Metagenome / Metatranscriptome Family F100417

Overview

Basic Information

• Family ID: F100417
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 102
• Average Sequence Length: 56 residues
• Representative Sequence: MLPVIEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIPHFH
• Number of Associated Samples: 61
• Number of Associated Scaffolds: 102

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Eukaryota
• % of genes with valid RBS motifs: 17.65 %
• % of genes near scaffold ends (potentially truncated): 30.39 %
• % of genes from short scaffolds (< 2000 bps): 99.02 %
• Associated GOLD sequencing projects: 51
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Eukaryota (66.667 % of family members)
• NCBI Taxonomy ID: 2759
• Taxonomy: All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (52.941 % of family members)
• Environment Ontology (ENVO): Unclassified (59.804 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (63.725 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 45.45%
  β-sheet: 0.00%
  Coil/Unstructured: 54.55%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13659	Obsolete Pfam Family	0.98

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Level 3

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	66.67 %
Unclassified	root	N/A	33.33 %

Level 4

Name	Rank	Taxonomy	Distribution
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	66.67 %
Unclassified	root	N/A	33.33 %

Level 5

Name	Rank	Taxonomy	Distribution
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	66.67 %
Unclassified	root	N/A	33.33 %

Level 6

Name	Rank	Taxonomy	Distribution
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	66.67 %
Unclassified	root	N/A	33.33 %

Level 7

Name	Rank	Taxonomy	Distribution
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	66.67 %
Unclassified	root	N/A	33.33 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	26.47 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	26.47 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300005941|Ga0070743_10034947	Not Available	1729
3300005941|Ga0070743_10214142	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	630
3300005942|Ga0070742_10151692	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	644
3300007544|Ga0102861_1160491	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	612
3300007548|Ga0102877_1119078	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	750
3300007550|Ga0102880_1070147	Not Available	928
3300007554|Ga0102820_1080328	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	784
3300007554|Ga0102820_1110640	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	660
3300007557|Ga0102821_1055990	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1021
3300007557|Ga0102821_1112020	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	694
3300007634|Ga0102901_1207303	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	551
3300007639|Ga0102865_1161049	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	671
3300007642|Ga0102876_1097733	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	797
3300007658|Ga0102898_1044367	Not Available	1001
3300007661|Ga0102866_1171280	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	554
3300007667|Ga0102910_1090119	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	709
3300007681|Ga0102824_1147325	Not Available	619
3300007692|Ga0102823_1088056	Not Available	824
3300007692|Ga0102823_1143136	Not Available	635
3300007706|Ga0102899_1074693	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	817
3300007715|Ga0102827_1076272	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	754
3300007716|Ga0102867_1124304	Not Available	693
3300007864|Ga0105749_1019715	Not Available	1209
3300007972|Ga0105745_1153358	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	707
3300007992|Ga0105748_10135316	Not Available	1003
3300008510|Ga0110928_1105123	Not Available	592
3300008995|Ga0102888_1024112	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1134
3300008996|Ga0102831_1122585	Not Available	864
3300008996|Ga0102831_1144121	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	790
3300008996|Ga0102831_1223907	Not Available	621
3300008996|Ga0102831_1232846	Not Available	608
3300009024|Ga0102811_1163957	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	831
3300009024|Ga0102811_1167411	Not Available	822
3300009056|Ga0102860_1080446	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	895
3300009057|Ga0102892_1084397	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	613
3300009059|Ga0102830_1094936	Not Available	886
3300009075|Ga0105090_10425122	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	809
3300009075|Ga0105090_10556957	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	696
3300009075|Ga0105090_10599668	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	669
3300009075|Ga0105090_10705658	Not Available	613
3300009075|Ga0105090_10910297	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	536
3300009079|Ga0102814_10061580	Not Available	2069
3300009079|Ga0102814_10210545	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1059
3300009079|Ga0102814_10416665	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	731
3300009079|Ga0102814_10450907	Not Available	700
3300009079|Ga0102814_10835222	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	510
3300009080|Ga0102815_10110126	Not Available	1506
3300009080|Ga0102815_10212180	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1065
3300009080|Ga0102815_10285114	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	912
3300009080|Ga0102815_10308989	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	875
3300009080|Ga0102815_10349165	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	820
3300009081|Ga0105098_10165926	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1001
3300009081|Ga0105098_10315825	Not Available	754
3300009081|Ga0105098_10335896	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	735
3300009081|Ga0105098_10779096	Not Available	515
3300009081|Ga0105098_10816292	Not Available	505
3300009086|Ga0102812_10208789	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1064
3300009086|Ga0102812_10308102	Not Available	861
3300009086|Ga0102812_10420145	Not Available	728
3300009086|Ga0102812_10673174	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	569
3300009141|Ga0102884_1096487	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	743
3300009165|Ga0105102_10163388	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1093
3300009165|Ga0105102_10366578	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	759
3300009169|Ga0105097_10518003	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	668
3300009169|Ga0105097_10527329	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	662
3300009169|Ga0105097_10857892	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	520
3300009466|Ga0126448_1030008	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1284
3300009474|Ga0127390_1142584	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	612
3300009530|Ga0129361_102252	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	767
3300009911|Ga0132221_1001962	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1124
3300022360|Ga0210373_106276	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	581
3300024239|Ga0247724_1031660	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	771
3300024239|Ga0247724_1058820	Not Available	577
3300024346|Ga0244775_10372581	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1176
3300024346|Ga0244775_11276698	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	569
3300024346|Ga0244775_11414700	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	534
3300027188|Ga0208921_1025364	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	901
3300027190|Ga0208674_1018800	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1090
3300027192|Ga0208673_1055457	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	632
3300027192|Ga0208673_1066468	Not Available	567
3300027197|Ga0208922_1051355	Not Available	699
3300027198|Ga0208163_1028578	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	928
3300027248|Ga0208176_1044440	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	573
3300027416|Ga0207994_1125127	Not Available	515
3300027525|Ga0208437_1123176	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	589
3300027571|Ga0208897_1079461	Not Available	847
3300027753|Ga0208305_10128925	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	936
3300027885|Ga0209450_10406433	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	993
3300034019|Ga0334998_0357038	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	851
3300034019|Ga0334998_0390265	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	802
3300034066|Ga0335019_0612756	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	636
3300034066|Ga0335019_0748869	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	556
3300034066|Ga0335019_0858377	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	508
3300034072|Ga0310127_115429	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1123
3300034072|Ga0310127_224623	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	682
3300034072|Ga0310127_333103	Not Available	509
3300034073|Ga0310130_0247071	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	561
3300034073|Ga0310130_0264481	Not Available	543
3300034073|Ga0310130_0267659	Not Available	540
3300034112|Ga0335066_0657360	Not Available	535
3300034200|Ga0335065_0826595	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	517
3300034682|Ga0310128_060634	Not Available	779

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	91.18%
Terrestrial	Environmental → Terrestrial	8.82%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	63.73%
Freshwater	Environmental → Aquatic → Freshwater	25.49%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	8.82%
Unclassified	Environmental → Aquatic → Unclassified	1.96%

Type

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	52.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	14.71%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	8.82%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.84%
Lake	Environmental → Aquatic → Freshwater → Lake	6.86%
Coastal	Environmental → Aquatic → Marine → Coastal	2.94%
Pond	Environmental → Aquatic → Freshwater → Pond	1.96%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	1.96%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.98%

Subtype

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	52.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	14.71%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	8.82%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.84%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.98%

Habitat

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	52.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	14.71%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	7.84%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.86%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	6.86%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.94%
Meromictic Pond	Environmental → Aquatic → Freshwater → Pond → Unclassified → Meromictic Pond	1.96%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	1.96%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.96%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.98%
Water Bodies	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Water Bodies	0.98%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental
3300005942	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757	Environmental
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental
3300007548	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3	Environmental
3300007550	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3	Environmental
3300007554	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709	Environmental
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental
3300007642	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3	Environmental
3300007658	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-3	Environmental
3300007661	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3	Environmental
3300007667	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3	Environmental
3300007681	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753	Environmental
3300007692	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743	Environmental
3300007706	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3	Environmental
3300007715	Estuarine microbial communities from the Columbia River estuary - metaG S.751	Environmental
3300007716	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3	Environmental
3300007864	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461B_3.0um	Environmental
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental
3300008510	Microbial Communities in Water bodies, Singapore - Site RA	Environmental
3300008995	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-3	Environmental
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental
3300009057	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-3	Environmental
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental
3300009141	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-3	Environmental
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental
3300009466	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 2m depth; DNA IDBA-UD	Environmental
3300009474	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 3m depth; DNA IDBA-UD	Environmental
3300009530	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 4m depth; RNA IDBA-UD	Environmental
3300009911	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 6, surface; RNA IDBA-UD	Environmental
3300022360	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.763 (Metagenome Metatranscriptome)	Environmental
3300024239	Subsurface sediment microbial communities from gas well in Oklahoma, United States - OK STACK MC-2-E	Environmental
3300024346	Whole water sample coassembly	Environmental
3300027188	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 (SPAdes)	Environmental
3300027190	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733 (SPAdes)	Environmental
3300027192	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715 (SPAdes)	Environmental
3300027197	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743 (SPAdes)	Environmental
3300027198	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753 (SPAdes)	Environmental
3300027248	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3 (SPAdes)	Environmental
3300027416	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757 (SPAdes)	Environmental
3300027525	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705 (SPAdes)	Environmental
3300027571	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)	Environmental
3300027753	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)	Environmental
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental
3300034072	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-A	Environmental
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental
3300034682	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-4-A	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070743_100349473	3300005941	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDGSAAHRDDSSTSTASSGTVEIDHFH*
Ga0070743_102141422	3300005941	Estuarine	KSAANFAAMLPVIEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIPHFH*
Ga0070742_101516922	3300005942	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDVSAVHRDDSDASTASSGTVEIPHFH*
Ga0102861_11604912	3300007544	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIGHFN*
Ga0102877_11190782	3300007548	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIPHFH*
Ga0102880_10701471	3300007550	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDISAAHRDDSDASTASSGTVEIPHFH*
Ga0102820_10803281	3300007554	Estuarine	VAVGIINRFLARLEHECPDGSAAHRDDSSTSTASSGTVEIDHFH*
Ga0102820_11106402	3300007554	Estuarine	MLPILEAIIAGLIVGAANRLLARLEHECPEVRAEMRRDDSGSSTASSGTVEIGHFN*
Ga0102821_10559902	3300007557	Estuarine	MLPILEAILAGLIVGAANRLLARLEHECPEVRAEMRRDDSGSSTASSGTVEIPHFH*
Ga0102821_11120202	3300007557	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECHNVSAAHRDDSDASTASSGTVEIGHFH*
Ga0102901_12073031	3300007634	Estuarine	HKQKSAANFAAMLPVIEALLAGVAVGIINRFLARLEHECPDVSAVHRDDSDASTASSGTVEIPHFH*
Ga0102865_11610492	3300007639	Estuarine	MLPVIEALLAGVAVGIINRFLARSEHECPDVSVAHRDDSDASTASSGTVEIPHFH*
Ga0102876_10977332	3300007642	Estuarine	IAGLIVGAANRLLARLEHECPEVRAQMHRDDSASSTASSGTVEIGHFN*
Ga0102898_10443672	3300007658	Estuarine	MLPVIEALLAGMAVGIINRFLARLEHECPDVSAAHRDDSHASTASSGTVEIPHFQ*
Ga0102866_11712801	3300007661	Estuarine	LLAGVAVGIINRFLARLEHECPDGSAAHRDDSDASTASSGTVEIPHFH*
Ga0102910_10901192	3300007667	Estuarine	MLPVIEALLAGVAVGIINRFLARLEQECPDVSAAHRDDSDASTASSGTVEIPHFH*
Ga0102824_11473252	3300007681	Estuarine	MLPILEAILAGLIVGAANRLLARLEHECPEVRAEMRRDDSGSSTASSGTVEIP
Ga0102823_10880561	3300007692	Estuarine	MLPVIEALVAGVAVGIINRFLARLEAQCPDAEIHRDDSDASTASSGTVEIPHF*
Ga0102823_11431361	3300007692	Estuarine	MLPILEAIIAGLIVGAANRLLARLEHECPEAHAQMHRDDSSTTTASSGTVEILHFH*
Ga0102899_10746932	3300007706	Estuarine	MLPVIEPLLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIPHFH*
Ga0102827_10762722	3300007715	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDGSAAHRDDSDASTASSGTVEIGHFH*
Ga0102867_11243041	3300007716	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDVSVAQRDDSDASTASSGTVEIPHFH*
Ga0105749_10197151	3300007864	Estuary Water	MLPVIEALLAGVAVGIINRFLARLEHDCPSTAVHRDDSSTSTASSGTVEIGHFH*
Ga0105745_11533582	3300007972	Estuary Water	LPVIEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIPHFH*
Ga0105748_101353162	3300007992	Estuary Water	MLPVIEALLAGVAVGIINRFLARLEHECPDTASTAAHRDDSSTSTASSGTVEIDHFH*
Ga0110928_11051231	3300008510	Water Bodies	MLPVLEAMIAGVLVGILNRALARLEAQCPEDVREEMRRDDSSSSTASSGTVEIPHFH*
Ga0102888_10241122	3300008995	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDVSVAHRDDSDASTASSGTVEIPHFH*
Ga0102831_11225852	3300008996	Estuarine	MLLVIEALLAGVAVGIINRFLARLEHECPDTASVHRDDSSTSTASSGTVEIGHFH*
Ga0102831_11441211	3300008996	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECHDVSTPRNDSDASTASSGTVEIGHFH*
Ga0102831_12239072	3300008996	Estuarine	VIEALLAGVAVGIINRFLARIEAQCPETEIRDDSSTSTASSGTVEIQHI*
Ga0102831_12328462	3300008996	Estuarine	MLPILEAIIAGLIVGAANRLLARLEHECPEVAEMRREDSASSTASSGTVEIPHF*
Ga0102811_11639571	3300009024	Estuarine	MLPVIEALLAGVAVGIINRFLARLEYECPDVSVAHRDDSDASTASSGTVEIPHFH*
Ga0102811_11674112	3300009024	Estuarine	MLPVIEALLAGVAVGIINRFLARIEAQCPDAEIHRDDSDASTASSGPVEIPHF*
Ga0102860_10804462	3300009056	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDAASTAVHRDDSDASTASSGTVEIPHFH*
Ga0102892_10843971	3300009057	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDTANTAVHRDDSSTSTASSGTVEIDHFH*
Ga0102830_10949362	3300009059	Estuarine	MLPVIEALLAGVAVGIINRFLARIEAQCPETEIRDDSSVSTASSGTVEIPHF*
Ga0105090_104251222	3300009075	Freshwater Sediment	MLPVLEALLAGVAVGIINRFLARLEAQCPEDVRAEIHRDDSGSSTASSGTVEISHFH*
Ga0105090_105569572	3300009075	Freshwater Sediment	LPVLEAMVAGILVGFFNRMLARLEQECPEDIRREMHRDDSSTSTASSGTVELPHFH*
Ga0105090_105996681	3300009075	Freshwater Sediment	MLPVLEAMVAGILVGFINRLLARLEQECPEDTRRDRDDSSTSTASSGTVEIPHFQ*
Ga0105090_107056582	3300009075	Freshwater Sediment	VQKTAVKFAAMLPIIEAMLAGVAVGIIKRLLARFEVQCPEDIRREMHRDDSSTSTASSGTVELPHFH*
Ga0105090_109102972	3300009075	Freshwater Sediment	MLPILEAMLAGVAVGIINRLLARLEVQCPEEIREEMRRDDSSSSTASSGTVEIPHFH*
Ga0102814_100615802	3300009079	Estuarine	MLPVIEALLAGVAVGIINRFLARLEAQCPDAEIHRDDSDASTASSGTVEIPHF*
Ga0102814_102105451	3300009079	Estuarine	ALLAGVAVGIINRFLARLEHECPDISAHRDDSDASTASSGTVEIGHFQ*
Ga0102814_104166651	3300009079	Estuarine	ANFAAMLPVIEALLAGVAVGIINRFLARLEHECPDVSAVHRDDSDASTASSGTVEIGHFH
Ga0102814_104509072	3300009079	Estuarine	MLPILEAIIAGLIVGAANRLLARLEHECPEVRAEMRRDDSGSSTASSGTVEIPHFH*
Ga0102814_108352222	3300009079	Estuarine	MLPILEAMLAGVAVGIINRLLARLEHECPEVRAEMRRDDSGSSTASSGTVEIPHFH*
Ga0102815_101101262	3300009080	Estuarine	MLPVIEALLAGVAVGIINRFLARIEAQCPDAEIHRDDSDASTASSGTVEIPHF*
Ga0102815_102121801	3300009080	Estuarine	ALLAGVAVGIINRFLARLEHECPDGSAAHRDDSSTSTASSGTVEIDHFH*
Ga0102815_102851142	3300009080	Estuarine	YWTKSKERAANFAAMLPVIEALLAGVAVGIINRFLARLEHECPDTASTAVHRDDSSTSTASSGTVEIGHFH*
Ga0102815_103089891	3300009080	Estuarine	MLPILEAIIAGLIVGAANRLLARLEHECPEVRAQMYRDDSGSSTASSGTMEIPHF*
Ga0102815_103491651	3300009080	Estuarine	VAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIGHFH*
Ga0105098_101659262	3300009081	Freshwater Sediment	MLPVLEAMLAGVAVGIINRLLARLEVQCPEDIREEMRRDDSSSSTASSGTVEIPHFH*
Ga0105098_103158252	3300009081	Freshwater Sediment	MLPVLEAMLAGVAVGIINRLLARLEAQCPEDVREEMRRDDSSSSTASSGTVEIPHFH*
Ga0105098_103358962	3300009081	Freshwater Sediment	MLPVLEALLAGVAVGIINRFLARLEAHCPEDIRAEVHRDDSDTSTASSGTVEIPHF*
Ga0105098_107790961	3300009081	Freshwater Sediment	MLPVIEALLAGVAVGIINRFLARLETQCPADIRAEIHRDDSGSSTASSGTVELSHFAG*
Ga0105098_108162922	3300009081	Freshwater Sediment	MLPVLEALLAGVAVGIINRFLARLEAQCPEDLRAEIHRDDSGSSTASSGTVEITHFH*
Ga0102812_102087892	3300009086	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDGSVAHRDDSSTSTASSGTVEIDHFH*
Ga0102812_103081021	3300009086	Estuarine	MLPVIKALLAGVAVGIINRFLARLEHECPDTASTAAHRDDSSTSTASSGTVEIDHFH
Ga0102812_104201451	3300009086	Estuarine	MLLVIEALLAGVAVGIINRFLARLEHECPDAASTAAHRDDSSSSTASSGTVEIGHFH
Ga0102812_106731742	3300009086	Estuarine	MLPILEAIIAGLIVGAANRLLARLEQECPEVRAQMHRDDSGSSTASSGTVEIPHFH*
Ga0102884_10964873	3300009141	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIGHFH*
Ga0105102_101633882	3300009165	Freshwater Sediment	MLPVLEAMLAGVAVGIINRLLARLEVQCPEEIREEMRRDDSSSSTASSGTVEIPHFH*
Ga0105102_103665782	3300009165	Freshwater Sediment	MLPVIEAMVAGVLVGFINRLLARLEQECPEDIRRELHRDDSSTSTASSGTVEMPHFH*
Ga0105097_105180032	3300009169	Freshwater Sediment	MLPILEAMLAGVTVGIINRLLARLEVQCPEDIREEMRRDDSSSSTASSGAVEIPHFH*
Ga0105097_105273291	3300009169	Freshwater Sediment	KERTAANFAAMLPILEAMLAGVAVGFINRLLARLEQECPEDIRREMHRDDSSTSTASSGTVELPHFH*
Ga0105097_108578922	3300009169	Freshwater Sediment	MLPVLEALLAGVAVGIINRFLARLEAHCPEDIRAEVHRDDSDASTASSGTVEIPHF*
Ga0126448_10300082	3300009466	Meromictic Pond	FAAMLPVIEALLAGVAVGIINRFLARLEHECPDVSAVHRDDSDASTASSGTVEIPHFH*
Ga0127390_11425842	3300009474	Meromictic Pond	MVPILEAILAGLIVGAANRLLARLEHECPEVAEMRRDDSASSTASSGTVEIPHF*
Ga0129361_1022522	3300009530	Meromictic Pond	MLPVIEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIPHSH*
Ga0132221_10019623	3300009911	Meromictic Pond	FAAMLPVIEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIGHFH*
Ga0210373_1062762	3300022360	Estuarine	SRLREKSAANFVAMLPVIEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIPHFH
Ga0247724_10316602	3300024239	Deep Subsurface Sediment	MLPVLEAMLAGVAVGIINRLLARLEVQCPEDIRQEMRRDDSSSSTASSGTVEIPHFH
Ga0247724_10588202	3300024239	Deep Subsurface Sediment	MLPVIEALLAGVAVGIINRFLARLETQCPADIRAEIHRDDSGSSTASSGTV
Ga0244775_103725812	3300024346	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIGHFH
Ga0244775_112766982	3300024346	Estuarine	KKEPQTKSAANFAAMLPVIEALLAGVAVGIINRFLARLEHECPDISAAHRDDSDASTASSGTVEIGHFH
Ga0244775_114147002	3300024346	Estuarine	MLPVVEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIPHFH
Ga0208921_10253642	3300027188	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIPHFH
Ga0208674_10188002	3300027190	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDVSAVHRDDSDASTASSGTVEIGHFH
Ga0208673_10554571	3300027192	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDVSAVHRDDSDASTASSGTVEIPHFH
Ga0208673_10664681	3300027192	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDGSAAHRDDSDASTASSGTVEIGHFH
Ga0208922_10513551	3300027197	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDGSAAHRDDSSTSTASSGTVEIDHFH
Ga0208163_10285781	3300027198	Estuarine	AGVAVGIINRFLARLEHECPDVSAVHRDDSDASTASSGTVEIPHFH
Ga0208176_10444402	3300027248	Estuarine	MLPVIEALLAGVAVGIINRFLARLEQECPDVSAAHRDDSDASTASSGTVEIPHFH
Ga0207994_11251271	3300027416	Estuarine	MLPVIEALLAGVAVGIINRFLARLEHECPDVSAVHRDDSDASTASSGTVEIPHFQ
Ga0208437_11231762	3300027525	Estuarine	AGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIPHFH
Ga0208897_10794612	3300027571	Estuarine	MLPVIEALLAGVAVGIINRFLARIEAQCPDAEIHRDDSDASTASSGTVEIPHF
Ga0208305_101289251	3300027753	Estuarine	QKSAANFAAMLPVIEALLAGVAVGIINRFLARLEHECPDVSAAHRDDSDASTASSGTVEIGHFH
Ga0209450_104064332	3300027885	Freshwater Lake Sediment	MLPVLEAMLAGVAVGIINRLLARLEVQCPEDIREEMRRDDSSSSTASSGTVEIPHFH
Ga0334998_0357038_654_824	3300034019	Freshwater	MLPVLEALLAGVAVGIINRFLSRLEAQCPEDIRAEVHRDDSDASTASSGTVEIPHF
Ga0334998_0390265_511_684	3300034019	Freshwater	MLPVLEAMVAGVLVGFINRLLARLEQECPEDIRRELHRDDSSTSTASSGTVEMPHFQ
Ga0335019_0612756_129_299	3300034066	Freshwater	MLPVLEALLAGVAVGIINRFLARLEAQCPEDIRAEVHRDDSDASTASSGTVEIPHF
Ga0335019_0748869_74_247	3300034066	Freshwater	MLPVIEAMVAGVLVGFINRLLARLEQECPEDIRREMHRDDSSTSTASSGTVEMPHFH
Ga0335019_0858377_78_251	3300034066	Freshwater	MLPVIEAMVAGVLVGFINRLLARLEQECPEDIRREMHRDDSSTSTASSGTVELPHFH
Ga0310127_115429_12_164	3300034072	Fracking Water	MLAGVAVGIINRLLARLEVQCPEDIREEMRRDDSSSSTASSGTVEIPHFH
Ga0310127_224623_370_546	3300034072	Fracking Water	MLPVLEALLAGVAVGIINRFLARLEAQCPADIRAEIHRDDSSASSTASSGTVEMSHFH
Ga0310127_333103_314_487	3300034072	Fracking Water	MLPVLEAMIAGVAVGIINRLLARLEVQCPEDIRQEMRRDDSSSSTASSGTVEIPHFH
Ga0310130_0247071_119_289	3300034073	Fracking Water	MLPVLEAILAGLIVGAANRLLARLEQECPEIREQLHRDDSGSSTASSGTVEIAHFH
Ga0310130_0264481_2_163	3300034073	Fracking Water	MLPVLEAMLAGVAVGIINRLLARLEAQCPEDVREEMRRDDSSSSTASSGTVEIP
Ga0310130_0267659_73_246	3300034073	Fracking Water	MLPIIEAMLAGVAVGIINRLLARFEVQCPEDIRREMHRDDSSTSTASSGTVELPHFH
Ga0335066_0657360_383_535	3300034112	Freshwater	MLPVIEAMVAGVLVGFINRLLARLEQECPEDIRREMHRDDSSTSTASSGTV
Ga0335065_0826595_1_165	3300034200	Freshwater	VLEALLAGVAVGIINRFLARLEAQCPEDIRSEIHRDDSSASTASSGTVEMSHFH
Ga0310128_060634_627_779	3300034682	Fracking Water	MLPVLEAMLAGVAVGIINRLLARLEVQCPEDIREEMRRDDSSSSTASSGTV