Metagenome Family F102209

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F102209
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	58 residues
Representative Sequence	MEIPKIKEDESLAMWRERLAREFNLDYKMQELIREVSVTSYIRGTDVMLDTLKKEGRL
Number of Associated Samples	21
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.00 %
% of genes near scaffold ends (potentially truncated)	9.90 %
% of genes from short scaffolds (< 2000 bps)	74.26 %
Associated GOLD sequencing projects	19
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (46.535 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (91.089 % of family members)
Environment Ontology (ENVO)	Unclassified (99.010 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (74.257 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.35% β-sheet: 0.00% Coil/Unstructured: 54.65%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01844	HNH	21.78
PF03354	TerL_ATPase	2.97
PF08291	Peptidase_M15_3	1.98
PF01555	N6_N4_Mtase	1.98
PF14359	DUF4406	1.98
PF01381	HTH_3	0.99
PF00959	Phage_lysozyme	0.99
PF01145	Band_7	0.99
PF13392	HNH_3	0.99
PF12728	HTH_17	0.99
PF05135	Phage_connect_1	0.99
PF00438	S-AdoMet_synt_N	0.99
PF06378	DUF1071	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	2.97
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.98
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.98
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.98
COG0192	S-adenosylmethionine synthetase	Coenzyme transport and metabolism [H]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.47 %
Unclassified	root	N/A	46.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
cellular organisms	root	All Organisms → cellular organisms	30.69 %
Viruses	superkingdom	All Organisms → Viruses	22.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.78 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	21.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.78 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.99 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	21.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.78 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.99 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	21.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.78 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.99 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.99 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.78 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	20.79 %
unclassified Clostridia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia	0.99 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.99 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.78 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	20.79 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	0.99 %
Methylotenera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera	0.99 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.78 %
Prevotellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae	17.82 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.99 %
Methylotenera oryzisoli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → Methylotenera oryzisoli	0.99 %
unclassified Podoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae	0.99 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.78 %
Prevotella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	11.88 %
Pseudoprevotella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Pseudoprevotella	3.96 %
crAss-like viruses	clade	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses	0.99 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	0.99 %
Methylotenera oryzisoli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → Methylotenera oryzisoli	0.99 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.78 %
Prevotella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	11.88 %
Pseudoprevotella muciniphila	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Pseudoprevotella → Pseudoprevotella muciniphila	3.96 %
unclassified Crassvirales	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses → unclassified Crassvirales	0.99 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	0.99 %
Methylotenera oryzisoli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → Methylotenera oryzisoli	0.99 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.78 %
Prevotella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	11.88 %
Pseudoprevotella muciniphila	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Pseudoprevotella → Pseudoprevotella muciniphila	3.96 %
CrAssphage sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses → unclassified Crassvirales → CrAssphage sp.	0.99 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	0.99 %
Methylotenera oryzisoli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → Methylotenera oryzisoli	0.99 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	0.99 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2061766007\|rumenHiSeq_NODE_4310550_len_4177_cov_1_679914	All Organisms → Viruses → Predicted Viral	4227	Open in IMG/M
2077657009\|BRPC3_GDEZLPW01B1IDS	Not Available	520	Open in IMG/M
3300014043\|Ga0120385_1118411	Not Available	564	Open in IMG/M
3300014057\|Ga0120384_1126496	Not Available	891	Open in IMG/M
3300021254\|Ga0223824_10000692	All Organisms → cellular organisms → Bacteria	41982	Open in IMG/M
3300021254\|Ga0223824_11052602	Not Available	583	Open in IMG/M
3300021256\|Ga0223826_10396539	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Pseudoprevotella → Pseudoprevotella muciniphila	1133	Open in IMG/M
3300021387\|Ga0223845_10016747	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	18219	Open in IMG/M
3300021440\|Ga0213919_1043158	Not Available	961	Open in IMG/M
3300028591\|Ga0247611_10005860	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	15978	Open in IMG/M
3300028591\|Ga0247611_10803193	Not Available	985	Open in IMG/M
3300028797\|Ga0265301_10025593	All Organisms → cellular organisms → Bacteria	4784	Open in IMG/M
3300028797\|Ga0265301_10223796	All Organisms → Viruses → Predicted Viral	1423	Open in IMG/M
3300028805\|Ga0247608_10010459	All Organisms → cellular organisms → Bacteria	9139	Open in IMG/M
3300028805\|Ga0247608_10112249	Not Available	2592	Open in IMG/M
3300028805\|Ga0247608_11270178	Not Available	659	Open in IMG/M
3300028833\|Ga0247610_10066151	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses → unclassified Crassvirales → CrAssphage sp.	3541	Open in IMG/M
3300028886\|Ga0256407_10152000	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	2037	Open in IMG/M
3300028914\|Ga0265300_10449017	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	882	Open in IMG/M
3300028914\|Ga0265300_10473937	Not Available	856	Open in IMG/M
3300031760\|Ga0326513_10022298	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae	4670	Open in IMG/M
3300031760\|Ga0326513_10023030	All Organisms → Viruses → Predicted Viral	4604	Open in IMG/M
3300031760\|Ga0326513_10034899	All Organisms → Viruses → Predicted Viral	3809	Open in IMG/M
3300031760\|Ga0326513_10065620	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	2873	Open in IMG/M
3300031760\|Ga0326513_10122239	Not Available	2169	Open in IMG/M
3300031760\|Ga0326513_10197198	All Organisms → Viruses → Predicted Viral	1740	Open in IMG/M
3300031760\|Ga0326513_10208673	All Organisms → Viruses → Predicted Viral	1694	Open in IMG/M
3300031760\|Ga0326513_10298877	All Organisms → Viruses → Predicted Viral	1423	Open in IMG/M
3300031760\|Ga0326513_10406812	All Organisms → Viruses → Predicted Viral	1218	Open in IMG/M
3300031760\|Ga0326513_10416695	All Organisms → Viruses → Predicted Viral	1203	Open in IMG/M
3300031760\|Ga0326513_10641784	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300031760\|Ga0326513_10653636	Not Available	946	Open in IMG/M
3300031760\|Ga0326513_10805227	Not Available	840	Open in IMG/M
3300031760\|Ga0326513_10868173	Not Available	804	Open in IMG/M
3300031760\|Ga0326513_11007704	Not Available	736	Open in IMG/M
3300031760\|Ga0326513_11218216	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	656	Open in IMG/M
3300031760\|Ga0326513_11220054	Not Available	655	Open in IMG/M
3300031760\|Ga0326513_11839728	Not Available	504	Open in IMG/M
3300031853\|Ga0326514_10029595	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	3914	Open in IMG/M
3300031853\|Ga0326514_10087099	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Pseudoprevotella → Pseudoprevotella muciniphila	2467	Open in IMG/M
3300031853\|Ga0326514_10381170	Not Available	1242	Open in IMG/M
3300031853\|Ga0326514_10406808	Not Available	1201	Open in IMG/M
3300031853\|Ga0326514_10453043	Not Available	1135	Open in IMG/M
3300031853\|Ga0326514_10567972	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	1005	Open in IMG/M
3300031853\|Ga0326514_10735781	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Pseudoprevotella → Pseudoprevotella muciniphila	869	Open in IMG/M
3300031853\|Ga0326514_10788777	Not Available	835	Open in IMG/M
3300031853\|Ga0326514_11066637	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Pseudoprevotella → Pseudoprevotella muciniphila	695	Open in IMG/M
3300031853\|Ga0326514_11134545	Not Available	669	Open in IMG/M
3300031853\|Ga0326514_11238687	Not Available	633	Open in IMG/M
3300031853\|Ga0326514_11252919	Not Available	629	Open in IMG/M
3300031853\|Ga0326514_11668630	Not Available	522	Open in IMG/M
3300031867\|Ga0326511_10010880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → Methylotenera oryzisoli	7196	Open in IMG/M
3300031867\|Ga0326511_10014355	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	6300	Open in IMG/M
3300031867\|Ga0326511_10054137	All Organisms → Viruses → Predicted Viral	3464	Open in IMG/M
3300031867\|Ga0326511_10078449	Not Available	2933	Open in IMG/M
3300031867\|Ga0326511_10146105	All Organisms → Viruses → Predicted Viral	2210	Open in IMG/M
3300031867\|Ga0326511_10193715	All Organisms → Viruses → Predicted Viral	1938	Open in IMG/M
3300031867\|Ga0326511_10324688	Not Available	1510	Open in IMG/M
3300031867\|Ga0326511_10434815	All Organisms → Viruses → Predicted Viral	1301	Open in IMG/M
3300031867\|Ga0326511_10636706	Not Available	1060	Open in IMG/M
3300031867\|Ga0326511_10639811	Not Available	1057	Open in IMG/M
3300031867\|Ga0326511_10665626	All Organisms → Viruses → Predicted Viral	1034	Open in IMG/M
3300031867\|Ga0326511_10849408	Not Available	899	Open in IMG/M
3300031867\|Ga0326511_10980808	Not Available	825	Open in IMG/M
3300031867\|Ga0326511_11045743	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300031867\|Ga0326511_11065229	Not Available	784	Open in IMG/M
3300031867\|Ga0326511_11124347	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	758	Open in IMG/M
3300031867\|Ga0326511_11890582	Not Available	541	Open in IMG/M
3300032007\|Ga0310695_10098701	All Organisms → Viruses → Predicted Viral	2794	Open in IMG/M
3300032007\|Ga0310695_10890160	Not Available	659	Open in IMG/M
3300032007\|Ga0310695_11088180	Not Available	562	Open in IMG/M
3300032030\|Ga0310697_10997108	Not Available	834	Open in IMG/M
3300032030\|Ga0310697_11779919	Not Available	563	Open in IMG/M
3300032038\|Ga0326512_10001021	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae	22749	Open in IMG/M
3300032038\|Ga0326512_10027442	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	4234	Open in IMG/M
3300032038\|Ga0326512_10044085	All Organisms → Viruses → Predicted Viral	3381	Open in IMG/M
3300032038\|Ga0326512_10171560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1739	Open in IMG/M
3300032038\|Ga0326512_10183788	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	1678	Open in IMG/M
3300032038\|Ga0326512_10240338	All Organisms → Viruses → Predicted Viral	1456	Open in IMG/M
3300032038\|Ga0326512_10291652	All Organisms → Viruses → Predicted Viral	1311	Open in IMG/M
3300032038\|Ga0326512_10304972	All Organisms → Viruses → Predicted Viral	1279	Open in IMG/M
3300032038\|Ga0326512_10343464	All Organisms → Viruses → Predicted Viral	1196	Open in IMG/M
3300032038\|Ga0326512_10397259	All Organisms → Viruses → Predicted Viral	1101	Open in IMG/M
3300032038\|Ga0326512_10423134	All Organisms → Viruses → Predicted Viral	1062	Open in IMG/M
3300032038\|Ga0326512_10443576	Not Available	1033	Open in IMG/M
3300032038\|Ga0326512_10446924	Not Available	1029	Open in IMG/M
3300032038\|Ga0326512_10486091	Not Available	979	Open in IMG/M
3300032038\|Ga0326512_10524842	Not Available	935	Open in IMG/M
3300032038\|Ga0326512_10571704	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	887	Open in IMG/M
3300032038\|Ga0326512_10656339	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	814	Open in IMG/M
3300032038\|Ga0326512_10815890	Not Available	708	Open in IMG/M
3300032038\|Ga0326512_10845494	Not Available	692	Open in IMG/M
3300032038\|Ga0326512_10858833	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	685	Open in IMG/M
3300032038\|Ga0326512_10913643	Not Available	658	Open in IMG/M
3300032038\|Ga0326512_10947762	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300032038\|Ga0326512_10968010	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300032038\|Ga0326512_11022931	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	610	Open in IMG/M
3300032038\|Ga0326512_11058908	Not Available	596	Open in IMG/M
3300032038\|Ga0326512_11069754	Not Available	592	Open in IMG/M
3300032038\|Ga0326512_11071312	Not Available	592	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	99.01%
Environmental	Environmental	0.99%

Habitat	Taxonomy	Distribution
Mammals	Host-Associated → Mammals	99.01%
Aquatic	Environmental → Aquatic	0.99%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Mammals → Digestive System	99.01%
Freshwater	Environmental → Aquatic → Freshwater	0.99%

Habitat	Taxonomy	Distribution
Foregut	Host-Associated → Mammals → Digestive System → Foregut	99.01%
Creek	Environmental → Aquatic → Freshwater → Creek	0.99%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen	99.01%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	91.09%
Cattle And Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen	3.96%
Bovine Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Bovine Rumen	1.98%
Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Sheep Rumen	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.99%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2061766007	Bovine rumen microbial communities fromthe University of Illinois at Urbana-Champaign, USA, that are switchgrass associated - Sample 470	Host-Associated	Open in IMG/M
2077657009	Bovine rumen viral communities from University of Illinois Dairy Farm in Urbana, IL, Cow rumen 6993	Host-Associated	Open in IMG/M
3300014043	Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1248	Host-Associated	Open in IMG/M
3300014057	Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1208	Host-Associated	Open in IMG/M
3300021254	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021256	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021387	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021440	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 3-17 MG	Environmental	Open in IMG/M
3300028591	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028797	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04	Host-Associated	Open in IMG/M
3300028805	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2	Host-Associated	Open in IMG/M
3300028833	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028886	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_04	Host-Associated	Open in IMG/M
3300028914	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03	Host-Associated	Open in IMG/M
3300031760	Bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518	Host-Associated	Open in IMG/M
3300031853	Bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518	Host-Associated	Open in IMG/M
3300031867	Bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518	Host-Associated	Open in IMG/M
3300032007	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_04 (v2)	Host-Associated	Open in IMG/M
3300032030	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 (v2)	Host-Associated	Open in IMG/M
3300032038	Bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518	Host-Associated	Open in IMG/M
3300033463	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04 (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
_HiSeq_17507850	2061766007	Bovine Rumen	MKVPPIKEDESLAMWRERLAREFNLDYKMQELIREVSVTSYIRGTDVMLDTLKKEGKIR
BRPC3_01033750	2077657009	Bovine Rumen	MKIPKIKDDESLAMWRERLAREFNLDYKMQELIREVSITSYIHGTNTTLEILKKEGRL
Ga0120385_11184112	3300014043	Sheep Rumen	MEIPKIKDDENLAMWRERLAQEFNLDYKMQELLREVSITSYIHGTDDIIDTLKKEGRL*
Ga0120384_11264962	3300014057	Sheep Rumen	MKIPKIKEDESLAMWRERLARELNLDYKMQELIREVSVTSYIRGTDVMLDTLKKEGKIR*
Ga0223824_1000069229	3300021254	Cattle And Sheep Rumen	MKIPKIREDESLAMWRARIADTFNLDHQMQEIIREVSITSYIHGTNDVIDTLKKEGRI
Ga0223824_110526022	3300021254	Cattle And Sheep Rumen	MKVPPIKKDESLAMWRERLAQEFNLDYKMQELIREVSITSYIHGTNTTLEILKKEGRV
Ga0223826_103965393	3300021256	Cattle And Sheep Rumen	MKIPKIKEDESLAMWRERLAQEFNLDYKMQELIREVSVTSYIRGTDVMLDTLKKEGKIR
Ga0223845_1001674711	3300021387	Cattle And Sheep Rumen	MKIPKINEDESLAAWRERLAQEFNLDAKMQELIREVSVTSYIHGTNVMLDTLKKEWKL
Ga0213919_10431582	3300021440	Freshwater	MKIPKIKDDESLAMWRERLAREFNLDYKMQELIREVSVTSYIRGTDVMLDTLKKEGKIRK
Ga0247611_1000586016	3300028591	Rumen	MKIPKIREEESLAMWRSRLAEEFNLDDKMKELIREVSVTSYIHGTNTILDTLKKEGRL
Ga0247611_108031932	3300028591	Rumen	MKIPKIKEDESLAMWRERLARELNLDYKMQELIREVSITSYIHGTNTTLEILKKEGRV
Ga0265301_100255938	3300028797	Rumen	MKVPPIKEDESLAMWRERLAREFNLDYKMQELIREVSVTSYIRGTDVMLDTLKK
Ga0265301_102237963	3300028797	Rumen	MKIPKKKDDESLAMWRERLARELNLDEKTQELIREVSITSYIVGTNTIIDTLKKEGRL
Ga0247608_1001045915	3300028805	Rumen	MKVPPIKKDETLAMWRERLARELNLDEKTQELIREVSITSYIHGTNDIIDTLKKEGRL
Ga0247608_101122494	3300028805	Rumen	MKILKIKKDESLAAWRDRLAQEFNLDDRMQEIIREVSITSYIHGTDTTLEILKQEGRI
Ga0247608_112701782	3300028805	Rumen	MKIPKIKEDETLAAWRERLAQEFNLDPKMQELIREVSMTSYIRGTDVMLDTLKKEGKIK
Ga0247610_100661516	3300028833	Rumen	MKIPKIKEDETLAAWRERLAQEFNLDQKMQELIREVSMTSYIRGTDVMLDTLKKEGKIQ
Ga0256407_101520006	3300028886	Rumen	TSKNVTTMKIPKKKDDESLAMWRERLARELNLDEKTQELIREVSITSYIVGTNTIIDTLKKEGRL
Ga0265300_104490172	3300028914	Rumen	LVLTSKSVTTMKIPKIKEDESLAMWRERLARELNLDYKMQELIREVSITSYIHGTNTTLEILKKEGRV
Ga0265300_104739372	3300028914	Rumen	MKIPKIKEDESLAAWRERLAQEFNLDDRMKEIIREVSVTSYIFGTNMIIDTLKKEGKL
Ga0326513_100222986	3300031760	Rumen	MKIPNIKENESLTMWRERLAQEFNLDSKMQELIREVSVTSYIHGMNTMLDTLKKEGKNN
Ga0326513_100230308	3300031760	Rumen	MKIPNIKKDESLAAWRERLAQEFNLDDRMQEIIREVSVTSYIHGTNTTLEILKQEGRI
Ga0326513_100348998	3300031760	Rumen	MKIPKIKEDESLAMWRERLAQEFNLDHKMQELIREVSITSYIHGTNTTLEILKKEGRL
Ga0326513_100656203	3300031760	Rumen	MEIPKIKEDESLAAWRERLAEVFHLDPKMQELIREVSVTSYIHGTNVMLDTLKKEHYI
Ga0326513_101222392	3300031760	Rumen	MKIPKIKDDESLAMWRERLARELNLDYKMQELIREVSITSYIRGTDVMLDTLKKEGRI
Ga0326513_101971984	3300031760	Rumen	MKIPKIKEDESLAAWRERLAQEFNLDYKMQELIREVSMTAYIHGTNVTLDILKKEGRL
Ga0326513_102086733	3300031760	Rumen	MKIPKIKDDESLAMWRERLAQEFNLDPKMQELLREVSITSYIHGTDDIMDSLKKEGKL
Ga0326513_102988772	3300031760	Rumen	MEIPKIKEDESLAMWRERLARELNLDYKMQELIREVSITSYIHGTNTTLEILKKEGRV
Ga0326513_104068122	3300031760	Rumen	MKIPKIKEDESLAMWRERLAQEFNLDHKMQELIREVSITSYIHGTNTTLEILKKEGKL
Ga0326513_104166953	3300031760	Rumen	MKIPKIKDDESLAMWRERLAQEFNLDPKMQELLREVSITSYIHGTDDMMDSLKKEGKL
Ga0326513_106417842	3300031760	Rumen	MEIPKIKEDESLAMWRERLARELNLDYKMQELIREVSITSYIHGTNMMLDTLKKEGKIRQ
Ga0326513_106536362	3300031760	Rumen	MKIPKIKEDESLAMWEARLAEEFNLDPKMQELIREVSVTAYIHGTNVILDTLKKEGKI
Ga0326513_108052273	3300031760	Rumen	MKIPKIKENESLAAWRERLAQEFNLDYKMQELIREVSMTSYIRGTNVIIDTLKKDGRI
Ga0326513_108681732	3300031760	Rumen	MKVPPIKEDESLAMWRERLAREFNLDLKMQEILREVSVTSYIHGTNMIIDTLKKEGKL
Ga0326513_110077041	3300031760	Rumen	MTIPKIKEDESLAMWRERLAREFNLDYKMQELIREVSVTSYIRGTDVML
Ga0326513_112182162	3300031760	Rumen	MKIPKKKDDESLAMWRERLARELNLDEKTQELIRDVSITSYIVGTNTIIDTLKKEGRL
Ga0326513_112200541	3300031760	Rumen	MKIPKIKDDESLAMWRERLARELNLDYKMQELIREVSVTSYIRGTDVMLDTLKKEGRL
Ga0326513_118397282	3300031760	Rumen	MKIPKIKEDESLAMWQACLAKEFNLDDKMKELIREVSVTSYIHGTNMILDTLKKEGRL
Ga0326514_100295955	3300031853	Rumen	MKIPKIKEDETLAAWRERLAQEFNLDPKMQELIREVSVTSYIRGTDVMLDTLKKEGKIK
Ga0326514_100870994	3300031853	Rumen	MKIPKIKEDESLAMWRERLAQEFNLDHKMQELIREVSITSYIHGTNTTLEILKKEGRV
Ga0326514_103811702	3300031853	Rumen	MEIPKIKEDESLAMWRERLAQEFNLDPKMQEILREVSVTSYMHGTNMILDTLKKEGRLID
Ga0326514_104068081	3300031853	Rumen	MKIPKIKDDESLAMWRERLARELNLDYKMQELIREVSVTSYIRGTDVMLDTLKKEGKIR
Ga0326514_104530433	3300031853	Rumen	MKIPKIKEDESLAAWRERLAQEFNLDYKMQELIREVSMTSYIRGTNVIIDTLKKDGRI
Ga0326514_105679721	3300031853	Rumen	MKIPPIKKDESLAMWCERLAREFNLSEQMKEILREVSVTSYIHGTNDVTKIVTNALDEGR
Ga0326514_107357813	3300031853	Rumen	MKIPKIKEDESLAMWEARLAEEFNLDAKMQELIREVSVTAYIHGTNMVIDTLKKEGRL
Ga0326514_107887773	3300031853	Rumen	MEIPKIKEDESLAMWRERLARELNLDYKMQELIREVSITSYIHGTDHIIDALKKDGRL
Ga0326514_110666372	3300031853	Rumen	LTSKNVTTMKIPKKKDDESLAMWCERLARELNLDEKTQELIREVSITSYIVGTNTIIDTLKKDGRL
Ga0326514_111345453	3300031853	Rumen	MKIPKIKEDESLAMWRERLAQEFNLDHKMQELIREVSITSYIHGTNTTLEILKREGRV
Ga0326514_112386872	3300031853	Rumen	LTSKSVTTMKIPKKKDDESLAMWRERLARELNLDEKTQELIREVSITSYIVGTNTIIDTLKKEGRL
Ga0326514_112529192	3300031853	Rumen	MEIPKIKDDESLAMWRERLAKEFDLDYKMQELLREVSVTSYIHGTDMIIETLKKEGRL
Ga0326514_116686301	3300031853	Rumen	MEIPKIKEDESLAMWRERLAQEFDLDNRMKELIREVSITSYIHGTNVIIETLKKENKL
Ga0326511_100108803	3300031867	Rumen	MKIPKIKEDETLAAWRERMAQEFNLDPEMQELIREVSVTSYIRGTDVTIGMLKKEGKI
Ga0326511_100143556	3300031867	Rumen	MKVPPIKKDETLAMWRERLARELNLGEKTQELIREVSITSYIHGTNTTLETLKKEGRL
Ga0326511_100541372	3300031867	Rumen	MKIPKIKDDESLAMWRERLAQEFNLDYKMQELLREVSITSYIHGTDDIMDSLKKEGKL
Ga0326511_100784493	3300031867	Rumen	MEIPKIKEGESLDMWRERLAQEFNLDNRMKELIREVSITSYIHGTNVIIETLKKENKL
Ga0326511_101461055	3300031867	Rumen	MKIPKIKEDETLAAWLERLAQEFNLDPKMQELIREVSVTSYIRGTDVMLDTLKKEGKIK
Ga0326511_101937155	3300031867	Rumen	MKIPKIKEDESLAAWRERLAQEFHLDYKMQELIREVSVTSYIHGTNTTLEILKKEGRV
Ga0326511_103246883	3300031867	Rumen	MKIPKIKEDESLAAWRERLAQEFNLDYKMQELIREVSVTSYIHGTNTTLEILKKEGRV
Ga0326511_104348152	3300031867	Rumen	MEIPKIKEDESLAMWRERLAREFNLDYKMKELIREVSVTSYIRGTDVMLDTLKKEGKIRKYV
Ga0326511_106367061	3300031867	Rumen	MKIPKIKEDETLAAWRERLAQEFNLDHKMQELIREVSVTSYIRGTDVMLDTLKKEGKI
Ga0326511_106398113	3300031867	Rumen	MEIPKIKEDESLAMWRERLAREFNLDYKMQELIREVSVTSYIRGTDVMLDTLKKEGKIRQ
Ga0326511_106656262	3300031867	Rumen	MKIPKIKEDESLAMWRERLAHEFNLNYKMQELLREVSVTSYIRGTDVMLDTLKKEGRV
Ga0326511_108494083	3300031867	Rumen	MKIPKIKDNESLSMWRERLAQEFNLDPKMQELLREVSITSYIHGTNVTLDILKKEGRL
Ga0326511_109808081	3300031867	Rumen	MKIPKIKEDESLAMWRQRLAQEFNLDHKMQELIREVSVTSYIHGTNVTLEILKKEGRI
Ga0326511_110457432	3300031867	Rumen	LTSKNDTTMKIPKKKDDESLAMWRERLARELNLDEKTQELIREVSITSYIVGTNTIIDTLKKEGRL
Ga0326511_110652291	3300031867	Rumen	MTIPKIKEDESLAMWRERLAREFNLDYKMQELIREVSVTSYIRGTDVMLDTLKKEGKIR
Ga0326511_111243472	3300031867	Rumen	MKIPKKKDDESLAMWRERLARELNLDYKMQELIREVSVTSYIVGTNTIIDTLKKEGRL
Ga0326511_118905822	3300031867	Rumen	MEIPKIKEDESLAMWRERLARELNLDHNMQELIREVSVTSYIRGTDVMLDTLKKEGRL
Ga0310695_100987015	3300032007	Rumen	LTSKNVTTMKIPKKKDDESLAMWRERLARELNLDEKTQELIREVSITSYIVGTNTIIDTLKKEGRL
Ga0310695_108901602	3300032007	Rumen	MKIPKIKEDESLAMWQARLAQEFNLDYKMQEIIREVSVTSYIHGTNATLEILKKEGKIQQ
Ga0310695_110881802	3300032007	Rumen	LTSKSVTTMEIPKIKEDESLAMWRERLAREFNLDYKMQELIREVSVTSYIRGTDVMLDTLKKEGKIRK
Ga0310697_109971082	3300032030	Rumen	MKIPKIKKDESLAMWRERLAQEFNLDPKMQEILREVSMTSYILGTNMILDTLKKEGRL
Ga0310697_117799191	3300032030	Rumen	MKIPKIKEDETLAAWRERLAQELNLDHKMQAIIREVSMTAYIRGTNTTLSILKEEGKI
Ga0326512_1000102119	3300032038	Rumen	MKIPKIKEDESLAMWEARLAQEFNLDYKMQELIREVSVTAYIHGTNVILETLKKEGKI
Ga0326512_100274426	3300032038	Rumen	MEIPKIKDDESLAMWCERLARELNLDYKMQELIREVSITSYIRGTDVMLDTLKKEGRI
Ga0326512_100440857	3300032038	Rumen	MKIPPIKEDENLAMWRARLVEEFHLDAWMDELLREVSVTSYIRGTDVMLDTLKKEGKL
Ga0326512_101715602	3300032038	Rumen	MKIPKIEEDETLAAWRERLAQEFNLDPKMQELIREVSMTSYIRGTDVTIGMLKKEGKI
Ga0326512_101837882	3300032038	Rumen	MKIPKIKEDESLAAWRERLVLEFNLDPKMQELIREVSVTSYIHGTNVTIGILKKEGRI
Ga0326512_102403383	3300032038	Rumen	MEIPKIKEDESLAMWRERLARELNLDHKMQELIREVSITSYIHGTNVTLDILKKEGRL
Ga0326512_102916522	3300032038	Rumen	MNIPKIKEDESLSAWRERLAQEFNLDYKMQELLREVSITSYIRGTDAIINVLKKEGRL
Ga0326512_103049723	3300032038	Rumen	MEIPKIKEDESLAMWRERLARELNLDDKMQELIREVSITSYIVGTNTIIDTLKKEGRL
Ga0326512_103434642	3300032038	Rumen	MKIPKIKEDESLAMWEARLAEEFNLDPKMQELIREVSVTAYIHGTNMIIDTLKKEGRL
Ga0326512_103972592	3300032038	Rumen	LTSKNVTTMEIPKIKEDESLAMWRERLAQEFNLDYKMQELLREVSITSYIHGTDAIIDTLKKEGRL
Ga0326512_104231343	3300032038	Rumen	MKIPKIKEDETLAAWRERLAQEFNLDPKMQELIREVSVTSYIRGTDVMLDTLKKEGKI
Ga0326512_104435763	3300032038	Rumen	MWIAKKQEQSMKIPKIKEDETLAAWLERLAQEFNLDPKMQELIREVSVTSYIRGTDVMLDTLKKEGKIK
Ga0326512_104469242	3300032038	Rumen	MTIPKIKEDESLAMWRARLVEEFHLDAWMDELLREVSITSYIRGTNVMFDTLKKEGKL
Ga0326512_104860912	3300032038	Rumen	MKIPPIKEDESLAMWRARLVEGFHLDAWMEELLREVSVTSYIRGTDVMLDTLKKEGRI
Ga0326512_105248421	3300032038	Rumen	KIKENESLAAWRERLAQEFNLDYKMQELIREVSVTSYIHGTNTTLEILKKEGKL
Ga0326512_105717042	3300032038	Rumen	MKIPKKKDDESLAMWRERLARELNLDEKTHELIREVSITSYIVGTNTIIDTLKKEGRL
Ga0326512_106563393	3300032038	Rumen	TMKIPKKKDDESLAMWRERLARELNLDEKTQELIREVSITSYIVGTNTIIDTLKKEGRL
Ga0326512_108158901	3300032038	Rumen	MKIPKIKEDETLAAWRERLAQEFNLDPKMQELIREVSVTSYIRGTDVMLYTLKKEGKIK
Ga0326512_108454941	3300032038	Rumen	MKIPKIKEDESLAAWRERLAQEFNLDYKMQELIREVSVTSYIHGTNTTLEILKKEAG
Ga0326512_108588332	3300032038	Rumen	MKIPKIKDDESLAMWRERLAQEFNLDYQMQELLREVSIASYIHGTNAIIDVLKKEGRL
Ga0326512_109136432	3300032038	Rumen	MKIPKIKDDESLAMWRERLAKEFNLDYKMQELLREVSVTSYIHGTDAIIDALKKEGRL
Ga0326512_109477622	3300032038	Rumen	MKIPKIKKDESLAMWRERLAQEFNLDPKMQELLREVSITSYIHGTDDIMDSLKKEGKL
Ga0326512_109680102	3300032038	Rumen	MEIPKIKEDESLAMWRERLAREFNLDYKMQELIREVSVTSYIRGTDVMLDTLKKEGRL
Ga0326512_110229312	3300032038	Rumen	LTSKSVTTMKIPKKKDDESLAMWCERLARELNLDEKTQELIREVSITSYIFGTNTIIDTLKKEGRL
Ga0326512_110589081	3300032038	Rumen	GQSMKVPPIKEDESLAMWRERLARELNLDYNMQELIREVSITSYIHGTNMIIDTLKKEGK
Ga0326512_110697541	3300032038	Rumen	MKIPKIKDDESLAMWRERLARELNLDYKMQELIREVSITSYIRGTDVMLD
Ga0326512_110713123	3300032038	Rumen	MEIPKIKDDESLAMWRERLARELNLDYKMQELIREVSVTSYIRGTDVMLDTLKKEGRL
Ga0310690_100562914	3300033463	Rumen	MKVPPIKKDESLAMWRERLAREFNLSEQVKEILREVSVTSYIHGTNDMMDAINSKKQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102209

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences