Metatranscriptome	100	Y

Sequences

Protein ID	Family	RBS	Sequence
M2t2BS2_101847691	F034907	N/A	MITLAIGGGIITLFSILFYLEDRDGVGIYDPDPSASYRHNQKRKN
M2t2BS2_1018476916	F053990	GGAGG	MINTFSLHDDYENFAQKFLGVDYEDYVSLQLGLPDEDEIEIEYLMGV*
M2t2BS2_101847692	F013631	N/A	MHIMIFHYTTNWREGLVNQMWIQEIEESHDVYKYVAIAYNPEKNVSMVMSNPRGYYDTLQWVRKFCGSFCIL*
M2t2BS2_101847695	F105024	GGAGG	MSKTETSWIDELIKWENAHPEYEPFKEDNNSQRQQNLKENY*