NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105024

Metagenome / Metatranscriptome Family F105024

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105024
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 41 residues
Representative Sequence KTETSWIDELIKWENAHPEYKPFKEDKDSQRQQNLKENY
Number of Associated Samples 73
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 35.00 %
% of genes near scaffold ends (potentially truncated) 16.00 %
% of genes from short scaffolds (< 2000 bps) 64.00 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Duplodnaviria (42.000 % of family members)
NCBI Taxonomy ID 2731341
Taxonomy All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(17.000 % of family members)
Environment Ontology (ENVO) Unclassified
(27.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(40.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.87%    β-sheet: 0.00%    Coil/Unstructured: 73.13%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01555N6_N4_Mtase 9.00
PF13392HNH_3 4.00
PF07460NUMOD3 2.00
PF04851ResIII 2.00
PF05433Rick_17kDa_Anti 2.00
PF00145DNA_methylase 1.00
PF07275ArdA 1.00
PF01145Band_7 1.00
PF14236DUF4338 1.00
PF07230Portal_Gp20 1.00
PF02384N6_Mtase 1.00
PF02086MethyltransfD12 1.00
PF00383dCMP_cyt_deam_1 1.00
PF12705PDDEXK_1 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0863DNA modification methylaseReplication, recombination and repair [L] 9.00
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 9.00
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 9.00
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 1.00
COG0338DNA-adenine methylaseReplication, recombination and repair [L] 1.00
COG3392Adenine-specific DNA methylaseReplication, recombination and repair [L] 1.00
COG4734Antirestriction protein ArdADefense mechanisms [V] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms84.00 %
UnclassifiedrootN/A16.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000126|BS_KBB_SWE26_205mDRAFT_c1063675All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05584Open in IMG/M
3300002144|M2t2BS2_10184769All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5027Open in IMG/M
3300005581|Ga0049081_10042856All Organisms → Viruses → Predicted Viral1718Open in IMG/M
3300005582|Ga0049080_10011972All Organisms → Viruses → Predicted Viral3007Open in IMG/M
3300005805|Ga0079957_1048142All Organisms → Viruses → Predicted Viral2634Open in IMG/M
3300005805|Ga0079957_1064105All Organisms → Viruses → Predicted Viral2160Open in IMG/M
3300005940|Ga0073913_10006033All Organisms → Viruses → Predicted Viral1591Open in IMG/M
3300005941|Ga0070743_10003434Not Available5851Open in IMG/M
3300006030|Ga0075470_10010711All Organisms → Viruses → Predicted Viral2827Open in IMG/M
3300006030|Ga0075470_10070896All Organisms → Viruses → Predicted Viral1058Open in IMG/M
3300006641|Ga0075471_10091944Not Available1634Open in IMG/M
3300006919|Ga0070746_10543807All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05504Open in IMG/M
3300007165|Ga0079302_1029595All Organisms → Viruses → Predicted Viral1336Open in IMG/M
3300007538|Ga0099851_1140848All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes902Open in IMG/M
3300007538|Ga0099851_1196801All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05735Open in IMG/M
3300007539|Ga0099849_1031699All Organisms → Viruses → Predicted Viral2260Open in IMG/M
3300007541|Ga0099848_1000273Not Available23121Open in IMG/M
3300007542|Ga0099846_1061390All Organisms → Viruses → Predicted Viral1414Open in IMG/M
3300007544|Ga0102861_1000809Not Available6610Open in IMG/M
3300007544|Ga0102861_1001161All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5515Open in IMG/M
3300008110|Ga0114343_1188851All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae610Open in IMG/M
3300008113|Ga0114346_1019301All Organisms → Viruses → Predicted Viral3690Open in IMG/M
3300008262|Ga0114337_1000103All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae109541Open in IMG/M
3300009001|Ga0102963_1202035All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05792Open in IMG/M
3300009075|Ga0105090_10188442All Organisms → Viruses → Predicted Viral1280Open in IMG/M
3300009081|Ga0105098_10736975Not Available526Open in IMG/M
3300009085|Ga0105103_10012559All Organisms → Viruses → Predicted Viral4107Open in IMG/M
3300009149|Ga0114918_10013907All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM016289Open in IMG/M
3300009149|Ga0114918_10031430All Organisms → Viruses → Predicted Viral3785Open in IMG/M
3300009149|Ga0114918_10108486All Organisms → Viruses → Predicted Viral1712Open in IMG/M
3300009149|Ga0114918_10153137All Organisms → Viruses → Predicted Viral1374Open in IMG/M
3300009149|Ga0114918_10198418All Organisms → Viruses → Predicted Viral1167Open in IMG/M
3300009149|Ga0114918_10468737All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05678Open in IMG/M
3300009149|Ga0114918_10601191All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05582Open in IMG/M
3300009152|Ga0114980_10134264All Organisms → Viruses → Predicted Viral1470Open in IMG/M
3300009159|Ga0114978_10227328All Organisms → Viruses → Predicted Viral1168Open in IMG/M
3300009450|Ga0127391_1005486All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Atlauavirus2800Open in IMG/M
3300009450|Ga0127391_1036177All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05985Open in IMG/M
3300009451|Ga0127402_1006962All Organisms → Viruses → Predicted Viral3252Open in IMG/M
3300009469|Ga0127401_1017986All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2075Open in IMG/M
3300009470|Ga0126447_1091289All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05743Open in IMG/M
3300009480|Ga0127405_1046013All Organisms → Viruses → Predicted Viral1111Open in IMG/M
3300009504|Ga0114946_10341202All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae784Open in IMG/M
3300010297|Ga0129345_1259932All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05606Open in IMG/M
3300010297|Ga0129345_1293161Not Available564Open in IMG/M
3300010297|Ga0129345_1310761All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05545Open in IMG/M
3300010300|Ga0129351_1180585All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05824Open in IMG/M
3300010354|Ga0129333_10565317All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05990Open in IMG/M
3300011268|Ga0151620_1061720All Organisms → Viruses → Predicted Viral1219Open in IMG/M
3300018610|Ga0188884_1011090All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05591Open in IMG/M
3300018682|Ga0188851_1030540Not Available595Open in IMG/M
3300019096|Ga0188835_1007928All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae961Open in IMG/M
3300019122|Ga0188839_1022121Not Available655Open in IMG/M
3300020141|Ga0211732_1261956All Organisms → Viruses → Predicted Viral1562Open in IMG/M
3300020141|Ga0211732_1289246All Organisms → Viruses → Predicted Viral2579Open in IMG/M
3300020141|Ga0211732_1461415All Organisms → Viruses → Predicted Viral4102Open in IMG/M
3300020151|Ga0211736_10058195All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes7435Open in IMG/M
3300020151|Ga0211736_10455373All Organisms → Viruses → Predicted Viral4249Open in IMG/M
3300020159|Ga0211734_10096730Not Available693Open in IMG/M
3300020160|Ga0211733_11224329Not Available530Open in IMG/M
3300020161|Ga0211726_10289051All Organisms → Viruses → Predicted Viral1350Open in IMG/M
3300020172|Ga0211729_10002511All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05700Open in IMG/M
3300020172|Ga0211729_10835499All Organisms → Viruses → Predicted Viral1519Open in IMG/M
3300020172|Ga0211729_11237301Not Available520Open in IMG/M
3300020205|Ga0211731_11097026All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05820Open in IMG/M
3300021373|Ga0213865_10117692All Organisms → Viruses → Predicted Viral1396Open in IMG/M
3300021373|Ga0213865_10464625All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05547Open in IMG/M
3300021425|Ga0213866_10008033All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes6613Open in IMG/M
3300021425|Ga0213866_10008417Not Available6446Open in IMG/M
3300021425|Ga0213866_10075212All Organisms → Viruses → Predicted Viral1872Open in IMG/M
3300021961|Ga0222714_10617023All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05539Open in IMG/M
3300022198|Ga0196905_1151293All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes597Open in IMG/M
3300024262|Ga0210003_1005813All Organisms → cellular organisms → Bacteria9367Open in IMG/M
3300024262|Ga0210003_1008206Not Available7513Open in IMG/M
3300024262|Ga0210003_1243964All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05713Open in IMG/M
3300024346|Ga0244775_10000481All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes49235Open in IMG/M
3300025585|Ga0208546_1028332All Organisms → Viruses → Predicted Viral1386Open in IMG/M
3300025585|Ga0208546_1135567All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Synechococcus phage S-CBM2532Open in IMG/M
3300025646|Ga0208161_1005424All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae5862Open in IMG/M
3300025674|Ga0208162_1025786All Organisms → Viruses → Predicted Viral2203Open in IMG/M
3300025732|Ga0208784_1000023All Organisms → Viruses65833Open in IMG/M
3300025732|Ga0208784_1001300Not Available10588Open in IMG/M
3300025889|Ga0208644_1307976All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae625Open in IMG/M
3300027114|Ga0208009_1055566All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05726Open in IMG/M
3300027205|Ga0208926_1000411All Organisms → cellular organisms → Bacteria7679Open in IMG/M
3300027205|Ga0208926_1001817All Organisms → Viruses → Predicted Viral3124Open in IMG/M
3300027224|Ga0208164_1025600All Organisms → Viruses → Predicted Viral1096Open in IMG/M
3300027675|Ga0209077_1054520All Organisms → Viruses → Predicted Viral1094Open in IMG/M
3300027763|Ga0209088_10027545All Organisms → Viruses → Predicted Viral2883Open in IMG/M
3300027940|Ga0209893_1005919Not Available856Open in IMG/M
3300027972|Ga0209079_10010959All Organisms → Viruses → Predicted Viral3021Open in IMG/M
3300027975|Ga0209391_10407485All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05521Open in IMG/M
3300031746|Ga0315293_10698325All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05755Open in IMG/M
3300031746|Ga0315293_11268385All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05508Open in IMG/M
3300031951|Ga0315904_10068982All Organisms → Viruses → Predicted Viral3840Open in IMG/M
3300031999|Ga0315274_11653345All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-B05598Open in IMG/M
3300032173|Ga0315268_11373363Not Available717Open in IMG/M
3300033521|Ga0316616_103046267All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae631Open in IMG/M
3300033557|Ga0316617_101583381All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae663Open in IMG/M
3300034082|Ga0335020_0106549All Organisms → Viruses → Predicted Viral1427Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous17.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater12.00%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface10.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment6.00%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond6.00%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater5.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient5.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine5.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake4.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment4.00%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton3.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.00%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic2.00%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake2.00%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine2.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.00%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand2.00%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface2.00%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.00%
MarineEnvironmental → Aquatic → Marine → Wetlands → Sediment → Marine1.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.00%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.00%
MarineEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000126Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBB sample SWE 26_20.5mEnvironmentalOpen in IMG/M
3300002144Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS2 (113f)EnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300005940Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006030Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007165Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007544Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3EnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008262Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NAEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009075Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009450Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 4m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009451Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 8m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009469Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 6m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009470Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, surface; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009480Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 10m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009504Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep SedimentEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300011268Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555EnvironmentalOpen in IMG/M
3300018610Metatranscriptome of marine microbial communities from Baltic Sea - LD35M_ls2EnvironmentalOpen in IMG/M
3300018682Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1EnvironmentalOpen in IMG/M
3300019096Metatranscriptome of marine microbial communities from Baltic Sea - GS676_0p1EnvironmentalOpen in IMG/M
3300019122Metatranscriptome of marine microbial communities from Baltic Sea - GS677_0p1EnvironmentalOpen in IMG/M
3300020141Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025585Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025732Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027114Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)EnvironmentalOpen in IMG/M
3300027205Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027224Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027675Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027940Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T3_25-Nov-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027972Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027975Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300034082Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
BS_KBB_SWE26_205mDRAFT_106367513300000126MarineMSKTNTKSSWIDELIKWENAHPEYKPFKEDKDSQRQQNSKENY*
M2t2BS2_1018476953300002144MarineMSKTETSWIDELIKWENAHPEYEPFKEDNNSQRQQNLKENY*
Ga0049081_1004285643300005581Freshwater LenticMDDSWIDELIKWENAHPEYEPFKEDKDSQRQENTKENY*
Ga0049080_1001197253300005582Freshwater LenticMDDSWIDELIKWENAHPEYEPFKEDKDSQREQNTKENY*
Ga0079957_104814293300005805LakeMMKTETSWIDELIKWENAHPEYKPFQEDKDSQRQQNLKENY*
Ga0079957_106410563300005805LakeMKNETSWIDELIKWENAHPEYKPFQEDKDSQRQQNLKENY*
Ga0073913_1000603333300005940SandMDKTETSWIDELIRWENSHPEYKPFKEDSDSQRQLNSQENY*
Ga0070743_1000343423300005941EstuarineMTSPSTDKQSSWIDELIRWENSHPEYKPFKEDKDSQRQENLKENF*
Ga0075470_10010711103300006030AqueousMKTNSNSSWIDELIKWENAHPEYQPFEEDENSQRRQNQKEDY*
Ga0075470_1007089653300006030AqueousMKKTNSNSSWIDELIKWENAHPEYKPFKEDEDSQRRQNQKETY*
Ga0075471_1009194443300006641AqueousMNTQPKEQSSWIDELIKWENAHPEHKPFKEDNNSQRQQNLKETY*
Ga0070746_1054380713300006919AqueousMSKTETSWIDELIKWENAHPEYKPFKEDKDSQRQQNLKENY*
Ga0079302_102959543300007165Deep SubsurfaceMDDSWIDELIKWENAHPEYEPFKEDKDSQRQENLKENF*
Ga0099851_114084813300007538AqueousMTTKSNQNTSWTEELMKWYNTHPEYKPFTEDKDSQRQQNQKETY*
Ga0099851_119680133300007538AqueousMTDSWIDELIKWENAHPEYEPFKEDNDSQRQENLKENY*
Ga0099849_103169923300007539AqueousMSKTNSKSSWIDELIKWENAHPEYKPFKEDKDSQRQQNLKENY*
Ga0099848_1000273223300007541AqueousMKQQKPSQSSWIDELIRWENAHPEYKPFKEDSDSQRQQNLKETY*
Ga0099846_106139023300007542AqueousMYKTETSWIDELIKWENAHPEYKPFKEDKDSQRQQNLKENY*
Ga0102861_100080933300007544EstuarineMKNETSWIDELIKWENAHPEYEPFKEDKDSQRQQNTKENY*
Ga0102861_100116133300007544EstuarineMDDSWIDELIKWENAHPEYEPFKEDKDSQRQENLKENY*
Ga0114343_118885133300008110Freshwater, PlanktonMTKTNSNSSWIDELIKWENAHPEYKPFKEDKDSQRQQNQKETY*
Ga0114346_101930193300008113Freshwater, PlanktonMKTNSNSSWIDELIKWENAHPEYKPFKEDEDSQRQQNQKEDY*
Ga0114337_10001031333300008262Freshwater, PlanktonMNTQPKSQSSWIDELIRWENAHPEYKPFREDEDSQRRQNTKENY*
Ga0102963_120203543300009001Pond WaterMSKTETSWIDELIKWENAHPEYKPFKEDKDSQRQQNL
Ga0105090_1018844243300009075Freshwater SedimentMMKTKTSWIDELIKWENAHPEYKPFKENKDSQRQQNTKENY*
Ga0105098_1073697523300009081Freshwater SedimentMMKTKTSWIDELIKWENAHPEYQPFEEDKDSQRRQNLKENY*
Ga0105103_1001255943300009085Freshwater SedimentMMKTKTSWIDELIKWENAHPEYKPFKEDKDSQRQQNTKENY*
Ga0114918_1001390783300009149Deep SubsurfaceMKNETSWIDELIKWENAHPEYEPFKEDKDSQRQENTKENY*
Ga0114918_1003143043300009149Deep SubsurfaceMDDSWIDELIKWENAHPEYEPFKEDKDSQRQENAKENY*
Ga0114918_1010848663300009149Deep SubsurfaceMSKTESSWIDELIKWENAHPEYKPFKEDKDSQRQQN
Ga0114918_1015313723300009149Deep SubsurfaceMTQKQSKSSWIDELIKWENAHPEYKPFKEDKDSQRQQNLKENY*
Ga0114918_1019841833300009149Deep SubsurfaceMTSPSTDKQSSWIDELIKWENSHPEYKPFKEDKDSQRQQNLKENF*
Ga0114918_1046873723300009149Deep SubsurfaceMTSPSTDKQSSWIDELIKWENAHPEYKPFKEDKDSQRQQNLKENF*
Ga0114918_1060119133300009149Deep SubsurfaceSTELPMDDSWIDELIKWENAHPEYEPFKEDKDSQREENTKENY*
Ga0114980_1013426453300009152Freshwater LakeMTSSSIDKQSSWIDELIKWENTHPEYKPFKEDNDSQHQQNQKENY*
Ga0114978_1022732813300009159Freshwater LakeMTSSSIDKQSSWIDELIKWENTHPEYKPFKEDNDSQRQQNQKENY*
Ga0127391_100548643300009450Meromictic PondMSKTESSWIDELIKWENAHPEYKPFKEDKDSQRQQNSKENY*
Ga0127391_103617713300009450Meromictic PondMDNSWIDELIKWENAHPEYEPFKEDNDSQRQENLKENY*
Ga0127402_100696273300009451Meromictic PondMTSPSTNKQSSWIDELIRWENSHPEYKPFKEDKDSQRQENLKENF*
Ga0127401_101798623300009469Meromictic PondMKTNSNSSWVDELIKWENAHPEYKPFKEDNNSQRQQNLKENY*
Ga0126447_109128933300009470Meromictic PondMTHKELPSWIDELIRWENSHPEYKPFKEDKDSQRQENLKENF*
Ga0127405_104601323300009480Meromictic PondMTDSWIDELIKWENAHPEYEPFKEDKDSQRQENLKENY*
Ga0114946_1034120223300009504SedimentMTSKQSSWIDELIKWENAHPEYKPFKEDKDSQRQQNIKEKF*
Ga0129345_125993213300010297Freshwater To Marine Saline GradientMNTQPMTSSSTDKQSSWIDELIKWENAHPEYKPFKEDKDSQRQ
Ga0129345_129316123300010297Freshwater To Marine Saline GradientMSKTETSWIDELIKWENAHPEYEPFKEDKDSQRQQNLKENY*
Ga0129345_131076123300010297Freshwater To Marine Saline GradientWIDELIKWENAHPEYEPFKEDNDSQRQENLKENY*
Ga0129351_118058543300010300Freshwater To Marine Saline GradientSWIDELIKWENAHPEYEPFKEDKDSQRQENLKENY*
Ga0129333_1056531753300010354Freshwater To Marine Saline GradientMNTQPKSQSSWIDELIKWENAHPEYKPFKEDEDSQRRQNTKENY*
Ga0151620_106172053300011268FreshwaterMSKTETSWIDELIKWENSHPEYEPFKEDKDSQRQQ
Ga0188884_101109023300018610Freshwater LakeMDDSWIDELIKWENAHPEYEPFKEDKDSQREENTKENY
Ga0188851_103054023300018682Freshwater LakeMKTETSWIDELIKWENAHPEYKPFQEDKDSQRQQNTKENY
Ga0188835_100792833300019096Freshwater LakeMKTETSWIDELIKWENAHPEYKPFKEDKDSQRQLNTKENY
Ga0188839_102212113300019122Freshwater LakeMKTETSWIDELIKWENAHPEYQPFQEDKDSQRQQNTKENY
Ga0211732_126195623300020141FreshwaterMSKTETSWIDELIKWENAHPEYKPFKEDKDSQRQQNLKENY
Ga0211732_128924643300020141FreshwaterMKTQSKTETSWIDELIKWENAHPEYKPFQEDKDSQRQQNFKENY
Ga0211732_146141523300020141FreshwaterMMKTKTSWIDELIKWENAHPEYKPFQEDKDSQRQQNTKDKY
Ga0211736_1005819523300020151FreshwaterMTDSWIDELIKWENAHPEYEPFKEDKDSQREQNTKENY
Ga0211736_10455373133300020151FreshwaterMAIETSWIDELIKWENAHPEYKPFQEDKDSQRQQNTKENY
Ga0211734_1009673023300020159FreshwaterMTDSWIDELIKWENAHPEYKPFQEDKDSQRQQNFKENY
Ga0211733_1122432923300020160FreshwaterSVRVTEMKTQSKTETSWIDELIKWENAHPEYKPFQEDKDSQRQQNFKENY
Ga0211726_1028905133300020161FreshwaterMMKTKTSWIDELIKWENAHPEYKPFQEDKDSQRQQNTKD
Ga0211729_1000251133300020172FreshwaterMNDSWIDELIKWENAHPEYEPFKEDKDSQREQNTKENY
Ga0211729_1083549923300020172FreshwaterMNTKSKTKSSWIDELIKWENAHPEYEPFKEDKDSQRQQNSKENY
Ga0211729_1123730113300020172FreshwaterMKTKSSWIDELIKWENAHPEYKPFKEDKNSQRQQNTKENY
Ga0211731_1109702623300020205FreshwaterMDDSWIDELIKWENAHPEYEPFKEDKDSQREQNTKENY
Ga0213865_1011769223300021373SeawaterMTDSWIDELIKWENAHPEYEPFKEDKDSQRQENLKENY
Ga0213865_1046462523300021373SeawaterMSKTNSKSSWIDELIKWENAHPEYKPFKEDKDSQRQQNLKENY
Ga0213866_1000803393300021425SeawaterMYKTETSWIDELIKWENAHPEYKPFKEDKDSQRQQNLKENY
Ga0213866_1000841713300021425SeawaterMDNSWIDELIKWENAHPEYEPFKEDNDSQRQENLKENY
Ga0213866_1007521213300021425SeawaterKTETSWIDELIKWENAHPEYKPFKEDKDSQRQQNLKENY
Ga0222714_1061702323300021961Estuarine WaterMSKTETSWIDELIKWENAHPEYKPFKEDSDSQRQQNLKETY
Ga0196905_115129313300022198AqueousMTTKSNQNTSWTEELMKWYNTHPEYKPFTEDKDSQRQQNQKETY
Ga0210003_100581353300024262Deep SubsurfaceMDDSWIDELIKWENAHPEYEPFKEDKDSQRQENAKENY
Ga0210003_100820673300024262Deep SubsurfaceMTSPSTDKQSSWIDELIKWENSHPEYKPFKEDKDSQRQQNLKENF
Ga0210003_124396423300024262Deep SubsurfaceMTSPSTDKQSSWIDELIKWENAHPEYKPFKEDKDSQRQQNLKENF
Ga0244775_100004811183300024346EstuarineMTSPSTDKQSSWIDELIRWENSHPEYKPFKEDKDSQRQENLKENF
Ga0208546_102833223300025585AqueousMKTNSNSSWIDELIKWENAHPEYQPFEEDENSQRRQNQKEDY
Ga0208546_113556713300025585AqueousMKKTNSNSSWIDELIKWENAHPEYKPFKEDEDSQRRQNQKETYXLXL
Ga0208161_1005424123300025646AqueousMKQQKPSQSSWIDELIRWENAHPEYKPFKEDSDSQRQQNLKETY
Ga0208162_102578643300025674AqueousMTDSWIDELIKWENAHPEYEPFKEDNDSQRQENLKENY
Ga0208784_1000023513300025732AqueousMKKTNSNSSWIDELIKWENAHPEYKPFKEDEDSQRRQNQKETY
Ga0208784_100130073300025732AqueousMNTQPKEQSSWIDELIKWENAHPEHKPFKEDNNSQRQQNLKETY
Ga0208644_130797633300025889AqueousLQLSRMMTKTNQNSSWIDELIKWENAHPEYKPFTEDENSQRRQNQKEDY
Ga0208009_105556613300027114Deep SubsurfaceSWIDELIKWENAHPEYEPFKEDKDSQREQNLKENF
Ga0208926_1000411123300027205EstuarineMKNETSWIDELIKWENAHPEYEPFKEDKDSQRQQNTKENY
Ga0208926_100181773300027205EstuarineMDDSWIDELIKWENAHPEYEPFKEDKDSQRQENLKENY
Ga0208164_102560013300027224EstuarineRTPPMDDSWIDELIKWENAHPEYEPFKEDKDSQRQENLKENY
Ga0209077_105452033300027675Freshwater SedimentMKTKTSWIDELIKWENAHPEYKPFKEDKDSQRQQNTKENY
Ga0209088_1002754573300027763Freshwater LakeMTSSSIDKQSSWIDELIKWENTHPEYKPFKEDNDSQRQQNQKENY
Ga0209893_100591913300027940SandMDKTETSWIDELIRWENSHPEYKPFKEDSDSQRQLNSQENY
Ga0209079_1001095923300027972Freshwater SedimentMMKTKTSWIDELIKWENAHPEYKPFKEDKDSQRQQNTKENY
Ga0209391_1040748513300027975Freshwater SedimentRSHSQTAASGGMMKTKTSWIDELIKWENAHPEYKPFKENKDSQRQQNTKENY
Ga0315293_1069832513300031746SedimentNVLGQEDWVNELVKWENAHPEYTPFQEDKDSQRQQNTKQI
Ga0315293_1126838523300031746SedimentMSKTETSWIDELIKWENAHPEYKPFKEDKDSQRQQNSKENY
Ga0315904_10068982113300031951FreshwaterMKTNSNSSWIDELIKWENAHPEYKPFKEDEDSQRQQNQKEDY
Ga0315274_1165334523300031999SedimentMTKTETSWIDELIKWENAHPEYEPFKEDKDSQRQENTKENY
Ga0315268_1137336313300032173SedimentMPIETSWIDELIKWENAHPEYKPFQEDKDSQRQQNTKENY
Ga0316616_10304626733300033521SoilMMTKTNQNSSWIDELIKWENAHPEYKPFTEDENSQRQQNQKEDY
Ga0316617_10158338133300033557SoilMKTNSNSSWIDELIKWENAHPEYKPFKEDEDSQRRQNQKEDY
Ga0335020_0106549_398_5203300034082FreshwaterMKNETSWIDELIKWENAHPEYEPFKEDKDSQRQENTKENY

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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