 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F104619 |
| Family Type | Metagenome |
| Number of Sequences | 100 |
| Average Sequence Length | 60 residues |
| Representative Sequence | MHKAPSQIARSLRAFRNAQRLGLLRSVRISPGAHACEAARSQQGIEYMGDIVPRLPLTE |
| Number of Associated Samples | 91 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 92.31 % |
| % of genes near scaffold ends (potentially truncated) | 13.00 % |
| % of genes from short scaffolds (< 2000 bps) | 12.00 % |
| Associated GOLD sequencing projects | 91 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.52 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (97.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (29.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (47.000 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 24.14% β-sheet: 6.90% Coil/Unstructured: 68.97% | Feature Viewer |
|
|
|||||
| Powered by Feature Viewer | |||||
| Structure Viewer | |
|---|---|
|
| |
| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.52 |
| Powered by PDBe Molstar | |
| ⦗Top⦘ |
| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF00027 | cNMP_binding | 5.00 |
| PF13545 | HTH_Crp_2 | 4.00 |
| PF13467 | RHH_4 | 3.00 |
| PF09351 | DUF1993 | 2.00 |
| PF12697 | Abhydrolase_6 | 1.00 |
| PF13278 | Obsolete Pfam Family | 1.00 |
| PF00589 | Phage_integrase | 1.00 |
| PF12244 | DUF3606 | 1.00 |
| PF13473 | Cupredoxin_1 | 1.00 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 97.00 % |
| All Organisms | root | All Organisms | 3.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 11.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 8.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 6.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 5.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 5.00% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 4.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 3.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 3.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 3.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 3.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 3.00% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 2.00% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.00% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 2.00% |
| Permafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 2.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.00% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 2.00% |
| Wetland | Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland | 1.00% |
| Sediment (Intertidal) | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal) | 1.00% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.00% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.00% |
| Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.00% |
| Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland | 1.00% |
| Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 1.00% |
| Prmafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil | 1.00% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.00% |
| Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.00% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2124908007 | Soil microbial communities from sample at FACE Site Metagenome WIR_ElevOz2 | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001213 | Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly) | Environmental | Open in IMG/M |
| 3300004058 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
| 3300005161 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPA | Environmental | Open in IMG/M |
| 3300005168 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC | Environmental | Open in IMG/M |
| 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005542 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 | Environmental | Open in IMG/M |
| 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
| 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
| 3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
| 3300005836 | Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB | Environmental | Open in IMG/M |
| 3300005994 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 | Environmental | Open in IMG/M |
| 3300006864 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 | Environmental | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300009029 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189 | Environmental | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009660 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 | Environmental | Open in IMG/M |
| 3300009662 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060 | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300012492 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610 | Host-Associated | Open in IMG/M |
| 3300012497 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 | Host-Associated | Open in IMG/M |
| 3300012498 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410 | Host-Associated | Open in IMG/M |
| 3300012882 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 | Environmental | Open in IMG/M |
| 3300012904 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1 | Environmental | Open in IMG/M |
| 3300012915 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2 | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
| 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Host-Associated | Open in IMG/M |
| 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Host-Associated | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300017944 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG | Environmental | Open in IMG/M |
| 3300018060 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300022880 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6 | Environmental | Open in IMG/M |
| 3300022915 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4 | Environmental | Open in IMG/M |
| 3300024181 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34 | Environmental | Open in IMG/M |
| 3300024283 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11 | Environmental | Open in IMG/M |
| 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025553 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes) | Environmental | Open in IMG/M |
| 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025985 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026800 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 43 (SPAdes) | Environmental | Open in IMG/M |
| 3300026830 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 33 (SPAdes) | Environmental | Open in IMG/M |
| 3300026835 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 60 (SPAdes) | Environmental | Open in IMG/M |
| 3300026941 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes) | Environmental | Open in IMG/M |
| 3300027024 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes) | Environmental | Open in IMG/M |
| 3300027445 | Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G08K3-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300027463 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK03-C (SPAdes) | Environmental | Open in IMG/M |
| 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027915 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes) | Environmental | Open in IMG/M |
| 3300031152 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S | Environmental | Open in IMG/M |
| 3300031681 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20 | Environmental | Open in IMG/M |
| 3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
| 3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
| 3300031892 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2 | Environmental | Open in IMG/M |
| 3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
| 3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
| 3300033809 | Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_D | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| FWIRElOz_00717650 | 2124908007 | Soil | MSGTPRQIARSLRAFGNAQRLGLLRHVRISPGQGACETARTLHVIEFPGSAVP |
| JGI1027J12803_1026456663 | 3300000955 | Soil | MVMHKAPKDIARSLRAFRNAHRLGLLRCVRILPGKRACEAALAQDKMEYLGNAVPRLPLAQCTRAYCECDYVP |
| JGIcombinedJ13530_1015187861 | 3300001213 | Wetland | MHKTPAQITRSLKAFWNAHKLGMLRSVSISPGRDACNAARYQTTVEYMGNVVPRLPFV* |
| Ga0055498_100331113 | 3300004058 | Natural And Restored Wetlands | MHKTPAQIARSLRAFRNAYRLGLLRSVRISPGADACEAARSQDGMEYIGNAV |
| Ga0062593_1029335741 | 3300004114 | Soil | MTMHKTPKDIARSLRAFRNAHRLGLLRCVRILPGKHACEAAMTQERMEYLGNAVPRLPLANARALNVNV |
| Ga0062589_1015395392 | 3300004156 | Soil | MHKTPKDIARSLRAFRNAHRLGLLRSVRISPGKNACEAAIAQDRMEYLGNALPRLPLAQCTRAHCECDYVP |
| Ga0062595_1022066602 | 3300004479 | Soil | MHKTPAQIARSLRAFRNAHRLGLLRSVRILPGSDACEAARSQDGVEYLGN |
| Ga0062592_1016714262 | 3300004480 | Soil | MHKTPKEIARSLRAFRNAHRLGLLRCVRILPGEHACEAARVKDGIEYLGTAVPSLPLAQCTQ |
| Ga0066807_10440731 | 3300005161 | Soil | MHKTPSQIARWLRALQKARKLGLLRSVRIDPGPGACEAAQLQRGIEYLGNTVPHLPLAGCTRSLCECD |
| Ga0066809_100661511 | 3300005168 | Soil | MHKTPSQIARWLRALQKARKLGLLRSVRIEPGPGACEAAQLQRGIEYLGNTVPHLPLA |
| Ga0070676_101304321 | 3300005328 | Miscanthus Rhizosphere | MHKTPSQIARSLRALQKAQKLGLLRSVRIAPGPDACDAAQSHRDIEYVG |
| Ga0066388_1007021751 | 3300005332 | Tropical Forest Soil | MHKAPAQIARSLRAFRNAYRLGLLRSVRISPGAYACEAARSRQEIEYTGNVVPR |
| Ga0066388_1036152042 | 3300005332 | Tropical Forest Soil | MHQSPKQIARSARGFRNAHRLGLLRSVRIVPSVDACEAARSQEGTDYLGNTVPRLPLAQCTRDHCEC |
| Ga0070677_100189861 | 3300005333 | Miscanthus Rhizosphere | MVMHKTPKDIARSLRAFRNAHRLGLLRCVRILPGKHACEAALAQDKMEYLGNAV |
| Ga0070682_1001000771 | 3300005337 | Corn Rhizosphere | MHKAPSQIARSLRAFRNAHRLGLLRSVRISPGAHACEAARSQQG |
| Ga0068868_1008012413 | 3300005338 | Miscanthus Rhizosphere | MHKAPSQIARSLRAFRNAHRLGLLRSVRISPGAHACEAARSQQGIEY |
| Ga0070660_1005806301 | 3300005339 | Corn Rhizosphere | MHKTPSQMARSLRALQKAQKLGLLRSVRISPGGEACEAAESQRGIEYLGGTVPRLPLARC |
| Ga0070661_1013041542 | 3300005344 | Corn Rhizosphere | MPGQIARSLRAFRNAHRLGLLRHVRISPGWGACEAARSLHVIEFPGSAVPRLPLAQC |
| Ga0070675_1013517341 | 3300005354 | Miscanthus Rhizosphere | MHKAPSQIARSLRAFRNAHRLGLLRSVRISPGAHACEAARSQQGIEYMGDIVPRLPLAECTRGLCNC |
| Ga0070659_1000697825 | 3300005366 | Corn Rhizosphere | MHRSPNQIARSLRAFRNAHRLGLLGSARISFGADACAVVRSQEGIEYMGNVVP |
| Ga0070659_1003184133 | 3300005366 | Corn Rhizosphere | MVMHKTPKDIARSLRAFRNAHRLGLLRCVRILPGKHACEAALAQDKMEYLGNAVPRLPLRNARELIVNVIMSRPEQRSSSEWM* |
| Ga0070663_1005360361 | 3300005455 | Corn Rhizosphere | MHKTPSQIARSLRALQKAQKLGLLRSVRISPGGEACEAAESQRGIEYLGGTVPRLPLARCTRIHCECE |
| Ga0070732_105453691 | 3300005542 | Surface Soil | MHKYPKEIARSLRSFRNAHRLNLLRCVRIAPGREACDAARSLAGVEYPGDVVPRLPLAQC |
| Ga0070695_1000829171 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MHKAPSQIARSLRAFRNAHRLGLLRSVRISPGAHACEAARSQQGIEYMGDIV |
| Ga0070696_1010502332 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | MHKTPKDIARSLRAFRNAHRLGLLRCVRILPGKHACEAALAQDKMEYLGNAVPRLPLA |
| Ga0066905_1001133291 | 3300005713 | Tropical Forest Soil | MHKTPKDIARSLRAFRNAHRLGLLRCVRISPGEHACEAARAQDRMEYLGNA |
| Ga0074470_108598651 | 3300005836 | Sediment (Intertidal) | MHKIPSQIARSLRALRNAHRIGLLRGIRVLPGREACEAVRAQLGIEYPGNNLPQL |
| Ga0066789_100680391 | 3300005994 | Soil | MHKTPKQIARSLRAIRNAHRLGLLGSVHISPGPVACEAARSQYGVQYLGNAVPRLPLAQC |
| Ga0066797_12949442 | 3300006864 | Soil | MHKTPKQIARSLRAFRNAHRLGLLGSVHITPGPVACEAARSQYGVQYLGNAVPRLPLAQCTRDHC |
| Ga0075424_1019887611 | 3300006904 | Populus Rhizosphere | MHKTPSQIARSLRALQKAQKLGLLRSVRIAPGADACDAAQSHRDIEYVGSTVPRLPLAGCTRV |
| Ga0066793_104558371 | 3300009029 | Prmafrost Soil | MHKTPAQIARSLRAFRNAHRMGLLRSVRISPGPDACEAARSQFCVEYLGNVVPRLPLAQCTRDH |
| Ga0111539_128797271 | 3300009094 | Populus Rhizosphere | MHKTPKEIARSLRAFRNAHRLGLLRCVRILPGEHACEAARVKGGIEYLGTAAPSLP |
| Ga0105245_107189743 | 3300009098 | Miscanthus Rhizosphere | MHKAPSQIARSLRAFRNAHRLGLLRSVRISPGAHACEAARSQQGIEYMGN |
| Ga0105854_13709672 | 3300009660 | Permafrost Soil | MHKTPKQIARTLRAFRNAHRLGLLGSVHISPGPVACEAARSKYGVQYLGNAVPRLPLA |
| Ga0105856_11282731 | 3300009662 | Permafrost Soil | MHKTPKQIARSLRAFRNAHRLGLLGSVHISPGPVACEAARSQYGVQYLGNAVPRL |
| Ga0126382_114439882 | 3300010047 | Tropical Forest Soil | MHKTPSQIARWLRALQKARKLGLLRSVRIEPGQGACEAAQSQRGIEYLGNTVPHLPLAGC |
| Ga0074044_111613111 | 3300010343 | Bog Forest Soil | MQNRRAQIARSLRALRNAHRLGLLRCVRIAAGANACEVARAQQGFEYSGN |
| Ga0126376_108571203 | 3300010359 | Tropical Forest Soil | MHKAPAQIARSRRAFRNAHRLGLLRSVRILPGADACESARLQRGIEYTGDAVPRLPLAECKRSHCDCKYAPSG |
| Ga0126381_1009550181 | 3300010376 | Tropical Forest Soil | MHKEPAQIARSLRALRNAHRLGLLRSVRILPGTHACEAAQSQRGIEYTGDAVPR |
| Ga0134126_104838422 | 3300010396 | Terrestrial Soil | MHKTPKDIARSIRAFRNAHRLGLLRSVRISPGKRACEAAMAQDRMEYLGNAVPRLPLAQCTRALC |
| Ga0134126_119934531 | 3300010396 | Terrestrial Soil | MHKTPSQIARSLRALQKAQKLGLLRSVRISLGGEACEAAESQRGIEYLGGT |
| Ga0105246_111837541 | 3300011119 | Miscanthus Rhizosphere | MSGMPGQIARSLRAFRNAHRLGLLRHVRISPGWGTCEAARSLHVIEFPGSAVPRLPLAQCTSDRC |
| Ga0157335_10470491 | 3300012492 | Arabidopsis Rhizosphere | MHKSPKQIARSLRGFRNAHRMGLLRCVRIAPGPNACEAARSQSGIEYLGNAIPRLPLAQCLRADCECDY |
| Ga0157319_10065302 | 3300012497 | Arabidopsis Rhizosphere | MHRSPNQIARSLRAFRNAHRLGLLRSVRISFGADACAVVRSQEDTEYMGNVVPRLPLSGCTRGQCDCKYV |
| Ga0157345_10612082 | 3300012498 | Arabidopsis Rhizosphere | MHKAPSQIARSLRAFRNAQRLGLLRSVRISPGAHAFEAARSQQGNEYMCDIVPRLPLAECTCGLCNCK |
| Ga0157304_10783872 | 3300012882 | Soil | MHKTPSQIARSLRALQKAQKLGLLRSVRISPGPEACEAAESQRGVEYLGGTVPRLPLSRCTR |
| Ga0157282_100425381 | 3300012904 | Soil | MHKTPSQIARSLRALQKAQKLGLLRSVRISPGPEACEAAEFQRGIEYLGGTVPRLPLSRC |
| Ga0157302_101163423 | 3300012915 | Soil | MHKAPSQIARSLRAFRNAHRLGLLRSVRISPGAHACEAARSQQGIEYMGNIVPRLPLAECTRGLCNC |
| Ga0164299_103271762 | 3300012958 | Soil | MHKTPSQMARSLRALQKAQKLGLLRSVRIAHGPDACDDAQSHRDIEYV |
| Ga0164299_107831381 | 3300012958 | Soil | MHKAPSQIARSLRAFRNAQRLGLLRSVRISPGAHACEAARSQQGIEYMGDIVPR |
| Ga0164302_101124001 | 3300012961 | Soil | MHKTPKDIARSIRAFRNAHRLGLLRSVRISPGKRACEAAMAQDRMEYLGNA |
| Ga0164309_109948611 | 3300012984 | Soil | MHKAPSQIARSLRAFRSAHRLGLLRSVRISPGAHACEAARSQQGIE |
| Ga0164304_116896951 | 3300012986 | Soil | MVMHKTPKDIARSLRAFRNAHRLGLLRCVRILPGKHACEAALAQDKMEYLGNAVPRLPLAQCTRAYCECDY |
| Ga0157373_111771541 | 3300013100 | Corn Rhizosphere | MHTTPKDIARSLRAFKNGHKLGLLRGVRILPGPKGCEAARAQKNTEYLGDTVPQLPLAE |
| Ga0157371_104936321 | 3300013102 | Corn Rhizosphere | MHKAPSQIARSLRAFRNAHRLGLLRSVRISPGAHACEAARSQQGIEYMGNIVPRLPLAECTRGLCNCK |
| Ga0157378_104779864 | 3300013297 | Miscanthus Rhizosphere | MHKAPSQIARSLRAFRNAHRLGLLRSVRISPGAHACEAARSQQGIEYMGDIVPRLPLAECTRGLCNCKYAPLG |
| Ga0157372_105057001 | 3300013307 | Corn Rhizosphere | MHKTPSQIARSLRALQKAQKLGLLRSVRISPGGEACEAAESQRGIEYLGGTVPRLPL |
| Ga0132256_1003436741 | 3300015372 | Arabidopsis Rhizosphere | MHKTPSQIARWLRALQKARKLGLLRSVRIEPGPGACEAAQLQRGIEYLGNTVPHLPLAGCTRSLCE |
| Ga0132256_1027935672 | 3300015372 | Arabidopsis Rhizosphere | MHKTPSQIARSLRALQKAQKLGLLRSVRIAGPDACDAAQSHRDIEYVGSTVPRLPLAGCT |
| Ga0132255_1008223353 | 3300015374 | Arabidopsis Rhizosphere | MVMHKTPKDIARSLRAFRNAHRLGLLRCVRILPGKHACEAAVAQDKMEYLGNA |
| Ga0132255_1047627351 | 3300015374 | Arabidopsis Rhizosphere | MHKTPSQIARSLRALQKAQKLGLLRSVRIAGPDACDAAQSHRDIEYVGSTVPRLPLA |
| Ga0132255_1060237102 | 3300015374 | Arabidopsis Rhizosphere | MRFSAATGYRLHLMPKSPSQIARSLRALRNADRLGLVRGVRIVPGPNPCDVVLKQFANEYPADTLPRLPLSQCTHD |
| Ga0187786_104230781 | 3300017944 | Tropical Peatland | MHKTPRQIARSLRAFRNAHRLGLLRHVRISPGRDACEAARTLHVIEYPGNAVPRLPLDQCSSDECE |
| Ga0187765_113122772 | 3300018060 | Tropical Peatland | MHKTPAQIARSLRAFRNAYRLGLLRSVRIVPGPKACDAACAQSSVEYLGNRVP |
| Ga0126371_106310343 | 3300021560 | Tropical Forest Soil | MHRTPTQIARSLRAFRNAHRQGLLRSVRIAPGSNACHAVQSQQGIEYSGDVVPRLPLPECTLAKCHCKYVPSG |
| Ga0126371_110792491 | 3300021560 | Tropical Forest Soil | MHKSPNQIARSLRAFRNAHRRCLLRSVSISFGPDACDAARSQDGVEYM |
| Ga0247792_10607801 | 3300022880 | Soil | MVMHKTPKDIARSLRAFRNAHRLGLLRCVRILPGKHACEAALAQDKMEYLGNAVPRLPLAQCTRA |
| Ga0247790_101155121 | 3300022915 | Soil | MHKTPSQIARSLRALQKAQKLGLLRSVRISPGPEACEAAESQRGVEYLGGTVPRLPLS |
| Ga0247693_10430332 | 3300024181 | Soil | MHRSPNQIARSLRAFRNAHRLGLLRSVRISFGADACAVVRSQEGIEYMGNVVPRLPLSG |
| Ga0247670_10572453 | 3300024283 | Soil | MHRSPNQIARSLRAFRNAHRLGLLRSVRISFGADACAVVRSQEGIEYMGNVVPRLPLSGCTRGQCDCKYVPS |
| Ga0207656_106536152 | 3300025321 | Corn Rhizosphere | MHRSPNQIARSLRAFRNAHRLGLLRSVRISFGADACAVVRSQEGIEYMGNVVPRLPLSGCTRGQCDCKYVPSGTDH |
| Ga0208080_10939752 | 3300025553 | Arctic Peat Soil | MHKTPKQIARSLRAFRNAHRLGLLGSVHITPGPVACEAARSQYGVQYLGNAVPRLPLAQCTRDHCEC |
| Ga0207643_110409662 | 3300025908 | Miscanthus Rhizosphere | MHRSPNQIARSLRAFRNAHRLGLLRSVRISFGADACAVVRSQEGIEYMGNVVP |
| Ga0207654_100485735 | 3300025911 | Corn Rhizosphere | MHRSPNQIARSLRAFRNAHRLGLLRSVRISFGADACAVVRSQEGIEYMGNV |
| Ga0207707_103846113 | 3300025912 | Corn Rhizosphere | MHKTPSQIARSLRALQKAQKLGLLRSVRISPGGEACEAAESQRGIEYLGG |
| Ga0207660_113507051 | 3300025917 | Corn Rhizosphere | VHKTPSQIARSLRAFRNAQKLGLLRSVRILPGPKACEAARAQTDIEYLGNLVPRLPLPDCTCELCECTYR |
| Ga0207652_109506851 | 3300025921 | Corn Rhizosphere | MHKAPSQIARSLRAFRNAHRLGLLRSVRISPGAHACEAARSQQGIEYMGDIVPRLPLAECTRGLCN |
| Ga0207670_106030523 | 3300025936 | Switchgrass Rhizosphere | MHKTPSQIARSLRALQKAQKLGLLRSVRIAPGPDACDAAQSHRDIEYVGSTVPRLPLAGYTRVH |
| Ga0207711_101610361 | 3300025941 | Switchgrass Rhizosphere | MHKAPSQIARSLRAFRNAHRLGLLRSVRISPGAHACEAARSQQGIEYM |
| Ga0207712_111094452 | 3300025961 | Switchgrass Rhizosphere | MHKTPKDIARSLRAFRNAHRLGLLRSVRISPGKNACEAAIAQDRMEYLGNALPRLPLVQCTRAHCEC |
| Ga0210117_10690372 | 3300025985 | Natural And Restored Wetlands | MHKTPAQIARSLRAFRNAHRLGLLRSVCISPGPGACDAARSQYGLEYLGNIVPRLPLAEC |
| Ga0207683_109326342 | 3300026121 | Miscanthus Rhizosphere | MSGTPRQIARSLRAFGNAQRLGLLRHVRISPGQGACETARTLHVIEFPGSAVPRLPLA |
| Ga0207742_1066562 | 3300026800 | Tropical Forest Soil | MYKTPDQIARSLRAFRNFHRLGLVRYVHILPGRISCEAARSQHGVEYLGNAVPP |
| Ga0207861_1097771 | 3300026830 | Tropical Forest Soil | MQPMYKTPDQIARSLRAFRNFHRLGLVRYVHILPGRISCEAARSQHGVEYLGNAVPPLPLARCTHNHCECKYM |
| Ga0207782_1211451 | 3300026835 | Tropical Forest Soil | MHKTPAQIARSLRAFQILHRLGLLRGVHISVGLEGCEAAHSQIGIEYPGHTVPRLPLTQ |
| Ga0207741_10138411 | 3300026941 | Tropical Forest Soil | MHKTPAQIARSLRAFQILHRLGLLRGVHISVGLEGCEAAHSQIGIEYPG |
| Ga0207819_10206571 | 3300027024 | Tropical Forest Soil | MHKTPAQIARSLRAFQILHRLGLLRGVHISVGLEGCEAAHSQIGIEYPGHTVPRLPLTQC |
| Ga0207554_1022922 | 3300027445 | Soil | MHKTPKDIARSIRAFRNAHRLGLLRSVRISPGKRACEAAMAQDRMEYLGNAVPRLP |
| Ga0207627_1033921 | 3300027463 | Soil | MHRSPNQIARSLRAFRNAHRLGLLRSVRISFGADACAVVRSQEGIEYMGNVVPRLPLSGCTRGQCDCKYVPSGTDHL |
| Ga0209974_103245081 | 3300027876 | Arabidopsis Thaliana Rhizosphere | VHKTPSQIARSLRAFRNAQKLGLLRSVRILPGPKACEAARAQTDIEYLGNLVPRLPLPDCTCELCECTY |
| Ga0209069_101492752 | 3300027915 | Watersheds | MHRTPAQIARSLRAFRNAHRLGLLRSVCVSPGPGACDAARSQYGLEYLGNIVP |
| Ga0307501_101492962 | 3300031152 | Soil | MHKAPSQIARSLRAFRNAHRLGLLRSVRISPGAHACEAARSQQGIEYIGDIVPRLPLAECTRGLCNCSMRLWE |
| Ga0318572_109808331 | 3300031681 | Soil | MHRTPTQIARSLRAFRNAHRQGLLRSVRIAPGSNACHAVQSQQGIEYSGDVVPRLPLPECTLAK |
| Ga0310813_101239504 | 3300031716 | Soil | MHKTPKEIARSLRAFRNAHRLGLLRCVRILPGEHACEAARVKGGIEYLGT |
| Ga0310813_119708101 | 3300031716 | Soil | MHKAPSQIARSLRAFRNAQRLGLLRSVRISPGAHACEAARSQQGIEYMGDIVPRLPLTE |
| Ga0310904_112809491 | 3300031854 | Soil | MHKIPKDIARSLRAIRSAHRLGLLRCVRISPGEHACEAAVAQRKMEYLGNAVP |
| Ga0310893_105582371 | 3300031892 | Soil | MHKIPKDIARSLRAIRSAHRLGLLRCVRISPGEHACEAAVAQRKMEYLGNAVPRLPLVQCTRARCECDYVPT |
| Ga0326726_123040571 | 3300033433 | Peat Soil | MHKSPKEIARSLRSFRNAHRLNLLLCVRIAPGHGACDAARSQVGVEYLGDVVP |
| Ga0316628_1023237201 | 3300033513 | Soil | MHKSPKQIARSLRTFRNAHRIGLLRSVSIAPGLNACEAARSQLGVEYLGNTVPHLPLAE |
| Ga0314871_013674_1_201 | 3300033809 | Peatland | MHKSPSQIARSLRAFRNAQRLGLLRGVRILPGPNPCEAVVGQFGSEYPGNTVPRLPLLRCTLNRCEC |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |