NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F106196

Metagenome Family F106196

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F106196
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 45 residues
Representative Sequence MTEDDKNEIIKCTVSCPECGAEMVCTHEDPKHEEKHRCEKGHEWT
Number of Associated Samples 76
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 79.00 %
% of genes near scaffold ends (potentially truncated) 32.00 %
% of genes from short scaffolds (< 2000 bps) 53.00 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (51.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil
(33.000 % of family members)
Environment Ontology (ENVO) Unclassified
(59.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(68.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 20.00%    Coil/Unstructured: 80.00%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF07366SnoaL 13.00
PF12638Staygreen 12.00
PF03358FMN_red 7.00
PF06500FrsA-like 7.00
PF06736TMEM175 4.00
PF10967DUF2769 4.00
PF08818DUF1801 4.00
PF04041Glyco_hydro_130 2.00
PF13602ADH_zinc_N_2 2.00
PF02900LigB 2.00
PF08327AHSA1 1.00
PF03992ABM 1.00
PF00005ABC_tran 1.00
PF06271RDD 1.00
PF01521Fe-S_biosyn 1.00
PF04240Caroten_synth 1.00
PF01978TrmB 1.00
PF01904DUF72 1.00
PF13187Fer4_9 1.00
PF02887PK_C 1.00
PF00881Nitroreductase 1.00
PF04072LCM 1.00
PF00535Glycos_transf_2 1.00
PF14512TM1586_NiRdase 1.00
PF00903Glyoxalase 1.00
PF01661Macro 1.00
PF01569PAP2 1.00
PF01734Patatin 1.00
PF01037AsnC_trans_reg 1.00
PF00501AMP-binding 1.00
PF00579tRNA-synt_1b 1.00
PF00730HhH-GPD 1.00
PF00072Response_reg 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 4.00
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 4.00
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 4.00
COG3548Uncharacterized membrane proteinFunction unknown [S] 4.00
COG2152Predicted glycosyl hydrolase, GH43/DUF377 familyCarbohydrate transport and metabolism [G] 2.00
COG2110O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domainTranslation, ribosomal structure and biogenesis [J] 1.00
COG4841Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF familyFunction unknown [S] 1.00
COG4667Predicted phospholipase, patatin/cPLA2 familyLipid transport and metabolism [I] 1.00
COG3621Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotRGeneral function prediction only [R] 1.00
COG3315O-Methyltransferase involved in polyketide biosynthesisSecondary metabolites biosynthesis, transport and catabolism [Q] 1.00
COG2324Uncharacterized membrane proteinFunction unknown [S] 1.00
COG22313-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamilyReplication, recombination and repair [L] 1.00
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 1.00
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 1.00
COG1752Predicted acylesterase/phospholipase RssA, containd patatin domainGeneral function prediction only [R] 1.00
COG1714Uncharacterized membrane protein YckC, RDD familyFunction unknown [S] 1.00
COG1194Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairsReplication, recombination and repair [L] 1.00
COG1059Thermostable 8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 1.00
COG0469Pyruvate kinaseCarbohydrate transport and metabolism [G] 1.00
COG0316Fe-S cluster assembly iron-binding protein IscAPosttranslational modification, protein turnover, chaperones [O] 1.00
COG0180Tryptophanyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 1.00
COG0177Endonuclease IIIReplication, recombination and repair [L] 1.00
COG0162Tyrosyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A51.00 %
All OrganismsrootAll Organisms49.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2067725009|PermFrostAlaska_NODE_8264_len_7746_cov_31_669765All Organisms → cellular organisms → Archaea7796Open in IMG/M
2067725009|PermFrostAlaska_NODE_8972_len_1041_cov_31_531219All Organisms → cellular organisms → Archaea → Euryarchaeota1091Open in IMG/M
2124908032|Perma_A_C_ConsensusfromContig124929Not Available861Open in IMG/M
2124908035|B3_GZOS_CLC_ConsensusfromContig47734Not Available6768Open in IMG/M
2124908037|B3_GZBA_v_NODE_47712_len_19735_cov_18_309046Not Available19785Open in IMG/M
2140918008|ConsensusfromContig157525All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → unclassified Nitrosarchaeum → Nitrosarchaeum sp. AC22034Open in IMG/M
2140918008|ConsensusfromContig185788All Organisms → cellular organisms → Bacteria4918Open in IMG/M
2140918025|NODE_608738_length_4647_cov_22.409081All Organisms → cellular organisms → Bacteria4697Open in IMG/M
3300001869|JGI24147J20444_1044164All Organisms → cellular organisms → Archaea → Euryarchaeota909Open in IMG/M
3300002066|JGIcombinedJ21911_10008472All Organisms → cellular organisms → Archaea3741Open in IMG/M
3300002066|JGIcombinedJ21911_10008566All Organisms → cellular organisms → Bacteria3720Open in IMG/M
3300002068|JGIcombinedJ21913_10047238All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales1873Open in IMG/M
3300002068|JGIcombinedJ21913_10137802Not Available881Open in IMG/M
3300002068|JGIcombinedJ21913_10296802All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes514Open in IMG/M
3300002069|JGIcombinedJ21912_10104026All Organisms → cellular organisms → Archaea → Euryarchaeota1085Open in IMG/M
3300002069|JGIcombinedJ21912_10231161Not Available605Open in IMG/M
3300002071|JGIcombinedJ21915_10041976Not Available2021Open in IMG/M
3300002071|JGIcombinedJ21915_10059953Not Available1628Open in IMG/M
3300002071|JGIcombinedJ21915_10306625Not Available535Open in IMG/M
3300002072|JGIcombinedJ21914_10016714All Organisms → cellular organisms → Bacteria2782Open in IMG/M
3300002072|JGIcombinedJ21914_10226778Not Available502Open in IMG/M
3300002515|JGI24144J35610_10004689All Organisms → cellular organisms → Bacteria4215Open in IMG/M
3300002538|JGI24132J36420_10047459All Organisms → cellular organisms → Archaea → Euryarchaeota1388Open in IMG/M
3300002538|JGI24132J36420_10086020Not Available886Open in IMG/M
3300002549|JGI24130J36418_10016108All Organisms → cellular organisms → Archaea → Euryarchaeota2334Open in IMG/M
3300002550|JGI24131J36419_10100152Not Available720Open in IMG/M
3300002564|JGI24134J36421_10028557Not Available1725Open in IMG/M
3300002569|JGI24136J36422_10015491Not Available2415Open in IMG/M
3300002839|JGIcombinedJ43158_10011725All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobacterium → Methanobacterium paludis3701Open in IMG/M
3300002986|JGI24142J45722_1016661Not Available1986Open in IMG/M
3300003852|Ga0031655_10085023Not Available1299Open in IMG/M
3300003852|Ga0031655_10187652Not Available790Open in IMG/M
3300003852|Ga0031655_10356914Not Available544Open in IMG/M
3300005938|Ga0066795_10000885Not Available6383Open in IMG/M
3300005947|Ga0066794_10030485Not Available1580Open in IMG/M
3300006619|Ga0075529_1004224All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → unclassified Nitrosarchaeum → Nitrosarchaeum sp. AC21120Open in IMG/M
3300006795|Ga0075520_1079314Not Available1520Open in IMG/M
3300006950|Ga0075524_10156775Not Available987Open in IMG/M
3300006972|Ga0075518_1077057All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → unclassified Nitrosarchaeum → Nitrosarchaeum sp. AC2669Open in IMG/M
3300006972|Ga0075518_1109303Not Available563Open in IMG/M
3300009519|Ga0116108_1033562Not Available1685Open in IMG/M
3300009547|Ga0116136_1034659Not Available1509Open in IMG/M
3300009548|Ga0116107_1042932Not Available1586Open in IMG/M
3300009614|Ga0116104_1113493Not Available533Open in IMG/M
3300009616|Ga0116111_1003627Not Available8401Open in IMG/M
3300009630|Ga0116114_1000011All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia136255Open in IMG/M
3300009631|Ga0116115_1196837Not Available509Open in IMG/M
3300010339|Ga0074046_10263169All Organisms → cellular organisms → Eukaryota → Viridiplantae1068Open in IMG/M
3300014151|Ga0181539_1060581All Organisms → cellular organisms → Archaea1726Open in IMG/M
3300014151|Ga0181539_1066092All Organisms → cellular organisms → Archaea1625Open in IMG/M
3300014153|Ga0181527_1004910Not Available11310Open in IMG/M
3300014156|Ga0181518_10241105Not Available922Open in IMG/M
3300014158|Ga0181521_10084418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium avium2005Open in IMG/M
3300014490|Ga0182010_10003255All Organisms → cellular organisms → Bacteria → Terrabacteria group7905Open in IMG/M
3300014490|Ga0182010_10006281All Organisms → cellular organisms → Bacteria5533Open in IMG/M
3300014490|Ga0182010_10051154All Organisms → cellular organisms → Bacteria → Terrabacteria group1969Open in IMG/M
3300014494|Ga0182017_10054611Not Available2660Open in IMG/M
3300014496|Ga0182011_10010414All Organisms → cellular organisms → Bacteria → Terrabacteria group6994Open in IMG/M
3300014498|Ga0182019_10003543All Organisms → cellular organisms → Bacteria7973Open in IMG/M
3300014498|Ga0182019_10007722All Organisms → cellular organisms → Archaea5604Open in IMG/M
3300017931|Ga0187877_1003589All Organisms → cellular organisms → Bacteria12546Open in IMG/M
3300017934|Ga0187803_10435293Not Available534Open in IMG/M
3300017941|Ga0187850_10007923All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia7358Open in IMG/M
3300017961|Ga0187778_10001267Not Available17708Open in IMG/M
3300017961|Ga0187778_10106489Not Available1746Open in IMG/M
3300017966|Ga0187776_10535691Not Available806Open in IMG/M
3300017975|Ga0187782_10051546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium avium2997Open in IMG/M
3300018005|Ga0187878_1003537Not Available12812Open in IMG/M
3300018009|Ga0187884_10010755All Organisms → cellular organisms → Archaea5505Open in IMG/M
3300018013|Ga0187873_1101279All Organisms → cellular organisms → Archaea1140Open in IMG/M
3300018014|Ga0187860_1251375Not Available701Open in IMG/M
3300018029|Ga0187787_10133269Not Available828Open in IMG/M
3300018062|Ga0187784_10000037All Organisms → cellular organisms → Archaea → Euryarchaeota77430Open in IMG/M
3300018086|Ga0187769_10164204All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia1632Open in IMG/M
3300018088|Ga0187771_10199596Not Available1659Open in IMG/M
3300018088|Ga0187771_10262781Not Available1441Open in IMG/M
3300018090|Ga0187770_10017439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium avium4791Open in IMG/M
3300018090|Ga0187770_10099550All Organisms → cellular organisms → Bacteria → Terrabacteria group2168Open in IMG/M
3300018090|Ga0187770_10188754All Organisms → cellular organisms → Bacteria1584Open in IMG/M
3300019788|Ga0182028_1129103All Organisms → cellular organisms → Bacteria1726Open in IMG/M
3300021074|Ga0194044_10005285Not Available6095Open in IMG/M
3300022593|Ga0236338_1009437All Organisms → cellular organisms → Bacteria → Terrabacteria group2344Open in IMG/M
3300022830|Ga0224515_1000218All Organisms → cellular organisms → Bacteria10783Open in IMG/M
3300023088|Ga0224555_1007446Not Available7983Open in IMG/M
3300024240|Ga0224522_1000338All Organisms → cellular organisms → Archaea17350Open in IMG/M
3300025442|Ga0208034_1003318Not Available7607Open in IMG/M
3300025524|Ga0209817_1024954Not Available974Open in IMG/M
3300025524|Ga0209817_1068635Not Available584Open in IMG/M
3300025533|Ga0208584_1051971Not Available1055Open in IMG/M
3300025836|Ga0209748_1010711Not Available4170Open in IMG/M
3300025836|Ga0209748_1078778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1307Open in IMG/M
3300025864|Ga0209429_10134768All Organisms → cellular organisms → Archaea → Euryarchaeota1051Open in IMG/M
3300026365|Ga0255360_1000982All Organisms → cellular organisms → Bacteria → Terrabacteria group4865Open in IMG/M
3300027896|Ga0209777_10003107All Organisms → cellular organisms → Archaea20972Open in IMG/M
3300027900|Ga0209253_10004159Not Available12634Open in IMG/M
3300027902|Ga0209048_10172132All Organisms → cellular organisms → Bacteria1597Open in IMG/M
3300033402|Ga0326728_10027441All Organisms → cellular organisms → Archaea9963Open in IMG/M
3300033402|Ga0326728_10120331Not Available3022Open in IMG/M
3300033405|Ga0326727_10037454Not Available8238Open in IMG/M
3300034091|Ga0326724_0566441Not Available570Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil33.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland12.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland8.00%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen8.00%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment6.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil6.00%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog5.00%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil4.00%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil4.00%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil2.00%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.00%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2067725009Permafrost microbial communities from central Alaska, USA - Permafrost field sampleEnvironmentalOpen in IMG/M
2124908032Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_allEnvironmentalOpen in IMG/M
2124908035Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3EnvironmentalOpen in IMG/M
2124908037Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3EnvironmentalOpen in IMG/M
2140918008Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_allEnvironmentalOpen in IMG/M
2140918025Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3EnvironmentalOpen in IMG/M
3300001869Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-33AEnvironmentalOpen in IMG/M
3300002066Barrow Graham LP Ref core NGADG0002-211 (Barrow Graham LP Ref core NGADG0002-211,NGADG0004-311, ASSEMBLY_DATE=20131004)EnvironmentalOpen in IMG/M
3300002068Barrow Graham LP Ref core NGADG0004-212 (Barrow Graham LP Ref core NGADG0004-212,NGADG0011-311, ASSEMBLY_DATE=20131010)EnvironmentalOpen in IMG/M
3300002069Barrow Graham LP Ref core NGADG0002-212 (Barrow Graham LP Ref core NGADG0002-212,NGADG0004-211, ASSEMBLY_DATE=20131010)EnvironmentalOpen in IMG/M
3300002071Barrow Graham LP Ref core NGADG0011-312 (Barrow Graham LP Ref core NGADG0011-312,NGADG0011-212, ASSEMBLY_DATE=20131010)EnvironmentalOpen in IMG/M
3300002072Barrow Graham LP Ref core NGADG0011-211 (Barrow Graham LP Ref core NGADG0011-211,NGADG0004-312, ASSEMBLY_DATE=20131005)EnvironmentalOpen in IMG/M
3300002515Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21AEnvironmentalOpen in IMG/M
3300002538Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212EnvironmentalOpen in IMG/M
3300002549Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212EnvironmentalOpen in IMG/M
3300002550Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211EnvironmentalOpen in IMG/M
3300002564Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312EnvironmentalOpen in IMG/M
3300002569Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212EnvironmentalOpen in IMG/M
3300002839Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-31A and 11-33A (Combined assembly, ASSEMBLY_DATE=20140611)EnvironmentalOpen in IMG/M
3300002986Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-31AEnvironmentalOpen in IMG/M
3300003852Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HBEnvironmentalOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300005947Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190EnvironmentalOpen in IMG/M
3300006619Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-4BEnvironmentalOpen in IMG/M
3300006795Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-BEnvironmentalOpen in IMG/M
3300006950Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-oneEnvironmentalOpen in IMG/M
3300006972Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB136-AEnvironmentalOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009547Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40EnvironmentalOpen in IMG/M
3300009548Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100EnvironmentalOpen in IMG/M
3300009614Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150EnvironmentalOpen in IMG/M
3300009616Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100EnvironmentalOpen in IMG/M
3300009630Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40EnvironmentalOpen in IMG/M
3300009631Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300014151Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaGEnvironmentalOpen in IMG/M
3300014153Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaGEnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014496Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017941Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018005Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018014Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40EnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300019788Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300021074Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-17mEnvironmentalOpen in IMG/M
3300022593Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W2EnvironmentalOpen in IMG/M
3300022830Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T-25EnvironmentalOpen in IMG/M
3300023088Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34EnvironmentalOpen in IMG/M
3300024240Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25EnvironmentalOpen in IMG/M
3300025442Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025524Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB136-A (SPAdes)EnvironmentalOpen in IMG/M
3300025533Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025836Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025864Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)EnvironmentalOpen in IMG/M
3300026365Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T50EnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300034091Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00NEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
draft_perm_001256602067725009PermafrostMTEDDKNEIIKCTVSCPECGAEMVCTHEDPKHEEKHRCEKGHEWT
draft_perm_000363802067725009PermafrostMTEDDENETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHEWA
Perma_A_C_040617102124908032SoilMTEDDKNETIKCTISCPECGAEMVCTHEDPKHEDKHRCAKGHEWA
B3_GZOS_CLC_017105102124908035SoilMTEDDKNETIKCTVSCPECGAEMTCTHEDSKHEEKHRCEKGHEWA
B3_GZBA_v_003295702124908037SoilMTQDDKNETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHVWA
Bog_all_C_032949902140918008SoilMTEDDKNETIKCTVSCPECGAEMICTHEDPKHEEKHRCEKGHEWT
Bog_all_C_053262602140918008SoilMAEDDEQNEIIKCTVTCPECGGEIVCSHEDAKHEGKHRCEKGHEWT
b3_nosca_v_017868802140918025SoilGGTMAEDDEQNEIIKCTVTCPECGGEIVCSHEDAKHEGKHRCEKGHEWT
JGI24147J20444_104416433300001869Arctic Peat SoilMTQDDKNETIKCTVSCPECGAEMICTHEDSKHEEK
JGIcombinedJ21911_1000847213300002066Arctic Peat SoilMTEDDKNETIKCTISCPECGAEMVCTHEDPKHEDKHR
JGIcombinedJ21911_1000856613300002066Arctic Peat SoilNETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHVWA*
JGIcombinedJ21913_1004723833300002068Arctic Peat SoilENETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHEWA*
JGIcombinedJ21913_1013780233300002068Arctic Peat SoilMTEDDKNETIKCTVSCPECGAEMICTHEDSKHEEKH
JGIcombinedJ21913_1029680213300002068Arctic Peat SoilMAKDDEQNEIIKCTITCPECGGEIVCSHEDAKHEGKHRCEKGHEWT*
JGIcombinedJ21912_1010402613300002069Arctic Peat SoilMTEDDKNETIKCTISCPECGAEMVCTHEDPKHEDKH
JGIcombinedJ21912_1023116113300002069Arctic Peat SoilMTEDDENETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHVWA*
JGIcombinedJ21915_1004197623300002071Arctic Peat SoilMVEDDKHNENIKCTVSCPECCAEMVCTHEDPKHEEKHRCEKGHEWT*
JGIcombinedJ21915_1005995323300002071Arctic Peat SoilMTQDDKNETIKCTVSCPECGAEMTCTHEDSKHEEKHRCEKGHEWA*
JGIcombinedJ21915_1030662523300002071Arctic Peat SoilMTEDDENETIKCTVSCPECGAEMICTHEDSKHEEK
JGIcombinedJ21914_1001671413300002072Arctic Peat SoilDDKNETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHVWA*
JGIcombinedJ21914_1022677813300002072Arctic Peat SoilNETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHEWA*
JGI24144J35610_1000468933300002515Arctic Peat SoilMTEDDENETIKCTVSCPECGAEMICTHEDSKHEEKXRCEKGHVWA*
JGI24132J36420_1004745933300002538Arctic Peat SoilMTEDDENETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHEWA*
JGI24132J36420_1008602033300002538Arctic Peat SoilDKNETIKCTISCPECGAEMVCTHEDPKHEDKHRCAKGHEWA*
JGI24130J36418_1001610833300002549Arctic Peat SoilMTEDDKNETIKCTISCPECGAEMVCTHEDPKHEDKHRCAKGHEWA*
JGI24131J36419_1010015223300002550Arctic Peat SoilMTEDDKNETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHEWA*
JGI24134J36421_1002855733300002564Arctic Peat SoilMTEDDENETIKCTVSCPECGAEMTCTHEDSKHEEKHRCEKGHEWA*
JGI24136J36422_1001549133300002569Arctic Peat SoilMVEDDKHNENIKCSVSCPECCAEMVCTHEDPKHEEKHRCEKGHEWT*
JGIcombinedJ43158_1001172553300002839Arctic Peat SoilMTEXDKNETIKCTISCPECGAEMVCTHEDPKHEDKHRCAKGHEWA*
JGI24142J45722_101666143300002986Arctic Peat SoilMTQDDKNETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHVWA*
Ga0031655_1008502323300003852Freshwater Lake SedimentMTEDDKNEIIKCTVSCPECGAEMVCTHEDPKHEEKHSCEKGHEWI*
Ga0031655_1018765223300003852Freshwater Lake SedimentMTEDDKNETIKCTISCPECGAEMVCTHEDPKHEEKHKCEKGHEWT*
Ga0031655_1035691413300003852Freshwater Lake SedimentMTEDDKDEIIKCTVSCPVCGAEMICTHEDPKHEEKHRCEKGHEWA*
Ga0066795_1000088543300005938SoilMTEDDKNETIKCTVSCPECGAEMTCTHEDSKHEEKHRCEKGHEWA*
Ga0066794_1003048533300005947SoilRCGTMTEDDKNETIKCTVSCPECGAEMTCTHEDSKHEEKHRCEKGHEWA*
Ga0075529_100422433300006619Arctic Peat SoilMTEDDKNEIIKCTVSCPECGAEMVCTHEDPKHEEKHRCEKGHEWT*
Ga0075520_107931413300006795Arctic Peat SoilRGGTMTEDDKNETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHVWA*
Ga0075524_1015677523300006950Arctic Peat SoilMTQDDKNETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHEWA*
Ga0075518_107705723300006972Arctic Peat SoilMTEDDKNEIIKCTVSCPECGAEMVCTHEDPKHEEKHRCE
Ga0075518_110930323300006972Arctic Peat SoilTRGGTMTEDDENETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHEWA*
Ga0116108_103356223300009519PeatlandMAEDDKNEIVKCTVSCPECGAEIVCSHEDPKHEGKHRCEKGHEWA*
Ga0116136_103465933300009547PeatlandMAEDDEQNEIIKCTVTCPECGGEIVCSHEDAKHEGKHRCEKGHEWT*
Ga0116107_104293233300009548PeatlandMAEDDEQNEIIKCTVMCPECGGEIVCSHEDAKHEGKHRCEKGHEWT*
Ga0116104_111349323300009614PeatlandMTEDDKDEIIKCTVSCPVCGAEMVCTHEDPKHEEKHRCEKGHEWT*
Ga0116111_1003627113300009616PeatlandMAENDEQNEIIKCTVVCPECGGEIVCSHEDAKHEGKHRCEKGHEWT*
Ga0116114_10000111573300009630PeatlandRTHSTRGETMTEDDKDEIIKCTVSCPVCGAEMVCTHEDPKHEGKHRCEKGHEWT*
Ga0116115_119683713300009631PeatlandCCTLVRTHSTRGETMTEDDKDEIIKCTVSCPVCGAEMVCTHEDPKHEGKHRCEKGHEWT*
Ga0074046_1026316913300010339Bog Forest SoilMAEDDEQNEIIKCTVVCPECGGEIVCSHEDAKHEGKHRCEKGHEWT*
Ga0181539_106058133300014151BogMVEDNEQNEIIKCTVTCPECGGEIICSHEDAKHEGKHRCEKGHEWN*
Ga0181539_106609223300014151BogMVEDDEQSEIIKCTVMCPECGGEIVCSHEDAKHEGKHRCEKGHEWT*
Ga0181527_1004910103300014153BogMTEDDKDEIIKCTVSCPVCGAEMVCTHEDPKHEGKHRCEKGHEWT*
Ga0181518_1024110513300014156BogEIIKCTVSCPVCGAEMVCTHEDPKHEGKHRCEKGHEWT*
Ga0181521_1008441823300014158BogCCTLIRTHSTRGETMTEDDKDEIIKCTVSCPVCGAEMVCTHEDPKHEGKHRCEKGHEWT*
Ga0182010_1000325593300014490FenMAEDDKQNEIIKCTVTCPECGGKIVCSHEDAKHEGKHRCEKGHEWT*
Ga0182010_1000628113300014490FenDEIIKCTVSCPVCGAEMVCTHEDPKHEGKHRCEKGHEWT*
Ga0182010_1005115423300014490FenMAEDDKQDESIKCTVTCPECGGEIVCSHEDAKHEGKHRCEKGHKWT*
Ga0182017_1005461113300014494FenEDDKDEIIKCTVSCPVCGAEMVCTHEDPKHEGKHRCEKGHEWT*
Ga0182011_1001041493300014496FenMAEDDKQHEIIKCTVTCPECGGEIVCSHEDAKHEGKHRCEKGHEWT*
Ga0182019_1000354343300014498FenMAEDDKQDESIKCTVTCPECGGEIVCSHEDAKHEGKHRCEKGHEWT*
Ga0182019_1000772213300014498FenMAEDDKQNEIIKCTVTCPECGGEIVCSHEDAKHEGKHRCEKGHEWT*
Ga0187877_1003589173300017931PeatlandMAEDDKNEIVKCTVSCPECGAEIVCSHEDPKHEGKHRCEKGHEWA
Ga0187803_1043529313300017934Freshwater SedimentMAENDEHNEIIKCTVTCPECGGEIVCSHEEAKHKGKHRCEKGH
Ga0187850_1000792363300017941PeatlandMTEDDKDEIIKCTVSCPVCGAEMVCTHEDPKHEGKHRCEKGHEWT
Ga0187778_10001267173300017961Tropical PeatlandMAEDTEHNEIIKCTVTCPECGAEMVCTHEDAQHEGKHRCEKGHEWTE
Ga0187778_1010648923300017961Tropical PeatlandMAEDEQNEVIRCTVSCPECGAEMICTHENAEHEGKHRCEKGHEWT
Ga0187776_1053569123300017966Tropical PeatlandVTENDKDEIIKCTVSCPECGAEMICTHEDPKHAGKHVCEKGHEWI
Ga0187782_1005154633300017975Tropical PeatlandMTKDDEQNESIKCTVTCPECGGEIVCCHEDAKHEGKHRCEKGHEWT
Ga0187878_1003537133300018005PeatlandMTEDDKNEIIKCTVSCPECGAEMICTHEDPKHEEKHRCEKGHEWT
Ga0187884_1001075533300018009PeatlandMVEDNEQNEIIKCTVTCPECGGEIICSHKDAKHEGKHRCEKGHEWN
Ga0187873_110127923300018013PeatlandMAEDDEQNEIIKCTVMCPECGGEIVCSHEDAKHEGKHRCEKGHEWT
Ga0187860_125137513300018014PeatlandCCTLVRTHSTRGETMTEDDKDEIIKCTVSCPVCGAEMVCTHEDPKHEGKHRCEKGHEWT
Ga0187787_1013326923300018029Tropical PeatlandMRTLRGETMAEDAEKDEIIKCTVTCPECGGEIVCTHEDAQHEGKHRCEQGHEWT
Ga0187784_10000037653300018062Tropical PeatlandMTEDNEQNGIIKCTVTCPECGGEIVCSHEDAKHEGKHRCEKGHEWT
Ga0187769_1016420423300018086Tropical PeatlandMAEDDEQNEIIKCTVVCPECGGEIVCSHEDAKHEEKHRCEKGHEWT
Ga0187771_1019959623300018088Tropical PeatlandMAEDDKQNEIIKCTVSCPVCGAEIVCSHEDPKHEEKHRCEKGHEWT
Ga0187771_1026278133300018088Tropical PeatlandMVEDDEQNEIIKCTVVCPECGGEIVCSHEDAKHEEKHRCEKGHEWT
Ga0187770_1001743943300018090Tropical PeatlandMTTGDEQDEIIKCTVTCPDCGGEIVCTHEDAKHEGKHRCEKGHEWP
Ga0187770_1009955023300018090Tropical PeatlandMVEDEVIKCTVSCPECGAEIVCTHEDAKHKGKHRCEKGHEWT
Ga0187770_1018875433300018090Tropical PeatlandMAEDDEQNETIKCTVSCPECGAEMICTHEDPKHEGKHRCEKGHEW
Ga0182028_112910343300019788FenMAEDDKQNEIIKCTVTCPECGGEIVCSHEDAKHEGKHRCEKGHEWT
Ga0194044_1000528543300021074Anoxic Zone FreshwaterMTEDDKNETIKCTISCPECGAEMVCTHEDPKHEEKHKCEKGHEWT
Ga0236338_100943733300022593FreshwaterMAEDDKQDESIKCTVTCPECGGEIVCSHEDAKHEGKHRCEKGHEWT
Ga0224515_100021873300022830SoilMAEDDKQDESIKCTVTCPECGGEIVCSHEDAKHEGKHRCEKGHKWT
Ga0224555_100744613300023088SoilDKDEIIKCTVSCPVCGAEMVCTHEDPKHEGKHRCEKGHEWT
Ga0224522_1000338193300024240SoilMAEDDKQNEIIKCTVTCPECGGKIVCSHEDAKHEGKHRCEKGHEWT
Ga0208034_1003318113300025442PeatlandMAENDEQNEIIKCTVVCPECGGEIVCSHEDAKHEGKHRCEKGHEWT
Ga0209817_102495413300025524Arctic Peat SoilMTEDDENETIKCTVSCPECGAEMICTHEDSKHEEKHRCE
Ga0209817_106863523300025524Arctic Peat SoilTRGGTMTEDDENETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHEWA
Ga0208584_105197123300025533Arctic Peat SoilMTEDDENETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHVWA
Ga0209748_101071173300025836Arctic Peat SoilMTEDDKNETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKGHVWA
Ga0209748_107877833300025836Arctic Peat SoilMAKDDEQNEIIKCTITCPECGGEIVCSHEDAKHEGKHRCEKGHEWT
Ga0209429_1013476833300025864Arctic Peat SoilMTEDDENETIKCTVSCPECGAEMICTHEDSKHEEKHRCEKG
Ga0255360_100098213300026365SoilMAEDDKQDESIKCTVTCPECGGEIVCSHEDAKHEGKHRCEKGH
Ga0209777_10003107253300027896Freshwater Lake SedimentMTEDDKNEIIKCTVSCPECGAEMVCTHEDPKHEEKHSCEKGHEWI
Ga0209253_10004159133300027900Freshwater Lake SedimentMTEVDKNEIIKCTVSCPECGAEMVCTHEDPKHEEKHRCEKGHEWI
Ga0209048_1017213233300027902Freshwater Lake SedimentMTEDDKNETIKCTVSCPECGAEMVCTHEDPKHEEKHRCEKGHE
Ga0326728_1002744173300033402Peat SoilMVEDDEQSEIIKCTVMCPECGGEIVCSHEDAKHEGKHRCEKGHEWT
Ga0326728_1012033143300033402Peat SoilMVEDDEQNEIVKCTVMCPECGGEIVCSHEDAKHEGKHRCEKGHEWT
Ga0326727_1003745443300033405Peat SoilMAEDDKNEIVKCTVSCPECGAEIVCSHEDAKHEGKHRCEKGHEWT
Ga0326724_0566441_425_5683300034091Peat SoilTMVEDDEQSEIIKCTVMCPECGGEIVCSHEDAKHEGKHRCEKGHEWT


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