Scaffold RmDRAFT_ConsensusfromContig232092

Overview

Basic Information

• Taxon OID: 2075704000
• Scaffold ID: RmDRAFT_ConsensusfromContig232092
• Source Dataset Name: Bovine rumen microbial communities from Vernon, TX, USA, Sample 511
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Texas A and M University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 967
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Mammals → Digestive System → Foregut → Rumen → Bovine Rumen → Bovine Rumen Microbial Communities From Vernon, Tx, Usa

Source Dataset Sampling Location

• Location Name: Vernon, Texas
• Coordinates
  • Lat. (^o): 34.154
  • Long. (^o): -99.264

Associated Families

Family	Category	Number of Sequences	3D Structure?
F098660	Metagenome / Metatranscriptome	103	Y

Sequences

Protein ID	Family	RBS	Sequence
RmDRAFT_07324010	F098660	GGA	MAEKRNLLERIRQLALIDVLKKEDRDNIYRVCMVACDREMARLKEEK