Metagenome Family F102122

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F102122
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	69 residues
Representative Sequence	MARAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHLSSHALPLDKD
Number of Associated Samples	68
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.47 %
% of genes near scaffold ends (potentially truncated)	24.51 %
% of genes from short scaffolds (< 2000 bps)	80.39 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (51.961 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (60.784 % of family members)
Environment Ontology (ENVO)	Unclassified (57.843 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.17% β-sheet: 0.00% Coil/Unstructured: 47.83%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01569	PAP2	28.43
PF04120	Iron_permease	8.82
PF01566	Nramp	2.94
PF01555	N6_N4_Mtase	1.96
PF01568	Molydop_binding	1.96
PF05016	ParE_toxin	1.96
PF05532	CsbD	0.98
PF00589	Phage_integrase	0.98
PF06271	RDD	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	2.94
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.96
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.96
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.96
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.98
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.96 %
Unclassified	root	N/A	48.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.96 %
Unclassified	root	N/A	48.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.96 %
Unclassified	root	N/A	48.04 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.96 %
Unclassified	root	N/A	48.04 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	51.96 %
Unclassified	root	N/A	48.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	44.12 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	5.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.98 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.98 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	2.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.98 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.98 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	2.94 %
Ferrimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium	0.98 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	2.94 %
unclassified Cellulomonas	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas	0.98 %
Ferrimicrobium acidiphilum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium → Ferrimicrobium acidiphilum	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	2.94 %
Cellulomonas sp. WB94	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. WB94	0.98 %
Ferrimicrobium acidiphilum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium → Ferrimicrobium acidiphilum	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_52797_len_1022_cov_18_786694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1072	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig246297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	973	Open in IMG/M
3300001402\|JGI20195J14853_1046774	Not Available	562	Open in IMG/M
3300001412\|JGI20173J14856_1014967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1363	Open in IMG/M
3300001536\|A1565W1_10875016	Not Available	807	Open in IMG/M
3300001537\|A2065W1_10958764	Not Available	608	Open in IMG/M
3300001871\|JGI24133J20442_1027040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1398	Open in IMG/M
3300001871\|JGI24133J20442_1082839	Not Available	569	Open in IMG/M
3300002066\|JGIcombinedJ21911_10041207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1604	Open in IMG/M
3300002068\|JGIcombinedJ21913_10040358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2061	Open in IMG/M
3300002072\|JGIcombinedJ21914_10027155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2127	Open in IMG/M
3300002549\|JGI24130J36418_10028206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1650	Open in IMG/M
3300002549\|JGI24130J36418_10062854	Not Available	927	Open in IMG/M
3300002563\|JGI24138J36424_10007976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3602	Open in IMG/M
3300002563\|JGI24138J36424_10046924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1202	Open in IMG/M
3300002563\|JGI24138J36424_10069247	Not Available	905	Open in IMG/M
3300002564\|JGI24134J36421_10051313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1149	Open in IMG/M
3300002564\|JGI24134J36421_10117267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300002565\|JGI24137J36423_1054531	Not Available	930	Open in IMG/M
3300002565\|JGI24137J36423_1083877	Not Available	682	Open in IMG/M
3300003369\|JGI24140J50213_10031635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1948	Open in IMG/M
3300005938\|Ga0066795_10014835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2160	Open in IMG/M
3300005938\|Ga0066795_10021914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1822	Open in IMG/M
3300005947\|Ga0066794_10028183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1644	Open in IMG/M
3300005947\|Ga0066794_10168734	Not Available	658	Open in IMG/M
3300005947\|Ga0066794_10200811	Not Available	599	Open in IMG/M
3300005980\|Ga0066798_10121681	Not Available	744	Open in IMG/M
3300006055\|Ga0097691_1005781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6944	Open in IMG/M
3300006640\|Ga0075527_10109997	Not Available	765	Open in IMG/M
3300006642\|Ga0075521_10611657	Not Available	536	Open in IMG/M
3300006642\|Ga0075521_10614053	Not Available	535	Open in IMG/M
3300006792\|Ga0075530_1275827	Not Available	517	Open in IMG/M
3300006795\|Ga0075520_1128201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1125	Open in IMG/M
3300006864\|Ga0066797_1033628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1802	Open in IMG/M
3300006864\|Ga0066797_1064592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1285	Open in IMG/M
3300006949\|Ga0075528_10055921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1017	Open in IMG/M
3300006949\|Ga0075528_10058921	Not Available	991	Open in IMG/M
3300006949\|Ga0075528_10067390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	927	Open in IMG/M
3300006949\|Ga0075528_10114395	Not Available	714	Open in IMG/M
3300006950\|Ga0075524_10105012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1209	Open in IMG/M
3300006950\|Ga0075524_10261731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300006950\|Ga0075524_10269912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	744	Open in IMG/M
3300009010\|Ga0075519_1046848	Not Available	520	Open in IMG/M
3300009029\|Ga0066793_10431239	Not Available	756	Open in IMG/M
3300011969\|Ga0120166_1001162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	6475	Open in IMG/M
3300011969\|Ga0120166_1033095	Not Available	519	Open in IMG/M
3300011971\|Ga0120175_1001470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	5544	Open in IMG/M
3300011971\|Ga0120175_1004998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2160	Open in IMG/M
3300011971\|Ga0120175_1013289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium → Ferrimicrobium acidiphilum	1072	Open in IMG/M
3300011987\|Ga0120164_1006127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2620	Open in IMG/M
3300011987\|Ga0120164_1008128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2166	Open in IMG/M
3300011987\|Ga0120164_1061757	Not Available	533	Open in IMG/M
3300012003\|Ga0120163_1040122	Not Available	1196	Open in IMG/M
3300012005\|Ga0120161_1016612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3148	Open in IMG/M
3300012005\|Ga0120161_1082900	Not Available	801	Open in IMG/M
3300012011\|Ga0120152_1112467	Not Available	758	Open in IMG/M
3300013501\|Ga0120154_1143839	Not Available	539	Open in IMG/M
3300013765\|Ga0120172_1018638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2060	Open in IMG/M
3300013768\|Ga0120155_1056183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1159	Open in IMG/M
3300013772\|Ga0120158_10013831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7143	Open in IMG/M
3300013772\|Ga0120158_10248544	Not Available	891	Open in IMG/M
3300013772\|Ga0120158_10263387	Not Available	855	Open in IMG/M
3300014031\|Ga0120173_1022209	Not Available	913	Open in IMG/M
3300014058\|Ga0120149_1104224	Not Available	760	Open in IMG/M
3300014820\|Ga0120160_1014925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1897	Open in IMG/M
3300014823\|Ga0120170_1002026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7925	Open in IMG/M
3300014823\|Ga0120170_1013222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2557	Open in IMG/M
3300014823\|Ga0120170_1127109	Not Available	501	Open in IMG/M
3300025329\|Ga0209072_100857	Not Available	513	Open in IMG/M
3300025457\|Ga0208850_1008901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1955	Open in IMG/M
3300025481\|Ga0208079_1028796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1520	Open in IMG/M
3300025481\|Ga0208079_1078390	Not Available	657	Open in IMG/M
3300025505\|Ga0207929_1000342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	13235	Open in IMG/M
3300025533\|Ga0208584_1153920	Not Available	520	Open in IMG/M
3300025553\|Ga0208080_1107406	Not Available	569	Open in IMG/M
3300025575\|Ga0209430_1056332	Not Available	1080	Open in IMG/M
3300025579\|Ga0207927_1018772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2147	Open in IMG/M
3300025581\|Ga0208355_1003664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	6045	Open in IMG/M
3300025619\|Ga0207926_1031192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1602	Open in IMG/M
3300025650\|Ga0209385_1017308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2942	Open in IMG/M
3300025650\|Ga0209385_1145026	Not Available	711	Open in IMG/M
3300025692\|Ga0209744_1064743	Not Available	1325	Open in IMG/M
3300025692\|Ga0209744_1160669	Not Available	716	Open in IMG/M
3300025716\|Ga0209746_1102767	Not Available	864	Open in IMG/M
3300025718\|Ga0209123_1171012	Not Available	741	Open in IMG/M
3300025718\|Ga0209123_1246979	Not Available	556	Open in IMG/M
3300025721\|Ga0209587_1032738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. WB94	1513	Open in IMG/M
3300025721\|Ga0209587_1062678	Not Available	1029	Open in IMG/M
3300025739\|Ga0209745_1238626	Not Available	521	Open in IMG/M
3300025750\|Ga0209747_1097455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1000	Open in IMG/M
3300025750\|Ga0209747_1139598	Not Available	780	Open in IMG/M
3300025764\|Ga0209539_1125930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1010	Open in IMG/M
3300025764\|Ga0209539_1147340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	911	Open in IMG/M
3300025836\|Ga0209748_1269247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552	Open in IMG/M
3300025846\|Ga0209538_1095822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1204	Open in IMG/M
3300025846\|Ga0209538_1132249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	979	Open in IMG/M
3300025852\|Ga0209124_10352863	Not Available	542	Open in IMG/M
3300025854\|Ga0209176_10070203	Not Available	800	Open in IMG/M
3300025891\|Ga0209585_10422986	Not Available	547	Open in IMG/M
3300026223\|Ga0209840_1111849	Not Available	586	Open in IMG/M
3300026271\|Ga0209880_1001190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7451	Open in IMG/M
3300026273\|Ga0209881_1086883	Not Available	775	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.76%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	88.24%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.76%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	60.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	25.49%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	10.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.96%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300001402	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012	Environmental	Open in IMG/M
3300001412	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001871	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311	Environmental	Open in IMG/M
3300002066	Barrow Graham LP Ref core NGADG0002-211 (Barrow Graham LP Ref core NGADG0002-211,NGADG0004-311, ASSEMBLY_DATE=20131004)	Environmental	Open in IMG/M
3300002068	Barrow Graham LP Ref core NGADG0004-212 (Barrow Graham LP Ref core NGADG0004-212,NGADG0011-311, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002072	Barrow Graham LP Ref core NGADG0011-211 (Barrow Graham LP Ref core NGADG0011-211,NGADG0004-312, ASSEMBLY_DATE=20131005)	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300002563	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312	Environmental	Open in IMG/M
3300002564	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312	Environmental	Open in IMG/M
3300002565	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005980	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006792	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009010	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB136-I	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300011969	Permafrost microbial communities from Nunavut, Canada - A23_80cm_12M	Environmental	Open in IMG/M
3300011971	Permafrost microbial communities from Nunavut, Canada - A7_80cm_12M	Environmental	Open in IMG/M
3300011987	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012005	Permafrost microbial communities from Nunavut, Canada - A15_80cm_0M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014031	Permafrost microbial communities from Nunavut, Canada - A35_80cm_0.25M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014820	Permafrost microbial communities from Nunavut, Canada - A15_80cm_0.25M	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300025329	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-G (SPAdes)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025553	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025575	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-33A (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025716	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)	Environmental	Open in IMG/M
3300025718	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-31A (SPAdes)	Environmental	Open in IMG/M
3300025721	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D (SPAdes)	Environmental	Open in IMG/M
3300025739	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025764	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312 (SPAdes)	Environmental	Open in IMG/M
3300025836	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)	Environmental	Open in IMG/M
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00853930	2088090004	Soil	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEXXXX
Perma_A_C_00975590	2124908032	Soil	MARAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHLSSHALPLDKD
JGI20195J14853_10467742	3300001402	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMALHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHAVPVDED*
JGI20173J14856_10149672	3300001412	Arctic Peat Soil	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHHSSHTLPLDKD*
A1565W1_108750162	3300001536	Permafrost	MVTAKGRNHPYLKLEGEALDNHMMAMHGWSMQMVAVKGTQTLAQNHNYIGDMHRKEHHLAPQAV
A2065W1_109587641	3300001537	Permafrost	MVTAKGRNHPYLKLEGEALDNHMMAMHGWSMQMVAVKGTQTLAQNHNYIGDMHRKEHHLAPQAVAVEDD*
JGI24133J20442_10270403	3300001871	Arctic Peat Soil	MAMAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHRSSHTLPLDKD*
JGI24133J20442_10828391	3300001871	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQXYNYIGEMHRREHXLPPHAVPVDED*
JGIcombinedJ21911_100412074	3300002066	Arctic Peat Soil	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHRSSHTLPLDKD*
JGIcombinedJ21913_100403581	3300002068	Arctic Peat Soil	MAMDKWRNHPYLELEGEALDVHMMVMHGWSMQMVAVKGAQTLAQKHNYIGAMHLKELYRSSHTLPLDKD*
JGIcombinedJ21914_100271551	3300002072	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHRXEHHLPPHAVPVDED*
JGI24130J36418_100282062	3300002549	Arctic Peat Soil	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGDMHLKEHHHSSHTLPLDKD*
JGI24130J36418_100628542	3300002549	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHAVPVDED*
JGI24138J36424_100079761	3300002563	Arctic Peat Soil	MAMDKWRNHPYLELEGEALDVHMMVMHGWSMQMVAVKDTQTLAQKHNNIGAMHLKELYRSSHTLPLDKD*
JGI24138J36424_100469241	3300002563	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHRREHHLPPHAVPVDED*
JGI24138J36424_100692471	3300002563	Arctic Peat Soil	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHRSSHTLPLDK
JGI24134J36421_100513132	3300002564	Arctic Peat Soil	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMXAVKGTQTLAQKHNYIGAMHLKEHXRSSHTLPLDKD*
JGI24134J36421_101172672	3300002564	Arctic Peat Soil	KWRNHPYLESEGEALGNHMMAMHRLEHQMVAVKGTQTLARKHSYIGAMHLKEHHRSSHTLPLDKD*
JGI24137J36423_10545311	3300002565	Arctic Peat Soil	MATAKWRNHPYLELDGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHRSSHTLPLDKE*
JGI24137J36423_10838771	3300002565	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHHRE
JGI24140J50213_100316353	3300003369	Arctic Peat Soil	MAMAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHHSSHTLPLDKD*
Ga0066795_100148353	3300005938	Soil	MAMAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLARKYNYIGDMHLKEHHHSSHTLPLDKD*
Ga0066795_100219142	3300005938	Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQTYNYIGDMHRREHHLPPHAVPVDED*
Ga0066794_100281833	3300005947	Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQTYNYIGDMHLKEHHHSSHTLPLDKD*
Ga0066794_101687341	3300005947	Soil	MVRAKGRNHPYLELEGEAIDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGEMHRREHHLPPHAVPVDED*
Ga0066794_102008112	3300005947	Soil	LCGEGEFLMAMAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHRSSHTLPLDK
Ga0066798_101216812	3300005980	Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQTYNYIGDLHRREHHLPPHAVPVDED*
Ga0097691_10057814	3300006055	Arctic Peat Soil	MVRATGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQTYNYIGDMHLKEHHHSSHTLPLDKD*
Ga0075527_101099972	3300006640	Arctic Peat Soil	LCGGELLMATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHRSSHTLPLDKE*
Ga0075521_106116572	3300006642	Arctic Peat Soil	MAKAKWRNHPYLELEGEALDNHMMARHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHHSSHTLPLDKD*
Ga0075521_106140532	3300006642	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMALHGWSMQMVAVKGTQTLAQTYNYIGDMHLKEHHHSSHTLPLDKD*
Ga0075530_12758272	3300006792	Arctic Peat Soil	MVRAKGRNHPYLELQGEALDNHMMALHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHFVPVDED*
Ga0075520_11282013	3300006795	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDLHRKEHHLPPHAVPVDED*
Ga0066797_10336281	3300006864	Soil	MVRAKGRNHPYLELEGEAIDNHMMAMHGWSMQMVAVKGTQALAQKYNYIGDLHRREHHLPPHVVPVDED
Ga0066797_10645922	3300006864	Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHVVPVDED*
Ga0075528_100559211	3300006949	Arctic Peat Soil	VRAKGRNHPYLELEGEALDNHMMALHGWSMQMVAVKGTQTLAQKYNYIGALHRREHHLPPHAVPVDED*
Ga0075528_100589212	3300006949	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHAVPVD
Ga0075528_100673902	3300006949	Arctic Peat Soil	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQSLAQKHNYIGAMHLKEHHRSPHTLPLDKE*
Ga0075528_101143951	3300006949	Arctic Peat Soil	MVRAKGRNHPYLELEGEAIDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHAVPVDED*
Ga0075524_101050123	3300006950	Arctic Peat Soil	GRNHPYLELEGEALDNHMMALHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHAVPVDED*
Ga0075524_102617312	3300006950	Arctic Peat Soil	LELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGDMHLKEHHHSSHTLPLDKD*
Ga0075524_102699121	3300006950	Arctic Peat Soil	ELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHAVPVDED*
Ga0075519_10468481	3300009010	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGEMHRREHHLPPHAVPVDED*
Ga0066793_104312392	3300009029	Prmafrost Soil	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMMAVKGTQTLAQKHNYIGAMHLKEHRRSSHTLPLDKD*
Ga0120166_10011629	3300011969	Permafrost	MVKAKGRNHPYLELEGEALDDHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHRSEHP
Ga0120166_10330951	3300011969	Permafrost	GRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGEMHRREHHLPPHVLPVDED*
Ga0120175_10014708	3300011971	Permafrost	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHRSSHTLPLDKE*
Ga0120175_10049983	3300011971	Permafrost	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHHREHTLPPHAVPVDED*
Ga0120175_10132893	3300011971	Permafrost	MVRAKGRNHPYLESEGEALDNHMMAMHGWSMKMVAVKGAQTLAQKYNYIGDMHLKE
Ga0120164_10061273	3300011987	Permafrost	MVKAKGRNHPYLELEGEALDDHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHRREHPLAPHAVPVDED*
Ga0120164_10081283	3300011987	Permafrost	MAKAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHHSSHTLPLDKD*
Ga0120164_10617572	3300011987	Permafrost	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGEMHRREHHLPPHVLPVDED*
Ga0120163_10401222	3300012003	Permafrost	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGEMHRRGHRLPPHAVPVDED*
Ga0120161_10166122	3300012005	Permafrost	MVRAKGRNHPYLESEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHHSSHTLPLDKD*
Ga0120161_10829001	3300012005	Permafrost	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGEMHRREHHL
Ga0120152_11124671	3300012011	Permafrost	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHHSSHTLLLDKD*
Ga0120154_11438391	3300013501	Permafrost	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHRSSHTLPLDKE*
Ga0120172_10186383	3300013765	Permafrost	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGDMHRKEHHLAPQAVAVEDD*
Ga0120155_10561832	3300013768	Permafrost	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHHSSHTLLLDKD*
Ga0120158_100138318	3300013772	Permafrost	MVKAKGRNHPYLELEGEALNDHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHRREHPLAPHAVPVDED*
Ga0120158_102485441	3300013772	Permafrost	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGEMHRRGHHLPPHAVPVDED*
Ga0120158_102633871	3300013772	Permafrost	MAKAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHHSSHTLLLDKD*
Ga0120173_10222091	3300014031	Permafrost	MVKAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHRSSHTLPLDKD*
Ga0120149_11042241	3300014058	Permafrost	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGAMHLKEHHRSSHTLPLDKE*
Ga0120160_10149252	3300014820	Permafrost	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGEMHRREHHLPPHVLRVDED*
Ga0120170_10020269	3300014823	Permafrost	MVKAKGRNHPYLELEGEALNDHMMAMHGWSMPMVAVKGTQTLAQKYNYIGDMHRREHPLAPHAVPVDED*
Ga0120170_10132223	3300014823	Permafrost	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVALKGTQTLAQKHNYIGAMHLKEHHRSSHTLPLDKE*
Ga0120170_11271091	3300014823	Permafrost	MVTAKGRNHPYLKLEGEALDNHMMAMHGWSMQMVAVKGTQTLAQNHNYIGDMHRKEHH
Ga0209072_1008571	3300025329	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHRREHHLPPHAVPVDED
Ga0208850_10089012	3300025457	Arctic Peat Soil	MAMAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHHSSHTLPLDKD
Ga0208079_10287962	3300025481	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHAVPVDED
Ga0208079_10783901	3300025481	Arctic Peat Soil	LCGEGEFLMAMAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHHSSHTLPLDKD
Ga0207929_100034212	3300025505	Arctic Peat Soil	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQSLAQKHNYIGAMHLKEHHRSPHTLPLDKE
Ga0208584_11539202	3300025533	Arctic Peat Soil	MATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHHSSHTLPLDKD
Ga0208080_11074062	3300025553	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMALHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHAVPVDED
Ga0209430_10563321	3300025575	Arctic Peat Soil	LCGGELLMATAKWRNHPYLELEGEALDNHMMAMHGWSMQMMAVKGTQTLARKHSYIGAMHLKEHHRSSHTLPLDKD
Ga0207927_10187723	3300025579	Arctic Peat Soil	LCGGELLMATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHHSSHTLPLDKD
Ga0208355_10036649	3300025581	Arctic Peat Soil	MVRATGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHAVPVDED
Ga0207926_10311921	3300025619	Arctic Peat Soil	MVRATGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQTYNYIGDMHLKEHHHSSHTLPLDKD
Ga0209385_10173083	3300025650	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDLHRKEHHLPPHAVPVDED
Ga0209385_11450261	3300025650	Arctic Peat Soil	LCGEEEFLMATANWRNHPYLELEGEALDNHIVAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHHSSHTLPLDKD
Ga0209744_10647432	3300025692	Arctic Peat Soil	LCGGELLMATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHRSSHTLPLDKD
Ga0209744_11606691	3300025692	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHRKEHHLPPHAVPVDED
Ga0209746_11027672	3300025716	Arctic Peat Soil	LCGGELLMATAKWRNHQYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHAVPVDED
Ga0209123_11710122	3300025718	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGEMHRREHPLPPHAVPVDED
Ga0209123_12469791	3300025718	Arctic Peat Soil	LCGGELLMATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQSLAQKHNYIGAMHLKEHHRSPHTLPLDKE
Ga0209587_10327381	3300025721	Arctic Peat Soil	YLELQGEARDNHMMALHGWSMQMVAVKGTQTLAQKYNYIGDLRRREHHLPPHFVPVDED
Ga0209587_10626781	3300025721	Arctic Peat Soil	MVRAKGRNHPYLELQGEALDNHMMALHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHFVPVDED
Ga0209745_12386262	3300025739	Arctic Peat Soil	MAMAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHRSSHTLPLDKE
Ga0209747_10974552	3300025750	Arctic Peat Soil	MATAKWRNHPYLELDGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHRSSHTLPLDKE
Ga0209747_11395981	3300025750	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQTYNYIGDLHRREHHLPPHAVPV
Ga0209539_11259303	3300025764	Arctic Peat Soil	PYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDLHRREHHLPPHAVPVDED
Ga0209539_11473401	3300025764	Arctic Peat Soil	PGASRLCGEGEFLMAMDKWRNHPYLELEGEALDVHMMVMHGWSMQMVAVKGAQTLAQKHNYIGAMHLKELYRSSHTLPLDKD
Ga0209748_12692471	3300025836	Arctic Peat Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQTYNYIGDMHLKEHHHSSHTLPLDKD
Ga0209538_10958222	3300025846	Arctic Peat Soil	WRNHPYLELEGEALDNHIVAMHGWSMQMVAVKGTQTLAQKYNYIGDMHLKEHHHSSHTLPLDKD
Ga0209538_11322492	3300025846	Arctic Peat Soil	LCGEGEFLMAMDKWRNHPYLELEGEALDVHMMVMHGWSMQMVAVKGAQTLAQKHNYIGAMHLKELYRSSHTLPLDKD
Ga0209124_103528631	3300025852	Arctic Peat Soil	MVKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGDMHHREQTVPPHAVPVDED
Ga0209176_100702032	3300025854	Arctic Peat Soil	MVRAKGRNHPYLELEGEAIDNHMMAMHGWSMQMVAVKGTQTLAQKYNYIGEMHRREHHLP
Ga0209585_104229861	3300025891	Arctic Peat Soil	LCGGELLMATAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGAMHLKEHHR
Ga0209840_11118492	3300026223	Soil	LCGEGEFLMAMAKWRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQKHNYIGDMHLKEHHHSSHTLPLDKD
Ga0209880_10011904	3300026271	Soil	MVRAKGRNHPYLELEGEALDNHMMAMHGWSMQMVAVKGTQTLAQTYNYIGDMHRREHHLPPHAVPVDED
Ga0209881_10868831	3300026273	Soil	LCGKGEFLMAMDKWRNHPYLELEGEALDVHMMVMHGWSMQMVAVKDTQTLAQKHNNIGAMHLKELYRSSHTLPLDKD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102122

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences