Basic Information | |
---|---|
Family ID | F102285 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 101 |
Average Sequence Length | 63 residues |
Representative Sequence | MKKVIAKIDFTTNIGEYIAGDEITGLTYEQIVKLNEKGFIEPLTYKDLVLIKRELEKPKKEEKL |
Number of Associated Samples | 30 |
Number of Associated Scaffolds | 101 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 100.00 % |
% of genes near scaffold ends (potentially truncated) | 1.98 % |
% of genes from short scaffolds (< 2000 bps) | 1.98 % |
Associated GOLD sequencing projects | 26 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.67 |
Hidden Markov Model |
---|
|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Unclassified (88.119 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (79.208 % of family members) |
Environment Ontology (ENVO) | Unclassified (100.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal proximal gut (81.188 % of family members) |
⦗Top⦘ |
Full Alignment |
---|
Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84. |
Powered by MSAViewer |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 23.91% β-sheet: 10.87% Coil/Unstructured: 65.22% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
|||||
Powered by Feature Viewer |
Structure Viewer | |
---|---|
| |
Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.67 |
Powered by PDBe Molstar |
⦗Top⦘ |
⦗Top⦘ |
Visualization |
---|
All Organisms Unclassified |
Powered by ApexCharts |
⦗Top⦘ |
Visualization |
---|
Fecal Rumen Rumen Cattle And Sheep Rumen Bovine Rumen Fungi-Associated Bovine Rumen |
Powered by ApexCharts |
⦗Top⦘ |
Protein ID | Sample Taxon ID | Habitat | Sequence |
_HiSeq_13603470 | 2061766007 | Bovine Rumen | MKIIANKDFTTKYEQYVKGDEIKNLTYEQIVKLNELGFIEPLSYKDLVLVKRELETSNKKKEEL |
_HiSeq_25037540 | 2061766007 | Bovine Rumen | MKTIKVVKNFIANNKPYIAGDTITDLCYEQIVKLNENGFIEPLTYEDLVIIKRELEKPKKIEEEKL |
BRPC2_00117670 | 2084038000 | Bovine Rumen | MKIIANKDFIYKGVNYIKGDELTNLKYEEIAKLNEKGFIEPLDYKSLVLIKRELEHKKNKKEE |
Ga0130078_136878455 | 3300009869 | Rumen | MKIIVKKDFTSNLGSYIKGDELKDLTYEQIVKLNELGFIEPLSYKDLVLIKRELEKKEEL |
Ga0130077_132156992 | 3300009871 | Rumen | MKKIIVKKDFVSNIGSYVVGDEINNLTYEQILKLNEKGFIEPLDYKDLVLIKRELEGGEKNGINTK* |
Ga0130077_135378843 | 3300009871 | Rumen | MKIIARIDFTSNLGEFIKGDEIHNLTYEQIVKLNEKGFIEPLTYKDLVLIKRELENPKKEDN* |
Ga0130077_141676562 | 3300009871 | Rumen | MKKIIAKKDFTSNIGNYVAGDEITDLTYEQIVKLNEMGFIEPLEFKDLVLLQRELNENKKEEVNYGVNTK* |
Ga0123349_108166971 | 3300012983 | Fecal | RIDFLLNNVGYIKGDEIKDLTYQEIVKLNEKGFIEPLEYKDLVLVKRELENKKNSKEEKL |
Ga0123349_109328632 | 3300012983 | Fecal | MKKVIAKKDFTTNVGEYIAGDEITDLTYEQIVKLNEKGFIEPLNYKDLVLIKRELNKPKKETKIKEERL* |
Ga0223824_1000075119 | 3300021254 | Cattle And Sheep Rumen | MKKIIAKVDFTSNIGNFIVGDEILNLTYEQIVKLNEKGFIEPLNYKDLILIERELKNPTKGLKIKKEEE |
Ga0223824_111716172 | 3300021254 | Cattle And Sheep Rumen | MKKIIAKVDFTANNEFYIKGDEINGLTYEQIVKLNEKGFIEPLEYKDLVIIKRELSKSKGEDKYNGTTL |
Ga0223845_111408017 | 3300021387 | Cattle And Sheep Rumen | MKKVIAKIDFTANETNYIKGDEISNLTYEQIVKLNEKGFIEPLEYKDLVLIKRELEKEKEDL |
Ga0224415_1000361529 | 3300021399 | Cattle And Sheep Rumen | MKKVIAKIDFTTNIGEYIAGDEITGLTYEQIVKLNEKGFIEPLTYKDLVLIKRELEKPKKEEKL |
Ga0224415_106677252 | 3300021399 | Cattle And Sheep Rumen | MKKIIARIDFSSNIGNYIKGDEIKNLTYKQIVKLNEKGFIEPLEYKDLVLIERELKNKEE |
Ga0224422_1158345226 | 3300021400 | Cattle And Sheep Rumen | MKKIIAKVDFTSNIGDFIAGDELSNLTYEQIVKLNEKGYIEPLTYKDLVLIKRELKNPKFKKEEL |
Ga0224422_117142635 | 3300021400 | Cattle And Sheep Rumen | MKIIAKKDFSTNIGDFIKGDEIKNLTYNQIIKLNEKGFIEPLEYKDLVLIKRELEKSKKEEEHNV |
Ga0224423_1000257429 | 3300021431 | Cattle And Sheep Rumen | MKKIIAKKDFTSNIGDYIAGDEIKGLTYEQIVKLNEKGFIEPLNYKELVLIKRELKNPTKKFKKEEE |
Ga0255060_106896951 | 3300024337 | Rumen | MKKIVAKVNFSTNVGKFIKGEEIEGLNYEQIAKLNELGYIEPLDYKDLVEIEKELKKQEIKEEL |
Ga0255059_100056707 | 3300024486 | Rumen | MNKVIAKIDFTANGEYYIKGDELNNLTYEQIVKLNEKGFIEPLEYKDLVLIKRELENPKKESKIKEERL |
Ga0255059_103428121 | 3300024486 | Rumen | MKIIARVDFTSNIGNYVAGDEIKDLNYEQIVKLNEKGFIEPLEYKDLVLIKRELDENKKKEEL |
Ga0255059_104883571 | 3300024486 | Rumen | MKIIAKVDFTTNIGEFIKGDELKGLTYEQIVKLNEKGFIEPLSYKELVLIKRELEKPKKE |
Ga0247611_104013302 | 3300028591 | Rumen | MKIIAKKDFTMNDKGYIEGEELTGLTMEEIVKLNEQGFIEPLGFKDLVLLQRELEGKKSKKEEK |
Ga0247611_105110512 | 3300028591 | Rumen | MKKVIAKIDFSANGVNYIAGDEIKGLTYEQICKLNEQGYIEPLSYKDLVLIERELNKREEKL |
Ga0247611_106409742 | 3300028591 | Rumen | MKKVIAKIDFSANGEYYIKGDELNNLTYEQIVKLNELGFIEPLEYRDLILIKRELDKKKEEL |
Ga0247611_108741881 | 3300028591 | Rumen | MKKIIAKKDFTSNIGDYMKGEEINDLTFEQIVKLNEQGFIEPLEYKDLIFIKRELENPKKKKEEKNGTTL |
Ga0265301_100015597 | 3300028797 | Rumen | MKIIASKDFTSNLGEFIKGDELKGLTYEQIVKLNEQGFIEPLQYKDLVLIKRELQELKKEENHNV |
Ga0265301_100201258 | 3300028797 | Rumen | MKKVIAKIDFVANDKQYIVGDEIKGLSYNQIVKLNEKGFIEPLEYRDLVLIKRELDSKNKIKEEL |
Ga0265301_100914556 | 3300028797 | Rumen | MKKIIAKIDFTSNIGEFVKGEEISNLTYDQIVKLNELGFIEPLEYRDLVLLKKELETSNKKKEERL |
Ga0265301_101327263 | 3300028797 | Rumen | MKKVIAKIDFTSNIGSYIAGDEIENLTYEQIVKLNEKGFIESLSFKDLILIKRELDNPKK |
Ga0265301_101645485 | 3300028797 | Rumen | MKIIAKIDFTANGVGYIKGDELKNLTYEQIVRLNEKGFIEPLDFKDLVLIKRELDNKNKMKEEL |
Ga0265301_102703314 | 3300028797 | Rumen | LKKVVAKKNFSANGKQYIIGDELNGLSYNQIVKLNEKGFIEPLDYKDLVLIKRELEKEGK |
Ga0265301_102820461 | 3300028797 | Rumen | IKDFTASGKDFIVGDEIKTTNYEAIVKLNEQGFIEPLSYKDLVLIKRELDNPKFDKEEGK |
Ga0265301_110261641 | 3300028797 | Rumen | MKKIIAIKDFVANGKSFIAGDEIETQNYEAIVKLNELGFIEPLDYKDLVLIKREL |
Ga0265301_110605952 | 3300028797 | Rumen | MKKVIAKKDFTTNIGDYIAGDEITGLTYEQIVKLNEQGFIEPLTYKDLVLIKRELENPNYKKEEVK |
Ga0265301_110733642 | 3300028797 | Rumen | MKKIIAKIDFRLNNIDYIKGDEILTDNITTIIKLNEKGYIEPLTYRDIVLIKRELENKEE |
Ga0247608_1000100116 | 3300028805 | Rumen | MKKIIAKKDFIANGVGYIKGDEIKDLTYMQIVRLNEKGFIEPLEYKDLVLIKRELENKNVKEEKLXNLIQVH |
Ga0247608_1000117524 | 3300028805 | Rumen | MKKIIAQVDFTTNIGNYIKGDEIENLTYDQIVKLNEKGFIEPLEYKDLVLIKRELEKKKEEL |
Ga0247608_100096162 | 3300028805 | Rumen | MKIIAKIDFTSNKGEFIKGDELKDFTYEEIVKLNEKGFIEPLTYKDLVLIKRELEKPKKE |
Ga0247608_100926652 | 3300028805 | Rumen | MKKVIAKIDFTTNNEDYIVGDEINNLSYNQIVKLNEKGFIEPLSYKDLVLIKRELEKKKEEL |
Ga0247608_104494502 | 3300028805 | Rumen | MKIIAKVDFTTNIGEFIKGDELKGLTYEQIVKLNEKGFIEPLSYKELVLIKRELEKPKKEEL |
Ga0247608_114123232 | 3300028805 | Rumen | MKKIIAKVNFSTNIGEFIAGDEIENLTYEQIVKLNEKGFIEPLTYEDLVLIKRELKKPKKEEKL |
Ga0265298_1000102619 | 3300028832 | Rumen | MKIIANKDFTTKYEQYVKGDEIKNLTYEQVVKLNELGFIEPLSYKDLVLVKRELETSNKKKEEL |
Ga0265298_100010837 | 3300028832 | Rumen | MKKIIAIKDFVASGISYIKGDEIKTRNYETIAKLNEKGFIEPLDYKDLVLIKRELDNLKEKEEK |
Ga0265298_1000133234 | 3300028832 | Rumen | MRKIIAKIDFTSNLGNFIVGDEIKGLNYNQIVKLNELGYIEPLNYKDLVLIKRELENPKIEKEEK |
Ga0265298_100034957 | 3300028832 | Rumen | MKIIAKVDFVANNEQYIKGDEIKELNYNQIVKLNELGFIEPLTFKDLTIIKRELENKGKEERL |
Ga0265298_100110107 | 3300028832 | Rumen | MKIIAKIDFTTLKGSYVKGDEITDLTYEQIVKLNEKGFIEPLTYKDLVLIEREMKNKEEK |
Ga0265298_100141419 | 3300028832 | Rumen | MRKIIAAKDFIASGTSYLKGDEIKTNNYDAIVKLNEQGLIEPLDYKDLVLIKRELDNPEIFKKEEE |
Ga0265298_100145855 | 3300028832 | Rumen | MKIIAKIDFTANNKKYIVGDEINDLTYEQIVRLNEMGFIKPLDYKDLVLLERELKEKKIVKKEEL |
Ga0265298_100340066 | 3300028832 | Rumen | MKIIAQKDFSTNLGDYVEGDEIKGLTYEQIVKLNEKGFIKPLSFKDLVLIKRELNNKKNE |
Ga0265298_100392622 | 3300028832 | Rumen | MKIVAKIDFVANNKKYIAGDEINDLTYEQIARLNEMGFIKPLDYKDLVLLERELKEKKIVKKEEL |
Ga0265298_100723225 | 3300028832 | Rumen | MKKIIASKDFTSNGKFFIKGDEIEHLKYYQIVKLNELGLIEPLEYKDLVLIKRELDKKKEVK |
Ga0265298_102960952 | 3300028832 | Rumen | MKIIARKDFTSNLGNFIKGDELKGLTYNQIVKLNELGLIEPLSYKDLVLIKRELEKKEEL |
Ga0265298_103619312 | 3300028832 | Rumen | MIKIIAKQDFTSNIGDFIAGEEIKNLSYKQIVKLNEKGLIEPLSYKDLVLIKRELEKPKKEV |
Ga0265298_106255863 | 3300028832 | Rumen | MKKIVAKIDFTANGNGYIKGDEINGLTYEQIVKLNEKGFIEPLEYKDLVLIKRELDKNKNKEERL |
Ga0265298_113184972 | 3300028832 | Rumen | IAKKNFTSNIGSYVEGEEITGLQYYQIVKLNELGFIEPLDYKDLILIKRELSNKKIVKEE |
Ga0247610_1000080224 | 3300028833 | Rumen | MKKVIASKDFTTNLGSFIKGDEINDLTYDQIVKLNEQGFIEPLDYRDLVLIKRELDNKKKEVKIKEERL |
Ga0265299_1000088044 | 3300028887 | Rumen | MKKIIVKKDFIANGKEYIEGDEVITDNYEAIVKLNEKGFIEPLTYKDLVLIKRELDEKNKGGE |
Ga0265299_1000095330 | 3300028887 | Rumen | MKIVAKIDFVANNKKYIAGDEINDLTYEQIVRLNEMGFIKPLDYKDLVLLERELKEKKIVKKEEL |
Ga0265299_1000098521 | 3300028887 | Rumen | MKKIIAKIDFIANNKGYIKGDEITGLNYNQIVKLNEKGFIEPLEFKDLVLIKRELDNKKNKKEEE |
Ga0265299_100235211 | 3300028887 | Rumen | MKKIIAIKDFVAGGKSFIVGDEIKTKNYEAIVKLNEKGFIEPLGYKDLVLIKRELENTKE |
Ga0265299_100303295 | 3300028887 | Rumen | MKKIIAKKDFSSNLGNYIAGDEIKNLTYEQIVKLNELGFIEPLSYKELVIIKRELENKEE |
Ga0265299_102847473 | 3300028887 | Rumen | VKKIIAKVDFTSNIGSYIAGEEIKGLNYRQIVKLNELGFIEPLDFKDLVFIQRELNNPKKEIKEKEE |
Ga0265299_103525463 | 3300028887 | Rumen | MIKIIAKQDFSIGGNLFIKGDEIPTKNYDTIIKLNEAGLIEPLEYKDLVLIKREIENPKKEKKEEK |
Ga0265299_105648323 | 3300028887 | Rumen | MKKIIAKIDFRLNNVDYIKGDEILTDNIRTIIKLNEKGFIEPLTYRDIVLIKRELENKEE |
Ga0265300_1000055353 | 3300028914 | Rumen | MKIIAKIDFTANNEQYIKGDEIKGLNYNQIVKLNELGFIEPLTYRDLVLIKRELEKPKKEERL |
Ga0265300_100080421 | 3300028914 | Rumen | MKKVIAKKDFTANGVMYIAGDELNDLSYEQIVKLNESGFIEPLEYRDLVLIKRELENLKKQIVKEEK |
Ga0265300_100325742 | 3300028914 | Rumen | MKKIIAKIDFTTNIGEYVKGDEITGLTYDQIVKLNEKGFIEPLGYRDLILIKRELEKKEERL |
Ga0265300_103803593 | 3300028914 | Rumen | MKIIARVDFVANNEQYIKGDEIKGLNYNQIVKLNELGFIEPLTFKDLTIIKRELENKGKEERL |
Ga0265300_105729921 | 3300028914 | Rumen | MKKIIAKVDFTTTDGREYIAGEEVEINNYYSIIRLNEKGFIEPLTYKDLVLIKRELEKNKKEEVL |
Ga0265300_105863133 | 3300028914 | Rumen | MKIIAKIDFTANNESYIKGDEINNLDYRQIVKLNELGFIEPLSYRDLVLIKRELEKPKKEERL |
Ga0265300_107504901 | 3300028914 | Rumen | MKIIASKDFTSNLGEFIKGDELKGLTYEQIVKLNEQGFIEPLQYKDLVLIKRELQELKKEENHNVXESRKN |
Ga0061013_117691962 | 3300030772 | Fungi-Associated Bovine Rumen | MKKIIAKKDFTSNIGNYVAGDEITDLTYEQIVKLNEMGFIEPLEFKDLVLLQRELNENKKEEVNYGVNTK |
Ga0061013_123875751 | 3300030772 | Fungi-Associated Bovine Rumen | MKIIAKVDFTTNIGEFIKGDELKGLTYEQIVKLNEKGFIEPLSYKDLVLIKRELEK |
Ga0061015_114740213 | 3300030773 | Fungi-Associated Bovine Rumen | MKIIARIDFTSNLGEFIKGDEIHNLTYEQIVKLNEKGFIEPLTYKDLVLIKRELENPKKEDN |
Ga0061018_132156992 | 3300031085 | Fungi-Associated Bovine Rumen | MKKIIVKKDFVSNIGSYVVGDEINNLTYEQILKLNEKGFIEPLDYKDLVLIKRELEGGEKNGINTK |
Ga0326513_1000990915 | 3300031760 | Rumen | MKKVIAKIDFTTNIGEYIAGDEITGLTYEQIVRLNEQGFIEPLEYKDLVLIKRELDKPKKEDRL |
Ga0326513_104356823 | 3300031760 | Rumen | MKKIIARVDFTSKIGDYVAGDEIKNATYEQIVKLNEQGFIEPLEYKDLVLIKRELDNPKKEIKNKEEKL |
Ga0326513_110314882 | 3300031760 | Rumen | MKKIIAKVNFVLNGVSYITGDEIHNLTYNQIAKLNEKGFIQPLAYEDLVLIKRELDNPKFKKEEK |
Ga0326511_1000039962 | 3300031867 | Rumen | MKKIIAKVNFGLNGVNYIAGDEIYNLTYNQIAKLNEKGFIQPLAYEDLVLIKRELNNPKFKKEEK |
Ga0326511_1000040912 | 3300031867 | Rumen | MKKVIAKIDFTTNIGNYIAGDEITGLTYEQIVKLNEQGFIEPLEYRDLVLIKRELENKNINKEERL |
Ga0326511_108166581 | 3300031867 | Rumen | MKIIAKKDFSTNIGDYVKGDEVKGLTYEQIAKLNEKGFIESLSFKDLVLIK |
Ga0310696_100984823 | 3300031993 | Rumen | MKKIIAIKDFVAGGKSFIVGDEIKTKNYEAIVKLNEKGFIEPLGYKDLVLIKRELENTKEEVE |
Ga0310696_101410625 | 3300031993 | Rumen | MKIIAKINFSSNIGDYIAGEEIKDLTYNQIVKLNEKGFIEPLDYKDLILIKRELKNVKEE |
Ga0310696_108864803 | 3300031993 | Rumen | MKKIIASCDFTIGENYYIKGEEIKNLKYEDIVKLNEKGFIEPLDFKELMLIKRELEKSKEENDYGSAL |
Ga0310696_111404692 | 3300031993 | Rumen | VNKTVKKIIAKVDFTSNIGSYIAGEEIKGLNYRQIVKLNELGFIEPLDFKDLVFIQRELNNPKKEIKEKEE |
Ga0310696_111425652 | 3300031993 | Rumen | MKKVIAKKDFTTNIGDYIAGDEITGLTYEQIVKLNEQGFIEPLTYKDLVLIKRELDKPKKEEKL |
Ga0310696_119063082 | 3300031993 | Rumen | MKKIIAKVDFSSNVGSYVVGDEIKDLNYNQIVKLNEKGFIEPLDFKDLVLIKRELDNPNKSDKNKEEEKTWH |
Ga0310696_122486192 | 3300031993 | Rumen | PMKKIIAKIDFSTNIGDYVKGDEINDLTYEQIVKLNEKGFIEPLEFKDLVLIKRELNKKKNEL |
Ga0310691_106853542 | 3300031994 | Rumen | MKKIIAKVNFSTNIGEFIAGDEIENLTYEQIVKLNEKGFIEPLAYEDLVLIKRELEKKKNEL |
Ga0310786_1000359928 | 3300031998 | Rumen | MKKIIAKINFTSNIGEYLEGDEIKNVTYEQIAKLNELGWIEPLEYKDLILIKRELEETKKEEK |
Ga0310786_103323345 | 3300031998 | Rumen | MKIIARVDFVANNEQYIKGDEIKGLNYNQIVKLNELGFIEPLTFKDLTIIKRELENKG |
Ga0310786_105623542 | 3300031998 | Rumen | MKKIIASKDFTSNLGSFVKGEEITGLNYNQIVKLNEKGYIEPLEYKDLVQIEKELKNKKL |
Ga0310786_114205832 | 3300031998 | Rumen | MKKVIAKIDFTSNIGDYIAGDEITGLTFEQIVKLNEKGFIEPLTYKDLVLIKRELDKPKKEEKL |
Ga0310786_125151152 | 3300031998 | Rumen | MKKIIAKKDFVAGNQSYIAGDEIKTTNYDAIVKLNELGFIEPLEYKDLVLIKRELNNIKEETKNGSKI |
Ga0326509_11824962 | 3300032036 | Rumen | MKKVIAKIDFTSNIGNYVAGDEIKDLTYEQIVKLNEKGFIEPLEYKDLVLIKRELNKKKEEL |
Ga0326512_100776334 | 3300032038 | Rumen | MKKIIAKIDFSSNIGNYIKGDEIKNLTYKQIVKLNEKGFIEPLEYKDLVLIERELKNKEE |
Ga0326512_111049542 | 3300032038 | Rumen | MKKVIAKMDFTSKIGNFAKGDELNKLTYEQIVKLNEQGFIEPLSYKDLV |
Ga0310690_100354383 | 3300033463 | Rumen | MKKIIAKKDFVVGNEMIIAGDEIKTKNYDAIVKLNEQGLIEPLNFKDLVLIKRELENPNYKKEEVK |
Ga0310690_109741752 | 3300033463 | Rumen | MIKIIASKDFSSNYGDFIKGDEIKNLTYMQIVRLNEKGLIEPLDYKDLVLIKRELENKNMKEEK |
Ga0310690_112443712 | 3300033463 | Rumen | MKKIIAIKDFVANGKSFIAGDEIETQNYEAIVKLNELGFIEPLDYKDLVLIKRELENTKKEVEKYGSKI |
Ga0310690_126348162 | 3300033463 | Rumen | MKKVIAKIDFIANNNKYIIGDEINGLTYEQIVKLNEKGFIEPLDYKDLVLIERELKQPKKKEEL |
⦗Top⦘ |